Lcy09g012260 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g012260
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description60S ribosomal protein L30-like
LocationChr09: 13391637 .. 13394056 (+)
RNA-Seq ExpressionLcy09g012260
SyntenyLcy09g012260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCCCCGCCACCCCTTGTCGTGGAAAAGCTTCAGCACAGGGTAAGGGATGATTCAAACCCTAATTTGAGACATTTTCCCATAACATAACATCTGAAGATTTTGATTGTCTTTCATCTCTGATTCTTCCTGTTTCTTCATTCCTTTAAGGATTTTAAACACCTTTTGAGCAGCGACGATGGCGCCGGCGAAGAAGACTGTAAGTATCACTAACTGTTCATAAATGTCGCTCTTCTAATTACTTTAGGGATAATTGTTTTGATGATCTTTGATATTGTAATTGCAGAAGAAGACTCATGAGAGCATTAACAACAGGCTCGCCCTCGTGATGAAGAGCGGCAAGTACACGCTGGGGTACAAAACCGTCCTTCGCACTATCCGCAGTTCCAAAGGTCTTCATTCGTCGTTCTCCCTTTCCGAGAAATCTTGTTGCTTATTACCTTATGGTGTTTGATTCAATTTTAGGTTTTGTTTATGTGCTTTTGACATTTTTCGGGTTTTCGATATGAGAAAATACAGGGAAGCTTATTATTCTATCTAACAACTGCCCGCCTCTGCGTAAATCCGAAATCGAGTACTACGCAATGCTTGCTAAAGTTGGGGTTCATCACTACAACGGAAGTAAGTATAGTGCAAACTCTGCTTTGTTAGTTTGTTGTTTATATGTCCAAGTTGCAAGCAGGGTTTTGTGATTTATGATATTAGAACTTCGTATGCAGGATTTCAGATACATGAGACATAACTAATATCTTTTCTTGCAGTGCGTTGTATTTCATCATCTTAGAAAAAGAAATCTAGTTAGTAAATTTAGCACAATCAATTCCAAATTAGAGATAGCTTATTGCAGTATCCGGGAAAGAAGTTATTATCTTTGGAAGTGTTGGTTGATTGTATAATTGAGTAAGTTGATCGATTAGGTAACGGCCGAGTATTCTGCTACTAAGAATACTTAGCCATGAGCTAAATGAATATGACATTCAGTGTTTAATTCATCCTGACTGGAATCTTTATTGAAGTATTTGTAAAAAATTGGTGGTTCTTTCATACTTTCCTATAGATTTGTTACTGTCATCCTCTAGGTGTTTTTTTTTAATCTTTTGTATAAATCTATTTAGGAAATAGGTGGGTTGCTTCTATTGATAGCGTTCTTACTGATAATATTAGTGTAGGATAGCCCGTTTTAAATTTGCATTAATTAGTGGGTTCATGCTCGGTCAATTTGCCTTACCTTCTGTGTATCTTCTTATACAATTATTTGTATGTTTTGTTTCTTCTGTCTTACATATTATTTTTGTAATTTTGGCCTACATTTAGGCAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTTCCGCGTCTCCTGCCTCAGCATTATCGACCCAGGTACTACAAATTCTTTTTTTGGTTTCTGAAATTTTATGTTTATTTCTTTGCGGTCCTTAGGTTTTGAACATCTCATTCTAGTTCTTGAAGTTTGCATAAAAAAATATTTTAGTTCTTATGCTTATCTTTTGTTTAGTTATTTAACAAAAACTTCATAATTGTCATGAAGTTTGCGAGTAGTTTCTATGTGAACGAGTTTTCGAGAGAACTCAGGTAGTCAGTTAGGTCTTTGGTTTCAAAGCCTATTTAGAACTTTGTTAAATATATTTAAAAAAATGATGCCAAGGGCTAAATTTTCTTTTGAAAGTGAAGATTAGAAATTACAACGTACATAACATTTTGAAGGTTGTGACTAAAATAAAACATCTGTTAGTCTAGAAATGAAGGCTGAAATATTTTAGAACTTTGAGTTGTCTAATACTTATTTTTATTATCGTCGAGCTAGGGTCACTTTGGTGAGTTGTCTGATACTTATCTTTTATAGATTGAGTTTACAAAGTCTTCTACTATTCTATTCTTGTCTTTTATTGATTGGTCTTACTAAGTCTCTTGTTATTCTATTCTTTTCCAGGTGACTCTGATATTATCAAATCGCTTCCTGGTGATCAGTGATTACTTTAGAACGTTATCTTTTTTGTGACATCTTCTCTCTTCAGGAAACGTTAGAATTGATTTTTTTTTCAATATCCTCAGAATAGCACCCTACTTTCTGCCGTATAATTTTATGTCGATAACCAGATTTTGTCAATGTTTTTGAAGTTTTGTTTAGTTGAGACATGGCCTTAAGTAGACTGTTCAAGTAGTTTCATATCTATTTATGCCTAAACAATGAAGAATGAGATTAAGGTGCATGTTTGGAATGACTTTTTAATTATTTATAAACACTTTGTTTTTGCACTTGCAAATACTTTTTTAAACATGTCATTCCAAATAGACTCTAAGTTTATTTGAGATGTTTTCAGCACTGTGGTTTTACTTAGTTGAGGTTTTGGAGTTGGTGTAATTATACTCGTGATTTATATGTATATATATGTGGATA

mRNA sequence

CGCCCCGCCACCCCTTGTCGTGGAAAAGCTTCAGCACAGGGATTTTAAACACCTTTTGAGCAGCGACGATGGCGCCGGCGAAGAAGACTAAGAAGACTCATGAGAGCATTAACAACAGGCTCGCCCTCGTGATGAAGAGCGGCAAGTACACGCTGGGGTACAAAACCGTCCTTCGCACTATCCGCAGTTCCAAAGGGAAGCTTATTATTCTATCTAACAACTGCCCGCCTCTGCGTAAATCCGAAATCGAGTACTACGCAATGCTTGCTAAAGTTGGGGTTCATCACTACAACGGAAGCAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTTCCGCGTCTCCTGCCTCAGCATTATCGACCCAGGTGACTCTGATATTATCAAATCGCTTCCTGGTGATCAGTGATTACTTTAGAACGTTATCTTTTTTGTGACATCTTCTCTCTTCAGGAAACGTTAGAATTGATTTTTTTTTCAATATCCTCAGAATAGCACCCTACTTTCTGCCGTATAATTTTATGTCGATAACCAGATTTTGTCAATGTTTTTGAAGTTTTGTTTAGTTGAGACATGGCCTTAAGTAGACTGTTCAAGTAGTTTCATATCTATTTATGCCTAAACAATGAAGAATGAGATTAAGGTGCATGTTTGGAATGACTTTTTAATTATTTATAAACACTTTGTTTTTGCACTTGCAAATACTTTTTTAAACATGTCATTCCAAATAGACTCTAAGTTTATTTGAGATGTTTTCAGCACTGTGGTTTTACTTAGTTGAGGTTTTGGAGTTGGTGTAATTATACTCGTGATTTATATGTATATATATGTGGATA

Coding sequence (CDS)

ATGGCGCCGGCGAAGAAGACTAAGAAGACTCATGAGAGCATTAACAACAGGCTCGCCCTCGTGATGAAGAGCGGCAAGTACACGCTGGGGTACAAAACCGTCCTTCGCACTATCCGCAGTTCCAAAGGGAAGCTTATTATTCTATCTAACAACTGCCCGCCTCTGCGTAAATCCGAAATCGAGTACTACGCAATGCTTGCTAAAGTTGGGGTTCATCACTACAACGGAAGCAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTTCCGCGTCTCCTGCCTCAGCATTATCGACCCAGGTGACTCTGATATTATCAAATCGCTTCCTGGTGATCAGTGA

Protein sequence

MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ
Homology
[Close]
BLAST of Lcy09g012260 vs. ExPASy Swiss-Prot
Match: O49884 (60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.3e-54
Identity = 100/112 (89.29%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           M  AKKTKKTHESINNRLALVMKSGKYTLGYKTVL+++RSSKGKLII++NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAKVGVHHYNG+NVDLGTACGKY+RV CLSI+DPGDSDIIK+LPGDQ
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. ExPASy Swiss-Prot
Match: Q9C8F7 (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 6.2e-52
Identity = 96/112 (85.71%), Postives = 108/112 (96.43%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           M  AKKTKK+HE IN+RLALVMKSGKYTLGYK+VL+++RSSKGKLI++S+NCPPLR+SEI
Sbjct: 1   MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAKVGVHHYN +NVDLGTACGKYFRVSCLSI+DPGDSDIIKSLPGDQ
Sbjct: 61  EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. ExPASy Swiss-Prot
Match: Q9M5M6 (60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-51
Identity = 97/111 (87.39%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           M  AKKTKKTHESIN+RLALVMKSGK+TLGYKTVL ++RS+KGKLII++NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGD 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKYFRV CLSIID GDSDIIKS+PGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGD 111

[Close]
BLAST of Lcy09g012260 vs. ExPASy Swiss-Prot
Match: Q8VZ19 (60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.8e-51
Identity = 94/112 (83.93%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           M   KKTKK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S NCPPLR+SEI
Sbjct: 1   MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAKVGVHHYNG+NVDLGTACGKYFRVSCLSI+DPGDSDIIKS+PGDQ
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. ExPASy Swiss-Prot
Match: Q9LSA3 (60S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-50
Identity = 93/112 (83.04%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           M   KK KK+HE IN+RLALVMKSGKYTLGYK+VL+++RSSKGKLI++S+NCPPLR+SEI
Sbjct: 1   MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAKVGVH YNG+NVDLGTACGKYFRVSCLSI+DPGDSDIIK+LPGDQ
Sbjct: 61  EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. ExPASy TrEMBL
Match: A0A5D3DSZ7 (60S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002180 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.3e-56
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAK+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. ExPASy TrEMBL
Match: A0A6J1JWW8 (60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.3e-56
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAK+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. ExPASy TrEMBL
Match: A0A6J1FH91 (60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.3e-56
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAK+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. ExPASy TrEMBL
Match: A0A1S3CCQ4 (60S ribosomal protein L30-like OS=Cucumis melo OX=3656 GN=LOC103499296 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.3e-56
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAK+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. ExPASy TrEMBL
Match: A0A0A0KQ98 (Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G409620 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-55
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAK+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. NCBI nr
Match: XP_008460497.1 (PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S ribosomal protein L30-like [Cucurbita moschata] >XP_022992865.1 60S ribosomal protein L30-like [Cucurbita maxima] >XP_023549693.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_023549694.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_038906736.1 60S ribosomal protein L30-like [Benincasa hispida] >KAA0062391.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa] >KAG6579016.1 60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016539.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma] >TYK26589.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa])

HSP 1 Score: 226.9 bits (577), Expect = 8.8e-56
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAK+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. NCBI nr
Match: XP_022141723.1 (60S ribosomal protein L30-like [Momordica charantia])

HSP 1 Score: 225.3 bits (573), Expect = 2.6e-55
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           MA AKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. NCBI nr
Match: XP_004140311.1 (60S ribosomal protein L30 [Cucumis sativus] >KGN51019.1 hypothetical protein Csa_008795 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 2.6e-55
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAK+GVHHYNGSNVDLGTACGKY+RVSCLSIIDPGDSDIIKSLPGDQ
Sbjct: 61  EYYAMLAKIGVHHYNGSNVDLGTACGKYYRVSCLSIIDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. NCBI nr
Match: KAG6602049.1 (60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224.6 bits (571), Expect = 4.4e-55
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI
Sbjct: 34  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 93

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP +Q
Sbjct: 94  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPSEQ 145

[Close]
BLAST of Lcy09g012260 vs. NCBI nr
Match: XP_022952815.1 (60S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >KAG7032743.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224.6 bits (571), Expect = 4.4e-55
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI
Sbjct: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP +Q
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPSEQ 112

[Close]
BLAST of Lcy09g012260 vs. TAIR 10
Match: AT1G36240.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 204.5 bits (519), Expect = 4.4e-53
Identity = 96/112 (85.71%), Postives = 108/112 (96.43%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           M  AKKTKK+HE IN+RLALVMKSGKYTLGYK+VL+++RSSKGKLI++S+NCPPLR+SEI
Sbjct: 1   MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAKVGVHHYN +NVDLGTACGKYFRVSCLSI+DPGDSDIIKSLPGDQ
Sbjct: 61  EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. TAIR 10
Match: AT1G77940.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-52
Identity = 94/112 (83.93%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           M   KKTKK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S NCPPLR+SEI
Sbjct: 1   MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAKVGVHHYNG+NVDLGTACGKYFRVSCLSI+DPGDSDIIKS+PGDQ
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGDQ 112

[Close]
BLAST of Lcy09g012260 vs. TAIR 10
Match: AT3G18740.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-51
Identity = 93/112 (83.04%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60
           M   KK KK+HE IN+RLALVMKSGKYTLGYK+VL+++RSSKGKLI++S+NCPPLR+SEI
Sbjct: 1   MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 113
           EYYAMLAKVGVH YNG+NVDLGTACGKYFRVSCLSI+DPGDSDIIK+LPGDQ
Sbjct: 61  EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDQ 112

The following BLAST results are available for this feature:
BLAST of Lcy09g012260 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O498842.3e-5489.2960S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1[more]
Q9C8F76.2e-5285.71Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A P... [more]
Q9M5M61.1e-5187.3960S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1[more]
Q8VZ191.8e-5183.9360S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1[more]
Q9LSA32.0e-5083.0460S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1[more]
BLAST of Lcy09g012260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DSZ74.3e-5698.2160S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1JWW84.3e-5698.2160S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 ... [more]
A0A6J1FH914.3e-5698.2160S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=... [more]
A0A1S3CCQ44.3e-5698.2160S ribosomal protein L30-like OS=Cucumis melo OX=3656 GN=LOC103499296 PE=3 SV=1[more]
A0A0A0KQ981.2e-5597.32Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G409... [more]
BLAST of Lcy09g012260 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460497.18.8e-5698.21PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S rib... [more]
XP_022141723.12.6e-5599.1160S ribosomal protein L30-like [Momordica charantia][more]
XP_004140311.12.6e-5597.3260S ribosomal protein L30 [Cucumis sativus] >KGN51019.1 hypothetical protein Csa... [more]
KAG6602049.14.4e-5598.2160S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022952815.14.4e-5598.2160S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosoma... [more]
BLAST of Lcy09g012260 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G36240.14.4e-5385.71Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [more]
AT1G77940.11.3e-5283.93Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [more]
AT3G18740.11.4e-5183.04Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 3..107
e-value: 1.9E-53
score: 180.6
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 13..106
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 13..105
e-value: 1.6E-23
score: 82.3
NoneNo IPR availablePANTHERPTHR11449:SF2660S RIBOSOMAL PROTEIN L30-LIKEcoord: 1..112
IPR039109Ribosomal protein L30/YlxQPANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 1..112
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00709RIBOSOMAL_L30E_1coord: 24..48
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 80..100
IPR000231Ribosomal protein L30eHAMAPMF_00481Ribosomal_L30ecoord: 12..109
score: 21.423265

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g012260.1Lcy09g012260.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome