Lcy09g007770 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g007770
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DEAD-box ATP-dependent RNA helicase 39-like
Location	Chr09: 7011171 .. 7015011 (+)
RNA-Seq Expression	Lcy09g007770
Synteny	Lcy09g007770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGTATATATCTTAGGCTAACTATGCTAGTGTCGGCGAACAAAAAAACAATTTAAAAAGGTCTAATTATCCAAAATCAATTTTATAAATTTCAGACTAAAAATGGACGAAAAATATCTCTAATTTTGGAAAAACGTAACCTAACAATAGAATCCGAGGCGGGACGAAGGGCCGAACAGCACCGCCATGGGAAGTAGAAGAAAAGCTCTTCTCGAGCTCTCCCACTGCGCAAGCAGCCTCCTATGTCCAACCAAACGTTCGATTTCCCCCAATCCCACATTCTCCACGAACACTCTTTTAGCTTCTCGATTATTTTCCTCTTCCTTCTCCAGAAATTCTACTGATGGCACCGCCTTGGAAAATGATCGACCGCCGCAATCGAACAGAGACTCAATGCTTCTTGAAAAGTTCAGGCTCAGAAAACTCAGAGTCTCGTCGAAAATCCCGCAAGAATCATCGAGTTCTTACTCTGCTAAGAAAGGGAGTGGGAACGGAGGTGAGAAGGTGATGACAGGTTTCAAGGAGTTAGGGCTTTGTAATGAAGTGGCTGAGGCTGTTGAAGAAATGGGATTCTTTGTTCCTTCTGAGTTACATTGCGTAGGGATTCCAGCTCTTTTGGAAGGAAAGAATGTGGTGCTGGGATCACTTTATGGACCGGAAAGGGCTCTGGCTTACTTGTTGCCTCTCATTCAGGTTCTTGTTCTTTTATCCATTTGAATACTTGAGTCCTTTGGCACTTTCTTTAGCGGAATTGATGATGGCTTTGAGTTCACAATATCAATCAACAGTGTATTTGATGTAGATGTCACTTGTCAGTCTCTATCTATCCTACCATTTCTGGATTAGAATTTACCTTTGGGTTGATTTTTAGGAATTATGATGAGGCAATCTGTCAAATCAATTCTCAGAAGTAGCTTGAAGTGATATGTTATGGTACTCTTTTAATATATTTTCTAACACGTGCACTTGAATTATGCGTGCTTGAATATTAATTTGACTAATGAGACTCCATAAATAGAATAGAAGAATACTAATATGGAATAGGGAAGAAATTACAGAGGAATTTTGAACTTTTTTCTTTACTTCGACAACAGTGAAAGATTCGAACATCTGACCTTTTTGTCGAAGATATGTTCATGTTGGCTGGATGTTTGAAGTTGGGACCTAGCAGTCGTATGTTAAATTTACACTAAACCAAAAGCTTTAATTAATAAGCTATGATAAATGTAATTTTTTAATATGCTCATTATTTTCATTCCCTGTTCTTGAATTGTGGAATTGGCTATCGTGCTTGGTCTATTCTTATTTATTTTCAAGGATTTGCACTCCCCTCTCCACGTCTTTTATTTGATCTACATTTGGAATGTTTAAATTTTCCATCTAGATTTGAAGAAAGTACAATAAAAAATTTCATGATTTTTTTTTTTTCATTCATTGTTATGTCTACAATTGGCTCTTATTAGAATCTAAAAAGGGTTGGAAAAACGAATGGTATAAGGTCCCAGCATCCTCGAGCCTTTGTTCTGTGCTCAACCACGGAGCTATCTGATGAGGTATCGCTTTCTTAGAACTTCATGAATAAGAGGTTAAGAGTCTTAAGACCAACTTCAATTTTTCTAACATAGGATGCACCCTGCAGGTGTTTCAGATGGCAAAGTTCATCAGCAAATACAGACAGTTGAAAACTGCAAGGGACAATGGTTGTGGTCAATTAGGACTTCAGAAAGGTGCATCAGATGTCTCGATTGGTTTGTTAATTGGCACCCCTGCTGAGGTCTCCGAATTCATTGAAGAGGGAAGTGTGGTTCCTGATGAAATCAAGTACTTGGTATGTAGTCAACTATTCATACTACATCTTTCTTTAAAAATTATCTGAAGTTTTTCTTGGACAGTAATTGGTAAGCTGTAATGTAATTCTTAGTTGCTTTTTTTTAAGAGAAAAAAAAAATCTGTTCCTTGCTGTTTAAGTCGCAGATATCTTATCTTTTAAATTTCCTTCCATTTATAACCATAATGTAAAAAGAAAAAAAAATATGGTGGCCTTTATGTTTGTTTTATGCATGTGCATTTTTTTTTATCAAGTAACTTAAAGCGATGGTGTATAGCCTACATCGAGTCAATTACTTATATATTATTCTTAATTTATAGTGTTGATTGACCCTTGTTACTTTTTAATCTCTGCTATATTTATCTTTAGGAGTAGGTCATATTTTTTACAAAATAACTAATTTTCAGTTATTTCTGTCTTAAAATATGCTAAGCTGCTAATTTAGATAAAATTATACCCGTATCTCAGTTCATATTCTTATGAAACTATCAAGTTTGTCATTTCGTGTTATAATTTTTCTTGTGAAACAGGTATTAGATGAGTTGGATATGATGTTCGATCTTGGCTTTGGCCCCAGCATTAAAAAGATTTTAACTTCAGTTAAACATTCTACCTCAAGATATTGCAATCAAAAGTGTCAATCTGTTGTGGTTACGTCGACATTGATAAAGGTTATTTGGTCTACTCTGCCTCATTACCTGATATAGAACTCTTGTGCATCTATACAATAGGTCTTGGAACTTTTTCTTCGTGTTAACAATTTGTCTTATAAATTATAGATGTTGCACGAACAACATTCATCCCTTGTCGAGTCTCTTAAGCATGGTGATGCGGGAGAGATTGCTGCTATGCTTCTAGAAATTGAGGAAGAAGAGGCATTCCATCTTATGGAATCTCCAGATACTCTGAAATGTAAACTTGCCAATGCAGTCGAGTCGCTTCATGCATCCACCCAGAGAACTTAAAATTTGATATTGACTTGTTTGACACGATTGTAAATAACTTTTTAATGTTATCATGTCTACATTTACGATCATTGGTTTGTGAACCTAGGCCGGTTCTTCTCATAAGATGATGTCAAATGGGGTGCTGTTTCTGTGTTTTTGGTAATACAAATATCATTTCATTTCAAGACTGCATACAATCCAGGGGTTTGAAAGATACGAGTCTGCATACAATGGTGAACTCTCAGCGAGAGGACAGAAAAGCAATGAAAAAGGTAGATTTTGAGCTGCATATCTTATCATCATTCAACTTTTCGTCTTGCAATTTTCTATACGTCTTCATTTCCAGGTTAGTAAAGGACGTGGAGTTTTGGCCGGGGTTACAACATTTCCGTTGGGGTCGTATAATATGACGCCCGAGAAGTCCGGTAGCTGACACTTCCCACCCATGAGTATGTTCTTCTGCCACACCGCAGCTTGTTGCTCTCTGCTGAAGAACATTTCATCGTTGACATTCTCTGGCTCAGTGGCATTCACAACACAGGCGTTCGCTCGGTGCGTGGTCACAACCGTTGCTTCTTGGTTCAGCTCTATTACAGGATCCTCAAACTCCTCGTAGCCATAATCCAAGCAAGCATTCCAACGACGGCGCCATTTCCGGGCATGGGAAGCACACATGAACAATGCAAAAGCACACAAGAGAAGGCTCACACCAGCCATGCCAACCTGAGCTGTGCCTTGTGAAGGATGCATCATTTGCAGTTGCCTTGCCATTTTGGGGAAATCTGAAAATTTTTGTTTGAAGACTTTTTAAGGCAGAATGTTATTTATACAAGTTTTTAAGTGGGGCTGTTGGTTTTGGAGGTTTTGTTGACCTTTTTTGAATGACCTGATTTGTGGTTTTGGTGATCATTTTCCACTTATCTCTGCTTGTGATTTAGTTTGTATTCTTTTGGAACTTTGAATGAAGGATCACCAAACTTTGGGTTATTTTATAAACCCAACAACTCTTTGACACTGAGATTCATATATCCATTTTCAAATTTTTGGATAGATATCCATCAATTA

mRNA sequence

ATTAGTATATATCTTAGGCTAACTATGCTAGTGTCGGCGAACAAAAAAACAATTTAAAAAGGTCTAATTATCCAAAATCAATTTTATAAATTTCAGACTAAAAATGGACGAAAAATATCTCTAATTTTGGAAAAACGTAACCTAACAATAGAATCCGAGGCGGGACGAAGGGCCGAACAGCACCGCCATGGGAAGTAGAAGAAAAGCTCTTCTCGAGCTCTCCCACTGCGCAAGCAGCCTCCTATGTCCAACCAAACGTTCGATTTCCCCCAATCCCACATTCTCCACGAACACTCTTTTAGCTTCTCGATTATTTTCCTCTTCCTTCTCCAGAAATTCTACTGATGGCACCGCCTTGGAAAATGATCGACCGCCGCAATCGAACAGAGACTCAATGCTTCTTGAAAAGTTCAGGCTCAGAAAACTCAGAGTCTCGTCGAAAATCCCGCAAGAATCATCGAGTTCTTACTCTGCTAAGAAAGGGAGTGGGAACGGAGGTGAGAAGGTGATGACAGGTTTCAAGGAGTTAGGGCTTTGTAATGAAGTGGCTGAGGCTGTTGAAGAAATGGGATTCTTTGTTCCTTCTGAGTTACATTGCGTAGGGATTCCAGCTCTTTTGGAAGGAAAGAATGTGGTGCTGGGATCACTTTATGGACCGGAAAGGGCTCTGGCTTACTTGTTGCCTCTCATTCAGAATCTAAAAAGGGTTGGAAAAACGAATGGTATAAGGTCCCAGCATCCTCGAGCCTTTGTTCTGTGCTCAACCACGGAGCTATCTGATGAGGTGTTTCAGATGGCAAAGTTCATCAGCAAATACAGACAGTTGAAAACTGCAAGGGACAATGGTTGTGGTCAATTAGGACTTCAGAAAGGTGCATCAGATGTCTCGATTGGTTTGTTAATTGGCACCCCTGCTGAGGTCTCCGAATTCATTGAAGAGGGAAGTGTGGTTCCTGATGAAATCAAGTACTTGGTATTAGATGAGTTGGATATGATGTTCGATCTTGGCTTTGGCCCCAGCATTAAAAAGATTTTAACTTCAGTTAAACATTCTACCTCAAGATATTGCAATCAAAAGTGTCAATCTGTTGTGGTTACGTCGACATTGATAAAGATGTTGCACGAACAACATTCATCCCTTGTCGAGTCTCTTAAGCATGGTGATGCGGGAGAGATTGCTGCTATGCTTCTAGAAATTGAGGAAGAAGAGGCATTCCATCTTATGGAATCTCCAGATACTCTGAAATGTAAACTTGCCAATGCAGTCGAGTCGCTTCATGCATCCACCCAGAGAACTTAAAATTTGATATTGACTTGTTTGACACGATTGTAAATAACTTTTTAATGTTATCATGTCTACATTTACGATCATTGGTTTGTGAACCTAGGCCGGTTCTTCTCATAAGATGATGTCAAATGGGGTGCTGTTTCTGTGTTTTTGGTAATACAAATATCATTTCATTTCAAGACTGCATACAATCCAGGGGTTTGAAAGATACGAGTCTGCATACAATGGTGAACTCTCAGCGAGAGGACAGAAAAGCAATGAAAAAGGTTAGTAAAGGACGTGGAGTTTTGGCCGGGGTTACAACATTTCCGTTGGGGTCGTATAATATGACGCCCGAGAAGTCCGGTAGCTGACACTTCCCACCCATGAGTATGTTCTTCTGCCACACCGCAGCTTGTTGCTCTCTGCTGAAGAACATTTCATCGTTGACATTCTCTGGCTCAGTGGCATTCACAACACAGGCGTTCGCTCGGTGCGTGGTCACAACCGTTGCTTCTTGGTTCAGCTCTATTACAGGATCCTCAAACTCCTCGTAGCCATAATCCAAGCAAGCATTCCAACGACGGCGCCATTTCCGGGCATGGGAAGCACACATGAACAATGCAAAAGCACACAAGAGAAGGCTCACACCAGCCATGCCAACCTGAGCTGTGCCTTGTGAAGGATGCATCATTTGCAGTTGCCTTGCCATTTTGGGGAAATCTGAAAATTTTTGTTTGAAGACTTTTTAAGGCAGAATGTTATTTATACAAGTTTTTAAGTGGGGCTGTTGGTTTTGGAGGTTTTGTTGACCTTTTTTGAATGACCTGATTTGTGGTTTTGGTGATCATTTTCCACTTATCTCTGCTTGTGATTTAGTTTGTATTCTTTTGGAACTTTGAATGAAGGATCACCAAACTTTGGGTTATTTTATAAACCCAACAACTCTTTGACACTGAGATTCATATATCCATTTTCAAATTTTTGGATAGATATCCATCAATTA

Coding sequence (CDS)

ATGGGAAGTAGAAGAAAAGCTCTTCTCGAGCTCTCCCACTGCGCAAGCAGCCTCCTATGTCCAACCAAACGTTCGATTTCCCCCAATCCCACATTCTCCACGAACACTCTTTTAGCTTCTCGATTATTTTCCTCTTCCTTCTCCAGAAATTCTACTGATGGCACCGCCTTGGAAAATGATCGACCGCCGCAATCGAACAGAGACTCAATGCTTCTTGAAAAGTTCAGGCTCAGAAAACTCAGAGTCTCGTCGAAAATCCCGCAAGAATCATCGAGTTCTTACTCTGCTAAGAAAGGGAGTGGGAACGGAGGTGAGAAGGTGATGACAGGTTTCAAGGAGTTAGGGCTTTGTAATGAAGTGGCTGAGGCTGTTGAAGAAATGGGATTCTTTGTTCCTTCTGAGTTACATTGCGTAGGGATTCCAGCTCTTTTGGAAGGAAAGAATGTGGTGCTGGGATCACTTTATGGACCGGAAAGGGCTCTGGCTTACTTGTTGCCTCTCATTCAGAATCTAAAAAGGGTTGGAAAAACGAATGGTATAAGGTCCCAGCATCCTCGAGCCTTTGTTCTGTGCTCAACCACGGAGCTATCTGATGAGGTGTTTCAGATGGCAAAGTTCATCAGCAAATACAGACAGTTGAAAACTGCAAGGGACAATGGTTGTGGTCAATTAGGACTTCAGAAAGGTGCATCAGATGTCTCGATTGGTTTGTTAATTGGCACCCCTGCTGAGGTCTCCGAATTCATTGAAGAGGGAAGTGTGGTTCCTGATGAAATCAAGTACTTGGTATTAGATGAGTTGGATATGATGTTCGATCTTGGCTTTGGCCCCAGCATTAAAAAGATTTTAACTTCAGTTAAACATTCTACCTCAAGATATTGCAATCAAAAGTGTCAATCTGTTGTGGTTACGTCGACATTGATAAAGATGTTGCACGAACAACATTCATCCCTTGTCGAGTCTCTTAAGCATGGTGATGCGGGAGAGATTGCTGCTATGCTTCTAGAAATTGAGGAAGAAGAGGCATTCCATCTTATGGAATCTCCAGATACTCTGAAATGTAAACTTGCCAATGCAGTCGAGTCGCTTCATGCATCCACCCAGAGAACTTAA

Protein sequence

MGSRRKALLELSHCASSLLCPTKRSISPNPTFSTNTLLASRLFSSSFSRNSTDGTALENDRPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSSYSAKKGSGNGGEKVMTGFKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNGIRSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIGTPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVKHSTSRYCNQKCQSVVVTSTLIKMLHEQHSSLVESLKHGDAGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLHASTQRT

Homology

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BLAST of Lcy09g007770 vs. ExPASy Swiss-Prot
Match: Q5VRY0 (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.7e-43
Identity = 108/307 (35.18%), Postives = 180/307 (58.63%), Query Frame = 0


Query: 37  LLASRLFSSSFSRNSTDGTALENDRPPQS------NRDSMLLEKFRLRKLRVSSKIPQES 96
           LL + L +++ +  +   +A+     P++      +R  +LLE+ R R L+    +P  +
Sbjct: 24  LLRAALATTTTTTTAAGASAVTAPTEPETTAREAPSRHELLLERLRQRHLK---GVPAAT 83

Query: 97  SSSYSAKKGSGNGG-----------EKVMTGFKELGLCNEVAEAVEEMGFFVPSELHCVG 156
                 +KG G GG            +V+  F+ELGL  EV  A+ EMG   P+E+ CVG
Sbjct: 84  PRPAQREKGRGGGGGGAQELQQKRRVEVVDSFEELGLGEEVMAALGEMGISKPTEIQCVG 143

Query: 157 IPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNG--IRSQHPRAFVLCSTTELS 216
           +PA+L G +VVLGS  G  + LAYLLPL+Q L+R     G  ++ + PRA VLC T EL+
Sbjct: 144 VPAVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELT 203

Query: 217 DEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIGTPAEVSEFIEEGSVVPD 276
           ++VF++AK IS + + ++   +G  ++  Q+ + ++ + +++GTP  + + I++G++V  
Sbjct: 204 EQVFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYG 263

Query: 277 EIKYLVLDELDMMFDLGFGPSIKKILTSVKHSTSRYCNQKCQSVVVTSTLIKMLHEQHSS 325
           +IKYLVLDE D MFD GFGP I+K L  +K+  ++  +Q  Q+V+VT+T+ K + +    
Sbjct: 264 DIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDE 323

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BLAST of Lcy09g007770 vs. ExPASy Swiss-Prot
Match: Q56X76 (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 PE=2 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 1.0e-42
Identity = 101/284 (35.56%), Postives = 169/284 (59.51%), Query Frame = 0


Query: 46  SFSRNSTDGTALENDRPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSS---YSAKKGSGN 105
           S +  ++  T   N   P   + ++LLE+ RLR L+ S+K PQ+  SS      +     
Sbjct: 46  SAAATTSSPTTETNVTDPDQLKHTILLERLRLRHLKESAKPPQQRPSSVVGVEEESSIRK 105

Query: 106 GGEKVMTGFKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALA 165
             +K++  F+ELGL  EV  A++E+   VP+E+ C+GIPA++E K+VVLGS  G  + LA
Sbjct: 106 KSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLA 165

Query: 166 YLLPLIQNLKRVGKTNG--IRSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNG 225
           YLLP++Q ++      G   + + PR  VLC T ELS++V+++AK IS + + ++   +G
Sbjct: 166 YLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSG 225

Query: 226 CGQLGLQKGASDVSIGLLIGTPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIK 285
             ++  Q+ + + +I +++GTP  + + IEEG++V  +I YLVLDE D MFD GFGP I+
Sbjct: 226 GSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIR 285

Query: 286 KILTSVKHSTSRYCNQKCQSVVVTSTLIKMLHEQHSSLVESLKH 325
           K L  +     +  +Q  Q+V+VT+T+   + +      + ++H
Sbjct: 286 KFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEH 329

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BLAST of Lcy09g007770 vs. ExPASy Swiss-Prot
Match: A1SAL1 (ATP-dependent RNA helicase RhlB OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) OX=326297 GN=rhlB PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.5e-17
Identity = 54/182 (29.67%), Postives = 92/182 (50.55%), Query Frame = 0


Query: 111 FKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQN 170
           F +L LC+EV +A+ E GF   + +  + +P LLE K++   +  G  + LA+L+    +
Sbjct: 11  FADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKTLAFLVATFNH 70

Query: 171 LKRVGKTNGIRSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGA 230
           L         +   PRA V+  T EL+ ++ + A  +SK+  LK     G      Q+  
Sbjct: 71  LLTTPVPEHRQLNQPRAIVMAPTRELAIQIAKDATLLSKHSGLKVGIVYGGEGYEAQRKV 130

Query: 231 SDVSIGLLIGTPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVKHST 290
            D  + +LIGT   + +++ +G +    I+ +VLDE D MFDLGF   I+ +   +  + 
Sbjct: 131 LDKGVDVLIGTTGRIIDYVRQGVINLGAIQAVVLDEADRMFDLGFIKDIRFLFNRMPGAK 190

Query: 291 SR 293
            R
Sbjct: 191 ER 192

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BLAST of Lcy09g007770 vs. ExPASy Swiss-Prot
Match: A5UDI1 (ATP-dependent RNA helicase RhlB OS=Haemophilus influenzae (strain PittEE) OX=374930 GN=rhlB PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.5e-17
Identity = 56/173 (32.37%), Postives = 92/173 (53.18%), Query Frame = 0


Query: 111 FKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQN 170
           F +L L   V + + + GF   + +  + +P  L G++V   +  G  + +A+L     +
Sbjct: 11  FSDLSLHPIVRDTLAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKTMAFLTATFHH 70

Query: 171 LKRVGKTNGIRSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGA 230
           L      N +   HPRA +L ST EL+ ++   A+F++K   LKTA   G      Q  A
Sbjct: 71  LLTHQDPN-LEYPHPRALILASTRELAVQISNDAEFLAKACGLKTALAYGGDGYDKQLQA 130

Query: 231 SDVSIGLLIGTPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKIL 284
            +  + +LIGT   V +++++G +  DEI+ +VLDE D MFDLGF   I+ +L
Sbjct: 131 IERGVDILIGTTGRVIDYVKQGVIGLDEIQVVVLDEADRMFDLGFIRDIRYLL 182

[Close]

BLAST of Lcy09g007770 vs. ExPASy Swiss-Prot
Match: Q8TDD1 (ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 3.3e-17
Identity = 60/212 (28.30%), Postives = 106/212 (50.00%), Query Frame = 0


Query: 102 NGGEKVMTGFKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERAL 161
           N  +K   GF+ +GL   V + + + G+ VP+ +    IP +L+GK+VV  +  G  +  
Sbjct: 89  NKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTA 148

Query: 162 AYLLPLIQNLKRVGKTNGIRSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGC 221
            +LLP+ + LK      G      RA +L  T EL+ +  +  K + K+  LKTA   G 
Sbjct: 149 CFLLPMFERLKTHSAQTG-----ARALILSPTRELALQTLKFTKELGKFTGLKTALILGG 208

Query: 222 GQLGLQKGASDVSIGLLIGTPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKK 281
            ++  Q  A   +  ++I TP  +     E S+    ++Y+V DE D +F++GF   +++
Sbjct: 209 DRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQE 268

Query: 282 ILTSVKHSTSRYCNQKCQSVVVTSTLIKMLHE 314
           I+  +            Q+V+ ++TL K+L E
Sbjct: 269 IIARLPGGH--------QTVLFSATLPKLLVE 287

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BLAST of Lcy09g007770 vs. ExPASy TrEMBL
Match: A0A6J1H541 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita moschata OX=3662 GN=LOC111460659 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 5.2e-159
Identity = 305/370 (82.43%), Postives = 324/370 (87.57%), Query Frame = 0


Query: 1   MGSRRKALLELSHCASSLLCPTKRSISPNPTFSTNTLLASRLFSSSFSRNSTDGTALEND 60
           MGSRRKALLEL H  +SL CPTK ++  NP  STN  LASR FSSSFSR  T     END
Sbjct: 1   MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRYFSSSFSRTLT----TEND 60

Query: 61  RPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSSYSAKKGSGNGGEKVMTGFKELGLCNEV 120
           RPP+++R++MLLEKFR RKL+ SS I +ES SS SA KGSGNGGEKVMTGFKELGL NEV
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNGI 180
           AEA E MGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKR  KTNG+
Sbjct: 121 AEAAEGMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGV 180

Query: 181 RSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIG 240
           RS+HPRAFV+CSTTELSDEVFQMAKFIS Y+QLKTA+DNG GQL LQ GASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGQLELQNGASDVSIGLLIG 240

Query: 241 TPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVKHSTSRYCNQKCQS 300
           TP EVSE IE+GSVV DEIKYLVLDELD MFDLGFGP+IKKILTSVK STSR+CNQKCQS
Sbjct: 241 TPNEVSELIEDGSVVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 VVVTSTLIKMLHEQHSSLVESLKHGDAGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAV 360
           VVVTSTLIKMLHEQHSSLVESLK  D GEIAAMLLEIEEEEAFHLMESPDTLKCKLA+AV
Sbjct: 301 VVVTSTLIKMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

Query: 361 ESLHASTQRT 371
           ESL  ST RT
Sbjct: 361 ESLRVSTNRT 366

[Close]

BLAST of Lcy09g007770 vs. ExPASy TrEMBL
Match: A0A6J1JT03 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita maxima OX=3661 GN=LOC111487576 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 8.3e-157
Identity = 302/370 (81.62%), Postives = 323/370 (87.30%), Query Frame = 0


Query: 1   MGSRRKALLELSHCASSLLCPTKRSISPNPTFSTNTLLASRLFSSSFSRNSTDGTALEND 60
           MGSRRKALLELSH  +SL CPTKRS   NP  S N  LASR FSSSFSR S      END
Sbjct: 1   MGSRRKALLELSHYLNSLSCPTKRSSFHNPVISLNAFLASRYFSSSFSRTS----ETEND 60

Query: 61  RPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSSYSAKKGSGNGGEKVMTGFKELGLCNEV 120
           RPP+++R++MLLEKFR RKL+ SS I +ES SS SA KGSGNGGEKVMTGFKELGL NEV
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNGI 180
           AEA E MGFFVPSEL CVGIPALLEGKNVVLGSLYGPERAL YLLPLIQNLKR  K+NG+
Sbjct: 121 AEAAEGMGFFVPSELLCVGIPALLEGKNVVLGSLYGPERALTYLLPLIQNLKRDAKSNGV 180

Query: 181 RSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIG 240
           RS+HPRAFV+CSTTELSDEVFQMAKFIS Y+QLKTA+DNG G+L LQ GASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGKLELQNGASDVSIGLLIG 240

Query: 241 TPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVKHSTSRYCNQKCQS 300
           TP EVSE IE+GS+V DEIKYLVLDELD MFDLGFGP+IKKILTSVK STSR+CNQKCQS
Sbjct: 241 TPNEVSELIEDGSMVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 VVVTSTLIKMLHEQHSSLVESLKHGDAGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAV 360
           VVVTSTLIKMLH+QHSSLVESLK  D GEIAAMLLEIEEEEAFHLMESPDTLKCKLA+AV
Sbjct: 301 VVVTSTLIKMLHKQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

Query: 361 ESLHASTQRT 371
           ESL AST RT
Sbjct: 361 ESLRASTNRT 366

[Close]

BLAST of Lcy09g007770 vs. ExPASy TrEMBL
Match: A0A6J1BZL0 (DEAD-box ATP-dependent RNA helicase 39-like OS=Momordica charantia OX=3673 GN=LOC111006682 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 2.1e-155
Identity = 297/370 (80.27%), Postives = 320/370 (86.49%), Query Frame = 0


Query: 1   MGSRRKALLELSHCASSLLCPTKRSISPNPTFSTNTLLASRLFSSSFSRNSTDGTALEND 60
           MGSR KALLELS  A  LLCPT  S  P P+ ST T L SR++SSSFSR S   TA END
Sbjct: 1   MGSRTKALLELSRRAKLLLCPTNPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60

Query: 61  RPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSSYSAKKGSGNGGEKVMTGFKELGLCNEV 120
           RPPQS+RDSMLLEKFRLRKL+ SSKI QESSSS SA        EKVMTGFKELGLCNEV
Sbjct: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSA--------EKVMTGFKELGLCNEV 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNGI 180
           AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSL GPERALAYLLP IQ+LKR GK N I
Sbjct: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDI 180

Query: 181 RSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIG 240
           RS+HPRAF+LCST ELSDEVFQMAKFIS Y QLK++RDN C QL LQ+G SDVSIG+L+G
Sbjct: 181 RSKHPRAFILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVG 240

Query: 241 TPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVKHSTSRYCNQKCQS 300
           TP EVSE IEEGSVVPDEIKYLVLDELD MFDLGFGP+IKKILTS+ H TSR+CNQKCQS
Sbjct: 241 TPDEVSELIEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQS 300

Query: 301 VVVTSTLIKMLHEQHSSLVESLKHGDAGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAV 360
           VVVTST+IKMLHEQHSSLVESLK  DAGEIAAMLLEI+E+EAFHLMESPDT+KCKLA+AV
Sbjct: 301 VVVTSTMIKMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAV 360

Query: 361 ESLHASTQRT 371
           +SLHAST+ T
Sbjct: 361 KSLHASTKGT 362

[Close]

BLAST of Lcy09g007770 vs. ExPASy TrEMBL
Match: A0A5A7SLY8 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G003970 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.4e-140
Identity = 275/370 (74.32%), Postives = 303/370 (81.89%), Query Frame = 0


Query: 1   MGSRRKALLELSHCASSLLCPTKRSISPNPTFSTNTLLASRLFSSSFSRNSTDGTALEND 60
           MGSRRKALLELSHCA+ LL PTKRSI PN   S N LLAS   SS+FSR+S DGT +END
Sbjct: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFALSANALLASPFCSSTFSRSSADGTPVEND 60

Query: 61  RPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSSYSAKKGSGNGGEKVMTGFKELGLCNEV 120
           +PPQSNRDS LLEKFRLRKL+  SKI Q SSSS        NGGEKVMTGF++LGLCNE+
Sbjct: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSS--------NGGEKVMTGFRQLGLCNEL 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNGI 180
           A AVEEMG   PSEL C  IPA+LEGKNVVLG L GPERALAYLLPLIQNLKR  K  G 
Sbjct: 121 AGAVEEMGILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGT 180

Query: 181 RSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIG 240
           RS+HPRAFV+C T +LS+E+F MAK+IS YRQLKT RDN CG+L LQK ASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIG 240

Query: 241 TPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVKHSTSRYCNQKCQS 300
           TP E+SE IEEGSVV DEI YLV DELD MFDLGFGP+IKKILTSV+H     CN+KC+S
Sbjct: 241 TPDEISELIEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRH-----CNEKCRS 300

Query: 301 VVVTSTLIKMLHEQHSSLVESLKHGDAGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAV 360
           +VVTSTLIKM+HEQ SSLV+SL+ GDAGEIAAM+LEIEEEEAFHLMESPD LK KLA+ V
Sbjct: 301 IVVTSTLIKMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVV 357

Query: 361 ESLHASTQRT 371
           ESL  STQ T
Sbjct: 361 ESLRPSTQET 357

[Close]

BLAST of Lcy09g007770 vs. ExPASy TrEMBL
Match: A0A1S3C4L0 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo OX=3656 GN=LOC103496581 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.4e-140
Identity = 275/370 (74.32%), Postives = 303/370 (81.89%), Query Frame = 0


Query: 1   MGSRRKALLELSHCASSLLCPTKRSISPNPTFSTNTLLASRLFSSSFSRNSTDGTALEND 60
           MGSRRKALLELSHCA+ LL PTKRSI PN   S N LLAS   SS+FSR+S DGT +END
Sbjct: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFALSANALLASPFCSSTFSRSSADGTPVEND 60

Query: 61  RPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSSYSAKKGSGNGGEKVMTGFKELGLCNEV 120
           +PPQSNRDS LLEKFRLRKL+  SKI Q SSSS        NGGEKVMTGF++LGLCNE+
Sbjct: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSS--------NGGEKVMTGFRQLGLCNEL 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNGI 180
           A AVEEMG   PSEL C  IPA+LEGKNVVLG L GPERALAYLLPLIQNLKR  K  G 
Sbjct: 121 AGAVEEMGILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGT 180

Query: 181 RSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIG 240
           RS+HPRAFV+C T +LS+E+F MAK+IS YRQLKT RDN CG+L LQK ASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIG 240

Query: 241 TPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVKHSTSRYCNQKCQS 300
           TP E+SE IEEGSVV DEI YLV DELD MFDLGFGP+IKKILTSV+H     CN+KC+S
Sbjct: 241 TPDEISELIEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRH-----CNEKCRS 300

Query: 301 VVVTSTLIKMLHEQHSSLVESLKHGDAGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAV 360
           +VVTSTLIKM+HEQ SSLV+SL+ GDAGEIAAM+LEIEEEEAFHLMESPD LK KLA+ V
Sbjct: 301 IVVTSTLIKMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVV 357

Query: 361 ESLHASTQRT 371
           ESL  STQ T
Sbjct: 361 ESLRPSTQET 357

[Close]

BLAST of Lcy09g007770 vs. NCBI nr
Match: XP_022959642.1 (DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita moschata])

HSP 1 Score: 570.5 bits (1469), Expect = 1.1e-158
Identity = 305/370 (82.43%), Postives = 324/370 (87.57%), Query Frame = 0


Query: 1   MGSRRKALLELSHCASSLLCPTKRSISPNPTFSTNTLLASRLFSSSFSRNSTDGTALEND 60
           MGSRRKALLEL H  +SL CPTK ++  NP  STN  LASR FSSSFSR  T     END
Sbjct: 1   MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRYFSSSFSRTLT----TEND 60

Query: 61  RPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSSYSAKKGSGNGGEKVMTGFKELGLCNEV 120
           RPP+++R++MLLEKFR RKL+ SS I +ES SS SA KGSGNGGEKVMTGFKELGL NEV
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNGI 180
           AEA E MGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKR  KTNG+
Sbjct: 121 AEAAEGMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGV 180

Query: 181 RSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIG 240
           RS+HPRAFV+CSTTELSDEVFQMAKFIS Y+QLKTA+DNG GQL LQ GASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGQLELQNGASDVSIGLLIG 240

Query: 241 TPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVKHSTSRYCNQKCQS 300
           TP EVSE IE+GSVV DEIKYLVLDELD MFDLGFGP+IKKILTSVK STSR+CNQKCQS
Sbjct: 241 TPNEVSELIEDGSVVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 VVVTSTLIKMLHEQHSSLVESLKHGDAGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAV 360
           VVVTSTLIKMLHEQHSSLVESLK  D GEIAAMLLEIEEEEAFHLMESPDTLKCKLA+AV
Sbjct: 301 VVVTSTLIKMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

Query: 361 ESLHASTQRT 371
           ESL  ST RT
Sbjct: 361 ESLRVSTNRT 366

[Close]

BLAST of Lcy09g007770 vs. NCBI nr
Match: KAG6602207.1 (DEAD-box ATP-dependent RNA helicase 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 569.7 bits (1467), Expect = 1.8e-158
Identity = 306/370 (82.70%), Postives = 324/370 (87.57%), Query Frame = 0


Query: 1   MGSRRKALLELSHCASSLLCPTKRSISPNPTFSTNTLLASRLFSSSFSRNSTDGTALEND 60
           MGSRRKALLEL H  +SL CPTK ++  NP  STN  LASR FS  FSR  T     END
Sbjct: 1   MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFT----TEND 60

Query: 61  RPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSSYSAKKGSGNGGEKVMTGFKELGLCNEV 120
           RPP+++R++MLLEKFR RKL+ SS I +ES SS SA KGSGNGGEKVMTGFKELGL NEV
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNGI 180
           AEAVE MGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKR  KTNG+
Sbjct: 121 AEAVEGMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGV 180

Query: 181 RSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIG 240
           RS+HPRAFV+CSTTELSDEVFQMAKFIS YRQLKTA+DNG GQL LQ GASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIG 240

Query: 241 TPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVKHSTSRYCNQKCQS 300
           TP EVSE IE+GSVV DEIKYLVLDELD MFDLGFGP+IKKILTSVK STSR+CNQKCQS
Sbjct: 241 TPNEVSELIEDGSVVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 VVVTSTLIKMLHEQHSSLVESLKHGDAGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAV 360
           VVVTSTLIKMLHEQHSSLVESLK  D GEIAAMLLEIEEEEAFHLMESPDTLKCKLA+AV
Sbjct: 301 VVVTSTLIKMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

Query: 361 ESLHASTQRT 371
           ESL AST RT
Sbjct: 361 ESLRASTNRT 366

[Close]

BLAST of Lcy09g007770 vs. NCBI nr
Match: XP_038886391.1 (DEAD-box ATP-dependent RNA helicase 39-like [Benincasa hispida])

HSP 1 Score: 565.8 bits (1457), Expect = 2.7e-157
Identity = 300/370 (81.08%), Postives = 322/370 (87.03%), Query Frame = 0


Query: 1   MGSRRKALLELSHCASSLLCPTKRSISPNPTFSTNTLLASRLFSSSFSRNSTDGTALEND 60
           MGSRRKAL ELSH A+SLLCPTKRS  PN T S N  LASRL SS+FSR STDGTA+END
Sbjct: 1   MGSRRKALFELSHYANSLLCPTKRSTFPNLTLSRNAFLASRLHSSAFSRTSTDGTAMEND 60

Query: 61  RPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSSYSAKKGSGNGGEKVMTGFKELGLCNEV 120
           +PPQSNRD+MLLEKFRLRKL+ SSK+ QESSS+      S N GEKV+TGFKELGLCNE+
Sbjct: 61  QPPQSNRDAMLLEKFRLRKLKGSSKVSQESSST------SSNRGEKVITGFKELGLCNEL 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNGI 180
           AEAVEEMG F PSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKR GK  G+
Sbjct: 121 AEAVEEMGIFAPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDGKKYGV 180

Query: 181 RSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIG 240
           RS+HPRAFVLCS+ ELSDEVFQMAKFIS YRQL TARDNGC +L LQK ASD+SIGLLIG
Sbjct: 181 RSKHPRAFVLCSSVELSDEVFQMAKFISNYRQLATARDNGCIELELQKSASDISIGLLIG 240

Query: 241 TPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVKHSTSRYCNQKCQS 300
           TP E+ + IEEGSVVPDEI YLVLDELD MFDLGFGP+IK ILTSV+H     CN+KCQS
Sbjct: 241 TPGEILKLIEEGSVVPDEINYLVLDELDSMFDLGFGPNIKDILTSVRH-----CNEKCQS 300

Query: 301 VVVTSTLIKMLHEQHSSLVESLKHGDAGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAV 360
           VV+TST IKMLHEQHSSLVESLK GD GEIAAMLLEIEEEEAFHLMESPDTLKCKLA+ V
Sbjct: 301 VVLTSTFIKMLHEQHSSLVESLKRGDTGEIAAMLLEIEEEEAFHLMESPDTLKCKLADVV 359

Query: 361 ESLHASTQRT 371
           ESL ASTQRT
Sbjct: 361 ESLCASTQRT 359

[Close]

BLAST of Lcy09g007770 vs. NCBI nr
Match: XP_022990794.1 (DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita maxima])

HSP 1 Score: 563.1 bits (1450), Expect = 1.7e-156
Identity = 302/370 (81.62%), Postives = 323/370 (87.30%), Query Frame = 0


Query: 1   MGSRRKALLELSHCASSLLCPTKRSISPNPTFSTNTLLASRLFSSSFSRNSTDGTALEND 60
           MGSRRKALLELSH  +SL CPTKRS   NP  S N  LASR FSSSFSR S      END
Sbjct: 1   MGSRRKALLELSHYLNSLSCPTKRSSFHNPVISLNAFLASRYFSSSFSRTS----ETEND 60

Query: 61  RPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSSYSAKKGSGNGGEKVMTGFKELGLCNEV 120
           RPP+++R++MLLEKFR RKL+ SS I +ES SS SA KGSGNGGEKVMTGFKELGL NEV
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNGI 180
           AEA E MGFFVPSEL CVGIPALLEGKNVVLGSLYGPERAL YLLPLIQNLKR  K+NG+
Sbjct: 121 AEAAEGMGFFVPSELLCVGIPALLEGKNVVLGSLYGPERALTYLLPLIQNLKRDAKSNGV 180

Query: 181 RSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIG 240
           RS+HPRAFV+CSTTELSDEVFQMAKFIS Y+QLKTA+DNG G+L LQ GASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGKLELQNGASDVSIGLLIG 240

Query: 241 TPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVKHSTSRYCNQKCQS 300
           TP EVSE IE+GS+V DEIKYLVLDELD MFDLGFGP+IKKILTSVK STSR+CNQKCQS
Sbjct: 241 TPNEVSELIEDGSMVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 VVVTSTLIKMLHEQHSSLVESLKHGDAGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAV 360
           VVVTSTLIKMLH+QHSSLVESLK  D GEIAAMLLEIEEEEAFHLMESPDTLKCKLA+AV
Sbjct: 301 VVVTSTLIKMLHKQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

Query: 361 ESLHASTQRT 371
           ESL AST RT
Sbjct: 361 ESLRASTNRT 366

[Close]

BLAST of Lcy09g007770 vs. NCBI nr
Match: XP_022134432.1 (DEAD-box ATP-dependent RNA helicase 39-like [Momordica charantia])

HSP 1 Score: 558.5 bits (1438), Expect = 4.2e-155
Identity = 297/370 (80.27%), Postives = 320/370 (86.49%), Query Frame = 0


Query: 1   MGSRRKALLELSHCASSLLCPTKRSISPNPTFSTNTLLASRLFSSSFSRNSTDGTALEND 60
           MGSR KALLELS  A  LLCPT  S  P P+ ST T L SR++SSSFSR S   TA END
Sbjct: 1   MGSRTKALLELSRRAKLLLCPTNPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60

Query: 61  RPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSSYSAKKGSGNGGEKVMTGFKELGLCNEV 120
           RPPQS+RDSMLLEKFRLRKL+ SSKI QESSSS SA        EKVMTGFKELGLCNEV
Sbjct: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSA--------EKVMTGFKELGLCNEV 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNGI 180
           AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSL GPERALAYLLP IQ+LKR GK N I
Sbjct: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDI 180

Query: 181 RSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIG 240
           RS+HPRAF+LCST ELSDEVFQMAKFIS Y QLK++RDN C QL LQ+G SDVSIG+L+G
Sbjct: 181 RSKHPRAFILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVG 240

Query: 241 TPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVKHSTSRYCNQKCQS 300
           TP EVSE IEEGSVVPDEIKYLVLDELD MFDLGFGP+IKKILTS+ H TSR+CNQKCQS
Sbjct: 241 TPDEVSELIEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQS 300

Query: 301 VVVTSTLIKMLHEQHSSLVESLKHGDAGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAV 360
           VVVTST+IKMLHEQHSSLVESLK  DAGEIAAMLLEI+E+EAFHLMESPDT+KCKLA+AV
Sbjct: 301 VVVTSTMIKMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAV 360

Query: 361 ESLHASTQRT 371
           +SLHAST+ T
Sbjct: 361 KSLHASTKGT 362

[Close]

BLAST of Lcy09g007770 vs. TAIR 10
Match: AT4G09730.1 (RH39 )

HSP 1 Score: 175.6 bits (444), Expect = 7.2e-44
Identity = 101/284 (35.56%), Postives = 169/284 (59.51%), Query Frame = 0


Query: 46  SFSRNSTDGTALENDRPPQSNRDSMLLEKFRLRKLRVSSKIPQESSSS---YSAKKGSGN 105
           S +  ++  T   N   P   + ++LLE+ RLR L+ S+K PQ+  SS      +     
Sbjct: 46  SAAATTSSPTTETNVTDPDQLKHTILLERLRLRHLKESAKPPQQRPSSVVGVEEESSIRK 105

Query: 106 GGEKVMTGFKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALA 165
             +K++  F+ELGL  EV  A++E+   VP+E+ C+GIPA++E K+VVLGS  G  + LA
Sbjct: 106 KSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLA 165

Query: 166 YLLPLIQNLKRVGKTNG--IRSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNG 225
           YLLP++Q ++      G   + + PR  VLC T ELS++V+++AK IS + + ++   +G
Sbjct: 166 YLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSG 225

Query: 226 CGQLGLQKGASDVSIGLLIGTPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIK 285
             ++  Q+ + + +I +++GTP  + + IEEG++V  +I YLVLDE D MFD GFGP I+
Sbjct: 226 GSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIR 285

Query: 286 KILTSVKHSTSRYCNQKCQSVVVTSTLIKMLHEQHSSLVESLKH 325
           K L  +     +  +Q  Q+V+VT+T+   + +      + ++H
Sbjct: 286 KFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEH 329

[Close]

BLAST of Lcy09g007770 vs. TAIR 10
Match: AT5G14610.2 (DEAD box RNA helicase family protein )

HSP 1 Score: 85.5 bits (210), Expect = 9.8e-17
Identity = 55/196 (28.06%), Postives = 91/196 (46.43%), Query Frame = 0


Query: 100 SGNGGEKVMTGFKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPER 159
           SG      +  F+  GL NE+   V   GF  PS +     P  ++ +++V  +  G  +
Sbjct: 152 SGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGK 211

Query: 160 ALAYLLPLIQNLKRVGKTNGIRSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDN 219
            L YL+P   +L+R+   +      P   VL  T EL+ ++   A    K  ++  A   
Sbjct: 212 TLGYLIPGFMHLQRIHNDS---RMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLY 271

Query: 220 GCGQLGLQKGASDVSIGLLIGTPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSI 279
           G    G Q    +  + +++ TP  +++ +E   +   ++ YLVLDE D M D+GF P I
Sbjct: 272 GGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQI 331

Query: 280 KKILTSV--KHSTSRY 294
           +KI+  V  K  T  Y
Sbjct: 332 RKIVNEVPTKRQTLMY 344

[Close]

BLAST of Lcy09g007770 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 84.3 bits (207), Expect = 2.2e-16
Identity = 51/182 (28.02%), Postives = 91/182 (50.00%), Query Frame = 0


Query: 106 KVMTGFKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLL 165
           K +  F+++G  + V E V++ GF  P+ +   G P  ++G++++  +  G  + L+YLL
Sbjct: 96  KPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLL 155

Query: 166 PLIQNLKRVGKTNGIRSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLG 225
           P I ++    +        P   VL  T EL+ ++ Q A       ++KT    G    G
Sbjct: 156 PAIVHVN--AQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKG 215

Query: 226 LQKGASDVSIGLLIGTPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTS 285
            Q       + ++I TP  + + +E  +     + YLVLDE D M D+GF P I+KI++ 
Sbjct: 216 PQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSH 275

Query: 286 VK 288
           ++
Sbjct: 276 IR 275

[Close]

BLAST of Lcy09g007770 vs. TAIR 10
Match: AT2G42520.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 4.9e-16
Identity = 50/187 (26.74%), Postives = 90/187 (48.13%), Query Frame = 0


Query: 100 SGNGGEKVMTGFKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPER 159
           SG+     +  F E+ L   +   +    +  P+ +    IP LLEG++++  +  G  +
Sbjct: 150 SGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGK 209

Query: 160 ALAYLLPLIQNL---KRVGKTNGIRSQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTA 219
             A+  P+I  +   + V +  G R+ +P A +L  T EL+ ++   AK  S    +K  
Sbjct: 210 TAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVV 269

Query: 220 RDNGCGQLGLQKGASDVSIGLLIGTPAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFG 279
              G   +  Q    +  + +L+ TP  +++ +E   V    I++L LDE D M D+GF 
Sbjct: 270 VAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFE 329

Query: 280 PSIKKIL 284
           P I+KI+
Sbjct: 330 PQIRKIV 336

[Close]

BLAST of Lcy09g007770 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 3.2e-15
Identity = 53/226 (23.45%), Postives = 110/226 (48.67%), Query Frame = 0


Query: 65  SNRDSMLLEKFRLRKLRVSSKIPQESSSSYSAKKG---SGNGGEKVMTGFKELGLCNEVA 124
           S+ D   + K    +L   S + ++ ++ Y  + G   SG    + +  F++ G  +++ 
Sbjct: 181 SSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIM 240

Query: 125 EAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRVGKTNGIR 184
            A+++  +  P+ + C  +P +L G++V+  +  G  +  A++LP+I ++  + +    R
Sbjct: 241 SAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHI--MDQPELQR 300

Query: 185 SQHPRAFVLCSTTELSDEVFQMAKFISKYRQLKTARDNGCGQLGLQKGASDVSIGLLIGT 244
            + P   +   T EL+ ++F  AK  SK   L+ +   G      Q         +++ T
Sbjct: 301 DEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVAT 360

Query: 245 PAEVSEFIEEGSVVPDEIKYLVLDELDMMFDLGFGPSIKKILTSVK 288
           P  + + ++  ++      YLVLDE D MFDLGF P ++ I+  ++
Sbjct: 361 PGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIR 404

The following BLAST results are available for this feature:

BLAST of Lcy09g007770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5VRY0	2.7e-43	35.18	DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q56X76	1.0e-42	35.56	DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 P...	[more]
A1SAL1	1.5e-17	29.67	ATP-dependent RNA helicase RhlB OS=Shewanella amazonensis (strain ATCC BAA-1098 ...	[more]
A5UDI1	2.5e-17	32.37	ATP-dependent RNA helicase RhlB OS=Haemophilus influenzae (strain PittEE) OX=374...	[more]
Q8TDD1	3.3e-17	28.30	ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2	[more]

BLAST of Lcy09g007770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H541	5.2e-159	82.43	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JT03	8.3e-157	81.62	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1BZL0	2.1e-155	80.27	DEAD-box ATP-dependent RNA helicase 39-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A5A7SLY8	1.4e-140	74.32	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C4L0	1.4e-140	74.32	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo OX=3656 GN=LOC103496...	[more]

BLAST of Lcy09g007770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959642.1	1.1e-158	82.43	DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita moschata]	[more]
KAG6602207.1	1.8e-158	82.70	DEAD-box ATP-dependent RNA helicase 39, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_038886391.1	2.7e-157	81.08	DEAD-box ATP-dependent RNA helicase 39-like [Benincasa hispida]	[more]
XP_022990794.1	1.7e-156	81.62	DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita maxima]	[more]
XP_022134432.1	4.2e-155	80.27	DEAD-box ATP-dependent RNA helicase 39-like [Momordica charantia]	[more]

BLAST of Lcy09g007770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09730.1	7.2e-44	35.56	RH39	[more]
AT5G14610.2	9.8e-17	28.06	DEAD box RNA helicase family protein	[more]
AT1G55150.1	2.2e-16	28.02	DEA(D/H)-box RNA helicase family protein	[more]
AT2G42520.1	4.9e-16	26.74	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G47330.1	3.2e-15	23.45	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein	SMART	SM00517	poly_2	coord: 303..366 e-value: 6.7E-4 score: 17.8
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 128..340 e-value: 0.0028 score: 22.9
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 140..325 score: 16.431814
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 140..309 e-value: 3.5E-18 score: 66.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 74..322 e-value: 3.5E-34 score: 120.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 106..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..103
None	No IPR available	PANTHER	PTHR24031:SF694	DEAD-BOX ATP-DEPENDENT RNA HELICASE 39-LIKE ISOFORM X1	coord: 77..366
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 77..366
IPR036053	PABC (PABP) domain	SUPERFAMILY	63570	PABC (PABP) domain	coord: 310..365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g007770.1	Lcy09g007770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902775	mitochondrial large ribosomal subunit assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding