Lcy09g007330 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g007330
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	SHSP domain-containing protein
Location	Chr09: 6571128 .. 6571858 (+)
RNA-Seq Expression	Lcy09g007330
Synteny	Lcy09g007330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCAAAGCTATAGCCATCTACCTCATTATTCAGTATTGGATCGAAGCACACGTTCAAGAAGAAATTACCATTCTCTCATATTTTCTCCTCATTTTTCCTTCTTTCAGACAAAAGTTAGAAAAAAAATTTCAATGTCGAGTCAGATCGTGAGACGAACTGAATGGAGAAACATTACTCAATCGAAGCAACCGTTTTCTCCAAAGCATGAATGGAATGAAAATGACAAGAGTTGGACGTTGACCATGAAACTTGAAGGTAAAATTAACTAGATTTCCTTTATATATATATATATATATATAAGTGGTAAAAGTAATTACTTCCATTCATTTTGTTTAGGTTTTTCAAAGGATCAAGTGCGAATCACCTTGATGGAAGGAATAAAGACTCTTTTAGTTACAGGACAAAAACAAGATGGCTTTAATGTCACTCGTTTGAATGAGCGCATACCAATTAAATCTAACTGCTCATTAAATGATGTTTCTGCAAACATGTCTGAAGAAACTCTTTCGGTTACCTTCCGCAAAATAGATAACAAATAAACCTTTATTTCCATCTAAATCAAGATTTACTTTTGTAATGAATAAATATCAACTTCTATATGTATGACGGAGTTGGTGTAAGAAATATATGTTTCTATAATTATTGTAATCAAATTCAGTGTTAATGATGATATTATTGTGTACTTCGAAATTTCAATGTTTAATATCAACCAACTTATGTTGTGTGCCTA

mRNA sequence

ACCCAAAGCTATAGCCATCTACCTCATTATTCAGTATTGGATCGAAGCACACGTTCAAGAAGAAATTACCATTCTCTCATATTTTCTCCTCATTTTTCCTTCTTTCAGACAAAAGTTAGAAAAAAAATTTCAATGTCGAGTCAGATCGTGAGACGAACTGAATGGAGAAACATTACTCAATCGAAGCAACCGTTTTCTCCAAAGCATGAATGGAATGAAAATGACAAGAGTTGGACGTTGACCATGAAACTTGAAGGTTTTTCAAAGGATCAAGTGCGAATCACCTTGATGGAAGGAATAAAGACTCTTTTAGTTACAGGACAAAAACAAGATGGCTTTAATGTCACTCGTTTGAATGAGCGCATACCAATTAAATCTAACTGCTCATTAAATGATGTTTCTGCAAACATGTCTGAAGAAACTCTTTCGGTTACCTTCCGCAAAATAGATAACAAATAAACCTTTATTTCCATCTAAATCAAGATTTACTTTTGTAATGAATAAATATCAACTTCTATATGTATGACGGAGTTGGTGTAAGAAATATATGTTTCTATAATTATTGTAATCAAATTCAGTGTTAATGATGATATTATTGTGTACTTCGAAATTTCAATGTTTAATATCAACCAACTTATGTTGTGTGCCTA

Coding sequence (CDS)

ATGTCGAGTCAGATCGTGAGACGAACTGAATGGAGAAACATTACTCAATCGAAGCAACCGTTTTCTCCAAAGCATGAATGGAATGAAAATGACAAGAGTTGGACGTTGACCATGAAACTTGAAGGTTTTTCAAAGGATCAAGTGCGAATCACCTTGATGGAAGGAATAAAGACTCTTTTAGTTACAGGACAAAAACAAGATGGCTTTAATGTCACTCGTTTGAATGAGCGCATACCAATTAAATCTAACTGCTCATTAAATGATGTTTCTGCAAACATGTCTGAAGAAACTCTTTCGGTTACCTTCCGCAAAATAGATAACAAATAA

Protein sequence

MSSQIVRRTEWRNITQSKQPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLLVTGQKQDGFNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRKIDNK

Homology

[Close]

BLAST of Lcy09g007330 vs. ExPASy Swiss-Prot
Match: D9UBX6 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.4e-05
Identity = 24/87 (27.59%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 19  QPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLLVTGQKQ-DGFNVTRLNER 78
           + F PK EW +  ++  L + L GF+K+Q+++T +   K + VTG++       +R NE 
Sbjct: 17  EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEV 76

Query: 79  IPIKSNCSLNDVSANMSEETLSVTFRK 105
             +  NC ++ +  +     L++T  K
Sbjct: 77  FTVPQNCLVDKIHGSFKNNVLTITMPK 103

[Close]

BLAST of Lcy09g007330 vs. ExPASy Swiss-Prot
Match: D9UBX4 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.4e-05
Identity = 24/87 (27.59%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 19  QPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLLVTGQKQ-DGFNVTRLNER 78
           + F PK EW +  ++  L + L GF+K+Q+++T +   K + VTG++       +R NE 
Sbjct: 17  EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEV 76

Query: 79  IPIKSNCSLNDVSANMSEETLSVTFRK 105
             +  NC ++ +  +     L++T  K
Sbjct: 77  FTVPQNCLVDKIHGSFKNNVLTITMPK 103

[Close]

BLAST of Lcy09g007330 vs. ExPASy Swiss-Prot
Match: D9UC01 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.4e-05
Identity = 24/87 (27.59%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 19  QPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLLVTGQKQ-DGFNVTRLNER 78
           + F PK EW +  ++  L + L GF+K+Q+++T +   K + VTG++        R NE 
Sbjct: 17  EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWNRFNEV 76

Query: 79  IPIKSNCSLNDVSANMSEETLSVTFRK 105
             +  NC ++ +  +  +  L++T  K
Sbjct: 77  FTVPQNCLVDKIHGSFKKNVLTITMPK 103

[Close]

BLAST of Lcy09g007330 vs. ExPASy Swiss-Prot
Match: Q9M670 (Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.4e-05
Identity = 24/87 (27.59%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 19  QPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLLVTGQKQ-DGFNVTRLNER 78
           + F PK EW +  ++  L + L GF+K+Q+++T +   K + VTG++       +R NE 
Sbjct: 17  EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEV 76

Query: 79  IPIKSNCSLNDVSANMSEETLSVTFRK 105
             +  NC ++ +  +     L++T  K
Sbjct: 77  FTVPQNCLVDKIHGSFKNNVLTITMPK 103

[Close]

BLAST of Lcy09g007330 vs. ExPASy Swiss-Prot
Match: D5K211 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.9e-05
Identity = 24/87 (27.59%), Postives = 45/87 (51.72%), Query Frame = 0


Query: 19  QPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLLVTGQKQ-DGFNVTRLNER 78
           + F PK EW +  ++  L + L GF+K+Q+++T +   K + VTG++        R NE 
Sbjct: 17  EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWNRFNEV 76

Query: 79  IPIKSNCSLNDVSANMSEETLSVTFRK 105
             +  NC ++ +  +     L++T  K
Sbjct: 77  FTVPQNCLVDKIHGSFKNNVLTITMPK 103

[Close]

BLAST of Lcy09g007330 vs. ExPASy TrEMBL
Match: A0A6J1FGX8 (uncharacterized protein LOC111445297 OS=Cucurbita moschata OX=3662 GN=LOC111445297 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.1e-20
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 1   MSSQIVRRTEWRNITQSKQPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLL 60
           MSSQIV + +W ++T+S QPFSP  +W E + S  L+MKL GF K+Q++ITL    +TL 
Sbjct: 1   MSSQIVEQ-DWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLT 60

Query: 61  VTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK 105
           VTGQKQDG FN+ RLNERI I   CSL+ V A + ++TL VTF K
Sbjct: 61  VTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSK 104

[Close]

BLAST of Lcy09g007330 vs. ExPASy TrEMBL
Match: A0A0A0KB53 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046370 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17
Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 1   MSSQIVRRTEWRN-ITQSKQPFSPK--HEWNENDKSWTLTMKLEGFSKDQVRITLMEGIK 60
           MSSQIV + +WRN +TQ  Q F P    E +E    W+ +MKL GFSKD++RI L    +
Sbjct: 1   MSSQIVNQ-DWRNVVTQQNQQFFPSITFEESEEKNKWSFSMKLPGFSKDRLRINLNTRTR 60

Query: 61  TLLVTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK 105
            ++VTGQK DG FN+TRLNER+ IK +C L  V A +S +TL VTF K
Sbjct: 61  IIVVTGQKSDGLFNITRLNERVTIKEDCLLEGVQAKLSNDTLIVTFEK 107

[Close]

BLAST of Lcy09g007330 vs. ExPASy TrEMBL
Match: A0A3P6D0V5 (SHSP domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC2T06177H PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.7e-06
Identity = 29/85 (34.12%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 21  FSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLLVTGQKQDGFNV-TRLNERIP 80
           F PK EW +   +  LT+ L GF+++QV++T +   K L VTG++  G+   +R NE   
Sbjct: 11  FVPKSEWKDQPDATILTIDLPGFTREQVKVTFVHASKMLRVTGERPLGYRKWSRFNEMFT 70

Query: 81  IKSNCSLNDVSANMSEETLSVTFRK 105
           +  NC ++ +  + S  TL++T  K
Sbjct: 71  VPRNCLVDKIHGSFSFNTLTITMPK 95

[Close]

BLAST of Lcy09g007330 vs. ExPASy TrEMBL
Match: A0A5C7GXC0 (SHSP domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_025106 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.3e-05
Identity = 30/91 (32.97%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 15  TQSKQPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLLVTGQKQDGFNV-TR 74
           T   + + P  EW E  +++TLT+ L  F+K+Q++IT ++  + + V G ++   N  +R
Sbjct: 7   TGDDEVYKPTSEWKEELENYTLTVHLPDFTKEQIKITCVKSSRMVRVHGDRKLANNKWSR 66

Query: 75  LNERIPIKSNCSLNDVSANMSEETLSVTFRK 105
            NE  PI  NC ++ + A    E+L VT  K
Sbjct: 67  FNEAFPIPDNCKIDKIHAKWHNESLIVTMPK 97

[Close]

BLAST of Lcy09g007330 vs. ExPASy TrEMBL
Match: A0A067ECS7 (SHSP domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035730mg PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.7e-05
Identity = 30/87 (34.48%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 19  QPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLLVTGQKQDGFNV-TRLNER 78
           + F P  EW +  ++  L + L  F+K+Q+RIT +   + + VTG++Q G N  +R N+ 
Sbjct: 17  EDFHPMSEWLDEPENNILLVHLPDFTKEQIRITCVRSSRIVRVTGERQLGDNKWSRCNQA 76

Query: 79  IPIKSNCSLNDVSANMSEETLSVTFRK 105
            PI SNC ++ + A  +   L+VT  K
Sbjct: 77  FPIPSNCKIDKIHAKWNNAILTVTMPK 103

[Close]

BLAST of Lcy09g007330 vs. NCBI nr
Match: KAG7016359.1 (hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-19
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 1   MSSQIVRRTEWRNITQSKQPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLL 60
           MSSQIV + +WR++T+S QPFSP  +W E + S  L+MKL GF K++++ITL    +TL 
Sbjct: 1   MSSQIVEQ-DWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLT 60

Query: 61  VTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK 105
           VTGQKQDG FN+ RLNERI I   CSL+ V A + + TL VTF K
Sbjct: 61  VTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSK 104

[Close]

BLAST of Lcy09g007330 vs. NCBI nr
Match: XP_022939359.1 (uncharacterized protein LOC111445297 [Cucurbita moschata])

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-19
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 1   MSSQIVRRTEWRNITQSKQPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLL 60
           MSSQIV + +W ++T+S QPFSP  +W E + S  L+MKL GF K+Q++ITL    +TL 
Sbjct: 1   MSSQIVEQ-DWGDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNQLQITLNAATRTLT 60

Query: 61  VTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK 105
           VTGQKQDG FN+ RLNERI I   CSL+ V A + ++TL VTF K
Sbjct: 61  VTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDQTLFVTFSK 104

[Close]

BLAST of Lcy09g007330 vs. NCBI nr
Match: KAE8646641.1 (hypothetical protein Csa_005322 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 6.0e-17
Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 1   MSSQIVRRTEWRN-ITQSKQPFSPK--HEWNENDKSWTLTMKLEGFSKDQVRITLMEGIK 60
           MSSQIV + +WRN +TQ  Q F P    E +E    W+ +MKL GFSKD++RI L    +
Sbjct: 44  MSSQIVNQ-DWRNVVTQQNQQFFPSITFEESEEKNKWSFSMKLPGFSKDRLRINLNTRTR 103

Query: 61  TLLVTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK 105
            ++VTGQK DG FN+TRLNER+ IK +C L  V A +S +TL VTF K
Sbjct: 104 IIVVTGQKSDGLFNITRLNERVTIKEDCLLEGVQAKLSNDTLIVTFEK 150

[Close]

BLAST of Lcy09g007330 vs. NCBI nr
Match: KAG6578833.1 (Chlorophyll(ide) b reductase NOL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.8 bits (177), Expect = 2.1e-09
Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 0


Query: 1  MSSQIVRRTEWRNITQSKQPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLL 60
          MSSQIV + +WR++T+S QPFSP  +W E + S  L+MKL GF K++++ITL    +TL 
Sbjct: 1  MSSQIVEQ-DWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLT 60

Query: 61 VTGQKQD 68
          VTGQKQD
Sbjct: 61 VTGQKQD 66

[Close]

BLAST of Lcy09g007330 vs. NCBI nr
Match: KAG6602241.1 (hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.5 bits (158), Expect = 3.3e-07
Identity = 32/101 (31.68%), Postives = 58/101 (57.43%), Query Frame = 0


Query: 11  WRNITQSKQPFSPKHEWNE----NDKSWTLTMKLEGFSKDQVRITLMEGIKTLLVTGQKQ 70
           W  + Q K+ + P  EW E    N   + + +   G S++Q++I++   ++T+ +   K+
Sbjct: 8   WDEMDQQKENYRPNVEWKERKETNKDYFEMIIDFSGCSRNQLQISMSRELRTIDIMTTKK 67

Query: 71  DGFNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRKIDN 108
           +G+N+ R+NE IPI+  CSL++V A+     L +TF K  N
Sbjct: 68  EGYNIARVNETIPIRPECSLDNVYASFVNNDLIITFPKKTN 108

[Close]

BLAST of Lcy09g007330 vs. TAIR 10
Match: AT5G04890.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06
Identity = 24/87 (27.59%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 19  QPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLLVTGQKQ-DGFNVTRLNER 78
           + F PK EW +  ++  L + L GF+K+Q+++T +   K + VTG++       +R NE 
Sbjct: 17  EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEV 76

Query: 79  IPIKSNCSLNDVSANMSEETLSVTFRK 105
             +  NC ++ +  +     L++T  K
Sbjct: 77  FTVPQNCLVDKIHGSFKNNVLTITMPK 103

The following BLAST results are available for this feature:

BLAST of Lcy09g007330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D9UBX6	1.4e-05	27.59	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
D9UBX4	1.4e-05	27.59	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
D9UC01	1.4e-05	27.59	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
Q9M670	1.4e-05	27.59	Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 S...	[more]
D5K211	1.9e-05	27.59	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]

BLAST of Lcy09g007330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGX8	8.1e-20	55.24	uncharacterized protein LOC111445297 OS=Cucurbita moschata OX=3662 GN=LOC1114452...	[more]
A0A0A0KB53	2.9e-17	51.85	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046370 PE=3 S...	[more]
A0A3P6D0V5	8.7e-06	34.12	SHSP domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC2T06177H PE=3...	[more]
A0A5C7GXC0	4.3e-05	32.97	SHSP domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_025106 PE=...	[more]
A0A067ECS7	5.7e-05	34.48	SHSP domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035730mg PE...	[more]

BLAST of Lcy09g007330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016359.1	1.3e-19	55.24	hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022939359.1	1.7e-19	55.24	uncharacterized protein LOC111445297 [Cucurbita moschata]	[more]
KAE8646641.1	6.0e-17	51.85	hypothetical protein Csa_005322 [Cucumis sativus]	[more]
KAG6578833.1	2.1e-09	55.22	Chlorophyll(ide) b reductase NOL, chloroplastic, partial [Cucurbita argyrosperma...	[more]
KAG6602241.1	3.3e-07	31.68	hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lcy09g007330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04890.1	1.0e-06	27.59	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 16..105 e-value: 5.3E-12 score: 47.5
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 18..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	CDD	cd00298	ACD_sHsps_p23-like	coord: 27..104 e-value: 2.07931E-6 score: 40.2651
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 16..108 score: 13.886683

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g007330.1	Lcy09g007330.1	mRNA