Lcy09g011150 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g011150
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRetrotransposon protein
LocationChr09: 12042982 .. 12044333 (-)
RNA-Seq ExpressionLcy09g011150
SyntenyLcy09g011150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCCGATGAACTAGATCCCCATGAACTAGTGGCCTTATTGACAGCCTTCACCACAACTCAAGCTCAGATTCTCCTACTATTAGATCTATATATGAACGACCATGGAAGAATAGAACACCAATCACCCTACATCCGACACCACATTAGACAATTAGCATTCTTCAGACTTATACACGAGTCTGACTTACGTTGTCGAGAGAGTACAAGGATGGACAGAAGATGTTTTTCCATACTTTGCACGTTATTAAAAACAGTTGCCGGCTTAACCGGTACAGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTTCTTACACATCCTAGCCCACGACGTTAAGAACCGAGTAGTTCGTACGCAGTTCGCTAGGTCTGGGGAGACAGTTTCTAGGCACTTCAACTCCGTCCTTCATGGGGTGTTAGGACTGCATGAAGTTCTTATAAAAAAACCGGAGCCAGTCACGACCTCTTGTACGGATCCGAGGTGGAAATGGTTTCAGGTATAGATCATTATTCATTCAACTTTATCTAAGTTCGGCCTCACTTTTAGTGTCAGAAACGTGAACCACTATTGCCTATACTATGTCGACACAGAATTGTCTTGGTGCATTAGATGGAACATACATCAAGGTCAATGTTAGTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACGAATGTGCTTGCTGTTTGTGATACAAAAGGAGATTTCACATTCGTCCTACCAGGGTGGGAAGGGTCTGCCGCTGATTCTCGAGTTCTTAGAGATGCAATATCACGACCGAACGGACTCAAAGTTCCGAAGGGTAAATAATCAAACATTTTTTCCTTTCACCATACAACCCTTAGGAAGATGTACTAAGTCGATATAACATTCCACAGGATATTATTATCTGTGCGATGCTGGGTACCCTAATGCAGAGGGTTTCCTAGCACCATATAGAGGGGAACGTTACCACCTTTCTGAATGGCGTGGTGCGGGGAATGCACCAACTACTCCAAAAGAATTCTTCAACATGAAGCATTCATCTGCAAGGAATGTCATTGAGAGAGCGTTCGGTTTGTTAAAAGGAAGGTGGGCTATCCTCCGATCGAAATCGTACTATCCAGTTCGAATTCAAGGACGGACCATCGCAGCGTGCTGCTTACTTCACAATCTTATCAACAGGGAGATGGGTGATCGTGAAATTCCCGATGAACTAGATGAGGTGGATTCTGTGTCCGCTACAACTGATGGTGAGAATATTAATTTCATTGAGACTTCGGACGAATGGAGCCGATGGAGAGATGAGTTGGCAGAACAAATGTTTTCGGAATGGGAGTTACGTAATAACTAA

mRNA sequence

ATGGATCCCGATGAACTAGATCCCCATGAACTAGTGGCCTTATTGACAGCCTTCACCACAACTCAAGCTCAGATTCTCCTACTATTAGATCTATATATGAACGACCATGGAAGAATAGAACACCAATCACCCTACATCCGACACCACATTAGACAATTAGCATTCTTCAGACTTATACACGAGTCTGACTTACGTTGTCGAGAGAGTACAAGGATGGACAGAAGATGTTTTTCCATACTTTGCACGTTATTAAAAACAGTTGCCGGCTTAACCGGTACAGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTTCTTACACATCCTAGCCCACGACGTTAAGAACCGAGTAGTTCGTACGCAGTTCGCTAGGTCTGGGGAGACAGTTTCTAGGCACTTCAACTCCGTCCTTCATGGGGTGTTAGGACTGCATGAAGTTCTTATAAAAAAACCGGAGCCAGTCACGACCTCTTGTACGGATCCGAGGTGGAAATGGTTTCAGAATTGTCTTGGTGCATTAGATGGAACATACATCAAGGTCAATGTTAGTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACGAATGTGCTTGCTGTTTGTGATACAAAAGGAGATTTCACATTCGTCCTACCAGGGTGGGAAGGGTCTGCCGCTGATTCTCGAGTTCTTAGAGATGCAATATCACGACCGAACGGACTCAAAGTTCCGAAGGGATATTATTATCTGTGCGATGCTGGGTACCCTAATGCAGAGGGTTTCCTAGCACCATATAGAGGGGAACGTTACCACCTTTCTGAATGGCGTGGTGCGGGGAATGCACCAACTACTCCAAAAGAATTCTTCAACATGAAGCATTCATCTGCAAGGAATGTCATTGAGAGAGCGTTCGGTTTGTTAAAAGGAAGGTGGGCTATCCTCCGATCGAAATCGTACTATCCAGTTCGAATTCAAGGACGGACCATCGCAGCGTGCTGCTTACTTCACAATCTTATCAACAGGGAGATGGGTGATCGTGAAATTCCCGATGAACTAGATGAGGTGGATTCTGTGTCCGCTACAACTGATGGTGAGAATATTAATTTCATTGAGACTTCGGACGAATGGAGCCGATGGAGAGATGAGTTGGCAGAACAAATGTTTTCGGAATGGGAGTTACGTAATAACTAA

Coding sequence (CDS)

ATGGATCCCGATGAACTAGATCCCCATGAACTAGTGGCCTTATTGACAGCCTTCACCACAACTCAAGCTCAGATTCTCCTACTATTAGATCTATATATGAACGACCATGGAAGAATAGAACACCAATCACCCTACATCCGACACCACATTAGACAATTAGCATTCTTCAGACTTATACACGAGTCTGACTTACGTTGTCGAGAGAGTACAAGGATGGACAGAAGATGTTTTTCCATACTTTGCACGTTATTAAAAACAGTTGCCGGCTTAACCGGTACAGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTTCTTACACATCCTAGCCCACGACGTTAAGAACCGAGTAGTTCGTACGCAGTTCGCTAGGTCTGGGGAGACAGTTTCTAGGCACTTCAACTCCGTCCTTCATGGGGTGTTAGGACTGCATGAAGTTCTTATAAAAAAACCGGAGCCAGTCACGACCTCTTGTACGGATCCGAGGTGGAAATGGTTTCAGAATTGTCTTGGTGCATTAGATGGAACATACATCAAGGTCAATGTTAGTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACGAATGTGCTTGCTGTTTGTGATACAAAAGGAGATTTCACATTCGTCCTACCAGGGTGGGAAGGGTCTGCCGCTGATTCTCGAGTTCTTAGAGATGCAATATCACGACCGAACGGACTCAAAGTTCCGAAGGGATATTATTATCTGTGCGATGCTGGGTACCCTAATGCAGAGGGTTTCCTAGCACCATATAGAGGGGAACGTTACCACCTTTCTGAATGGCGTGGTGCGGGGAATGCACCAACTACTCCAAAAGAATTCTTCAACATGAAGCATTCATCTGCAAGGAATGTCATTGAGAGAGCGTTCGGTTTGTTAAAAGGAAGGTGGGCTATCCTCCGATCGAAATCGTACTATCCAGTTCGAATTCAAGGACGGACCATCGCAGCGTGCTGCTTACTTCACAATCTTATCAACAGGGAGATGGGTGATCGTGAAATTCCCGATGAACTAGATGAGGTGGATTCTGTGTCCGCTACAACTGATGGTGAGAATATTAATTTCATTGAGACTTCGGACGAATGGAGCCGATGGAGAGATGAGTTGGCAGAACAAATGTTTTCGGAATGGGAGTTACGTAATAACTAA

Protein sequence

MDPDELDPHELVALLTAFTTTQAQILLLLDLYMNDHGRIEHQSPYIRHHIRQLAFFRLIHESDLRCRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKNRVVRTQFARSGETVSRHFNSVLHGVLGLHEVLIKKPEPVTTSCTDPRWKWFQNCLGALDGTYIKVNVSVLDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDELDEVDSVSATTDGENINFIETSDEWSRWRDELAEQMFSEWELRNN
Homology
BLAST of Lcy09g011150 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 8.2e-171
Identity = 287/387 (74.16%), Postives = 329/387 (85.01%), Query Frame = 0

Query: 6   LDPHELVALLTAFTTTQAQILLLLDLYMNDHGRIEHQSPYIRHHIRQLAFFRLIHESDLR 65
           +D HEL +++ AF  +Q Q+LL+L+L  ND  RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCF+ILC LL+T+AGLT TEVVDVEEMVAMFLHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLGLHEVLIKKPEPVTTSCTDPRWKWFQNCLGALDGTYIKVNVSVL 185
           GET+SRHFN VL  V+ LHE L+KKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN LKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDELDEVDSVSATTDGENIN 365
           GRWAILR KSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDELAEQMFSEWELRN 393
           +IETS+EWS+WRD LAE+MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy09g011150 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 1.8e-170
Identity = 286/387 (73.90%), Postives = 329/387 (85.01%), Query Frame = 0

Query: 6   LDPHELVALLTAFTTTQAQILLLLDLYMNDHGRIEHQSPYIRHHIRQLAFFRLIHESDLR 65
           +D HEL +++ AF  +Q Q+LL+L+L  ND  RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCF+ILC LL+T+AGLT TEVVDVEEMVAMFLHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLGLHEVLIKKPEPVTTSCTDPRWKWFQNCLGALDGTYIKVNVSVL 185
           GET+SRHFN VL  V+ LH+ L+KKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN LKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDELDEVDSVSATTDGENIN 365
           GRWAILR KSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDELAEQMFSEWELRN 393
           +IETS+EWS+WRD LAE+MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy09g011150 vs. ExPASy TrEMBL
Match: A0A5A7U476 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00800 PE=3 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.6e-169
Identity = 286/387 (73.90%), Postives = 327/387 (84.50%), Query Frame = 0

Query: 6   LDPHELVALLTAFTTTQAQILLLLDLYMNDHGRIEHQSPYIRHHIRQLAFFRLIHESDLR 65
           +D HEL +++ AF  +Q Q+LL+L+L  ND  RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCF+ILC LL+T+AGLT TEVVDVEEMVAMFLHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLGLHEVLIKKPEPVTTSCTDPRWKWFQNCLGALDGTYIKVNVSVL 185
           GET+SRHFN VL  V+ LHE L+KKP+PV   CTD RWKWF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEG AADSR+LRDA+SRPN LKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGY NAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDELDEVDSVSATTDGENIN 365
           GRWAILR KSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDELAEQMFSEWELRN 393
           +IETS+EWS+WRD LAE+MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy09g011150 vs. ExPASy TrEMBL
Match: A0A5A7U9H2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00110 PE=3 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 3.5e-169
Identity = 284/387 (73.39%), Postives = 326/387 (84.24%), Query Frame = 0

Query: 6   LDPHELVALLTAFTTTQAQILLLLDLYMNDHGRIEHQSPYIRHHIRQLAFFRLIHESDLR 65
           +D HEL +++ AF  +Q Q+LL+L+L  ND  RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKNRVVRTQFARS 125
           C +STRMDRRCF+ILC LL+T+AGLT TEVVDVEEMVAMFLHIL HDVKNRV++ +F RS
Sbjct: 61  CHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLGLHEVLIKKPEPVTTSCTDPRWKWFQNCLGALDGTYIKVNVSVL 185
           GET+SRHFN VL  V+ LHE L+KKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN LKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHS ARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSFARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDELDEVDSVSATTDGENIN 365
           GRWAILR KSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTTADDIH 360

Query: 366 FIETSDEWSRWRDELAEQMFSEWELRN 393
           +IETS+EWS+WRD LAE+MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy09g011150 vs. ExPASy TrEMBL
Match: A0A5A7TWH8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001380 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 5.0e-168
Identity = 283/387 (73.13%), Postives = 325/387 (83.98%), Query Frame = 0

Query: 6   LDPHELVALLTAFTTTQAQILLLLDLYMNDHGRIEHQSPYIRHHIRQLAFFRLIHESDLR 65
           +D  EL +++ AF  +Q Q+LL+L+L  ND  RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEQELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKNRVVRTQFARS 125
           CRESTRMDRRCF+ILC LL+T+AGLT TEVVDVEEMVAMFLHILAHDVKNRV++ +F RS
Sbjct: 61  CRESTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLGLHEVLIKKPEPVTTSCTDPRWKWFQNCLGALDGTYIKVNVSVL 185
           GET+S HFN VL  V+ LHE L+KKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISCHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYY 245
           DR RYRTRKGE+ATNVL VCD KGDF +VL GWEGSAADSR+LRDA+SRPNGLKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDRKGDFVYVLAGWEGSAADSRILRDALSRPNGLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPN EGFLAPYRG+RYHL EW G  NAP+T KEFFNMKH SARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNPEGFLAPYRGQRYHLQEWHGPENAPSTSKEFFNMKHPSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDELDEVDSVSATTDGENIN 365
           GRWAILR KSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDELAEQMFSEWELRN 393
           +IETS+EWS+WRD+LAE+MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDDLAEEMFTEWELRN 387

BLAST of Lcy09g011150 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 609.8 bits (1571), Expect = 1.7e-170
Identity = 287/387 (74.16%), Postives = 329/387 (85.01%), Query Frame = 0

Query: 6   LDPHELVALLTAFTTTQAQILLLLDLYMNDHGRIEHQSPYIRHHIRQLAFFRLIHESDLR 65
           +D HEL +++ AF  +Q Q+LL+L+L  ND  RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCF+ILC LL+T+AGLT TEVVDVEEMVAMFLHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLGLHEVLIKKPEPVTTSCTDPRWKWFQNCLGALDGTYIKVNVSVL 185
           GET+SRHFN VL  V+ LHE L+KKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN LKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDELDEVDSVSATTDGENIN 365
           GRWAILR KSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDELAEQMFSEWELRN 393
           +IETS+EWS+WRD LAE+MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy09g011150 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 608.6 bits (1568), Expect = 3.8e-170
Identity = 286/387 (73.90%), Postives = 329/387 (85.01%), Query Frame = 0

Query: 6   LDPHELVALLTAFTTTQAQILLLLDLYMNDHGRIEHQSPYIRHHIRQLAFFRLIHESDLR 65
           +D HEL +++ AF  +Q Q+LL+L+L  ND  RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCF+ILC LL+T+AGLT TEVVDVEEMVAMFLHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLGLHEVLIKKPEPVTTSCTDPRWKWFQNCLGALDGTYIKVNVSVL 185
           GET+SRHFN VL  V+ LH+ L+KKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN LKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDELDEVDSVSATTDGENIN 365
           GRWAILR KSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDELAEQMFSEWELRN 393
           +IETS+EWS+WRD LAE+MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy09g011150 vs. NCBI nr
Match: KAA0048361.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.5 bits (1560), Expect = 3.2e-169
Identity = 286/387 (73.90%), Postives = 327/387 (84.50%), Query Frame = 0

Query: 6   LDPHELVALLTAFTTTQAQILLLLDLYMNDHGRIEHQSPYIRHHIRQLAFFRLIHESDLR 65
           +D HEL +++ AF  +Q Q+LL+L+L  ND  RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCF+ILC LL+T+AGLT TEVVDVEEMVAMFLHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLGLHEVLIKKPEPVTTSCTDPRWKWFQNCLGALDGTYIKVNVSVL 185
           GET+SRHFN VL  V+ LHE L+KKP+PV   CTD RWKWF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEG AADSR+LRDA+SRPN LKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGY NAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDELDEVDSVSATTDGENIN 365
           GRWAILR KSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDELAEQMFSEWELRN 393
           +IETS+EWS+WRD LAE+MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy09g011150 vs. NCBI nr
Match: KAA0051057.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 604.4 bits (1557), Expect = 7.2e-169
Identity = 284/387 (73.39%), Postives = 326/387 (84.24%), Query Frame = 0

Query: 6   LDPHELVALLTAFTTTQAQILLLLDLYMNDHGRIEHQSPYIRHHIRQLAFFRLIHESDLR 65
           +D HEL +++ AF  +Q Q+LL+L+L  ND  RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKNRVVRTQFARS 125
           C +STRMDRRCF+ILC LL+T+AGLT TEVVDVEEMVAMFLHIL HDVKNRV++ +F RS
Sbjct: 61  CHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLGLHEVLIKKPEPVTTSCTDPRWKWFQNCLGALDGTYIKVNVSVL 185
           GET+SRHFN VL  V+ LHE L+KKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN LKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHS ARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSFARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDELDEVDSVSATTDGENIN 365
           GRWAILR KSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTTADDIH 360

Query: 366 FIETSDEWSRWRDELAEQMFSEWELRN 393
           +IETS+EWS+WRD LAE+MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy09g011150 vs. NCBI nr
Match: KAA0047510.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 600.5 bits (1547), Expect = 1.0e-167
Identity = 283/387 (73.13%), Postives = 325/387 (83.98%), Query Frame = 0

Query: 6   LDPHELVALLTAFTTTQAQILLLLDLYMNDHGRIEHQSPYIRHHIRQLAFFRLIHESDLR 65
           +D  EL +++ AF  +Q Q+LL+L+L  ND  RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEQELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKNRVVRTQFARS 125
           CRESTRMDRRCF+ILC LL+T+AGLT TEVVDVEEMVAMFLHILAHDVKNRV++ +F RS
Sbjct: 61  CRESTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLGLHEVLIKKPEPVTTSCTDPRWKWFQNCLGALDGTYIKVNVSVL 185
           GET+S HFN VL  V+ LHE L+KKP+PV   CTD RW+WF+NCLGALDGTYIKVNV   
Sbjct: 121 GETISCHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYY 245
           DR RYRTRKGE+ATNVL VCD KGDF +VL GWEGSAADSR+LRDA+SRPNGLKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDRKGDFVYVLAGWEGSAADSRILRDALSRPNGLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPN EGFLAPYRG+RYHL EW G  NAP+T KEFFNMKH SARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNPEGFLAPYRGQRYHLQEWHGPENAPSTSKEFFNMKHPSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDELDEVDSVSATTDGENIN 365
           GRWAILR KSYYPV +Q RTI ACCLLHNLINREM + +I D +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDELAEQMFSEWELRN 393
           +IETS+EWS+WRD+LAE+MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDDLAEEMFTEWELRN 387

BLAST of Lcy09g011150 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 200.7 bits (509), Expect = 2.2e-51
Identity = 120/352 (34.09%), Postives = 187/352 (53.12%), Query Frame = 0

Query: 56  FRLIHESDLRCRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKN 115
           +++++  + +C E+ RMD+  F  LC LL+T   L  T  + +E  +A+FL I+ H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 116 RVVRTQFARSGETVSRHFNSVLHGVLGLHEVLIKKPEPVTTSCTDPRWKWFQNCLGALDG 175
           R V+  F  SGET+SRHFN+VL+ V+ + +   +      T   D    +F++C+G +D 
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDD--PYFKDCVGVVDS 151

Query: 176 TYIKVNVSVLDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRP 235
            +I V V V ++  +R   G +  NVLA       F +VL GWEGSA+D +VL  A++R 
Sbjct: 152 FHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRR 211

Query: 236 NGLKVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARN 295
           N L+VP+G YY+ D  YPN  GF+APY G          + N+    KE FN +H     
Sbjct: 212 NKLQVPQGKYYIVDNKYPNLPGFIAPYHGV---------STNSREEAKEMFNERHKLLHR 271

Query: 296 VIERAFGLLKGRWAILRSKSYYPVRIQGRTIAACCLLHNLINREM--------------- 355
            I R FG LK R+ IL S   YP++ Q + + A C LHN +  E                
Sbjct: 272 AIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEKPDDLVFRMFEEETLA 331

Query: 356 ---GDREIPDELDEVDSVSATTDGENINF-IETSDEWSRWRDELAEQMFSEW 389
               DRE+  E ++V+ V     G+   F  E  ++  R RDE+A ++++ +
Sbjct: 332 EAGEDREVALEEEQVEIV-----GQEHGFRPEEVEDSLRLRDEIASELWNHY 367

BLAST of Lcy09g011150 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 153.7 bits (387), Expect = 3.1e-37
Identity = 94/265 (35.47%), Postives = 132/265 (49.81%), Query Frame = 0

Query: 56  FRLIHESDLRCRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKN 115
           +R + +    C +  RM   CF+ LC +L+T   L  T  + +EE VAMFL I  H+   
Sbjct: 56  WRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVY 115

Query: 116 RVVRTQFARSGETVSRHFNSVLHGVLGLHEVLIKKPE-------PVTTSCTDPRWKWFQN 175
           R V  +F R+ ETV R F  VL     L    I+ P        P         W +F  
Sbjct: 116 RDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSG 175

Query: 176 CLGALDGTYIKVNVSVLDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVL 235
            +GA+DGT++ V V    +  Y  R    + N++A+CD K  FT++  G  GS  D+ VL
Sbjct: 176 FVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVL 235

Query: 236 RDAISRPNGLKVPKG-YYYLCDAGYPNAEGFLAPYRGE-----RYHLSEWRGAGNAPTTP 295
           + A    +   +P    YYL D+GYPN +G LAPYR       RYH+S++   G  P   
Sbjct: 236 QIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFY-YGPRPRNK 295

Query: 296 KEFFNMKHSSARNVIERAFGLLKGR 308
            E FN  H+S R+VIER F + K +
Sbjct: 296 HELFNQCHTSLRSVIERTFRIWKNK 319

BLAST of Lcy09g011150 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 133.3 bits (334), Expect = 4.4e-31
Identity = 74/190 (38.95%), Postives = 103/190 (54.21%), Query Frame = 0

Query: 211 FTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYYYLCDAGYPNAEGFLAPYRGERYHLS 270
           F +VL GWEGSA DSRVL DA+ +          +YL D G+ N   FLAP+RG RYHL 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 271 EWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTIAACC 330
           E+ G    P TP E FN++H S RNVIER FG+ K R+AI +S   +  + Q   +  C 
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 331 LLHNLINRE--MGDREIPDEL-DEVDSVSATTDGENINFIETS----------DEWSRWR 388
            LHN + +E    + + PDE+ +E D V+   +  N N I+            +  + WR
Sbjct: 145 ALHNFLRKECRSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTNMWR 204

BLAST of Lcy09g011150 vs. TAIR 10
Match: AT5G12010.1 (unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-19
Identity = 80/302 (26.49%), Postives = 136/302 (45.03%), Query Frame = 0

Query: 67  RESTRMDRRCFSILCTLLKTVAGLTGT---EVVDVEEMVAMFLHILAHDVKNRVVRTQFA 126
           +++ RM +  F ++C  L +      T     + V + VA+ +  LA     R+V  +F 
Sbjct: 176 KKAFRMSKSTFELICDELNSAVAKEDTALRNAIPVRQRVAVCIWRLATGEPLRLVSKKF- 235

Query: 127 RSGETVSRHFNSVLHGVLGLHEVLIKK----PEPVTTSCTDPRWK---WFQNCLGALDGT 186
             G  +S     VL     + +VL+ K    P+  +      R++      N +G++  T
Sbjct: 236 --GLGISTCHKLVLEVCKAIKDVLMPKYLQWPDDESLRNIRERFESVSGIPNVVGSMYTT 295

Query: 187 YI-----KVNVSVLDRPRY--RTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLR 246
           +I     K++V+     R+  R +K   +  + AV + KG FT +  GW GS  D +VL 
Sbjct: 296 HIPIIAPKISVASYFNKRHTERNQKTSYSITIQAVVNPKGVFTDLCIGWPGSMPDDKVLE 355

Query: 247 DAI--SRPNGLKVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFN 306
            ++   R N   + KG +     G+P  +  L PY  +              T  +  FN
Sbjct: 356 KSLLYQRANNGGLLKGMWVAGGPGHPLLDWVLVPYTQQNL------------TWTQHAFN 415

Query: 307 MKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPD 350
            K S  + V + AFG LKGRWA L+ ++   ++     + ACC+LHN+   EM + ++  
Sbjct: 416 EKMSEVQGVAKEAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHNIC--EMREEKMEP 460

BLAST of Lcy09g011150 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 8.5e-19
Identity = 67/215 (31.16%), Postives = 98/215 (45.58%), Query Frame = 0

Query: 59  IHESDLRCRESTRMDRRCFSILCTLLKTVAGLTGTEVVDVEEMVAMFLHILAHDVKNRVV 118
           I+ +++ C+   RM    F+ LC +L    GL  +  + ++E VA+FL I A +   R +
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 119 RTQFARSGETVSRHFNSVLHGV--LGLHEVLIKKPEPVTTSCT----DPR-WKWFQNCLG 178
             +F  + ET+ R F+ VL  +  L +  +  +K E +         D R W +  + LG
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWPFLMDLLG 136

Query: 179 ALDGTYIKVNVSVLDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDA 238
                                     + NVLA+CD    FT+   G  GS  D+RVL  A
Sbjct: 137 I------------------------ASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAA 196

Query: 239 ISRPNGLKV-PKGYYYLCDAGYPNAEGFLAPYRGE 266
           IS      V P   YYL D+GY N  G+LAPYR E
Sbjct: 197 ISDDPLFHVPPDSKYYLVDSGYANKRGYLAPYRRE 207

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BDX08.2e-17174.16Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TXW11.8e-17073.90Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U4761.6e-16973.90Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U9H23.5e-16973.39Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TWH85.0e-16873.13Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0035620.11.7e-17074.16retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon... [more]
KAA0046727.13.8e-17073.90retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon... [more]
KAA0048361.13.2e-16973.90retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0051057.17.2e-16973.39retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0047510.11.0e-16773.13retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT5G41980.12.2e-5134.09CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT1G43722.13.1e-3735.47unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G35695.14.4e-3138.95CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT5G12010.11.0e-1926.49unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, ... [more]
AT5G28730.18.5e-1931.16unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 173..334
e-value: 2.7E-25
score: 88.9
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 33..391
NoneNo IPR availablePANTHERPTHR22930:SF201NUCLEASE HARBI1-LIKE PROTEINcoord: 33..391

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g011150.1Lcy09g011150.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding