Lcy09g008640 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g008640
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase
Location	Chr09: 8120847 .. 8122178 (-)
RNA-Seq Expression	Lcy09g008640
Synteny	Lcy09g008640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCTGAGAGTGATAGGTGTCGCAGGTTTGAGAGAGGGCTGCGTTTTGAGATACGTACCCCAGTTACTACTATTGCCAAGTGGACGGATTTTTCCCAACTAGTAGAGATTGCCTTACGTGTGGAGCAGAGTATTATAGAGGAAAAGTCGACATTGGAGCCTAGTCGTGGGGTTTCAACAGCTACTGGTTTCCGAGGTCGTGAGCAGCGAAGGTTCACACCAGGAGTGAATGTTTCAGGCCATCAAGACTTCAAGCGTCGATCTGGTGGCCAGTCATCGAGGCAAATGAGTTCGGGTAGTGCCTATCAGAGGTAGAGTCAGAGAGCCCCCGTCAGTATGCGAGTTCAATAGTAAGACCGCGGACGGGTCAGGAGTCCGTTGCTAGTGAATTCAGGAGAACCCCATGTGCAAGTTGTGGCAAGAATCATCGGGGTCAGTGTCTTGTTGGCGCCGGTGTGTGTTACTAGTGTGGACAACCAGGGCATTTCTAGAGGGATTGTCCACAGCTGAGGGCAGCAGTTCAGAGGGACCAGGGAGTTGAGTCCCACACAGTTGAGCAATCGAGAGTCTCAGCAGCCGCAGGAGAGGGCACTAGTGGTGCAAGGCAAAAGGGAGTTGTGGGGAGACCTAGGCAGCAAGTAAAAGTCTACGCCATGACTCAACAGGAAGCAGAGGATGCACCAGACGTGATTACTAGTACGATTTTGATTTGTAATGTACCTGCACGTGTTTTATTAGATCCAGGTGCTACGCATTCCTTTGTTTCTAGTATGTTTCTAACTAAGCTGAATAGGATGCTAGAGCCTTTATCTGAGGAGTTAGTCATATACACTCCAGTTGGTGACATTTTATTAGTCAATGAAGTGTTGCGTGATTGCGAGGTTGTAGTAGAAGGTCTCTGTATGTTAGTAGATCTTCTTCCCCTAGAGTTGCAGGCATTTGATGTAATTCTAGGAATGGATTTCTTATTCACTCACTATTCTTCTATGGATTGCCATAGGACAGAAGTGACCTTTAGGAAACCAGGTTTGACTGAAGTTGTTTTTCAGGGGTGAGAGGAAGATTATTCCTACGAGTTTGATTTCAGCTCTGAAAGCTTAGAAGTTGTTGAGGAAGGGTTGCACAGCGTTTCTTGCACACGTAGTAGAGGTGCAATAAGAAAAGCTGAAACCAGAAGATGTTCCTGTGGTGAACGAATTTCTTGATGTTTTTCCAGATAATCTATCGGGTTTGCCACCTGATAGAGAGGTGGAGTTCACTATTGAATTGTTACCAGGAAGAACACCTATTTCACAAGGCACCGTACAGAATGGCTCCAAGCGAGCTTAA

mRNA sequence

ATGGCATCTGAGAGTGATAGGTGTCGCAGGTTTGAGAGAGGGCTGCGTTTTGAGATACGTACCCCAGTTACTACTATTGCCAAGTGGACGGATTTTTCCCAACTAGTAGAGATTGCCTTACGTGTGGAGCAGAGTATTATAGAGGAAAAGTCGACATTGGAGCCTAGTCGTGGGGTTTCAACAGCTACTGGTTTCCGAGGTCGTGAGCAGCGAAGGTTCACACCAGGAGTGAATGTTTCAGGCCATCAAGACTTCAAGCGTCGATCTGGTGGCCAGTCATCGAGGCAAATGAGTTCGGGTAGTGCCTATCAGAGGAGTCCGTTGCTAGTGAATTCAGGAGAACCCCATGTGCAAGTTGTGGCAAGAATCATCGGGCTGAGGGCAGCAGTTCAGAGGGACCAGGGAGTTGAGTCCCACACAGTTGAGCAATCGAGAGTCTCAGCAGCCGCAGGAGAGGGCACTAGTGGTGCAAGGCAAAAGGGAGTTGTGGGGAGACCTAGGCAGCAAGTAAAAGTCTACGCCATGACTCAACAGGAAGCAGAGGATGCACCAGACGTGATTACTAGTACGATTTTGATTTGTAATGTACCTGCACGTGTTTTATTAGATCCAGGTGCTACGCATTCCTTTGTTTCTAGTATGTTTCTAACTAAGCTGAATAGGATGCTAGAGCCTTTATCTGAGGAGTTAGTCATATACACTCCAGTTGGTGACATTTTATTAGTCAATGAAGTGTTGCGTGATTGCGAGGTTGTAGTAGAAGGTCTCTGTATGTTAGTAGATCTTCTTCCCCTAGAGTTGCAGGCATTTGATGTAATTCTAGGAATGGATTTCTTATTCACTCACTATTCTTCTATGGATTGCCATAGGACAGAAGTGACCTTTAGGAAACCAGATAATCTATCGGGTTTGCCACCTGATAGAGAGGTGGAGTTCACTATTGAATTGTTACCAGGAAGAACACCTATTTCACAAGGCACCGTACAGAATGGCTCCAAGCGAGCTTAA

Coding sequence (CDS)

ATGGCATCTGAGAGTGATAGGTGTCGCAGGTTTGAGAGAGGGCTGCGTTTTGAGATACGTACCCCAGTTACTACTATTGCCAAGTGGACGGATTTTTCCCAACTAGTAGAGATTGCCTTACGTGTGGAGCAGAGTATTATAGAGGAAAAGTCGACATTGGAGCCTAGTCGTGGGGTTTCAACAGCTACTGGTTTCCGAGGTCGTGAGCAGCGAAGGTTCACACCAGGAGTGAATGTTTCAGGCCATCAAGACTTCAAGCGTCGATCTGGTGGCCAGTCATCGAGGCAAATGAGTTCGGGTAGTGCCTATCAGAGGAGTCCGTTGCTAGTGAATTCAGGAGAACCCCATGTGCAAGTTGTGGCAAGAATCATCGGGCTGAGGGCAGCAGTTCAGAGGGACCAGGGAGTTGAGTCCCACACAGTTGAGCAATCGAGAGTCTCAGCAGCCGCAGGAGAGGGCACTAGTGGTGCAAGGCAAAAGGGAGTTGTGGGGAGACCTAGGCAGCAAGTAAAAGTCTACGCCATGACTCAACAGGAAGCAGAGGATGCACCAGACGTGATTACTAGTACGATTTTGATTTGTAATGTACCTGCACGTGTTTTATTAGATCCAGGTGCTACGCATTCCTTTGTTTCTAGTATGTTTCTAACTAAGCTGAATAGGATGCTAGAGCCTTTATCTGAGGAGTTAGTCATATACACTCCAGTTGGTGACATTTTATTAGTCAATGAAGTGTTGCGTGATTGCGAGGTTGTAGTAGAAGGTCTCTGTATGTTAGTAGATCTTCTTCCCCTAGAGTTGCAGGCATTTGATGTAATTCTAGGAATGGATTTCTTATTCACTCACTATTCTTCTATGGATTGCCATAGGACAGAAGTGACCTTTAGGAAACCAGATAATCTATCGGGTTTGCCACCTGATAGAGAGGTGGAGTTCACTATTGAATTGTTACCAGGAAGAACACCTATTTCACAAGGCACCGTACAGAATGGCTCCAAGCGAGCTTAA

Protein sequence

MASESDRCRRFERGLRFEIRTPVTTIAKWTDFSQLVEIALRVEQSIIEEKSTLEPSRGVSTATGFRGREQRRFTPGVNVSGHQDFKRRSGGQSSRQMSSGSAYQRSPLLVNSGEPHVQVVARIIGLRAAVQRDQGVESHTVEQSRVSAAAGEGTSGARQKGVVGRPRQQVKVYAMTQQEAEDAPDVITSTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLSEELVIYTPVGDILLVNEVLRDCEVVVEGLCMLVDLLPLELQAFDVILGMDFLFTHYSSMDCHRTEVTFRKPDNLSGLPPDREVEFTIELLPGRTPISQGTVQNGSKRA

Homology

[Close]

BLAST of Lcy09g008640 vs. ExPASy TrEMBL
Match: A0A5A7UJV1 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold221G00430 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 6.0e-130
Identity = 269/395 (68.10%), Postives = 287/395 (72.66%), Query Frame = 0


Query: 1   MASESDRCRRFERGLRFEIRTPVTTIAKWTDFSQLVEIALRVEQSIIEEKSTLEPSRGVS 60
           +ASESDRCRRFERGLRFE+RTPVT IAKWT+FSQLVE ALRVEQSI+EEKS +E SRGVS
Sbjct: 194 VASESDRCRRFERGLRFELRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSAMELSRGVS 253

Query: 61  TATGFRGREQRRFTPGVNVSGHQDFKRRSGGQSSRQMSSGSAYQRSPLLVNSGEPHVQVV 120
           T +G RGREQRRFTPGVNVSG QDFKRRSGG+  RQMSSG+AYQR     +S   +    
Sbjct: 254 TTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGTAYQRQSQRASSQSANSVAR 313

Query: 121 AR-------IIGLRAAVQRDQGVESHTVEQSRVSAAAGEGTSGARQKGVVGRPRQQVKVY 180
           +R          LR AV+RDQGVESHTVEQ R+S AAGEGTSGARQK VVGRPRQQ KVY
Sbjct: 314 SRTRHFKRDCPQLRVAVRRDQGVESHTVEQPRISIAAGEGTSGARQKEVVGRPRQQGKVY 373

Query: 181 AMTQQEAEDAPDVITSTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLSEELVIY 240
           AMTQQEAEDA DVIT TILICNVPARVLLD GATHSFVSSMFLTKLNRMLEPLSEELVI 
Sbjct: 374 AMTQQEAEDALDVITGTILICNVPARVLLDSGATHSFVSSMFLTKLNRMLEPLSEELVIC 433

Query: 241 TPVGDILLVNEVLRDCEVVVEGLCMLVDLLPLELQAFDVILGMDFLFTHYSSMDCHRTEV 300
           TPVGD+LLV+EVLRDCEVVVEGLCMLVDL PLELQA DVILGMDFLFTHY+SM+CHR EV
Sbjct: 434 TPVGDVLLVSEVLRDCEVVVEGLCMLVDLFPLELQALDVILGMDFLFTHYASMNCHRKEV 493

Query: 301 TFRKPD------------------------------------------------------ 326
           TFRKP                                                       
Sbjct: 494 TFRKPGLTEVVFRGERKIIPTSLTSALKVEKLLRKGCTTFLAHVVEVQEEKLKPEEVPVV 553

[Close]

BLAST of Lcy09g008640 vs. ExPASy TrEMBL
Match: A0A5D3CCC7 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00430 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 6.0e-130
Identity = 269/395 (68.10%), Postives = 287/395 (72.66%), Query Frame = 0


Query: 1   MASESDRCRRFERGLRFEIRTPVTTIAKWTDFSQLVEIALRVEQSIIEEKSTLEPSRGVS 60
           +ASESDRCRRFERGLRFE+RTPVT IAKWT+FSQLVE ALRVEQSI+EEKS +E SRGVS
Sbjct: 194 VASESDRCRRFERGLRFELRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSAMELSRGVS 253

Query: 61  TATGFRGREQRRFTPGVNVSGHQDFKRRSGGQSSRQMSSGSAYQRSPLLVNSGEPHVQVV 120
           T +G RGREQRRFTPGVNVSG QDFKRRSGG+  RQMSSG+AYQR     +S   +    
Sbjct: 254 TTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGTAYQRQSQRASSQSANSVAR 313

Query: 121 AR-------IIGLRAAVQRDQGVESHTVEQSRVSAAAGEGTSGARQKGVVGRPRQQVKVY 180
           +R          LR AV+RDQGVESHTVEQ R+S AAGEGTSGARQK VVGRPRQQ KVY
Sbjct: 314 SRTRHFKRDCPQLRVAVRRDQGVESHTVEQPRISIAAGEGTSGARQKEVVGRPRQQGKVY 373

Query: 181 AMTQQEAEDAPDVITSTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLSEELVIY 240
           AMTQQEAEDA DVIT TILICNVPARVLLD GATHSFVSSMFLTKLNRMLEPLSEELVI 
Sbjct: 374 AMTQQEAEDALDVITGTILICNVPARVLLDSGATHSFVSSMFLTKLNRMLEPLSEELVIC 433

Query: 241 TPVGDILLVNEVLRDCEVVVEGLCMLVDLLPLELQAFDVILGMDFLFTHYSSMDCHRTEV 300
           TPVGD+LLV+EVLRDCEVVVEGLCMLVDL PLELQA DVILGMDFLFTHY+SM+CHR EV
Sbjct: 434 TPVGDVLLVSEVLRDCEVVVEGLCMLVDLFPLELQALDVILGMDFLFTHYASMNCHRKEV 493

Query: 301 TFRKPD------------------------------------------------------ 326
           TFRKP                                                       
Sbjct: 494 TFRKPGLTEVVFRGERKIIPTSLTSALKVEKLLRKGCTTFLAHVVEVQEEKLKPEEVPVV 553

[Close]

BLAST of Lcy09g008640 vs. ExPASy TrEMBL
Match: A0A5A7SZ16 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00980 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 4.2e-123
Identity = 255/407 (62.65%), Postives = 280/407 (68.80%), Query Frame = 0


Query: 1   MASESDRCRRFERGLRFEIRTPVTTIAKWTDFSQLVEIALRVEQSIIEEKSTLEPSRGVS 60
           +ASESDRCRRFERGLRFEIRTPVT IAKWT+FSQLVE AL VEQSI +EKS +E SRG S
Sbjct: 186 IASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALHVEQSITKEKSAVELSRGTS 245

Query: 61  TATGFRGREQRRFTPGVNVSGHQDFKRRSGGQSSRQMSSGSAYQRSPLLVNS-------- 120
           TA+GFRGREQRRFTPG+N+S  QDFK RSGGQ+SR +S GS +QR    + S        
Sbjct: 246 TASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPITSTVR 305

Query: 121 GEPHVQVVARII-------------------------------------GLRAAVQRDQG 180
            +P  + +A  +                                      L   VQRDQG
Sbjct: 306 SQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG 365

Query: 181 VESHTVEQSRVSAAAGEGTSGARQKGVVGRPRQQVKVYAMTQQEAEDAPDVITSTILICN 240
           V S TVEQSRVS    EGTSGARQKGVVGRPRQQ KVYAMTQQEAEDAPDVIT TILICN
Sbjct: 366 VGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPDVITGTILICN 425

Query: 241 VPARVLLDPGATHSFVSSMFLTKLNRMLEPLSEELVIYTPVGDILLVNEVLRDCEVVVEG 300
           VPA VL DPGATHSFVSS+FLTKLNRMLEPLSE LVIYTPVGD+LLVNEVLR+CEV+VEG
Sbjct: 426 VPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLVIYTPVGDVLLVNEVLRNCEVLVEG 485

Query: 301 LCMLVDLLPLELQAFDVILGMDFLFTHYSSMDCHRTEVTFRKP----------------- 333
           + +LVDLLPLELQ  DVILGMDFLF HY+SMDCHR EV FRKP                 
Sbjct: 486 ISLLVDLLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRS 545

[Close]

BLAST of Lcy09g008640 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 1.1e-120
Identity = 263/433 (60.74%), Postives = 284/433 (65.59%), Query Frame = 0


Query: 1   MASESDRCRRFERGLRFEIRTPVTTIAKWTDFSQLVEIALRVEQSIIEEKSTLEPSRGVS 60
           +ASESDRC RFERGLRFEIRTPVT IAKW +FSQLVE ALRV+QSI+EEKS +E SRGVS
Sbjct: 402 VASESDRCHRFERGLRFEIRTPVTAIAKWMNFSQLVETALRVKQSIVEEKSAMELSRGVS 461

Query: 61  TATGFRGREQRRFTPGVNVSGHQDFKRRSGGQSSRQMSSGSAYQRSPLLVNS-------- 120
           T +G RGREQRRFTPGVNVSG QDFKRRSGG+  RQMSSGSAYQR     +S        
Sbjct: 462 TTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAYQRQSRRASSQPANSVAR 521

Query: 121 ---GEPHVQVVAR---------------IIG-------------------LRAAVQRDQG 180
              G+  V   ++               +IG                   LR  V+RDQG
Sbjct: 522 SRTGQESVASESKRTPCVSCGKSHQGRCVIGAGVCYQCGKTGHFKRDCPQLRVVVRRDQG 581

Query: 181 VESHTVEQSRVSAAAGEGTSGARQKGVVGRPRQQVKVYAMTQQEAEDAPDVITSTILICN 240
           VESHTVEQSR+S AAGE TSGARQKGVVGRPRQQ KVYAMTQQEAEDAPDVIT TILICN
Sbjct: 582 VESHTVEQSRISTAAGEETSGARQKGVVGRPRQQGKVYAMTQQEAEDAPDVITETILICN 641

Query: 241 VPARVLLDPGATHSFVSSMFLTKLNRMLEPLSEELVIYTPVGDILLVNEVLRDCEVVVEG 300
           VP RVLLD GATHSFVSSMFLTK+NRMLEPL EELVI TPVGD+LLV+EVL DCEVVVEG
Sbjct: 642 VPTRVLLDSGATHSFVSSMFLTKINRMLEPLPEELVICTPVGDVLLVSEVLCDCEVVVEG 701

Query: 301 LCMLVDLLPLELQAFDVILGMDFLFTHYSSMDCHRTEVTFRKPD---------------- 326
           L M VDLLPLELQ  DVILGMDFLFTHY+SM+CHR EVTF+KP                 
Sbjct: 702 LYMSVDLLPLELQTLDVILGMDFLFTHYASMNCHRKEVTFKKPGSTEVIFKGERNIIPTS 761

[Close]

BLAST of Lcy09g008640 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 1.1e-120
Identity = 263/433 (60.74%), Postives = 284/433 (65.59%), Query Frame = 0


Query: 1   MASESDRCRRFERGLRFEIRTPVTTIAKWTDFSQLVEIALRVEQSIIEEKSTLEPSRGVS 60
           +ASESDRC RFERGLRFEIRTPVT IAKW +FSQLVE ALRV+QSI+EEKS +E SRGVS
Sbjct: 402 VASESDRCHRFERGLRFEIRTPVTAIAKWMNFSQLVETALRVKQSIVEEKSAMELSRGVS 461

Query: 61  TATGFRGREQRRFTPGVNVSGHQDFKRRSGGQSSRQMSSGSAYQRSPLLVNS-------- 120
           T +G RGREQRRFTPGVNVSG QDFKRRSGG+  RQMSSGSAYQR     +S        
Sbjct: 462 TTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAYQRQSRRASSQPANSVAR 521

Query: 121 ---GEPHVQVVAR---------------IIG-------------------LRAAVQRDQG 180
              G+  V   ++               +IG                   LR  V+RDQG
Sbjct: 522 SRTGQESVASESKRTPCVSCGKSHQGRCVIGAGVCYQCGKTGHFKRDCPQLRVVVRRDQG 581

Query: 181 VESHTVEQSRVSAAAGEGTSGARQKGVVGRPRQQVKVYAMTQQEAEDAPDVITSTILICN 240
           VESHTVEQSR+S AAGE TSGARQKGVVGRPRQQ KVYAMTQQEAEDAPDVIT TILICN
Sbjct: 582 VESHTVEQSRISTAAGEETSGARQKGVVGRPRQQGKVYAMTQQEAEDAPDVITETILICN 641

Query: 241 VPARVLLDPGATHSFVSSMFLTKLNRMLEPLSEELVIYTPVGDILLVNEVLRDCEVVVEG 300
           VP RVLLD GATHSFVSSMFLTK+NRMLEPL EELVI TPVGD+LLV+EVL DCEVVVEG
Sbjct: 642 VPTRVLLDSGATHSFVSSMFLTKINRMLEPLPEELVICTPVGDVLLVSEVLCDCEVVVEG 701

Query: 301 LCMLVDLLPLELQAFDVILGMDFLFTHYSSMDCHRTEVTFRKPD---------------- 326
           L M VDLLPLELQ  DVILGMDFLFTHY+SM+CHR EVTF+KP                 
Sbjct: 702 LYMSVDLLPLELQTLDVILGMDFLFTHYASMNCHRKEVTFKKPGSTEVIFKGERNIIPTS 761

[Close]

BLAST of Lcy09g008640 vs. NCBI nr
Match: TYK08952.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 473.8 bits (1218), Expect = 1.2e-129
Identity = 269/395 (68.10%), Postives = 287/395 (72.66%), Query Frame = 0


Query: 1   MASESDRCRRFERGLRFEIRTPVTTIAKWTDFSQLVEIALRVEQSIIEEKSTLEPSRGVS 60
           +ASESDRCRRFERGLRFE+RTPVT IAKWT+FSQLVE ALRVEQSI+EEKS +E SRGVS
Sbjct: 194 VASESDRCRRFERGLRFELRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSAMELSRGVS 253

Query: 61  TATGFRGREQRRFTPGVNVSGHQDFKRRSGGQSSRQMSSGSAYQRSPLLVNSGEPHVQVV 120
           T +G RGREQRRFTPGVNVSG QDFKRRSGG+  RQMSSG+AYQR     +S   +    
Sbjct: 254 TTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGTAYQRQSQRASSQSANSVAR 313

Query: 121 AR-------IIGLRAAVQRDQGVESHTVEQSRVSAAAGEGTSGARQKGVVGRPRQQVKVY 180
           +R          LR AV+RDQGVESHTVEQ R+S AAGEGTSGARQK VVGRPRQQ KVY
Sbjct: 314 SRTRHFKRDCPQLRVAVRRDQGVESHTVEQPRISIAAGEGTSGARQKEVVGRPRQQGKVY 373

Query: 181 AMTQQEAEDAPDVITSTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLSEELVIY 240
           AMTQQEAEDA DVIT TILICNVPARVLLD GATHSFVSSMFLTKLNRMLEPLSEELVI 
Sbjct: 374 AMTQQEAEDALDVITGTILICNVPARVLLDSGATHSFVSSMFLTKLNRMLEPLSEELVIC 433

Query: 241 TPVGDILLVNEVLRDCEVVVEGLCMLVDLLPLELQAFDVILGMDFLFTHYSSMDCHRTEV 300
           TPVGD+LLV+EVLRDCEVVVEGLCMLVDL PLELQA DVILGMDFLFTHY+SM+CHR EV
Sbjct: 434 TPVGDVLLVSEVLRDCEVVVEGLCMLVDLFPLELQALDVILGMDFLFTHYASMNCHRKEV 493

Query: 301 TFRKPD------------------------------------------------------ 326
           TFRKP                                                       
Sbjct: 494 TFRKPGLTEVVFRGERKIIPTSLTSALKVEKLLRKGCTTFLAHVVEVQEEKLKPEEVPVV 553

[Close]

BLAST of Lcy09g008640 vs. NCBI nr
Match: KAA0055470.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 473.8 bits (1218), Expect = 1.2e-129
Identity = 269/395 (68.10%), Postives = 287/395 (72.66%), Query Frame = 0


Query: 1   MASESDRCRRFERGLRFEIRTPVTTIAKWTDFSQLVEIALRVEQSIIEEKSTLEPSRGVS 60
           +ASESDRCRRFERGLRFE+RTPVT IAKWT+FSQLVE ALRVEQSI+EEKS +E SRGVS
Sbjct: 194 VASESDRCRRFERGLRFELRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSAMELSRGVS 253

Query: 61  TATGFRGREQRRFTPGVNVSGHQDFKRRSGGQSSRQMSSGSAYQRSPLLVNSGEPHVQVV 120
           T +G RGREQRRFTPGVNVSG QDFKRRSGG+  RQMSSG+AYQR     +S   +    
Sbjct: 254 TTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGTAYQRQSQRASSQSANSVAR 313

Query: 121 AR-------IIGLRAAVQRDQGVESHTVEQSRVSAAAGEGTSGARQKGVVGRPRQQVKVY 180
           +R          LR AV+RDQGVESHTVEQ R+S AAGEGTSGARQK VVGRPRQQ KVY
Sbjct: 314 SRTRHFKRDCPQLRVAVRRDQGVESHTVEQPRISIAAGEGTSGARQKEVVGRPRQQGKVY 373

Query: 181 AMTQQEAEDAPDVITSTILICNVPARVLLDPGATHSFVSSMFLTKLNRMLEPLSEELVIY 240
           AMTQQEAEDA DVIT TILICNVPARVLLD GATHSFVSSMFLTKLNRMLEPLSEELVI 
Sbjct: 374 AMTQQEAEDALDVITGTILICNVPARVLLDSGATHSFVSSMFLTKLNRMLEPLSEELVIC 433

Query: 241 TPVGDILLVNEVLRDCEVVVEGLCMLVDLLPLELQAFDVILGMDFLFTHYSSMDCHRTEV 300
           TPVGD+LLV+EVLRDCEVVVEGLCMLVDL PLELQA DVILGMDFLFTHY+SM+CHR EV
Sbjct: 434 TPVGDVLLVSEVLRDCEVVVEGLCMLVDLFPLELQALDVILGMDFLFTHYASMNCHRKEV 493

Query: 301 TFRKPD------------------------------------------------------ 326
           TFRKP                                                       
Sbjct: 494 TFRKPGLTEVVFRGERKIIPTSLTSALKVEKLLRKGCTTFLAHVVEVQEEKLKPEEVPVV 553

[Close]

BLAST of Lcy09g008640 vs. NCBI nr
Match: KAA0035808.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 451.1 bits (1159), Expect = 8.6e-123
Identity = 255/407 (62.65%), Postives = 280/407 (68.80%), Query Frame = 0


Query: 1   MASESDRCRRFERGLRFEIRTPVTTIAKWTDFSQLVEIALRVEQSIIEEKSTLEPSRGVS 60
           +ASESDRCRRFERGLRFEIRTPVT IAKWT+FSQLVE AL VEQSI +EKS +E SRG S
Sbjct: 186 IASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALHVEQSITKEKSAVELSRGTS 245

Query: 61  TATGFRGREQRRFTPGVNVSGHQDFKRRSGGQSSRQMSSGSAYQRSPLLVNS-------- 120
           TA+GFRGREQRRFTPG+N+S  QDFK RSGGQ+SR +S GS +QR    + S        
Sbjct: 246 TASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPITSTVR 305

Query: 121 GEPHVQVVARII-------------------------------------GLRAAVQRDQG 180
            +P  + +A  +                                      L   VQRDQG
Sbjct: 306 SQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG 365

Query: 181 VESHTVEQSRVSAAAGEGTSGARQKGVVGRPRQQVKVYAMTQQEAEDAPDVITSTILICN 240
           V S TVEQSRVS    EGTSGARQKGVVGRPRQQ KVYAMTQQEAEDAPDVIT TILICN
Sbjct: 366 VGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPDVITGTILICN 425

Query: 241 VPARVLLDPGATHSFVSSMFLTKLNRMLEPLSEELVIYTPVGDILLVNEVLRDCEVVVEG 300
           VPA VL DPGATHSFVSS+FLTKLNRMLEPLSE LVIYTPVGD+LLVNEVLR+CEV+VEG
Sbjct: 426 VPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLVIYTPVGDVLLVNEVLRNCEVLVEG 485

Query: 301 LCMLVDLLPLELQAFDVILGMDFLFTHYSSMDCHRTEVTFRKP----------------- 333
           + +LVDLLPLELQ  DVILGMDFLF HY+SMDCHR EV FRKP                 
Sbjct: 486 ISLLVDLLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRGMRKAVSRS 545

[Close]

BLAST of Lcy09g008640 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 443.0 bits (1138), Expect = 2.3e-120
Identity = 263/433 (60.74%), Postives = 284/433 (65.59%), Query Frame = 0


Query: 1   MASESDRCRRFERGLRFEIRTPVTTIAKWTDFSQLVEIALRVEQSIIEEKSTLEPSRGVS 60
           +ASESDRC RFERGLRFEIRTPVT IAKW +FSQLVE ALRV+QSI+EEKS +E SRGVS
Sbjct: 402 VASESDRCHRFERGLRFEIRTPVTAIAKWMNFSQLVETALRVKQSIVEEKSAMELSRGVS 461

Query: 61  TATGFRGREQRRFTPGVNVSGHQDFKRRSGGQSSRQMSSGSAYQRSPLLVNS-------- 120
           T +G RGREQRRFTPGVNVSG QDFKRRSGG+  RQMSSGSAYQR     +S        
Sbjct: 462 TTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAYQRQSRRASSQPANSVAR 521

Query: 121 ---GEPHVQVVAR---------------IIG-------------------LRAAVQRDQG 180
              G+  V   ++               +IG                   LR  V+RDQG
Sbjct: 522 SRTGQESVASESKRTPCVSCGKSHQGRCVIGAGVCYQCGKTGHFKRDCPQLRVVVRRDQG 581

Query: 181 VESHTVEQSRVSAAAGEGTSGARQKGVVGRPRQQVKVYAMTQQEAEDAPDVITSTILICN 240
           VESHTVEQSR+S AAGE TSGARQKGVVGRPRQQ KVYAMTQQEAEDAPDVIT TILICN
Sbjct: 582 VESHTVEQSRISTAAGEETSGARQKGVVGRPRQQGKVYAMTQQEAEDAPDVITETILICN 641

Query: 241 VPARVLLDPGATHSFVSSMFLTKLNRMLEPLSEELVIYTPVGDILLVNEVLRDCEVVVEG 300
           VP RVLLD GATHSFVSSMFLTK+NRMLEPL EELVI TPVGD+LLV+EVL DCEVVVEG
Sbjct: 642 VPTRVLLDSGATHSFVSSMFLTKINRMLEPLPEELVICTPVGDVLLVSEVLCDCEVVVEG 701

Query: 301 LCMLVDLLPLELQAFDVILGMDFLFTHYSSMDCHRTEVTFRKPD---------------- 326
           L M VDLLPLELQ  DVILGMDFLFTHY+SM+CHR EVTF+KP                 
Sbjct: 702 LYMSVDLLPLELQTLDVILGMDFLFTHYASMNCHRKEVTFKKPGSTEVIFKGERNIIPTS 761

[Close]

BLAST of Lcy09g008640 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 443.0 bits (1138), Expect = 2.3e-120
Identity = 263/433 (60.74%), Postives = 284/433 (65.59%), Query Frame = 0


Query: 1   MASESDRCRRFERGLRFEIRTPVTTIAKWTDFSQLVEIALRVEQSIIEEKSTLEPSRGVS 60
           +ASESDRC RFERGLRFEIRTPVT IAKW +FSQLVE ALRV+QSI+EEKS +E SRGVS
Sbjct: 402 VASESDRCHRFERGLRFEIRTPVTAIAKWMNFSQLVETALRVKQSIVEEKSAMELSRGVS 461

Query: 61  TATGFRGREQRRFTPGVNVSGHQDFKRRSGGQSSRQMSSGSAYQRSPLLVNS-------- 120
           T +G RGREQRRFTPGVNVSG QDFKRRSGG+  RQMSSGSAYQR     +S        
Sbjct: 462 TTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAYQRQSRRASSQPANSVAR 521

Query: 121 ---GEPHVQVVAR---------------IIG-------------------LRAAVQRDQG 180
              G+  V   ++               +IG                   LR  V+RDQG
Sbjct: 522 SRTGQESVASESKRTPCVSCGKSHQGRCVIGAGVCYQCGKTGHFKRDCPQLRVVVRRDQG 581

Query: 181 VESHTVEQSRVSAAAGEGTSGARQKGVVGRPRQQVKVYAMTQQEAEDAPDVITSTILICN 240
           VESHTVEQSR+S AAGE TSGARQKGVVGRPRQQ KVYAMTQQEAEDAPDVIT TILICN
Sbjct: 582 VESHTVEQSRISTAAGEETSGARQKGVVGRPRQQGKVYAMTQQEAEDAPDVITETILICN 641

Query: 241 VPARVLLDPGATHSFVSSMFLTKLNRMLEPLSEELVIYTPVGDILLVNEVLRDCEVVVEG 300
           VP RVLLD GATHSFVSSMFLTK+NRMLEPL EELVI TPVGD+LLV+EVL DCEVVVEG
Sbjct: 642 VPTRVLLDSGATHSFVSSMFLTKINRMLEPLPEELVICTPVGDVLLVSEVLCDCEVVVEG 701

Query: 301 LCMLVDLLPLELQAFDVILGMDFLFTHYSSMDCHRTEVTFRKPD---------------- 326
           L M VDLLPLELQ  DVILGMDFLFTHY+SM+CHR EVTF+KP                 
Sbjct: 702 LYMSVDLLPLELQTLDVILGMDFLFTHYASMNCHRKEVTFKKPGSTEVIFKGERNIIPTS 761

The following BLAST results are available for this feature:

BLAST of Lcy09g008640 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g008640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UJV1	6.0e-130	68.10	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CCC7	6.0e-130	68.10	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SZ16	4.2e-123	62.65	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40...	[more]
A0A5D3BTP3	1.1e-120	60.74	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5A7T7M6	1.1e-120	60.74	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]

BLAST of Lcy09g008640 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK08952.1	1.2e-129	68.10	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0055470.1	1.2e-129	68.10	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035808.1	8.6e-123	62.65	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0037581.1	2.3e-120	60.74	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK03091.1	2.3e-120	60.74	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Lcy09g008640 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF08284	RVP_2	coord: 169..299 e-value: 4.0E-37 score: 127.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..107
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 189..296
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 189..296
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 190..279 e-value: 3.0306E-19 score: 79.3027
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 167..304 e-value: 9.3E-17 score: 63.0
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 182..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g008640.1	Lcy09g008640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0005488	binding
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0008233	peptidase activity