Lcy09g010320 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g010320
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Chr09: 10906503 .. 10908469 (-)
RNA-Seq Expression	Lcy09g010320
Synteny	Lcy09g010320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCTTCCTCAAAGATAAAATCACAAAACTCACACTCCTTTACATACCTGAAACTTCCCCATGGCTGCAACTTCTGGTGCTGTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGCTAGCAGAACCCGGACCTTGCTTGCTGGACCCAGAGGCGGTGTCAATGTCGCCGGCTCTCGCAAGCTCGTCATCGTCGCTGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGGCGTTCGAGGGGGCGGCAACTTCGTCGACCCAGAATGGCTAGATGGCTCGTATGTCTCTCTTACTTTCTCCAAGTTCCACATTTTTCGGCTAATGTTTTGAACCTGCAGTTGGATTAGGCTTTTAATTTTTGTCACTCTAAGAAGTTTACTGTTTTAATTTTTTCCTAAGTAGTTATTGTCCAGAATTTAATTTGGTATAGGCATTTTATACACTGTTATAGCAGGATTCCTAGAAAAGACTGGAAGAAGCATTTTGTCAATCAAACCGTTCACAACTCAAGAATTAGTGTTTAAAATTCTGGAAGGGTTATTTCATCATACACCTTCTAAGTTCTAAGCAATGACTGTCTAAAATCTGGTATAGGCATTTCATCAAACAATTTCAAAGCAGTTACTCTTAAAAATCTTAATTAAACACTTTCTGAGCAATTACTGTCTAAAATCTGGTATAGACATTTCATCGAACATTTTCATAGCAGTTACTCTTAAAAATCTAGACGAGGCATTTCATCAAACACTTTCTGAGCAATTACTGTCTAAGATCTGATATAGGCATTTCATCGAACACTTTCAAAGCAGTTACTCTTAAAAATCTAGAAGAGGCATTTAATCAGACACTTTCTAAGCAATCACAGTTCAAAACTTTGGAAGAGGCATTTCATCAAACAGTTGATAAGCAATTACTTGTTCCATTTGCATAGACTTCCAGGCGACTACGGCTTCGACCCTCTGGGGTTGGGGAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCGTAGGGCAAGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCCGATCCGAGCGCAGTCGCCCCATTCTCCTTCGGAACACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCGCAGTCCGTCGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCGACGGGAGAACAGGGGTATCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTATTAAGGATGGGGTTTACATTGCGGACTCGGAGAAGTTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCGTTGGGTGCCCTTGGATTGTAAAAAATTTGTTGATGTGAAGGTAAAATTGTTCATAATTTCACTAAAAAAAAAGAACTTGGGATTGGGACTGAACATGTGTGGATGATTTTGAGATAGATTTTGAAGGGGTTTTGTTGGAGCCCTAAATCAAAATTCGAAATTGAGTGTGTGCCATTTCCAAGTTCTAAGTTTTTAGTTGCATGTATGGTTGAATTGGTTAAGACTTAAGATATATAGGACTGATAGGTAAGGCATTTCCAAATTAATAGAGATCTTTTTTCGTTCAACAATTATGAGATTTGGAGACCACTGTTGAGATGATAATTAGTGTCATTGAATTAAACAAGATTAAAACAATAATTGAATCATACAATTGAATGTATATATTTTATGACAAAATTAGAATGTGTATACATATGCATAGTAGTAATTGGCATATATTTTCAACCAAAAGGTCAAAGGTTCGAATCGTCCCCAAACTAAAAAATATATGTATATACACATAGG

mRNA sequence

GCCCTTCCTCAAAGATAAAATCACAAAACTCACACTCCTTTACATACCTGAAACTTCCCCATGGCTGCAACTTCTGGTGCTGTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGCTAGCAGAACCCGGACCTTGCTTGCTGGACCCAGAGGCGGTGTCAATGTCGCCGGCTCTCGCAAGCTCGTCATCGTCGCTGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGGCGTTCGAGGGGGCGGCAACTTCGTCGACCCAGAATGGCTAGATGGCTCACTTCCAGGCGACTACGGCTTCGACCCTCTGGGGTTGGGGAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCGTAGGGCAAGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCCGATCCGAGCGCAGTCGCCCCATTCTCCTTCGGAACACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCGCAGTCCGTCGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCGACGGGAGAACAGGGGTATCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTATTAAGGATGGGGTTTACATTGCGGACTCGGAGAAGTTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCGTTGGGTGCCCTTGGATTGTAAAAAATTTGTTGATGTGAAGGTAAAATTGTTCATAATTTCACTAAAAAAAAAGAACTTGGGATTGGGACTGAACATGTGTGGATGATTTTGAGATAGATTTTGAAGGGGTTTTGTTGGAGCCCTAAATCAAAATTCGAAATTGAGTGTGTGCCATTTCCAAGTTCTAAGTTTTTAGTTGCATGTATGGTTGAATTGGTTAAGACTTAAGATATATAGGACTGATAGGTAAGGCATTTCCAAATTAATAGAGATCTTTTTTCGTTCAACAATTATGAGATTTGGAGACCACTGTTGAGATGATAATTAGTGTCATTGAATTAAACAAGATTAAAACAATAATTGAATCATACAATTGAATGTATATATTTTATGACAAAATTAGAATGTGTATACATATGCATAGTAGTAATTGGCATATATTTTCAACCAAAAGGTCAAAGGTTCGAATCGTCCCCAAACTAAAAAATATATGTATATACACATAGG

Coding sequence (CDS)

ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGCTAGCAGAACCCGGACCTTGCTTGCTGGACCCAGAGGCGGTGTCAATGTCGCCGGCTCTCGCAAGCTCGTCATCGTCGCTGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGGCGTTCGAGGGGGCGGCAACTTCGTCGACCCAGAATGGCTAGATGGCTCACTTCCAGGCGACTACGGCTTCGACCCTCTGGGGTTGGGGAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCGTAGGGCAAGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCCGATCCGAGCGCAGTCGCCCCATTCTCCTTCGGAACACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCGCAGTCCGTCGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCGACGGGAGAACAGGGGTATCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTATTAAGGATGGGGTTTACATTGCGGACTCGGAGAAGTTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCGTTGGGTGCCCTTGGATTGTAA

Protein sequence

MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

Homology

[Close]

BLAST of Lcy09g010320 vs. ExPASy Swiss-Prot
Match: P27524 (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAP10A PE=3 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 1.9e-120
Identity = 208/256 (81.25%), Postives = 226/256 (88.28%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGG-VNVAGSRKLVIVAAAQPKKSWIPGVR 60
           MA TS AVLNGL S FL G ++++ LLA P    V  A + K   V AA  KKSWIP VR
Sbjct: 1   MATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVR 60

Query: 61  GGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW 120
           GGGN VDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAW
Sbjct: 61  GGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120

Query: 121 SGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180
           SGIPWFEAGADP A+APFSFGTLLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TA
Sbjct: 121 SGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTA 180

Query: 181 ENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIF 240
           ENFAN TGEQGYPGGKFFDPL  AG++ +GVY+ D+EKLERLK+AEIKHAR+AMLAMLIF
Sbjct: 181 ENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIF 240

Query: 241 YFEAGQGKTPLGALGL 256
           YFEAGQGKTPLGALGL
Sbjct: 241 YFEAGQGKTPLGALGL 256

[Close]

BLAST of Lcy09g010320 vs. ExPASy Swiss-Prot
Match: P36494 (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea OX=3562 PE=2 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 2.5e-117
Identity = 208/259 (80.31%), Postives = 229/259 (88.42%), Query Frame = 0


Query: 2   AATSG-AVLNGLGSPFLRGASRT--RTLLAGPRGGVNVA-GSRKLVIV-AAAQPKKSWIP 61
           AATS  A++NG  SPFL G  ++    L    + G  V+  SRKLV+V AAA PKKSWIP
Sbjct: 3   AATSATAIVNGFTSPFLSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIP 62

Query: 62  GVRGGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVG 121
            V+GGGNF+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVG
Sbjct: 63  AVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVG 122

Query: 122 QAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWS 181
           QAW+GIPWFEAGADP AVAPFSFGTLLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWS
Sbjct: 123 QAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWS 182

Query: 182 RTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAM 241
           RTAENF+N+TGEQGYPGGKFFDPL  AG+I +GVY  D++KLERLKLAEIKHAR+AMLAM
Sbjct: 183 RTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAM 242

Query: 242 LIFYFEAGQGKTPLGALGL 256
           LIFYFEAGQGKTPLGALGL
Sbjct: 243 LIFYFEAGQGKTPLGALGL 261

[Close]

BLAST of Lcy09g010320 vs. ExPASy Swiss-Prot
Match: P27525 (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAP10B PE=3 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 3.1e-115
Identity = 201/257 (78.21%), Postives = 223/257 (86.77%), Query Frame = 0


Query: 1   MAATSG-AVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAA-QPKKSWIPGV 60
           M  TS  AVLNGL S FL G  +T+ LL G      V   ++ V+ AAA  PKKSWIP V
Sbjct: 1   MTTTSATAVLNGLSSSFLTGGKKTQALL-GAHVTARVTTPKRFVVAAAAVAPKKSWIPAV 60

Query: 61  RGGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQA 120
           + GGN VDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQA
Sbjct: 61  KSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 120

Query: 121 WSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRT 180
           WSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+T
Sbjct: 121 WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKT 180

Query: 181 AENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLI 240
           AENFAN TGEQGYPGGKFFDPL  AG++ +GVY+ D+EKLERLKLAEIKH+R+AMLAMLI
Sbjct: 181 AENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLI 240

Query: 241 FYFEAGQGKTPLGALGL 256
           FYFEAGQGKTPLGALGL
Sbjct: 241 FYFEAGQGKTPLGALGL 256

[Close]

BLAST of Lcy09g010320 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.9e-32
Identity = 89/244 (36.48%), Postives = 122/244 (50.00%), Query Frame = 0


Query: 5   SGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNF 64
           +G+++    + FL G     +    P G  +VA S     VAA   +  W PG       
Sbjct: 23  NGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVS----AVAADPDRPLWFPG------S 82

Query: 65  VDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI-- 124
             PEWLDGSLPGD+GFDPLGLG DP  LKW  +AEL+H RWAM    GIF+ +  + I  
Sbjct: 83  TPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV 142

Query: 125 ----PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRT 184
                W+ AG            TL   +L+L+GW E +RW D   P   + +   P    
Sbjct: 143 LNTPSWYTAGEQEYFT---DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFP---- 202

Query: 185 AENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLI 243
             N    T + GYPGG +FDPLG+              K++ L+  EIK+ R+AMLA++ 
Sbjct: 203 -NNKLTGT-DVGYPGGLWFDPLGWGS--------GSPAKIKELRTKEIKNGRLAMLAVMG 239

[Close]

BLAST of Lcy09g010320 vs. ExPASy Swiss-Prot
Match: Q8LCQ4 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA6 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-31
Identity = 89/236 (37.71%), Postives = 115/236 (48.73%), Query Frame = 0


Query: 15  PFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKS-WIPGVRGGGNFVDPEWLDGS 74
           P +   S T   L   R  V  AG     +     P +  W PG         PEWLDGS
Sbjct: 28  PHVASTSSTGGRLMRERLVVVRAGKEVSSVCEPLPPDRPLWFPGSS------PPEWLDGS 87

Query: 75  LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW------SGIPWFEA 134
           LPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI + +            W++A
Sbjct: 88  LPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLERLGFIENFSWYDA 147

Query: 135 GADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATG 194
           G+           TL   Q++LMGW E +RW D   P S  +E   P      +  N   
Sbjct: 148 GSREYFA---DSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYP------HKVNPKP 207

Query: 195 EQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEA 244
           + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Sbjct: 208 DVGYPGGLWFDFMMWGRGSPEPVMV--------LRTKEIKNGRLAMLAFLGFCFQA 240

[Close]

BLAST of Lcy09g010320 vs. ExPASy TrEMBL
Match: A0A5D3DGI0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00250 PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.1e-138
Identity = 240/255 (94.12%), Postives = 248/255 (97.25%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVLNGLGSPFLRG+SRTRTLLAG RGGVNV  S KLV++AAAQPKKSWIPGVRG
Sbjct: 1   MAATSGAVLNGLGSPFLRGSSRTRTLLAGARGGVNVVSSSKLVVIAAAQPKKSWIPGVRG 60

Query: 61  GGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGN VDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALGL
Sbjct: 241 FEAGQGKTPLGALGL 255

[Close]

BLAST of Lcy09g010320 vs. ExPASy TrEMBL
Match: A0A1S3B4E4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485628 PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.1e-138
Identity = 240/255 (94.12%), Postives = 248/255 (97.25%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVLNGLGSPFLRG+SRTRTLLAG RGGVNV  S KLV++AAAQPKKSWIPGVRG
Sbjct: 1   MAATSGAVLNGLGSPFLRGSSRTRTLLAGARGGVNVVSSSKLVVIAAAQPKKSWIPGVRG 60

Query: 61  GGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGN VDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALGL
Sbjct: 241 FEAGQGKTPLGALGL 255

[Close]

BLAST of Lcy09g010320 vs. ExPASy TrEMBL
Match: A0A6J1JU87 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489772 PE=3 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 7.8e-138
Identity = 240/255 (94.12%), Postives = 248/255 (97.25%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVLNGLGSPFLRG SRT+TLLAG RGGVNV GSRKLVIVAAAQPKKSWIP V+G
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGN VDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG+IKDGVYI D+EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALG+
Sbjct: 241 FEAGQGKTPLGALGV 255

[Close]

BLAST of Lcy09g010320 vs. ExPASy TrEMBL
Match: A0A6J1JEC2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486120 PE=3 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.0e-137
Identity = 238/255 (93.33%), Postives = 248/255 (97.25%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGA+LNGLGSPFL G SRT+TLLAG RGGVNV  SRKLVIVAAAQPKKSWIP V+G
Sbjct: 1   MAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGNF+DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF+GQAWS
Sbjct: 61  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALGL
Sbjct: 241 FEAGQGKTPLGALGL 255

[Close]

BLAST of Lcy09g010320 vs. ExPASy TrEMBL
Match: A0A0A0KEF5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G057170 PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.3e-137
Identity = 240/255 (94.12%), Postives = 247/255 (96.86%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVL GLGSPFLRG+SRTRTLLAG RG VNV  S KLVIVAAAQPKKSW+PGVRG
Sbjct: 1   MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRG 60

Query: 61  GGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGN VDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG++KDGVYIAD+EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALGL
Sbjct: 241 FEAGQGKTPLGALGL 255

[Close]

BLAST of Lcy09g010320 vs. NCBI nr
Match: XP_008441527.1 (PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis melo] >KAA0054917.1 chlorophyll a-b binding protein CP24 10A [Cucumis melo var. makuwa] >TYK22706.1 chlorophyll a-b binding protein CP24 10A [Cucumis melo var. makuwa])

HSP 1 Score: 501.5 bits (1290), Expect = 4.2e-138
Identity = 240/255 (94.12%), Postives = 248/255 (97.25%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVLNGLGSPFLRG+SRTRTLLAG RGGVNV  S KLV++AAAQPKKSWIPGVRG
Sbjct: 1   MAATSGAVLNGLGSPFLRGSSRTRTLLAGARGGVNVVSSSKLVVIAAAQPKKSWIPGVRG 60

Query: 61  GGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGN VDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALGL
Sbjct: 241 FEAGQGKTPLGALGL 255

[Close]

BLAST of Lcy09g010320 vs. NCBI nr
Match: XP_022993917.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 499.6 bits (1285), Expect = 1.6e-137
Identity = 240/255 (94.12%), Postives = 248/255 (97.25%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVLNGLGSPFLRG SRT+TLLAG RGGVNV GSRKLVIVAAAQPKKSWIP V+G
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGN VDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG+IKDGVYI D+EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALG+
Sbjct: 241 FEAGQGKTPLGALGV 255

[Close]

BLAST of Lcy09g010320 vs. NCBI nr
Match: XP_022988907.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 499.2 bits (1284), Expect = 2.1e-137
Identity = 238/255 (93.33%), Postives = 248/255 (97.25%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGA+LNGLGSPFL G SRT+TLLAG RGGVNV  SRKLVIVAAAQPKKSWIP V+G
Sbjct: 1   MAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGNF+DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF+GQAWS
Sbjct: 61  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALGL
Sbjct: 241 FEAGQGKTPLGALGL 255

[Close]

BLAST of Lcy09g010320 vs. NCBI nr
Match: XP_004140973.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis sativus] >KGN46151.1 hypothetical protein Csa_005752 [Cucumis sativus])

HSP 1 Score: 498.8 bits (1283), Expect = 2.7e-137
Identity = 240/255 (94.12%), Postives = 247/255 (96.86%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVL GLGSPFLRG+SRTRTLLAG RG VNV  S KLVIVAAAQPKKSW+PGVRG
Sbjct: 1   MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRG 60

Query: 61  GGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGN VDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG++KDGVYIAD+EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALGL
Sbjct: 241 FEAGQGKTPLGALGL 255

[Close]

BLAST of Lcy09g010320 vs. NCBI nr
Match: KAG7016421.1 (Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 498.4 bits (1282), Expect = 3.6e-137
Identity = 239/255 (93.73%), Postives = 248/255 (97.25%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVLNGLGSPFLRG SRT+TLLAG RGGVNV GSRKLVIVAAAQPKKSWIP V+G
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGN VDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG+IKDGVYI D++KLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALG+
Sbjct: 241 FEAGQGKTPLGALGV 255

[Close]

BLAST of Lcy09g010320 vs. TAIR 10
Match: AT1G15820.1 (light harvesting complex photosystem II subunit 6 )

HSP 1 Score: 426.0 bits (1094), Expect = 2.1e-119
Identity = 205/255 (80.39%), Postives = 224/255 (87.84%), Query Frame = 0


Query: 3   ATSGAVLNGLGSPFLRGASRTRTLLAGPRG-GVNVAGSRKLVI-VAAAQPKKSWIPGVRG 62
           A SGAVL+GLGS FL G  R  T LA   G G    G + L++  AAAQPKKSWIP V+G
Sbjct: 4   AVSGAVLSGLGSSFLTGGKRGATALASGVGTGAQRVGRKTLIVAAAAAQPKKSWIPAVKG 63

Query: 63  GGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 122
           GGNF+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAWS
Sbjct: 64  GGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS 123

Query: 123 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 182
           G+ WFEAGA P A+APFSFG+LLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+TAE
Sbjct: 124 GVAWFEAGAQPDAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAE 183

Query: 183 NFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFY 242
           NFAN TG+QGYPGG+FFDPLG AG  +DGVY  D EKLERLKLAEIKH+R+AM+AMLIFY
Sbjct: 184 NFANYTGDQGYPGGRFFDPLGLAGKNRDGVYEPDFEKLERLKLAEIKHSRLAMVAMLIFY 243

Query: 243 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALGL
Sbjct: 244 FEAGQGKTPLGALGL 258

[Close]

BLAST of Lcy09g010320 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32
Identity = 89/236 (37.71%), Postives = 115/236 (48.73%), Query Frame = 0


Query: 15  PFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKS-WIPGVRGGGNFVDPEWLDGS 74
           P +   S T   L   R  V  AG     +     P +  W PG         PEWLDGS
Sbjct: 28  PHVASTSSTGGRLMRERLVVVRAGKEVSSVCEPLPPDRPLWFPGSS------PPEWLDGS 87

Query: 75  LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW------SGIPWFEA 134
           LPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI + +            W++A
Sbjct: 88  LPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLERLGFIENFSWYDA 147

Query: 135 GADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATG 194
           G+           TL   Q++LMGW E +RW D   P S  +E   P      +  N   
Sbjct: 148 GSREYFA---DSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYP------HKVNPKP 207

Query: 195 EQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEA 244
           + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Sbjct: 208 DVGYPGGLWFDFMMWGRGSPEPVMV--------LRTKEIKNGRLAMLAFLGFCFQA 240

[Close]

BLAST of Lcy09g010320 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-32
Identity = 84/229 (36.68%), Postives = 114/229 (49.78%), Query Frame = 0


Query: 32  GGVNVAGSRKLVIVAAAQPKKS------------WIPGVRGGGNFVDPEWLDGSLPGDYG 91
           GG  +   +KL + A ++P  S            W PG         PEWLDGSLPGD+G
Sbjct: 21  GGKKLRLKKKLTVPAVSRPDASVRAVAADPDRPIWFPG------STPPEWLDGSLPGDFG 80

Query: 92  FDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPSA 151
           FDPLGL  DP  LKW  +AE++H RWAM    GIF+ +  + I       W+ AG     
Sbjct: 81  FDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYF 140

Query: 152 VAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPG 211
                  TL   +L+L+GW E +RW D   P S + +   P      N    T + GYPG
Sbjct: 141 T---DKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFP-----NNKLTGT-DVGYPG 200

Query: 212 GKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFE 243
           G +FDPLG+              KL+ L+  EIK+ R+AMLA++  +F+
Sbjct: 201 GLWFDPLGWGS--------GSPAKLKELRTKEIKNGRLAMLAVMGAWFQ 226

[Close]

BLAST of Lcy09g010320 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-31
Identity = 93/239 (38.91%), Postives = 126/239 (52.72%), Query Frame = 0


Query: 11  GLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWL 70
           G+   FL       +++      V  AG    +    A  + +W+PG+        P +L
Sbjct: 8   GITGGFLHHRRDASSVITRRISSVKAAGGG--INPTVAVERATWLPGLN------PPPYL 67

Query: 71  DGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGI----PW 130
           DG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +GI     W
Sbjct: 68  DGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVW 127

Query: 131 FEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFAN 190
           +EAGA     A  S  TL+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A 
Sbjct: 128 YEAGAVKFDFA--STKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEA---AL 187

Query: 191 ATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEA 244
              E GYPGG   +PLG A          D +     KL EIK+ R+AM+AML F+ +A
Sbjct: 188 EGLEPGYPGGPLLNPLGLA---------KDVQNAHDWKLKEIKNGRLAMMAMLGFFVQA 224

[Close]

BLAST of Lcy09g010320 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-31
Identity = 93/239 (38.91%), Postives = 126/239 (52.72%), Query Frame = 0


Query: 11  GLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWL 70
           G+   FL       +++      V  AG    +    A  + +W+PG+        P +L
Sbjct: 8   GITGGFLHHRRDASSVITRRISSVKAAGGG--INPTVAVERATWLPGLN------PPPYL 67

Query: 71  DGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGI----PW 130
           DG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +GI     W
Sbjct: 68  DGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVW 127

Query: 131 FEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFAN 190
           +EAGA     A  S  TL+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A 
Sbjct: 128 YEAGAVKFDFA--STKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEA---AL 187

Query: 191 ATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEA 244
              E GYPGG   +PLG A          D +     KL EIK+ R+AM+AML F+ +A
Sbjct: 188 EGLEPGYPGGPLLNPLGLA---------KDVQNAHDWKLKEIKNGRLAMMAMLGFFVQA 224

The following BLAST results are available for this feature:

BLAST of Lcy09g010320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27524	1.9e-120	81.25	Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum ...	[more]
P36494	2.5e-117	80.31	Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea OX=3562...	[more]
P27525	3.1e-115	78.21	Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum ...	[more]
P13869	1.9e-32	36.48	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]
Q8LCQ4	1.6e-31	37.71	Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis th...	[more]

BLAST of Lcy09g010320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DGI0	2.1e-138	94.12	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3B4E4	2.1e-138	94.12	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1JU87	7.8e-138	94.12	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1JEC2	1.0e-137	93.33	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0KEF5	1.3e-137	94.12	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]

BLAST of Lcy09g010320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441527.1	4.2e-138	94.12	PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis melo...	[more]
XP_022993917.1	1.6e-137	94.12	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]	[more]
XP_022988907.1	2.1e-137	93.33	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]	[more]
XP_004140973.1	2.7e-137	94.12	chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis sativus] >KGN46...	[more]
KAG7016421.1	3.6e-137	93.73	Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma ...	[more]

BLAST of Lcy09g010320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15820.1	2.1e-119	80.39	light harvesting complex photosystem II subunit 6	[more]
AT1G19150.1	1.1e-32	37.71	photosystem I light harvesting complex gene 6	[more]
AT3G61470.1	2.0e-32	36.68	photosystem I light harvesting complex gene 2	[more]
AT1G45474.1	1.3e-31	38.91	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	1.3e-31	38.91	photosystem I light harvesting complex gene 5	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 67..254 e-value: 5.0E-54 score: 185.1
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 67..243 e-value: 5.8E-49 score: 166.7
None	No IPR available	PANTHER	PTHR21649:SF107	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 2..255
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 65..255
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 2..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g010320.1	Lcy09g010320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding