Lcy09g008450 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g008450
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr09: 7723620 .. 7726738 (+)
RNA-Seq ExpressionLcy09g008450
SyntenyLcy09g008450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTCTACCATCTGCCTGAACCGTTCGTCGTCCGCCATCATCTACTTGCCTCAGCCCATCGCCGGCATTCGTCCCCTGAGGCAGTCCATTGACCGTCGCTGTCCCTGGTTCGCCTCTGCCCATCGCCACCAGATTTCCCCTTTCTTCGATTACTAGGGTTATGGACGCCCTTCTCCCCAGGTATATTGCACTACTCCATTACCTCCATTAATTGGCGTTCATTTTTCTCCACTGAGTTTCAATTTAAGGTGTGGAAAAGACCTAAACTTAGTTTTGAAGCTACCAAGGTGAGTGTGATAGACAAATAATTGGTTCTCTGTTCTTATATTATTCGACTTTATAATACTTTGTATAATAAGCTTATGTTTTTATAGTTGGATTTAGTATTCCCGTGCCTGCGAATCACTTTTGGTACTTTTTACATTGTTTTGGTTGTTTCATCTTAATCTAAGAGCAATAATACTTTGTTGATAGTTAAAAAAGCTTATATGAAAAGAATTTATATTTGAAGTTCTTTAATAGATGTTAACGAAGTAACTAAAAGTTTCTTAGCAAGCATTGAGGAGAAAAGTATTGGTAAGATTCTTGTACTCATTTGCATTTTTTCTTCTCTTTAAGTGAACCTATTTAGCTGAAGTTTAGATATTACTGAGAGATTCAAAAGAAATAATCTGCTTCTTTAGACAACAGGAGGGTACAGAAAGTATATTTATTTTCCTTTTCACCTCTAGGATCTTCAATAATATTCATTTTTTTTTAAAAAAAATTCTATTGCATTGGATTTCTTTTTTCTCAGTCTTTAACACTTTGTTACCCCTCCATGACCGTTGTTGGACGATTGTTAAACGCCATGAGAAGTGGAGATGTCGTTGTTGCCTCCACATCTCAACTGTTTTTCAAAACTATCAACAGTCACTTGGTGGAACTCCAACATAAGAGATGCTGTAAATCAAGGCCATGCGTTCAAAGCCCTCGTCCTTCTCCGCCAAATGAAGCTAAATGGTCTGCAACCCAACAATTTTACATTCCCCTTCTTAGCAAAAGCTTGCGCCAAGCTCTCCCATCTTACTAACTCCCAAATTATCCATGCCCATGTCATCAAATCCCCGTTCCAGTCTGATATCTTTGTTCAGACGGCCATGGTCGATATGTATGTCAAGTGTTGTAAAGTGGAGGATGCATATAACTTGTTTGATAAAATGCCTGTTAGGGATATTGCATCATGGAACGCTATGATTATTGGCTTCTCTCAAATTGGCTCACTTGATAGAGTTTTCAGTTTGTTTGTGGGGATGAGATTAGTGGGAATTCACCCAGATGCAGCTACTGTCATTGGATTGACTCGAGCAGTTTTATCGGTGAAAAGTTTAAGATTTTTGAAAGCTGTTCATGCTGTTGGGATTGAAACAGGATTAGATGCTGACGTCTCAGTTGCTAACACTTGGATTGCTGCTTATTCCAAATGCGGTGAACTGCAGCTGGCAAAGATGGTGTTCCATGGGATTCAAAAGCATGTAAGATCTCCTGTCTCGTGGAATTCATTAATTGCATGCTATGCAAACTTTGGGAAATATGTAGACGCTGTAAATGCATACAAAGGATTGCTCTGTGATGGGTTTAAGCCTGATGCAAGTACAATTATTAGCTTGCTTTCTTCTTGCATGCAACCTGAAGCACTAATTTATGGTTCCCTTATTCATGGTCATGGTTTCCAATTGGGTTGTGATTCTGATATTTCTTTAATTAACACCCTTATATCAATGTATTCAAGGTGTGGAGATATTAGCTCTGCTAAAATTTTATTTGATGGTATGTCTATTAGAACTTGTGTTTCATGGACTGCCATGATTAGTGGGTACAGTGAGGTGGGGCGAATCGACGACGCCTTAGTATTATTTAATGCCATGGAGGAAGCTGGTGAAAAACCTGATGTAGTTACCGTTCTTTCCCTGATATCAGGTTGCGGTAAAACAGGGGCACTTGAGCTGGGACATTGGATTGATAACTATTCATCTTTATATGGATTGAAAAAAGACGTGGTAGTTTGTAATGCATTAATAGACATGTATGCAAAATGTGGTAGTTTGAGTGATGCTCGAGAGGTATTCGACAGTTTGTCTAATAAAACTGTTGTCTCTTGGACAGCCATGATTGCAGCTTGTGCTCTAAATGGGGAATTTAGAGAAGCTTTAGATCTCTTCTATCTAATGTCAGACTCGGGAATAAAGCCAAACCATATCACGTTTCTAGCCGTTCTTCAAGCTTGCACTCATGGTGGATACCTCGAGAAAGGGAGGGAATGCTTTGTGATGATGACTAAAAGATATGGTATAAATCCTAGTTTGGATCATTATTCGTGCATGATCGATCTTCTTGGACGGAAAGGGAAGCTAATTGAAGCCTTGGAGGTGATTCAAGACATGCCTATGAAACCTGATGAGGGCATATGGGGTGCATTGCTTGGTGCTTGTAAGATTCACAACAACATGCAAATCGGTGAGTATGTCTCTCATCATCTCTTTGAATTGCAGCCACAGGTTGCAGTTTCATTTGTGGAGATGGCTAATATATATGCATCTGTTGGAAGATGGGATAGAGTTGCAGCTATGAGGAAAACGATGAGATCAAACAAAGTGAGGAAATCTCCTGGGAAAAGCATTGTTCAAGTCAATGGAAAGTCGCATGTGTTTTTTGTTGAGGACAGAAGCCATCATGACAGCTTGCTGATTTATTCTGTGTTGGAGAATTTAATAATGCAGATGAAACAAAAAGATCCCTCGTCAAATGGCCAGAGAATAATTGTTGAATATGATATGGAATGAAGCTGAGTTGTCCCAATAATCTTCACCTATCAGAAGAGAGTGCGATCTTTATCAAAGTTGTCCTGGTAATTTTTATATACCACAAGATTCTTTTAACTTATGAAATAGGGAAAATTACAATTGCAAAAGGTTTCATAAACTTCAGTCTTTAGTACTTTCTTGGCTGGTCATCATGTGACTCGTTTAGATATGTATTCACATTGATATGTAGAAATCAGTTGAAATCAATGTGACTAAAAATCTGCTGAAACTGTATGAAATGATAGAGTTAATAGATGAAGTTCATATGTCGTAGGA

mRNA sequence

GTGTCTACCATCTGCCTGAACCGTTCGTCGTCCGCCATCATCTACTTGCCTCAGCCCATCGCCGGCATTCGTCCCCTGAGGCAGTCCATTGACCGTCGCTGTCCCTGGTTCGCCTCTGCCCATCGCCACCAGATTTCCCCTTTCTTCGATTACTAGGGTTATGGACGCCCTTCTCCCCAGTGGAGATGTCGTTGTTGCCTCCACATCTCAACTGTTTTTCAAAACTATCAACAGTCACTTGGTGGAACTCCAACATAAGAGATGCTGTAAATCAAGGCCATGCGTTCAAAGCCCTCGTCCTTCTCCGCCAAATGAAGCTAAATGGTCTGCAACCCAACAATTTTACATTCCCCTTCTTAGCAAAAGCTTGCGCCAAGCTCTCCCATCTTACTAACTCCCAAATTATCCATGCCCATGTCATCAAATCCCCGTTCCAGTCTGATATCTTTGTTCAGACGGCCATGGTCGATATGTATGTCAAGTGTTGTAAAGTGGAGGATGCATATAACTTGTTTGATAAAATGCCTGTTAGGGATATTGCATCATGGAACGCTATGATTATTGGCTTCTCTCAAATTGGCTCACTTGATAGAGTTTTCAGTTTGTTTGTGGGGATGAGATTAGTGGGAATTCACCCAGATGCAGCTACTGTCATTGGATTGACTCGAGCAGTTTTATCGGTGAAAAGTTTAAGATTTTTGAAAGCTGTTCATGCTGTTGGGATTGAAACAGGATTAGATGCTGACGTCTCAGTTGCTAACACTTGGATTGCTGCTTATTCCAAATGCGGTGAACTGCAGCTGGCAAAGATGGTGTTCCATGGGATTCAAAAGCATGTAAGATCTCCTGTCTCGTGGAATTCATTAATTGCATGCTATGCAAACTTTGGGAAATATGTAGACGCTGTAAATGCATACAAAGGATTGCTCTGTGATGGGTTTAAGCCTGATGCAAGTACAATTATTAGCTTGCTTTCTTCTTGCATGCAACCTGAAGCACTAATTTATGGTTCCCTTATTCATGGTCATGGTTTCCAATTGGGTTGTGATTCTGATATTTCTTTAATTAACACCCTTATATCAATGTATTCAAGGTGTGGAGATATTAGCTCTGCTAAAATTTTATTTGATGGTATGTCTATTAGAACTTGTGTTTCATGGACTGCCATGATTAGTGGGTACAGTGAGGTGGGGCGAATCGACGACGCCTTAGTATTATTTAATGCCATGGAGGAAGCTGGTGAAAAACCTGATGTAGTTACCGTTCTTTCCCTGATATCAGGTTGCGGTAAAACAGGGGCACTTGAGCTGGGACATTGGATTGATAACTATTCATCTTTATATGGATTGAAAAAAGACGTGGTAGTTTGTAATGCATTAATAGACATGTATGCAAAATGTGGTAGTTTGAGTGATGCTCGAGAGGTATTCGACAGTTTGTCTAATAAAACTGTTGTCTCTTGGACAGCCATGATTGCAGCTTGTGCTCTAAATGGGGAATTTAGAGAAGCTTTAGATCTCTTCTATCTAATGTCAGACTCGGGAATAAAGCCAAACCATATCACGTTTCTAGCCGTTCTTCAAGCTTGCACTCATGGTGGATACCTCGAGAAAGGGAGGGAATGCTTTGTGATGATGACTAAAAGATATGGTATAAATCCTAGTTTGGATCATTATTCGTGCATGATCGATCTTCTTGGACGGAAAGGGAAGCTAATTGAAGCCTTGGAGGTGATTCAAGACATGCCTATGAAACCTGATGAGGGCATATGGGGTGCATTGCTTGGTGCTTGTAAGATTCACAACAACATGCAAATCGGTGAGTATGTCTCTCATCATCTCTTTGAATTGCAGCCACAGGTTGCAGTTTCATTTGTGGAGATGGCTAATATATATGCATCTGTTGGAAGATGGGATAGAGTTGCAGCTATGAGGAAAACGATGAGATCAAACAAAGTGAGGAAATCTCCTGGGAAAAGCATTGTTCAAGTCAATGGAAAGTCGCATGTGTTTTTTGTTGAGGACAGAAGCCATCATGACAGCTTGCTGATTTATTCTGTGTTGGAGAATTTAATAATGCAGATGAAACAAAAAGATCCCTCGTCAAATGGCCAGAGAATAATTGTTGAATATGATATGGAATGAAGCTGAGTTGTCCCAATAATCTTCACCTATCAGAAGAGAGTGCGATCTTTATCAAAGTTGTCCTGGTAATTTTTATATACCACAAGATTCTTTTAACTTATGAAATAGGGAAAATTACAATTGCAAAAGGTTTCATAAACTTCAGTCTTTAGTACTTTCTTGGCTGGTCATCATGTGACTCGTTTAGATATGTATTCACATTGATATGTAGAAATCAGTTGAAATCAATGTGACTAAAAATCTGCTGAAACTGTATGAAATGATAGAGTTAATAGATGAAGTTCATATGTCGTAGGA

Coding sequence (CDS)

ATGTCGTTGTTGCCTCCACATCTCAACTGTTTTTCAAAACTATCAACAGTCACTTGGTGGAACTCCAACATAAGAGATGCTGTAAATCAAGGCCATGCGTTCAAAGCCCTCGTCCTTCTCCGCCAAATGAAGCTAAATGGTCTGCAACCCAACAATTTTACATTCCCCTTCTTAGCAAAAGCTTGCGCCAAGCTCTCCCATCTTACTAACTCCCAAATTATCCATGCCCATGTCATCAAATCCCCGTTCCAGTCTGATATCTTTGTTCAGACGGCCATGGTCGATATGTATGTCAAGTGTTGTAAAGTGGAGGATGCATATAACTTGTTTGATAAAATGCCTGTTAGGGATATTGCATCATGGAACGCTATGATTATTGGCTTCTCTCAAATTGGCTCACTTGATAGAGTTTTCAGTTTGTTTGTGGGGATGAGATTAGTGGGAATTCACCCAGATGCAGCTACTGTCATTGGATTGACTCGAGCAGTTTTATCGGTGAAAAGTTTAAGATTTTTGAAAGCTGTTCATGCTGTTGGGATTGAAACAGGATTAGATGCTGACGTCTCAGTTGCTAACACTTGGATTGCTGCTTATTCCAAATGCGGTGAACTGCAGCTGGCAAAGATGGTGTTCCATGGGATTCAAAAGCATGTAAGATCTCCTGTCTCGTGGAATTCATTAATTGCATGCTATGCAAACTTTGGGAAATATGTAGACGCTGTAAATGCATACAAAGGATTGCTCTGTGATGGGTTTAAGCCTGATGCAAGTACAATTATTAGCTTGCTTTCTTCTTGCATGCAACCTGAAGCACTAATTTATGGTTCCCTTATTCATGGTCATGGTTTCCAATTGGGTTGTGATTCTGATATTTCTTTAATTAACACCCTTATATCAATGTATTCAAGGTGTGGAGATATTAGCTCTGCTAAAATTTTATTTGATGGTATGTCTATTAGAACTTGTGTTTCATGGACTGCCATGATTAGTGGGTACAGTGAGGTGGGGCGAATCGACGACGCCTTAGTATTATTTAATGCCATGGAGGAAGCTGGTGAAAAACCTGATGTAGTTACCGTTCTTTCCCTGATATCAGGTTGCGGTAAAACAGGGGCACTTGAGCTGGGACATTGGATTGATAACTATTCATCTTTATATGGATTGAAAAAAGACGTGGTAGTTTGTAATGCATTAATAGACATGTATGCAAAATGTGGTAGTTTGAGTGATGCTCGAGAGGTATTCGACAGTTTGTCTAATAAAACTGTTGTCTCTTGGACAGCCATGATTGCAGCTTGTGCTCTAAATGGGGAATTTAGAGAAGCTTTAGATCTCTTCTATCTAATGTCAGACTCGGGAATAAAGCCAAACCATATCACGTTTCTAGCCGTTCTTCAAGCTTGCACTCATGGTGGATACCTCGAGAAAGGGAGGGAATGCTTTGTGATGATGACTAAAAGATATGGTATAAATCCTAGTTTGGATCATTATTCGTGCATGATCGATCTTCTTGGACGGAAAGGGAAGCTAATTGAAGCCTTGGAGGTGATTCAAGACATGCCTATGAAACCTGATGAGGGCATATGGGGTGCATTGCTTGGTGCTTGTAAGATTCACAACAACATGCAAATCGGTGAGTATGTCTCTCATCATCTCTTTGAATTGCAGCCACAGGTTGCAGTTTCATTTGTGGAGATGGCTAATATATATGCATCTGTTGGAAGATGGGATAGAGTTGCAGCTATGAGGAAAACGATGAGATCAAACAAAGTGAGGAAATCTCCTGGGAAAAGCATTGTTCAAGTCAATGGAAAGTCGCATGTGTTTTTTGTTGAGGACAGAAGCCATCATGACAGCTTGCTGATTTATTCTGTGTTGGAGAATTTAATAATGCAGATGAAACAAAAAGATCCCTCGTCAAATGGCCAGAGAATAATTGTTGAATATGATATGGAATGA

Protein sequence

MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAKACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIASWNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGIETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDAVNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTVLSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSNKTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGRECFVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIVQVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQKDPSSNGQRIIVEYDME
Homology
[Close]
BLAST of Lcy09g008450 vs. ExPASy Swiss-Prot
Match: P0C8Q2 (Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E1 PE=2 SV=1)

HSP 1 Score: 718.8 bits (1854), Expect = 5.7e-206
Identity = 355/637 (55.73%), Postives = 454/637 (71.27%), Query Frame = 0 

Query: 1   MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAK 60
           MSL+   L   S LS+V  WN  IR+AVN+    ++L+L R+MK  G +PNNFTFPF+AK
Sbjct: 1   MSLIHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAK 60

Query: 61  ACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIAS 120
           ACA+L+ +   +++HAH+IKSPF SD+FV TA VDM+VKC  V+ A  +F++MP RD  +
Sbjct: 61  ACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATT 120

Query: 121 WNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGI 180
           WNAM+ GF Q G  D+ FSLF  MRL  I PD+ TV+ L ++    KSL+ L+A+HAVGI
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI 180

Query: 181 ETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDA 240
             G+D  V+VANTWI+ Y KCG+L  AK+VF  I +  R+ VSWNS+   Y+ FG+  DA
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDA 240

Query: 241 VNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
              Y  +L + FKPD ST I+L +SC  PE L  G LIH H   LG D DI  INT ISM
Sbjct: 241 FGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 300

Query: 301 YSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTV 360
           YS+  D  SA++LFD M+ RTCVSWT MISGY+E G +D+AL LF+AM ++GEKPD+VT+
Sbjct: 301 YSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL 360

Query: 361 LSLISGCGKTGALELGHWIDNYSSLYGLKKD-VVVCNALIDMYAKCGSLSDAREVFDSLS 420
           LSLISGCGK G+LE G WID  + +YG K+D V++CNALIDMY+KCGS+ +AR++FD+  
Sbjct: 361 LSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420

Query: 421 NKTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGRE 480
            KTVV+WT MIA  ALNG F EAL LF  M D   KPNHITFLAVLQAC H G LEKG E
Sbjct: 421 EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 480

Query: 481 CFVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIH 540
            F +M + Y I+P LDHYSCM+DLLGRKGKL EALE+I++M  KPD GIWGALL ACKIH
Sbjct: 481 YFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH 540

Query: 541 NNMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSI 600
            N++I E  +  LF L+PQ+A  +VEMANIYA+ G WD  A +R  M+   ++K PG+S+
Sbjct: 541 RNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESV 600

Query: 601 VQVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQK 637
           +QVNGK+H F V +  H ++ +IY  L  L +  K K
Sbjct: 601 IQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKDK 637

[Close]
BLAST of Lcy09g008450 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 5.6e-121
Identity = 222/601 (36.94%), Postives = 344/601 (57.24%), Query Frame = 0 

Query: 35  KALVLLRQMKLNGLQPNNFTFPFLAKACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMV 94
           KAL    +M+ + ++P  + F +L K C   + L   + IH  ++KS F  D+F  T + 
Sbjct: 118 KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177

Query: 95  DMYVKCCKVEDAYNLFDKMPVRDIASWNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAA 154
           +MY KC +V +A  +FD+MP RD+ SWN ++ G+SQ G       +   M    + P   
Sbjct: 178 NMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237

Query: 155 TVIGLTRAVLSVKSLRFLKAVHAVGIETGLDADVSVANTWIAAYSKCGELQLAKMVFHGI 214
           T++ +  AV +++ +   K +H   + +G D+ V+++   +  Y+KCG L+ A+ +F G+
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297

Query: 215 QKHVRSPVSWNSLIACYANFGKYVDAVNAYKGLLCDGFKPDASTIISLLSSCMQPEALIY 274
            +  R+ VSWNS+I  Y       +A+  ++ +L +G KP   +++  L +C     L  
Sbjct: 298 LE--RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 357

Query: 275 GSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSAKILFDGMSIRTCVSWTAMISGYSE 334
           G  IH    +LG D ++S++N+LISMY +C ++ +A  +F  +  RT VSW AMI G+++
Sbjct: 358 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ 417

Query: 335 VGRIDDALVLFNAMEEAGEKPDVVTVLSLISGCGKTGALELGHWIDNYSSLYGLKKDVVV 394
            GR  DAL  F+ M     KPD  T +S+I+   +        WI        L K+V V
Sbjct: 418 NGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFV 477

Query: 395 CNALIDMYAKCGSLSDAREVFDSLSNKTVVSWTAMIAACALNGEFREALDLFYLMSDSGI 454
             AL+DMYAKCG++  AR +FD +S + V +W AMI     +G  + AL+LF  M    I
Sbjct: 478 TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTI 537

Query: 455 KPNHITFLAVLQACTHGGYLEKGRECFVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEAL 514
           KPN +TFL+V+ AC+H G +E G +CF MM + Y I  S+DHY  M+DLLGR G+L EA 
Sbjct: 538 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 597

Query: 515 EVIQDMPMKPDEGIWGALLGACKIHNNMQIGEYVSHHLFELQPQVAVSFVEMANIYASVG 574
           + I  MP+KP   ++GA+LGAC+IH N+   E  +  LFEL P      V +ANIY +  
Sbjct: 598 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAAS 657

Query: 575 RWDRVAAMRKTMRSNKVRKSPGKSIVQVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMK 634
            W++V  +R +M    +RK+PG S+V++  + H FF    +H DS  IY+ LE LI  +K
Sbjct: 658 MWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 716

Query: 635 Q 636
           +
Sbjct: 718 E 716

[Close]
BLAST of Lcy09g008450 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 5.8e-110
Identity = 210/647 (32.46%), Postives = 358/647 (55.33%), Query Frame = 0 

Query: 16  TVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAKACAKLSHLTNSQIIH 75
           T   +NS IR   + G   +A++L  +M  +G+ P+ +TFPF   ACAK     N   IH
Sbjct: 98  TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157

Query: 76  AHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIASWNAMIIGFSQIGSLD 135
             ++K  +  D+FVQ ++V  Y +C +++ A  +FD+M  R++ SW +MI G+++     
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217

Query: 136 RVFSLFVGM-RLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGIETGLDADVSVANTW 195
               LF  M R   + P++ T++ +  A   ++ L   + V+A    +G++ +  + +  
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277

Query: 196 IAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDAVNAYKGLLCDGFKP 255
           +  Y KC  + +AK +F   +    +    N++ + Y   G   +A+  +  ++  G +P
Sbjct: 278 VDMYMKCNAIDVAKRLFD--EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 337

Query: 256 DASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSAKILF 315
           D  +++S +SSC Q   +++G   HG+  + G +S  ++ N LI MY +C    +A  +F
Sbjct: 338 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 397

Query: 316 DGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEE------------------------ 375
           D MS +T V+W ++++GY E G +D A   F  M E                        
Sbjct: 398 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 457

Query: 376 --------AGEKPDVVTVLSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMY 435
                    G   D VT++S+ S CG  GAL+L  WI  Y    G++ DV +   L+DM+
Sbjct: 458 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 517

Query: 436 AKCGSLSDAREVFDSLSNKTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFL 495
           ++CG    A  +F+SL+N+ V +WTA I A A+ G    A++LF  M + G+KP+ + F+
Sbjct: 518 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 577

Query: 496 AVLQACTHGGYLEKGRECFVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPM 555
             L AC+HGG +++G+E F  M K +G++P   HY CM+DLLGR G L EA+++I+DMPM
Sbjct: 578 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 637

Query: 556 KPDEGIWGALLGACKIHNNMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAM 615
           +P++ IW +LL AC++  N+++  Y +  +  L P+   S+V ++N+YAS GRW+ +A +
Sbjct: 638 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 697

Query: 616 RKTMRSNKVRKSPGKSIVQVNGKSHVFFVEDRSHHDSLLIYSVLENL 630
           R +M+   +RK PG S +Q+ GK+H F   D SH +   I ++L+ +
Sbjct: 698 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEV 742

[Close]
BLAST of Lcy09g008450 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 7.6e-110
Identity = 208/622 (33.44%), Postives = 358/622 (57.56%), Query Frame = 0 

Query: 13  KLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAKACAKLSHLTNSQ 72
           K+    +WN  + +    G    ++ L ++M  +G++ +++TF  ++K+ + L  +   +
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215

Query: 73  IIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIASWNAMIIGFSQIG 132
            +H  ++KS F     V  ++V  Y+K  +V+ A  +FD+M  RD+ SWN++I G+   G
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275

Query: 133 SLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGIETGLDADVSVAN 192
             ++  S+FV M + GI  D AT++ +       + +   +AVH++G++     +    N
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335

Query: 193 TWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDAVNAYKGLLCDGF 252
           T +  YSKCG+L  AK VF  +    RS VS+ S+IA YA  G   +AV  ++ +  +G 
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSD--RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 395

Query: 253 KPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSAKI 312
            PD  T+ ++L+ C +   L  G  +H    +     DI + N L+ MY++CG +  A++
Sbjct: 396 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 455

Query: 313 LFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFN-AMEEAGEKPDVVTVLSLISGCGKTG 372
           +F  M ++  +SW  +I GYS+    ++AL LFN  +EE    PD  TV  ++  C    
Sbjct: 456 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 515

Query: 373 ALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSNKTVVSWTAMIA 432
           A + G  I  Y    G   D  V N+L+DMYAKCG+L  A  +FD +++K +VSWT MIA
Sbjct: 516 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 575

Query: 433 ACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGRECFVMMTKRYGIN 492
              ++G  +EA+ LF  M  +GI+ + I+F+++L AC+H G +++G   F +M     I 
Sbjct: 576 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 635

Query: 493 PSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMQIGEYVSHH 552
           P+++HY+C++D+L R G LI+A   I++MP+ PD  IWGALL  C+IH+++++ E V+  
Sbjct: 636 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 695

Query: 553 LFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIVQVNGKSHVFFV 612
           +FEL+P+    +V MANIYA   +W++V  +RK +    +RK+PG S +++ G+ ++F  
Sbjct: 696 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVA 755

Query: 613 EDRSHHDSLLIYSVLENLIMQM 634
            D S+ ++  I + L  +  +M
Sbjct: 756 GDSSNPETENIEAFLRKVRARM 775

[Close]
BLAST of Lcy09g008450 vs. ExPASy Swiss-Prot
Match: Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.4e-108
Identity = 228/621 (36.71%), Postives = 344/621 (55.39%), Query Frame = 0 

Query: 19   WWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAKACAKLSHLTNSQIIHAHV 78
            +WN+ IR   + G + K + L   MK +G   ++FTF  L   CA    L      H+ +
Sbjct: 395  FWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSII 454

Query: 79   IKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIASWNAMIIGFSQIGSLDRVF 138
            IK     ++FV  A+VDMY KC  +EDA  +F++M  RD  +WN +I  + Q  +    F
Sbjct: 455  IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAF 514

Query: 139  SLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGIETGLDADVSVANTWIAAY 198
             LF  M L GI  D A +    +A   V  L   K VH + ++ GLD D+   ++ I  Y
Sbjct: 515  DLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMY 574

Query: 199  SKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDAVNAYKGLLCDGFKPDAST 258
            SKCG ++ A+ VF  + +   S VS N+LIA Y+      +AV  ++ +L  G  P   T
Sbjct: 575  SKCGIIKDARKVFSSLPEW--SVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEIT 634

Query: 259  IISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLIN-TLISMYSRCGDISSAKILFDGM 318
              +++ +C +PE+L  G+  HG   + G  S+   +  +L+ MY     ++ A  LF  +
Sbjct: 635  FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL 694

Query: 319  SI-RTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTVLSLISGCGKTGALELG 378
            S  ++ V WT M+SG+S+ G  ++AL  +  M   G  PD  T ++++  C    +L  G
Sbjct: 695  SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 754

Query: 379  HWIDNYSSLYGLKKDV--VVCNALIDMYAKCGSLSDAREVFDSLSNKT-VVSWTAMIAAC 438
              I  +S ++ L  D+  +  N LIDMYAKCG +  + +VFD +  ++ VVSW ++I   
Sbjct: 755  RAI--HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGY 814

Query: 439  ALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGRECFVMMTKRYGINPS 498
            A NG   +AL +F  M  S I P+ ITFL VL AC+H G +  GR+ F MM  +YGI   
Sbjct: 815  AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEAR 874

Query: 499  LDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMQIGEYVSHHLF 558
            +DH +CM+DLLGR G L EA + I+   +KPD  +W +LLGAC+IH +   GE  +  L 
Sbjct: 875  VDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLI 934

Query: 559  ELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIVQVNGKSHVFFVED 618
            EL+PQ + ++V ++NIYAS G W++  A+RK MR   V+K PG S + V  ++H+F   D
Sbjct: 935  ELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGD 994

Query: 619  RSHHDSLLIYSVLENLIMQMK 635
            +SH +   I   LE+L   MK
Sbjct: 995  KSHSEIGKIEMFLEDLYDLMK 1010

[Close]
BLAST of Lcy09g008450 vs. ExPASy TrEMBL
Match: A0A0A0KK94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501860 PE=4 SV=1)

HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 568/644 (88.20%), Postives = 605/644 (93.94%), Query Frame = 0 

Query: 1   MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAK 60
           MS L  HLNCFSKLST+TWWNS+IR AVNQG+A KAL L  Q+KLNGLQPNNFTFPFL+K
Sbjct: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60

Query: 61  ACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIH HV+KSPF SDI+VQTAMVDMYVKC KV+DAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGI 180
           WNAMIIGFSQIGSLDRVF+LF+GMRLVG  PDAATVIGLTRAV+S KSLRFLKAVHA+GI
Sbjct: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDA 240
           ETGLDAD SV+NTWIAAYSKCGELQLAKMVFHGIQK  RS VSWNSLIACYA+FGKYVDA
Sbjct: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240

Query: 241 VNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           V +YKGLLCDGFKPDASTIISLLSSC QPEALIYG LIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTV 360
           YSRCGDISSA ILFDGMSIRTCVSWTAMISGYSEVGR+DDALVLFNAMEE GEKPD+VTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSN 420
           LSLISGCGKTGAL LGHWIDNY+SL+ LKKDVVVCNALIDMYAKCGSL+DARE+F SL N
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S+SGI+PN+ITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540
           F+MMT+RYGINP LDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIV 600
           NM+IGEYVS +LFELQP+VAVSFVEMANIYASVGRWD VAAMRKTMRSN++RKSPGKS+V
Sbjct: 541 NMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQKDPSSNGQR 645
           QVNG SHVFFVEDRSHHDSLLIY  L NL MQMKQK+ SS+ QR
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQR 644

[Close]
BLAST of Lcy09g008450 vs. ExPASy TrEMBL
Match: A0A5D3CMI9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002380 PE=4 SV=1)

HSP 1 Score: 1159.4 bits (2998), Expect = 0.0e+00
Identity = 568/646 (87.93%), Postives = 603/646 (93.34%), Query Frame = 0 

Query: 1   MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAK 60
           M  L PHLN FSKLST+TWWNS+IR AVNQG+A KAL L  Q+KLNGLQPNNFTFPFLAK
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIH HV+KSPF SDI+VQTAMVDMYVKC K EDAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGI 180
           WNAMI+GFSQIGSLDRVF+LF+GMRLVG  PDAATVIGLTRAVLS KSLRFLKAVHA+GI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDA 240
           ETGLDAD SV+NTWI+AYSKCGELQLAKMVFHGIQK+ RS VSWNSLIACYA+FGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN+YKGLLCDGFKPDA TIISLL SC QPEALIYGSLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTV 360
           YSRCGDISSA ILFDGMSIRTCVSWTAMISGYSEVGR+DDALVLFNAMEE GEKPD+VTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSN 420
           LSLISGCGKTGAL LGHWIDNY+SL+GLKKDVVVCNALIDMYAKCGSL+DAREVF SL N
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S+SGI+PN+ITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540
           F+MMT+RYGINP LDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIV 600
           NM+IGEYVS HLFELQP+VA SFVEMANIYA VGRWD VAAMRK MRSN++RKSPGKS+V
Sbjct: 541 NMEIGEYVSRHLFELQPRVAASFVEMANIYALVGRWDEVAAMRKRMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQKDPSSNGQRII 647
           QVNG SHVFFVEDRSHHDSLLIY  L NL MQMKQK+ SS+ QRII
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRII 646

[Close]
BLAST of Lcy09g008450 vs. ExPASy TrEMBL
Match: A0A1S3B2E4 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485014 PE=4 SV=1)

HSP 1 Score: 1159.4 bits (2998), Expect = 0.0e+00
Identity = 568/646 (87.93%), Postives = 603/646 (93.34%), Query Frame = 0 

Query: 1   MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAK 60
           M  L PHLN FSKLST+TWWNS+IR AVNQG+A KAL L  Q+KLNGLQPNNFTFPFLAK
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIH HV+KSPF SDI+VQTAMVDMYVKC K EDAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGI 180
           WNAMI+GFSQIGSLDRVF+LF+GMRLVG  PDAATVIGLTRAVLS KSLRFLKAVHA+GI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDA 240
           ETGLDAD SV+NTWI+AYSKCGELQLAKMVFHGIQK+ RS VSWNSLIACYA+FGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN+YKGLLCDGFKPDA TIISLL SC QPEALIYGSLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTV 360
           YSRCGDISSA ILFDGMSIRTCVSWTAMISGYSEVGR+DDALVLFNAMEE GEKPD+VTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSN 420
           LSLISGCGKTGAL LGHWIDNY+SL+GLKKDVVVCNALIDMYAKCGSL+DAREVF SL N
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S+SGI+PN+ITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540
           F+MMT+RYGINP LDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIV 600
           NM+IGEYVS HLFELQP+VA SFVEMANIYA VGRWD VAAMRK MRSN++RKSPGKS+V
Sbjct: 541 NMEIGEYVSRHLFELQPRVAASFVEMANIYALVGRWDEVAAMRKRMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQKDPSSNGQRII 647
           QVNG SHVFFVEDRSHHDSLLIY  L NL MQMKQK+ SS+ QRII
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRII 646

[Close]
BLAST of Lcy09g008450 vs. ExPASy TrEMBL
Match: A0A1S3B296 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485014 PE=4 SV=1)

HSP 1 Score: 1159.4 bits (2998), Expect = 0.0e+00
Identity = 568/646 (87.93%), Postives = 603/646 (93.34%), Query Frame = 0 

Query: 1   MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAK 60
           M  L PHLN FSKLST+TWWNS+IR AVNQG+A KAL L  Q+KLNGLQPNNFTFPFLAK
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIH HV+KSPF SDI+VQTAMVDMYVKC K EDAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGI 180
           WNAMI+GFSQIGSLDRVF+LF+GMRLVG  PDAATVIGLTRAVLS KSLRFLKAVHA+GI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDA 240
           ETGLDAD SV+NTWI+AYSKCGELQLAKMVFHGIQK+ RS VSWNSLIACYA+FGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN+YKGLLCDGFKPDA TIISLL SC QPEALIYGSLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTV 360
           YSRCGDISSA ILFDGMSIRTCVSWTAMISGYSEVGR+DDALVLFNAMEE GEKPD+VTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSN 420
           LSLISGCGKTGAL LGHWIDNY+SL+GLKKDVVVCNALIDMYAKCGSL+DAREVF SL N
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S+SGI+PN+ITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540
           F+MMT+RYGINP LDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIV 600
           NM+IGEYVS HLFELQP+VA SFVEMANIYA VGRWD VAAMRK MRSN++RKSPGKS+V
Sbjct: 541 NMEIGEYVSRHLFELQPRVAASFVEMANIYALVGRWDEVAAMRKRMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQKDPSSNGQRII 647
           QVNG SHVFFVEDRSHHDSLLIY  L NL MQMKQK+ SS+ QRII
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRII 646

[Close]
BLAST of Lcy09g008450 vs. ExPASy TrEMBL
Match: A0A6J1BUQ5 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005926 PE=4 SV=1)

HSP 1 Score: 1144.8 bits (2960), Expect = 0.0e+00
Identity = 558/652 (85.58%), Postives = 600/652 (92.02%), Query Frame = 0 

Query: 1   MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAK 60
           MS LPPH N FSK STVTWWNSNIRDAVN GH FKALVL RQMKLNGLQPNNFTFPF+AK
Sbjct: 1   MSSLPPHFNRFSKFSTVTWWNSNIRDAVNHGHPFKALVLFRQMKLNGLQPNNFTFPFIAK 60

Query: 61  ACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIAS 120
           ACAKLS+L N+QIIH HV+KSPF SDIFVQTAMVDMYVKCCKVEDAYNLF+KMPVRDIAS
Sbjct: 61  ACAKLSNLCNTQIIHTHVVKSPFHSDIFVQTAMVDMYVKCCKVEDAYNLFEKMPVRDIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGI 180
           WNAMIIGF+Q GS DRVF LFVGM LVGI PD ATVIGLTRAVLS KSLRFLKAVHA+GI
Sbjct: 121 WNAMIIGFAQFGSPDRVFHLFVGMGLVGIRPDPATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDA 240
           ETGLDADVSVANTWIAAYSKCGELQ+A+MVF GIQKH RS VSWNSLI+CYA F +Y+DA
Sbjct: 181 ETGLDADVSVANTWIAAYSKCGELQVAEMVFKGIQKHARSSVSWNSLISCYAKFERYLDA 240

Query: 241 VNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN YKGL+CDGFKPDASTIISLLSSCMQPEAL+YGSLIHGHG QLGCDSDISL NTLISM
Sbjct: 241 VNTYKGLICDGFKPDASTIISLLSSCMQPEALVYGSLIHGHGVQLGCDSDISLTNTLISM 300

Query: 301 YSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTV 360
           YSRCGDI SA+ LFDGMSIRTCVSWTAMISGYSEVGRID+ALVLFNAMEEAGEKPD+VTV
Sbjct: 301 YSRCGDIFSARTLFDGMSIRTCVSWTAMISGYSEVGRIDEALVLFNAMEEAGEKPDLVTV 360

Query: 361 LSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSN 420
           LSLISGCGK GALELGHWI+ YS L+GLK+DVVV NALIDMY KCGS+SDAR+VF  L N
Sbjct: 361 LSLISGCGKAGALELGHWIERYSYLHGLKQDVVVSNALIDMYGKCGSMSDARDVFYGLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGREC 480
           +T+VSWTAMIAACALNGEFREALD+F+LMS+SGI PNH+TF+AVLQAC+H GYLEKGREC
Sbjct: 421 RTIVSWTAMIAACALNGEFREALDIFHLMSESGIMPNHVTFVAVLQACSHEGYLEKGREC 480

Query: 481 FVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540
           F+MMT+RYGINP LDHYSCMIDLLGRKGKLIEALEVIQDMPM+PD GIWGALLGACKIH 
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMEPDVGIWGALLGACKIHR 540

Query: 541 NMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIV 600
           NMQIGEYVS +LFELQPQVAVSFVEMANIYASVGRWDRVA MRK MRSNKVRKSPGKS V
Sbjct: 541 NMQIGEYVSRNLFELQPQVAVSFVEMANIYASVGRWDRVADMRKMMRSNKVRKSPGKSTV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQKDPSSNGQRIIVEYDME 653
           QVNGKSHVF VEDR HHDSLLIY+VLENL +Q+K+++ +S+ Q I VE DME
Sbjct: 601 QVNGKSHVFIVEDRGHHDSLLIYAVLENLTLQLKEEESTSHAQ-ITVENDME 651

[Close]
BLAST of Lcy09g008450 vs. NCBI nr
Match: XP_038881350.1 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Benincasa hispida])

HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 572/637 (89.80%), Postives = 601/637 (94.35%), Query Frame = 0 

Query: 1   MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAK 60
           MS LPP LN FSKLSTV WWNS+IRDAVNQG+A+KALVL RQMKLNGLQPNNFTFPFLAK
Sbjct: 1   MSSLPPRLNRFSKLSTVIWWNSSIRDAVNQGNAYKALVLFRQMKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIAS 120
           A AKLSHLTNSQIIH HV+KSPF SDIFVQTAMVDMYVKC KVEDAYNLFDKMPVRDIAS
Sbjct: 61  ASAKLSHLTNSQIIHTHVVKSPFHSDIFVQTAMVDMYVKCGKVEDAYNLFDKMPVRDIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGI 180
           WNAMIIGFS IGSLDRVFSLF+GMRLVGI PDAATVIGLTRAVLS KSLRFLKAVHA+ I
Sbjct: 121 WNAMIIGFSHIGSLDRVFSLFMGMRLVGIRPDAATVIGLTRAVLSAKSLRFLKAVHAIAI 180

Query: 181 ETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDA 240
           ETGLDAD SV+NTWIA YSKCGELQLAKMVF+GIQK+VRS VSWNSLIACYANFGKYVDA
Sbjct: 181 ETGLDADTSVSNTWIAGYSKCGELQLAKMVFYGIQKNVRSSVSWNSLIACYANFGKYVDA 240

Query: 241 VNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN YKGLL DGF PDASTIISLLS C QPEALIYGSLIH HGFQLGCDSDISLIN LISM
Sbjct: 241 VNTYKGLLSDGFTPDASTIISLLSCCQQPEALIYGSLIHAHGFQLGCDSDISLINALISM 300

Query: 301 YSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTV 360
           YSRCGDISSA ILFDGMSIRTCVSWTAMISGYSEVGRIDDA+VLFNAMEE GEKPD+VTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRIDDAMVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSN 420
           LSLISGCGKTGALELGHWIDNY+S+YGLKKDVVVCNALIDMYAKCGSL+DAR+VF SL N
Sbjct: 361 LSLISGCGKTGALELGHWIDNYASVYGLKKDVVVCNALIDMYAKCGSLNDARKVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLFYLMS+SGI+PN+ITFLAVLQAC+HGG+LEKG+E 
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFYLMSESGIEPNNITFLAVLQACSHGGFLEKGKEY 480

Query: 481 FVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540
           F+MMT+RYGINP LDHYSCMIDLLGR+GKLIEALEVI DMPMKPDEGIWGALL ACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRRGKLIEALEVIHDMPMKPDEGIWGALLSACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIV 600
           NMQIGEYVSHHLFELQP VAVSFVEMANIYASVGRWD VAAMRKTMRSNK+RKSPGKS+V
Sbjct: 541 NMQIGEYVSHHLFELQPLVAVSFVEMANIYASVGRWDEVAAMRKTMRSNKMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQKD 638
           QVNGKSHVFFVEDRSHHDSL IY+VL NL MQMKQK+
Sbjct: 601 QVNGKSHVFFVEDRSHHDSLHIYAVLGNLAMQMKQKE 637

[Close]
BLAST of Lcy09g008450 vs. NCBI nr
Match: XP_004143574.1 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Cucumis sativus] >XP_031743718.1 pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Cucumis sativus] >XP_031743719.1 pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Cucumis sativus])

HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 568/644 (88.20%), Postives = 605/644 (93.94%), Query Frame = 0 

Query: 1   MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAK 60
           MS L  HLNCFSKLST+TWWNS+IR AVNQG+A KAL L  Q+KLNGLQPNNFTFPFL+K
Sbjct: 1   MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60

Query: 61  ACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIH HV+KSPF SDI+VQTAMVDMYVKC KV+DAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGI 180
           WNAMIIGFSQIGSLDRVF+LF+GMRLVG  PDAATVIGLTRAV+S KSLRFLKAVHA+GI
Sbjct: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDA 240
           ETGLDAD SV+NTWIAAYSKCGELQLAKMVFHGIQK  RS VSWNSLIACYA+FGKYVDA
Sbjct: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240

Query: 241 VNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           V +YKGLLCDGFKPDASTIISLLSSC QPEALIYG LIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTV 360
           YSRCGDISSA ILFDGMSIRTCVSWTAMISGYSEVGR+DDALVLFNAMEE GEKPD+VTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSN 420
           LSLISGCGKTGAL LGHWIDNY+SL+ LKKDVVVCNALIDMYAKCGSL+DARE+F SL N
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S+SGI+PN+ITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540
           F+MMT+RYGINP LDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIV 600
           NM+IGEYVS +LFELQP+VAVSFVEMANIYASVGRWD VAAMRKTMRSN++RKSPGKS+V
Sbjct: 541 NMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQKDPSSNGQR 645
           QVNG SHVFFVEDRSHHDSLLIY  L NL MQMKQK+ SS+ QR
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQR 644

[Close]
BLAST of Lcy09g008450 vs. NCBI nr
Match: XP_008440673.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 1159.4 bits (2998), Expect = 0.0e+00
Identity = 568/646 (87.93%), Postives = 603/646 (93.34%), Query Frame = 0 

Query: 1   MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAK 60
           M  L PHLN FSKLST+TWWNS+IR AVNQG+A KAL L  Q+KLNGLQPNNFTFPFLAK
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIH HV+KSPF SDI+VQTAMVDMYVKC K EDAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGI 180
           WNAMI+GFSQIGSLDRVF+LF+GMRLVG  PDAATVIGLTRAVLS KSLRFLKAVHA+GI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDA 240
           ETGLDAD SV+NTWI+AYSKCGELQLAKMVFHGIQK+ RS VSWNSLIACYA+FGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN+YKGLLCDGFKPDA TIISLL SC QPEALIYGSLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTV 360
           YSRCGDISSA ILFDGMSIRTCVSWTAMISGYSEVGR+DDALVLFNAMEE GEKPD+VTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSN 420
           LSLISGCGKTGAL LGHWIDNY+SL+GLKKDVVVCNALIDMYAKCGSL+DAREVF SL N
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S+SGI+PN+ITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540
           F+MMT+RYGINP LDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIV 600
           NM+IGEYVS HLFELQP+VA SFVEMANIYA VGRWD VAAMRK MRSN++RKSPGKS+V
Sbjct: 541 NMEIGEYVSRHLFELQPRVAASFVEMANIYALVGRWDEVAAMRKRMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQKDPSSNGQRII 647
           QVNG SHVFFVEDRSHHDSLLIY  L NL MQMKQK+ SS+ QRII
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRII 646

[Close]
BLAST of Lcy09g008450 vs. NCBI nr
Match: XP_008440672.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 1159.4 bits (2998), Expect = 0.0e+00
Identity = 568/646 (87.93%), Postives = 603/646 (93.34%), Query Frame = 0 

Query: 1   MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAK 60
           M  L PHLN FSKLST+TWWNS+IR AVNQG+A KAL L  Q+KLNGLQPNNFTFPFLAK
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIH HV+KSPF SDI+VQTAMVDMYVKC K EDAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGI 180
           WNAMI+GFSQIGSLDRVF+LF+GMRLVG  PDAATVIGLTRAVLS KSLRFLKAVHA+GI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDA 240
           ETGLDAD SV+NTWI+AYSKCGELQLAKMVFHGIQK+ RS VSWNSLIACYA+FGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN+YKGLLCDGFKPDA TIISLL SC QPEALIYGSLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTV 360
           YSRCGDISSA ILFDGMSIRTCVSWTAMISGYSEVGR+DDALVLFNAMEE GEKPD+VTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSN 420
           LSLISGCGKTGAL LGHWIDNY+SL+GLKKDVVVCNALIDMYAKCGSL+DAREVF SL N
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S+SGI+PN+ITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540
           F+MMT+RYGINP LDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIV 600
           NM+IGEYVS HLFELQP+VA SFVEMANIYA VGRWD VAAMRK MRSN++RKSPGKS+V
Sbjct: 541 NMEIGEYVSRHLFELQPRVAASFVEMANIYALVGRWDEVAAMRKRMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQKDPSSNGQRII 647
           QVNG SHVFFVEDRSHHDSLLIY  L NL MQMKQK+ SS+ QRII
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRII 646

[Close]
BLAST of Lcy09g008450 vs. NCBI nr
Match: KAA0036256.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12650.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1159.4 bits (2998), Expect = 0.0e+00
Identity = 568/646 (87.93%), Postives = 603/646 (93.34%), Query Frame = 0 

Query: 1   MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAK 60
           M  L PHLN FSKLST+TWWNS+IR AVNQG+A KAL L  Q+KLNGLQPNNFTFPFLAK
Sbjct: 1   MCSLTPHLNRFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLAK 60

Query: 61  ACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIAS 120
           ACAKLSHLTNSQIIH HV+KSPF SDI+VQTAMVDMYVKC K EDAYNLFDKMPVR+IAS
Sbjct: 61  ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKAEDAYNLFDKMPVRNIAS 120

Query: 121 WNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGI 180
           WNAMI+GFSQIGSLDRVF+LF+GMRLVG  PDAATVIGLTRAVLS KSLRFLKAVHA+GI
Sbjct: 121 WNAMIMGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVLSAKSLRFLKAVHAIGI 180

Query: 181 ETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDA 240
           ETGLDAD SV+NTWI+AYSKCGELQLAKMVFHGIQK+ RS VSWNSLIACYA+FGK VDA
Sbjct: 181 ETGLDADNSVSNTWISAYSKCGELQLAKMVFHGIQKNARSSVSWNSLIACYAHFGKNVDA 240

Query: 241 VNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
           VN+YKGLLCDGFKPDA TIISLL SC QPEALIYGSLIHGHGFQLGCDSDISLINTLISM
Sbjct: 241 VNSYKGLLCDGFKPDACTIISLLCSCQQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300

Query: 301 YSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTV 360
           YSRCGDISSA ILFDGMSIRTCVSWTAMISGYSEVGR+DDALVLFNAMEE GEKPD+VTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360

Query: 361 LSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSN 420
           LSLISGCGKTGAL LGHWIDNY+SL+GLKKDVVVCNALIDMYAKCGSL+DAREVF SL N
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHGLKKDVVVCNALIDMYAKCGSLNDAREVFYSLPN 420

Query: 421 KTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGREC 480
           +TVVSWTAMIAACALNGEFREALDLF L+S+SGI+PN+ITFLAVLQAC HGGYLEKGREC
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480

Query: 481 FVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540
           F+MMT+RYGINP LDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540

Query: 541 NMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIV 600
           NM+IGEYVS HLFELQP+VA SFVEMANIYA VGRWD VAAMRK MRSN++RKSPGKS+V
Sbjct: 541 NMEIGEYVSRHLFELQPRVAASFVEMANIYALVGRWDEVAAMRKRMRSNQMRKSPGKSVV 600

Query: 601 QVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQKDPSSNGQRII 647
           QVNG SHVFFVEDRSHHDSLLIY  L NL MQMKQK+ SS+ QRII
Sbjct: 601 QVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRII 646

[Close]
BLAST of Lcy09g008450 vs. TAIR 10
Match: AT4G19191.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 718.8 bits (1854), Expect = 4.0e-207
Identity = 355/637 (55.73%), Postives = 454/637 (71.27%), Query Frame = 0 

Query: 1   MSLLPPHLNCFSKLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAK 60
           MSL+   L   S LS+V  WN  IR+AVN+    ++L+L R+MK  G +PNNFTFPF+AK
Sbjct: 1   MSLIHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAK 60

Query: 61  ACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIAS 120
           ACA+L+ +   +++HAH+IKSPF SD+FV TA VDM+VKC  V+ A  +F++MP RD  +
Sbjct: 61  ACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATT 120

Query: 121 WNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGI 180
           WNAM+ GF Q G  D+ FSLF  MRL  I PD+ TV+ L ++    KSL+ L+A+HAVGI
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI 180

Query: 181 ETGLDADVSVANTWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDA 240
             G+D  V+VANTWI+ Y KCG+L  AK+VF  I +  R+ VSWNS+   Y+ FG+  DA
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDA 240

Query: 241 VNAYKGLLCDGFKPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISM 300
              Y  +L + FKPD ST I+L +SC  PE L  G LIH H   LG D DI  INT ISM
Sbjct: 241 FGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 300

Query: 301 YSRCGDISSAKILFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEEAGEKPDVVTV 360
           YS+  D  SA++LFD M+ RTCVSWT MISGY+E G +D+AL LF+AM ++GEKPD+VT+
Sbjct: 301 YSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL 360

Query: 361 LSLISGCGKTGALELGHWIDNYSSLYGLKKD-VVVCNALIDMYAKCGSLSDAREVFDSLS 420
           LSLISGCGK G+LE G WID  + +YG K+D V++CNALIDMY+KCGS+ +AR++FD+  
Sbjct: 361 LSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420

Query: 421 NKTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGRE 480
            KTVV+WT MIA  ALNG F EAL LF  M D   KPNHITFLAVLQAC H G LEKG E
Sbjct: 421 EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 480

Query: 481 CFVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIH 540
            F +M + Y I+P LDHYSCM+DLLGRKGKL EALE+I++M  KPD GIWGALL ACKIH
Sbjct: 481 YFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH 540

Query: 541 NNMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSI 600
            N++I E  +  LF L+PQ+A  +VEMANIYA+ G WD  A +R  M+   ++K PG+S+
Sbjct: 541 RNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESV 600

Query: 601 VQVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMKQK 637
           +QVNGK+H F V +  H ++ +IY  L  L +  K K
Sbjct: 601 IQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKDK 637

[Close]
BLAST of Lcy09g008450 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 436.4 bits (1121), Expect = 4.0e-122
Identity = 222/601 (36.94%), Postives = 344/601 (57.24%), Query Frame = 0 

Query: 35  KALVLLRQMKLNGLQPNNFTFPFLAKACAKLSHLTNSQIIHAHVIKSPFQSDIFVQTAMV 94
           KAL    +M+ + ++P  + F +L K C   + L   + IH  ++KS F  D+F  T + 
Sbjct: 118 KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177

Query: 95  DMYVKCCKVEDAYNLFDKMPVRDIASWNAMIIGFSQIGSLDRVFSLFVGMRLVGIHPDAA 154
           +MY KC +V +A  +FD+MP RD+ SWN ++ G+SQ G       +   M    + P   
Sbjct: 178 NMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237

Query: 155 TVIGLTRAVLSVKSLRFLKAVHAVGIETGLDADVSVANTWIAAYSKCGELQLAKMVFHGI 214
           T++ +  AV +++ +   K +H   + +G D+ V+++   +  Y+KCG L+ A+ +F G+
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297

Query: 215 QKHVRSPVSWNSLIACYANFGKYVDAVNAYKGLLCDGFKPDASTIISLLSSCMQPEALIY 274
            +  R+ VSWNS+I  Y       +A+  ++ +L +G KP   +++  L +C     L  
Sbjct: 298 LE--RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 357

Query: 275 GSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSAKILFDGMSIRTCVSWTAMISGYSE 334
           G  IH    +LG D ++S++N+LISMY +C ++ +A  +F  +  RT VSW AMI G+++
Sbjct: 358 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ 417

Query: 335 VGRIDDALVLFNAMEEAGEKPDVVTVLSLISGCGKTGALELGHWIDNYSSLYGLKKDVVV 394
            GR  DAL  F+ M     KPD  T +S+I+   +        WI        L K+V V
Sbjct: 418 NGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFV 477

Query: 395 CNALIDMYAKCGSLSDAREVFDSLSNKTVVSWTAMIAACALNGEFREALDLFYLMSDSGI 454
             AL+DMYAKCG++  AR +FD +S + V +W AMI     +G  + AL+LF  M    I
Sbjct: 478 TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTI 537

Query: 455 KPNHITFLAVLQACTHGGYLEKGRECFVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEAL 514
           KPN +TFL+V+ AC+H G +E G +CF MM + Y I  S+DHY  M+DLLGR G+L EA 
Sbjct: 538 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 597

Query: 515 EVIQDMPMKPDEGIWGALLGACKIHNNMQIGEYVSHHLFELQPQVAVSFVEMANIYASVG 574
           + I  MP+KP   ++GA+LGAC+IH N+   E  +  LFEL P      V +ANIY +  
Sbjct: 598 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAAS 657

Query: 575 RWDRVAAMRKTMRSNKVRKSPGKSIVQVNGKSHVFFVEDRSHHDSLLIYSVLENLIMQMK 634
            W++V  +R +M    +RK+PG S+V++  + H FF    +H DS  IY+ LE LI  +K
Sbjct: 658 MWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 716

Query: 635 Q 636
           +
Sbjct: 718 E 716

[Close]
BLAST of Lcy09g008450 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )

HSP 1 Score: 399.8 bits (1026), Expect = 4.1e-111
Identity = 210/647 (32.46%), Postives = 358/647 (55.33%), Query Frame = 0 

Query: 16  TVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAKACAKLSHLTNSQIIH 75
           T   +NS IR   + G   +A++L  +M  +G+ P+ +TFPF   ACAK     N   IH
Sbjct: 98  TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157

Query: 76  AHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIASWNAMIIGFSQIGSLD 135
             ++K  +  D+FVQ ++V  Y +C +++ A  +FD+M  R++ SW +MI G+++     
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217

Query: 136 RVFSLFVGM-RLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGIETGLDADVSVANTW 195
               LF  M R   + P++ T++ +  A   ++ L   + V+A    +G++ +  + +  
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277

Query: 196 IAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDAVNAYKGLLCDGFKP 255
           +  Y KC  + +AK +F   +    +    N++ + Y   G   +A+  +  ++  G +P
Sbjct: 278 VDMYMKCNAIDVAKRLFD--EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 337

Query: 256 DASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSAKILF 315
           D  +++S +SSC Q   +++G   HG+  + G +S  ++ N LI MY +C    +A  +F
Sbjct: 338 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 397

Query: 316 DGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEE------------------------ 375
           D MS +T V+W ++++GY E G +D A   F  M E                        
Sbjct: 398 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 457

Query: 376 --------AGEKPDVVTVLSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMY 435
                    G   D VT++S+ S CG  GAL+L  WI  Y    G++ DV +   L+DM+
Sbjct: 458 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 517

Query: 436 AKCGSLSDAREVFDSLSNKTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFL 495
           ++CG    A  +F+SL+N+ V +WTA I A A+ G    A++LF  M + G+KP+ + F+
Sbjct: 518 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 577

Query: 496 AVLQACTHGGYLEKGRECFVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPM 555
             L AC+HGG +++G+E F  M K +G++P   HY CM+DLLGR G L EA+++I+DMPM
Sbjct: 578 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 637

Query: 556 KPDEGIWGALLGACKIHNNMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAM 615
           +P++ IW +LL AC++  N+++  Y +  +  L P+   S+V ++N+YAS GRW+ +A +
Sbjct: 638 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 697

Query: 616 RKTMRSNKVRKSPGKSIVQVNGKSHVFFVEDRSHHDSLLIYSVLENL 630
           R +M+   +RK PG S +Q+ GK+H F   D SH +   I ++L+ +
Sbjct: 698 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEV 742

[Close]
BLAST of Lcy09g008450 vs. TAIR 10
Match: AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )

HSP 1 Score: 399.8 bits (1026), Expect = 4.1e-111
Identity = 210/647 (32.46%), Postives = 358/647 (55.33%), Query Frame = 0 

Query: 16  TVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAKACAKLSHLTNSQIIH 75
           T   +NS IR   + G   +A++L  +M  +G+ P+ +TFPF   ACAK     N   IH
Sbjct: 98  TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157

Query: 76  AHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIASWNAMIIGFSQIGSLD 135
             ++K  +  D+FVQ ++V  Y +C +++ A  +FD+M  R++ SW +MI G+++     
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217

Query: 136 RVFSLFVGM-RLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGIETGLDADVSVANTW 195
               LF  M R   + P++ T++ +  A   ++ L   + V+A    +G++ +  + +  
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277

Query: 196 IAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDAVNAYKGLLCDGFKP 255
           +  Y KC  + +AK +F   +    +    N++ + Y   G   +A+  +  ++  G +P
Sbjct: 278 VDMYMKCNAIDVAKRLFD--EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 337

Query: 256 DASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSAKILF 315
           D  +++S +SSC Q   +++G   HG+  + G +S  ++ N LI MY +C    +A  +F
Sbjct: 338 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 397

Query: 316 DGMSIRTCVSWTAMISGYSEVGRIDDALVLFNAMEE------------------------ 375
           D MS +T V+W ++++GY E G +D A   F  M E                        
Sbjct: 398 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 457

Query: 376 --------AGEKPDVVTVLSLISGCGKTGALELGHWIDNYSSLYGLKKDVVVCNALIDMY 435
                    G   D VT++S+ S CG  GAL+L  WI  Y    G++ DV +   L+DM+
Sbjct: 458 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 517

Query: 436 AKCGSLSDAREVFDSLSNKTVVSWTAMIAACALNGEFREALDLFYLMSDSGIKPNHITFL 495
           ++CG    A  +F+SL+N+ V +WTA I A A+ G    A++LF  M + G+KP+ + F+
Sbjct: 518 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 577

Query: 496 AVLQACTHGGYLEKGRECFVMMTKRYGINPSLDHYSCMIDLLGRKGKLIEALEVIQDMPM 555
             L AC+HGG +++G+E F  M K +G++P   HY CM+DLLGR G L EA+++I+DMPM
Sbjct: 578 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 637

Query: 556 KPDEGIWGALLGACKIHNNMQIGEYVSHHLFELQPQVAVSFVEMANIYASVGRWDRVAAM 615
           +P++ IW +LL AC++  N+++  Y +  +  L P+   S+V ++N+YAS GRW+ +A +
Sbjct: 638 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 697

Query: 616 RKTMRSNKVRKSPGKSIVQVNGKSHVFFVEDRSHHDSLLIYSVLENL 630
           R +M+   +RK PG S +Q+ GK+H F   D SH +   I ++L+ +
Sbjct: 698 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEV 742

[Close]
BLAST of Lcy09g008450 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 399.4 bits (1025), Expect = 5.4e-111
Identity = 208/622 (33.44%), Postives = 358/622 (57.56%), Query Frame = 0 

Query: 13  KLSTVTWWNSNIRDAVNQGHAFKALVLLRQMKLNGLQPNNFTFPFLAKACAKLSHLTNSQ 72
           K+    +WN  + +    G    ++ L ++M  +G++ +++TF  ++K+ + L  +   +
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215

Query: 73  IIHAHVIKSPFQSDIFVQTAMVDMYVKCCKVEDAYNLFDKMPVRDIASWNAMIIGFSQIG 132
            +H  ++KS F     V  ++V  Y+K  +V+ A  +FD+M  RD+ SWN++I G+   G
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275

Query: 133 SLDRVFSLFVGMRLVGIHPDAATVIGLTRAVLSVKSLRFLKAVHAVGIETGLDADVSVAN 192
             ++  S+FV M + GI  D AT++ +       + +   +AVH++G++     +    N
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335

Query: 193 TWIAAYSKCGELQLAKMVFHGIQKHVRSPVSWNSLIACYANFGKYVDAVNAYKGLLCDGF 252
           T +  YSKCG+L  AK VF  +    RS VS+ S+IA YA  G   +AV  ++ +  +G 
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSD--RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 395

Query: 253 KPDASTIISLLSSCMQPEALIYGSLIHGHGFQLGCDSDISLINTLISMYSRCGDISSAKI 312
            PD  T+ ++L+ C +   L  G  +H    +     DI + N L+ MY++CG +  A++
Sbjct: 396 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 455

Query: 313 LFDGMSIRTCVSWTAMISGYSEVGRIDDALVLFN-AMEEAGEKPDVVTVLSLISGCGKTG 372
           +F  M ++  +SW  +I GYS+    ++AL LFN  +EE    PD  TV  ++  C    
Sbjct: 456 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 515

Query: 373 ALELGHWIDNYSSLYGLKKDVVVCNALIDMYAKCGSLSDAREVFDSLSNKTVVSWTAMIA 432
           A + G  I  Y    G   D  V N+L+DMYAKCG+L  A  +FD +++K +VSWT MIA
Sbjct: 516 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 575

Query: 433 ACALNGEFREALDLFYLMSDSGIKPNHITFLAVLQACTHGGYLEKGRECFVMMTKRYGIN 492
              ++G  +EA+ LF  M  +GI+ + I+F+++L AC+H G +++G   F +M     I 
Sbjct: 576 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 635

Query: 493 PSLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMQIGEYVSHH 552
           P+++HY+C++D+L R G LI+A   I++MP+ PD  IWGALL  C+IH+++++ E V+  
Sbjct: 636 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 695

Query: 553 LFELQPQVAVSFVEMANIYASVGRWDRVAAMRKTMRSNKVRKSPGKSIVQVNGKSHVFFV 612
           +FEL+P+    +V MANIYA   +W++V  +RK +    +RK+PG S +++ G+ ++F  
Sbjct: 696 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVA 755

Query: 613 EDRSHHDSLLIYSVLENLIMQM 634
            D S+ ++  I + L  +  +M
Sbjct: 756 GDSSNPETENIEAFLRKVRARM 775

The following BLAST results are available for this feature:
BLAST of Lcy09g008450 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0C8Q25.7e-20655.73Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidop... [more]
Q3E6Q15.6e-12136.94Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q9LUJ25.8e-11032.46Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... [more]
Q9SN397.6e-11033.44Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Q9SS831.4e-10836.71Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... [more]
BLAST of Lcy09g008450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK940.0e+0088.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501860 PE=4 SV=1[more]
A0A5D3CMI90.0e+0087.93Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B2E40.0e+0087.93pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X2 ... [more]
A0A1S3B2960.0e+0087.93pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 ... [more]
A0A6J1BUQ50.0e+0085.58pentatricopeptide repeat-containing protein At4g19191, mitochondrial isoform X1 ... [more]
BLAST of Lcy09g008450 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038881350.10.0e+0089.80pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Benincasa ... [more]
XP_004143574.10.0e+0088.20pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Cucumis sa... [more]
XP_008440673.10.0e+0087.93PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial ... [more]
XP_008440672.10.0e+0087.93PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial ... [more]
KAA0036256.10.0e+0087.93pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12650... [more]
BLAST of Lcy09g008450 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G19191.14.0e-20755.73Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G11290.14.0e-12236.94Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G22690.14.1e-11132.46CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... [more]
AT3G22690.24.1e-11132.46INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... [more]
AT4G18750.15.4e-11133.44Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 120..148
e-value: 0.0016
score: 18.5
coord: 393..418
e-value: 7.4E-4
score: 19.6
coord: 295..317
e-value: 0.013
score: 15.6
coord: 222..251
e-value: 0.0032
score: 17.6
coord: 91..117
e-value: 0.0053
score: 16.9
coord: 192..215
e-value: 0.17
score: 12.2
coord: 496..521
e-value: 2.9E-4
score: 20.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 323..368
e-value: 2.7E-11
score: 43.5
coord: 421..468
e-value: 7.5E-10
score: 38.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 323..357
e-value: 9.8E-9
score: 32.9
coord: 424..457
e-value: 4.0E-9
score: 34.1
coord: 222..256
e-value: 3.0E-5
score: 21.9
coord: 120..153
e-value: 1.3E-4
score: 19.9
coord: 90..118
e-value: 0.0013
score: 16.7
coord: 393..419
e-value: 2.1E-4
score: 19.3
coord: 497..520
e-value: 0.0031
score: 15.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 10.040608
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 391..421
score: 9.558311
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 117..151
score: 10.226951
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 321..355
score: 11.816339
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 422..456
score: 11.860184
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 469..598
e-value: 6.0E-15
score: 57.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 169..276
e-value: 4.0E-16
score: 60.9
coord: 375..468
e-value: 1.7E-27
score: 97.9
coord: 277..374
e-value: 8.3E-23
score: 82.7
coord: 74..168
e-value: 1.8E-17
score: 65.2
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 10..637
NoneNo IPR availablePANTHERPTHR24015:SF1993REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 10..637

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g008450.1Lcy09g008450.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding