Lcy09g010010 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g010010
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description30S ribosomal protein S1 homolog A isoform X2
LocationChr09: 10491091 .. 10492770 (-)
RNA-Seq ExpressionLcy09g010010
SyntenyLcy09g010010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTCTTTAAGTCTAAAGATTCTGTAGAAGAAGAGGAAGAAGAGGAAAAAACATTACAAGCTTTTGAGGAGAAAATTGATGGAGATGATGAGACCGAGAAAGCCAATAAGTTAAATGTTGAGTACTATGAGCCCAAACCTAGAGATGTTGTGGTTGATGTGGTTGTCCCAGGTATCGAAAACAAGCTCGATATCAACGTGGGAGCGGATTTATTGGGAACAATGTTGACTAAAGAAGTGCTTCCCTTGTATGACAAAGAGATGGAGTTTTTGATGTGTGATCTTGACAATGATGCTGAGTCTTTTATGGTGAATGGAAAGATGGGGTTGGTGATATATGATGGTGCTGTTAGCCGTGGACCGGGGCCAGTGCGCCCTGTTGTGGAGACTGGCACAGAGTTTTGTTTGCTGTGGTTCTGGGAAGGACACTCAGTGGTTGTCCATTGCTCTCGACAAGAAGGTACTTTCGACGGTTAGCCTGGCATCGAATGAGGCAGGTTCTTTTCTTGATTAGCTTCTCTGTTTATTGAAGTTTCTGTTTTAGGGGGCAGAAAGAAGAAATGTATATATTTGTTGTGGTTTCCTTGGTCGACAGATAAAACGACTCTTTAAGCCAATTGAAGTTAAAATATCGGAGTGGAATACTGGAGGCCTTCTTACACTTGAGGTTGTCTATGCGATAGTGACTCATTTGGTCTTTAGCTTATACATTTGTTTGGGTGGCTTATATTTCATTTTGGTTTTGAACTTTTGTTGTGCAGAGTTTGCGAGCATTTCTTCCAAAGGCTGAGTTATTGAATCGAGTACATAACTTCACAGAGTCAAAAGAAAATGTGAGTAGGATCCAGTTTCTTCTATTTTTGAGCTGCCATCTGCGTTACCTCACCCTTCATTTAAATGGCATCTCCATCTTCCATCGAAAATGATCGTTGCCTCGAGACTGCAGATTTACTATGTTCTACAAACATTGTTGTGTTTCTTTATTTACTGACTAGAATAGTACCAAGGATAATATGAAATTACGTATAGAGATGTTCAAGGAACACCATTTAGATATTATTTACTATAACATAGCAAGAAATTATTTCTGCTTTGGGGCCTGCCATATTCTGTTGTTCTTATTAATCTTTAGTTTCTGAAGTTATTGACGCATCCGCTCGAATGTTCCTCAGTGGGTTACTCCATGTTTCGAACATCACCCGTGCTCGAGTTACCTCGGTGAGCGACTTTACTTGCAGTGGGTGAAATGGTCCAAGTTTTAGTTGTGAAGTCAATGTTTCCTGACAAGACATCTCTAAGGTAATTCAAGAGTATATTACTCAATTTAACAGTCATGGTTGGTACCTCTTATAACTAATCATTTTGCTTTTGTGGCTTTACAGTATTGCAGACCTCGAAAGTGAGCCCGGCCTCTTTATATCGAACAAAGAGGTAATACTCATAATGATCTTCCTCACCATTGAACTTCATTTTATTCGAAATTTGACTCGGTCGTTTTTTCTTTTCCTTTATTAGAAAGTATTTTCAGAGGCCAAGATCATGGCGAAGAAGTTCAGGCAAAAGCTACCTGCGGTCGAAGGCATTCCCTGGCCAGAACCTGCTCCAACTATTGATCTTCTGTTTGAAAATGAATCGAACATGTATGCAAATTGGAAGTGGTTCAAATTCGAAAGGTAG

mRNA sequence

ATGAAGTTCTTTAAGTCTAAAGATTCTGTAGAAGAAGAGGAAGAAGAGGAAAAAACATTACAAGCTTTTGAGGAGAAAATTGATGGAGATGATGAGACCGAGAAAGCCAATAAGTTAAATGTTGAGTACTATGAGCCCAAACCTAGAGATGTTGTGGTTGATGTGGTTGTCCCAGGTATCGAAAACAAGCTCGATATCAACGTGGGAGCGGATTTATTGGGAACAATGTTGACTAAAGAAGTGCTTCCCTTGTATGACAAAGAGATGGAGTTTTTGATGTGTGATCTTGACAATGATGCTGAGTCTTTTATGGTGAATGGAAAGATGGGGTTGGTGATATATGATGGTGCTGTTAGCCGTGGACCGGGGCCAGTGCGCCCTGTTGTGGAGACTGGCACAGAGTTTTGTTTGCTGTGGTTCTGGGAAGGACACTCAGTGGTTGTCCATTGCTCTCGACAAGAAGTGGGTGAAATGGTCCAAGTTTTAGTTGTGAAGTCAATGTTTCCTGACAAGACATCTCTAAGTATTGCAGACCTCGAAAGTGAGCCCGGCCTCTTTATATCGAACAAAGAGAAAGTATTTTCAGAGGCCAAGATCATGGCGAAGAAGTTCAGGCAAAAGCTACCTGCGGTCGAAGGCATTCCCTGGCCAGAACCTGCTCCAACTATTGATCTTCTGTTTGAAAATGAATCGAACATGTATGCAAATTGGAAGTGGTTCAAATTCGAAAGGTAG

Coding sequence (CDS)

ATGAAGTTCTTTAAGTCTAAAGATTCTGTAGAAGAAGAGGAAGAAGAGGAAAAAACATTACAAGCTTTTGAGGAGAAAATTGATGGAGATGATGAGACCGAGAAAGCCAATAAGTTAAATGTTGAGTACTATGAGCCCAAACCTAGAGATGTTGTGGTTGATGTGGTTGTCCCAGGTATCGAAAACAAGCTCGATATCAACGTGGGAGCGGATTTATTGGGAACAATGTTGACTAAAGAAGTGCTTCCCTTGTATGACAAAGAGATGGAGTTTTTGATGTGTGATCTTGACAATGATGCTGAGTCTTTTATGGTGAATGGAAAGATGGGGTTGGTGATATATGATGGTGCTGTTAGCCGTGGACCGGGGCCAGTGCGCCCTGTTGTGGAGACTGGCACAGAGTTTTGTTTGCTGTGGTTCTGGGAAGGACACTCAGTGGTTGTCCATTGCTCTCGACAAGAAGTGGGTGAAATGGTCCAAGTTTTAGTTGTGAAGTCAATGTTTCCTGACAAGACATCTCTAAGTATTGCAGACCTCGAAAGTGAGCCCGGCCTCTTTATATCGAACAAAGAGAAAGTATTTTCAGAGGCCAAGATCATGGCGAAGAAGTTCAGGCAAAAGCTACCTGCGGTCGAAGGCATTCCCTGGCCAGAACCTGCTCCAACTATTGATCTTCTGTTTGAAAATGAATCGAACATGTATGCAAATTGGAAGTGGTTCAAATTCGAAAGGTAG

Protein sequence

MKFFKSKDSVEEEEEEEKTLQAFEEKIDGDDETEKANKLNVEYYEPKPRDVVVDVVVPGIENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDGAVSRGPGPVRPVVETGTEFCLLWFWEGHSVVVHCSRQEVGEMVQVLVVKSMFPDKTSLSIADLESEPGLFISNKEKVFSEAKIMAKKFRQKLPAVEGIPWPEPAPTIDLLFENESNMYANWKWFKFER
Homology
BLAST of Lcy09g010010 vs. ExPASy Swiss-Prot
Match: Q9M9H4 (Protein PIGMENT DEFECTIVE 338, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PDE338 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.1e-40
Identity = 130/393 (33.08%), Postives = 178/393 (45.29%), Query Frame = 0

Query: 5   KSKDSVEEEEEEEKTLQAF------EEKIDG--DDETEKANKLNVEYYEPKPRDVVVDVV 64
           KS++    + +++  L+ F      EE+ +G   + +++ ++++VEYY+PKP D VV VV
Sbjct: 106 KSENEESGKADDDAILEPFLKFFKPEEEGEGIESEVSDETDRVSVEYYDPKPGDFVVGVV 165

Query: 65  VPGIENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDG 124
           V G ENKLD+N+GAD+LGTMLTKE+LPLYDKE+++L+CDL  DAE F+VNGKMG+V  D 
Sbjct: 166 VSGNENKLDVNIGADMLGTMLTKEILPLYDKELDYLLCDLKYDAEEFLVNGKMGIVKDDD 225

Query: 125 ---AVSRGPGPVRPVVETGTEFC----------------------LLWF----------- 184
               ++      RPVVE GT                         + W            
Sbjct: 226 EGVEIAEFARQGRPVVEIGTVVFAEVLGRTLSGRPLLSSRRYFRRIAWHRVRQIKQLNEP 285

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 286 IEVKITEWNTGGLLTRIEGLRAFIPKQELVKKVNTFTELKENVGRRFLVQITRLNEDKND 345

BLAST of Lcy09g010010 vs. ExPASy TrEMBL
Match: A0A6J1JY23 (uncharacterized protein LOC111489862 OS=Cucurbita maxima OX=3661 GN=LOC111489862 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.5e-82
Identity = 199/386 (51.55%), Postives = 212/386 (54.92%), Query Frame = 0

Query: 1   MKFFKSKDSVEEEEEEEKTLQAFEEKIDGDDETEKANKLNVEYYEPKPRDVVVDVVVPGI 60
           MKFFK+ DSVEEEEEEEK ++AFEEKIDGD+E  KANKLNVEYYEPKP DVVV VVV G 
Sbjct: 140 MKFFKNTDSVEEEEEEEKAVRAFEEKIDGDEEIVKANKLNVEYYEPKPGDVVVGVVVSGN 199

Query: 61  ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDGAVSR 120
           ENKLDINVGADLLGTMLTKEVLPLYDKE+EFLMCDLD DAESFM+NGKMGLV YD AVSR
Sbjct: 200 ENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKDAESFMMNGKMGLVKYDDAVSR 259

Query: 121 GPGPVRPVVETGTEFC----------------------LLWF------------------ 180
           GPGP RPVVETGT                         L W                   
Sbjct: 260 GPGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKRLDEPIEVKISE 319

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 320 WNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQIMRIDEAKNDLILSERQ 379

Query: 241 -WE-----------------------------GHSVVVHCSR------------QEVGEM 245
            WE                               S ++H S               VGE 
Sbjct: 380 AWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEK 439

BLAST of Lcy09g010010 vs. ExPASy TrEMBL
Match: A0A6J1FMS2 (uncharacterized protein LOC111445605 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445605 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.3e-81
Identity = 198/386 (51.30%), Postives = 211/386 (54.66%), Query Frame = 0

Query: 1   MKFFKSKDSVEEEEEEEKTLQAFEEKIDGDDETEKANKLNVEYYEPKPRDVVVDVVVPGI 60
           MKFFK+ D+VEEEEEEEK ++AFEEKIDGD+E  KANKLNVEYYEPKP DVVV VVV G 
Sbjct: 140 MKFFKNTDAVEEEEEEEKAVRAFEEKIDGDEEIVKANKLNVEYYEPKPGDVVVGVVVSGN 199

Query: 61  ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDGAVSR 120
           ENKLDINVGADLLGTMLTKEVLPLYDKE+EFLMCDLD DAESFM+NGKMGLV YD AVSR
Sbjct: 200 ENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKDAESFMMNGKMGLVKYDDAVSR 259

Query: 121 GPGPVRPVVETGTEFC----------------------LLWF------------------ 180
           G GP RPVVETGT                         L W                   
Sbjct: 260 GLGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKRLDEPIEVKISE 319

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 320 WNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQIMRIDEAKNDLILSERQ 379

Query: 241 -WE-----------------------------GHSVVVHCSR------------QEVGEM 245
            WE                               S ++H S               VGE 
Sbjct: 380 AWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEK 439

BLAST of Lcy09g010010 vs. ExPASy TrEMBL
Match: A0A5A7TVE5 (30S ribosomal protein S1-like protein A isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G001510 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 7.1e-80
Identity = 194/386 (50.26%), Postives = 211/386 (54.66%), Query Frame = 0

Query: 1   MKFFKSKDSVEEEEEEEKTLQAFEEKIDGDDETEKANKLNVEYYEPKPRDVVVDVVVPGI 60
           MKFFK+KDS +E+EEE+K L+AFEEKIDGDDETE ANKLNVEYYEPKP DVVV VVV G 
Sbjct: 167 MKFFKNKDSADEKEEEDKALRAFEEKIDGDDETEIANKLNVEYYEPKPGDVVVGVVVSGN 226

Query: 61  ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDGAVSR 120
           ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLD DAESFM+NGKMGLV Y+ A SR
Sbjct: 227 ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDKDAESFMMNGKMGLVKYEDAFSR 286

Query: 121 GPGPVRPVVETGTEFC----------------------LLWF------------------ 180
           G GP RPVVE GT                         L W                   
Sbjct: 287 GQGPGRPVVENGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKGLDEPIEVKISE 346

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 347 WNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQITRIDEAKNDLILSEKQ 406

Query: 241 -WE-----------------------------GHSVVVHCSR------------QEVGEM 245
            WE                               S ++H S               VGE 
Sbjct: 407 AWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLTVGEK 466

BLAST of Lcy09g010010 vs. ExPASy TrEMBL
Match: A0A5D3BZ92 (30S ribosomal protein S1-like protein A isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00960 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 7.1e-80
Identity = 194/386 (50.26%), Postives = 211/386 (54.66%), Query Frame = 0

Query: 1   MKFFKSKDSVEEEEEEEKTLQAFEEKIDGDDETEKANKLNVEYYEPKPRDVVVDVVVPGI 60
           MKFFK+KDS +E+EEE+K L+AFEEKIDGDDETE ANKLNVEYYEPKP DVVV VVV G 
Sbjct: 129 MKFFKNKDSADEKEEEDKALRAFEEKIDGDDETEIANKLNVEYYEPKPGDVVVGVVVSGN 188

Query: 61  ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDGAVSR 120
           ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLD DAESFM+NGKMGLV Y+ A SR
Sbjct: 189 ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDKDAESFMMNGKMGLVKYEDAFSR 248

Query: 121 GPGPVRPVVETGTEFC----------------------LLWF------------------ 180
           G GP RPVVE GT                         L W                   
Sbjct: 249 GQGPGRPVVENGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKGLDEPIEVKISE 308

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 309 WNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQITRIDEAKNDLILSEKQ 368

Query: 241 -WE-----------------------------GHSVVVHCSR------------QEVGEM 245
            WE                               S ++H S               VGE 
Sbjct: 369 AWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLTVGEK 428

BLAST of Lcy09g010010 vs. ExPASy TrEMBL
Match: A0A1S4E163 (30S ribosomal protein S1 homolog A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496585 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 7.1e-80
Identity = 194/386 (50.26%), Postives = 211/386 (54.66%), Query Frame = 0

Query: 1   MKFFKSKDSVEEEEEEEKTLQAFEEKIDGDDETEKANKLNVEYYEPKPRDVVVDVVVPGI 60
           MKFFK+KDS +E+EEE+K L+AFEEKIDGDDETE ANKLNVEYYEPKP DVVV VVV G 
Sbjct: 129 MKFFKNKDSADEKEEEDKALRAFEEKIDGDDETEIANKLNVEYYEPKPGDVVVGVVVSGN 188

Query: 61  ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDGAVSR 120
           ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLD DAESFM+NGKMGLV Y+ A SR
Sbjct: 189 ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDKDAESFMMNGKMGLVKYEDAFSR 248

Query: 121 GPGPVRPVVETGTEFC----------------------LLWF------------------ 180
           G GP RPVVE GT                         L W                   
Sbjct: 249 GQGPGRPVVENGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKGLDEPIEVKISE 308

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 309 WNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQITRIDEAKNDLILSEKQ 368

Query: 241 -WE-----------------------------GHSVVVHCSR------------QEVGEM 245
            WE                               S ++H S               VGE 
Sbjct: 369 AWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLTVGEK 428

BLAST of Lcy09g010010 vs. NCBI nr
Match: XP_038886053.1 (protein PIGMENT DEFECTIVE 338, chloroplastic [Benincasa hispida])

HSP 1 Score: 317.4 bits (812), Expect = 1.1e-82
Identity = 198/386 (51.30%), Postives = 213/386 (55.18%), Query Frame = 0

Query: 1   MKFFKSKDSVEEEEEEEKTLQAFEEKIDGDDETEKANKLNVEYYEPKPRDVVVDVVVPGI 60
           MKFFK+KDS +EEEEEEK L+AFEEKIDGDDETEK NKLNVEYYEPKP DVVV VVV G 
Sbjct: 145 MKFFKTKDSADEEEEEEKALRAFEEKIDGDDETEKGNKLNVEYYEPKPGDVVVGVVVSGN 204

Query: 61  ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDGAVSR 120
           ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLD DAESFM+NGKMGLV Y+ A SR
Sbjct: 205 ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDKDAESFMMNGKMGLVKYEDAFSR 264

Query: 121 GPGPVRPVVETGTEFC----------------------LLWF------------------ 180
           GPGP RPVVETGT                         L W                   
Sbjct: 265 GPGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKRLDEPIEVKISE 324

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 325 WNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQITRIDEAKNDLILSERQ 384

Query: 241 -WE-----------------------------GHSVVVHCSR------------QEVGEM 245
            WE                               S ++H S               VGE 
Sbjct: 385 AWESLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEK 444

BLAST of Lcy09g010010 vs. NCBI nr
Match: KAG6578864.1 (Protein PIGMENT DEFECTIVE 338, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316.6 bits (810), Expect = 1.8e-82
Identity = 196/375 (52.27%), Postives = 211/375 (56.27%), Query Frame = 0

Query: 1   MKFFKSKDSVEEEEEEEKTLQAFEEKIDGDDETEKANKLNVEYYEPKPRDVVVDVVVPGI 60
           MKFFK+ D+VEEEEEEEK ++AFEEKIDGD+E  KANKLNVEYYEPKP D+VV VVV G 
Sbjct: 140 MKFFKNTDAVEEEEEEEKAVRAFEEKIDGDEEIVKANKLNVEYYEPKPGDIVVGVVVSGN 199

Query: 61  ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDGAVSR 120
           ENKLDINVGADLLGTMLTKEVLPL+DKE+EFLMCDLD DAESFM+NGKMGLV YD A SR
Sbjct: 200 ENKLDINVGADLLGTMLTKEVLPLHDKEVEFLMCDLDKDAESFMMNGKMGLVKYDDAFSR 259

Query: 121 GPGPVRPVVETGTEFC----------------------LLWF------------------ 180
           GPGP RPVVETGT                         L W                   
Sbjct: 260 GPGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKRLDEPIEVKISE 319

Query: 181 --------------------------------------------------WE-------- 240
                                                             WE        
Sbjct: 320 WNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVNEAKNDLILSERQAWETLYLREGT 379

Query: 241 ---------------------GHSVVVHCSR------------QEVGEMVQVLVVKSMFP 245
                                  S ++H S               VGE V+VLVVKSMFP
Sbjct: 380 LLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEKVKVLVVKSMFP 439

BLAST of Lcy09g010010 vs. NCBI nr
Match: XP_022994056.1 (uncharacterized protein LOC111489862 [Cucurbita maxima])

HSP 1 Score: 315.8 bits (808), Expect = 3.2e-82
Identity = 199/386 (51.55%), Postives = 212/386 (54.92%), Query Frame = 0

Query: 1   MKFFKSKDSVEEEEEEEKTLQAFEEKIDGDDETEKANKLNVEYYEPKPRDVVVDVVVPGI 60
           MKFFK+ DSVEEEEEEEK ++AFEEKIDGD+E  KANKLNVEYYEPKP DVVV VVV G 
Sbjct: 140 MKFFKNTDSVEEEEEEEKAVRAFEEKIDGDEEIVKANKLNVEYYEPKPGDVVVGVVVSGN 199

Query: 61  ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDGAVSR 120
           ENKLDINVGADLLGTMLTKEVLPLYDKE+EFLMCDLD DAESFM+NGKMGLV YD AVSR
Sbjct: 200 ENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKDAESFMMNGKMGLVKYDDAVSR 259

Query: 121 GPGPVRPVVETGTEFC----------------------LLWF------------------ 180
           GPGP RPVVETGT                         L W                   
Sbjct: 260 GPGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKRLDEPIEVKISE 319

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 320 WNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQIMRIDEAKNDLILSERQ 379

Query: 241 -WE-----------------------------GHSVVVHCSR------------QEVGEM 245
            WE                               S ++H S               VGE 
Sbjct: 380 AWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEK 439

BLAST of Lcy09g010010 vs. NCBI nr
Match: XP_023551503.1 (uncharacterized protein LOC111809291 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.8 bits (808), Expect = 3.2e-82
Identity = 199/386 (51.55%), Postives = 212/386 (54.92%), Query Frame = 0

Query: 1   MKFFKSKDSVEEEEEEEKTLQAFEEKIDGDDETEKANKLNVEYYEPKPRDVVVDVVVPGI 60
           MKFFK+ D+VEEEEEEEK ++AFEEKIDGD+E  KA KLNVEYYEPKP DVVV VVV G 
Sbjct: 140 MKFFKNTDAVEEEEEEEKAVRAFEEKIDGDEEIVKATKLNVEYYEPKPGDVVVGVVVSGN 199

Query: 61  ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDGAVSR 120
           ENKLDINVGADLLGTMLTKEVLPLYDKE+EFLMCDLD DAESFM+NGKMGLV YD AVSR
Sbjct: 200 ENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKDAESFMMNGKMGLVKYDDAVSR 259

Query: 121 GPGPVRPVVETGTEFC----------------------LLWF------------------ 180
           GPGP RPVVETGT                         L W                   
Sbjct: 260 GPGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKRLDEPIEVKISE 319

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 320 WNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQIMRIDEAKNDLILSERQ 379

Query: 241 -WE-----------------------------GHSVVVHCSR------------QEVGEM 245
            WE                               S ++H S               VGE 
Sbjct: 380 AWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEK 439

BLAST of Lcy09g010010 vs. NCBI nr
Match: KAG7016396.1 (30S ribosomal protein S1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315.5 bits (807), Expect = 4.1e-82
Identity = 198/386 (51.30%), Postives = 211/386 (54.66%), Query Frame = 0

Query: 1   MKFFKSKDSVEEEEEEEKTLQAFEEKIDGDDETEKANKLNVEYYEPKPRDVVVDVVVPGI 60
           MKFFKS D+VEEEEEEEK ++AFEEKIDGD+E  KANKLNVEYYEPKP D+VV VVV G 
Sbjct: 140 MKFFKSTDAVEEEEEEEKAVRAFEEKIDGDEEIVKANKLNVEYYEPKPGDIVVGVVVSGN 199

Query: 61  ENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDGAVSR 120
           ENKLDINVGADLLGTMLTKEVLPLYDKE+EFLMCDLD DAESFM+NGKMGLV YD A SR
Sbjct: 200 ENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKDAESFMMNGKMGLVKYDDAFSR 259

Query: 121 GPGPVRPVVETGTEFC----------------------LLWF------------------ 180
           GPGP RPVVETGT                         L W                   
Sbjct: 260 GPGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKRLDEPIEVKISE 319

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 320 WNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQIMRIDEAKNDLILSERQ 379

Query: 241 -WE-----------------------------GHSVVVHCSR------------QEVGEM 245
            WE                               S ++H S               VGE 
Sbjct: 380 AWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEK 439

BLAST of Lcy09g010010 vs. TAIR 10
Match: AT1G71720.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 166.4 bits (420), Expect = 2.9e-41
Identity = 130/393 (33.08%), Postives = 178/393 (45.29%), Query Frame = 0

Query: 5   KSKDSVEEEEEEEKTLQAF------EEKIDG--DDETEKANKLNVEYYEPKPRDVVVDVV 64
           KS++    + +++  L+ F      EE+ +G   + +++ ++++VEYY+PKP D VV VV
Sbjct: 106 KSENEESGKADDDAILEPFLKFFKPEEEGEGIESEVSDETDRVSVEYYDPKPGDFVVGVV 165

Query: 65  VPGIENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDLDNDAESFMVNGKMGLVIYDG 124
           V G ENKLD+N+GAD+LGTMLTKE+LPLYDKE+++L+CDL  DAE F+VNGKMG+V  D 
Sbjct: 166 VSGNENKLDVNIGADMLGTMLTKEILPLYDKELDYLLCDLKYDAEEFLVNGKMGIVKDDD 225

Query: 125 ---AVSRGPGPVRPVVETGTEFC----------------------LLWF----------- 184
               ++      RPVVE GT                         + W            
Sbjct: 226 EGVEIAEFARQGRPVVEIGTVVFAEVLGRTLSGRPLLSSRRYFRRIAWHRVRQIKQLNEP 285

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 286 IEVKITEWNTGGLLTRIEGLRAFIPKQELVKKVNTFTELKENVGRRFLVQITRLNEDKND 345

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M9H44.1e-4033.08Protein PIGMENT DEFECTIVE 338, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=... [more]
Match NameE-valueIdentityDescription
A0A6J1JY231.5e-8251.55uncharacterized protein LOC111489862 OS=Cucurbita maxima OX=3661 GN=LOC111489862... [more]
A0A6J1FMS21.3e-8151.30uncharacterized protein LOC111445605 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A5A7TVE57.1e-8050.2630S ribosomal protein S1-like protein A isoform X2 OS=Cucumis melo var. makuwa O... [more]
A0A5D3BZ927.1e-8050.2630S ribosomal protein S1-like protein A isoform X2 OS=Cucumis melo var. makuwa O... [more]
A0A1S4E1637.1e-8050.2630S ribosomal protein S1 homolog A isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
Match NameE-valueIdentityDescription
XP_038886053.11.1e-8251.30protein PIGMENT DEFECTIVE 338, chloroplastic [Benincasa hispida][more]
KAG6578864.11.8e-8252.27Protein PIGMENT DEFECTIVE 338, chloroplastic, partial [Cucurbita argyrosperma su... [more]
XP_022994056.13.2e-8251.55uncharacterized protein LOC111489862 [Cucurbita maxima][more]
XP_023551503.13.2e-8251.55uncharacterized protein LOC111809291 [Cucurbita pepo subsp. pepo][more]
KAG7016396.14.1e-8251.3030S ribosomal protein S1, chloroplastic [Cucurbita argyrosperma subsp. argyrospe... [more]
Match NameE-valueIdentityDescription
AT1G71720.12.9e-4133.08Nucleic acid-binding proteins superfamily [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR15838NUCLEOLAR PROTEIN OF 40 KDAcoord: 2..133
NoneNo IPR availablePANTHERPTHR15838:SF3F14O23.10 PROTEINcoord: 154..244
NoneNo IPR availablePANTHERPTHR15838:SF3F14O23.10 PROTEINcoord: 2..133
NoneNo IPR availablePANTHERPTHR15838NUCLEOLAR PROTEIN OF 40 KDAcoord: 154..244

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g010010.1Lcy09g010010.1mRNA