
Lcy09g007330 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCCAAAGCTATAGCCATCTACCTCATTATTCAGTATTGGATCGAAGCACACGTTCAAGAAGAAATTACCATTCTCTCATATTTTCTCCTCATTTTTCCTTCTTTCAGACAAAAGTTAGAAAAAAAATTTCAATGTCGAGTCAGATCGTGAGACGAACTGAATGGAGAAACATTACTCAATCGAAGCAACCGTTTTCTCCAAAGCATGAATGGAATGAAAATGACAAGAGTTGGACGTTGACCATGAAACTTGAAGGTAAAATTAACTAGATTTCCTTTATATATATATATATATATATAAGTGGTAAAAGTAATTACTTCCATTCATTTTGTTTAGGTTTTTCAAAGGATCAAGTGCGAATCACCTTGATGGAAGGAATAAAGACTCTTTTAGTTACAGGACAAAAACAAGATGGCTTTAATGTCACTCGTTTGAATGAGCGCATACCAATTAAATCTAACTGCTCATTAAATGATGTTTCTGCAAACATGTCTGAAGAAACTCTTTCGGTTACCTTCCGCAAAATAGATAACAAATAAACCTTTATTTCCATCTAAATCAAGATTTACTTTTGTAATGAATAAATATCAACTTCTATATGTATGACGGAGTTGGTGTAAGAAATATATGTTTCTATAATTATTGTAATCAAATTCAGTGTTAATGATGATATTATTGTGTACTTCGAAATTTCAATGTTTAATATCAACCAACTTATGTTGTGTGCCTA ACCCAAAGCTATAGCCATCTACCTCATTATTCAGTATTGGATCGAAGCACACGTTCAAGAAGAAATTACCATTCTCTCATATTTTCTCCTCATTTTTCCTTCTTTCAGACAAAAGTTAGAAAAAAAATTTCAATGTCGAGTCAGATCGTGAGACGAACTGAATGGAGAAACATTACTCAATCGAAGCAACCGTTTTCTCCAAAGCATGAATGGAATGAAAATGACAAGAGTTGGACGTTGACCATGAAACTTGAAGGTTTTTCAAAGGATCAAGTGCGAATCACCTTGATGGAAGGAATAAAGACTCTTTTAGTTACAGGACAAAAACAAGATGGCTTTAATGTCACTCGTTTGAATGAGCGCATACCAATTAAATCTAACTGCTCATTAAATGATGTTTCTGCAAACATGTCTGAAGAAACTCTTTCGGTTACCTTCCGCAAAATAGATAACAAATAAACCTTTATTTCCATCTAAATCAAGATTTACTTTTGTAATGAATAAATATCAACTTCTATATGTATGACGGAGTTGGTGTAAGAAATATATGTTTCTATAATTATTGTAATCAAATTCAGTGTTAATGATGATATTATTGTGTACTTCGAAATTTCAATGTTTAATATCAACCAACTTATGTTGTGTGCCTA ATGTCGAGTCAGATCGTGAGACGAACTGAATGGAGAAACATTACTCAATCGAAGCAACCGTTTTCTCCAAAGCATGAATGGAATGAAAATGACAAGAGTTGGACGTTGACCATGAAACTTGAAGGTTTTTCAAAGGATCAAGTGCGAATCACCTTGATGGAAGGAATAAAGACTCTTTTAGTTACAGGACAAAAACAAGATGGCTTTAATGTCACTCGTTTGAATGAGCGCATACCAATTAAATCTAACTGCTCATTAAATGATGTTTCTGCAAACATGTCTGAAGAAACTCTTTCGGTTACCTTCCGCAAAATAGATAACAAATAA MSSQIVRRTEWRNITQSKQPFSPKHEWNENDKSWTLTMKLEGFSKDQVRITLMEGIKTLLVTGQKQDGFNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRKIDNK Homology
BLAST of Lcy09g007330 vs. ExPASy Swiss-Prot
Match: D9UBX6 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.4e-05 Identity = 24/87 (27.59%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Lcy09g007330 vs. ExPASy Swiss-Prot
Match: D9UBX4 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.4e-05 Identity = 24/87 (27.59%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Lcy09g007330 vs. ExPASy Swiss-Prot
Match: D9UC01 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.4e-05 Identity = 24/87 (27.59%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Lcy09g007330 vs. ExPASy Swiss-Prot
Match: Q9M670 (Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.4e-05 Identity = 24/87 (27.59%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Lcy09g007330 vs. ExPASy Swiss-Prot
Match: D5K211 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.9e-05 Identity = 24/87 (27.59%), Postives = 45/87 (51.72%), Query Frame = 0
BLAST of Lcy09g007330 vs. ExPASy TrEMBL
Match: A0A6J1FGX8 (uncharacterized protein LOC111445297 OS=Cucurbita moschata OX=3662 GN=LOC111445297 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 8.1e-20 Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0
BLAST of Lcy09g007330 vs. ExPASy TrEMBL
Match: A0A0A0KB53 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046370 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17 Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 0
BLAST of Lcy09g007330 vs. ExPASy TrEMBL
Match: A0A3P6D0V5 (SHSP domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC2T06177H PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 8.7e-06 Identity = 29/85 (34.12%), Postives = 49/85 (57.65%), Query Frame = 0
BLAST of Lcy09g007330 vs. ExPASy TrEMBL
Match: A0A5C7GXC0 (SHSP domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_025106 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 4.3e-05 Identity = 30/91 (32.97%), Postives = 51/91 (56.04%), Query Frame = 0
BLAST of Lcy09g007330 vs. ExPASy TrEMBL
Match: A0A067ECS7 (SHSP domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035730mg PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 5.7e-05 Identity = 30/87 (34.48%), Postives = 50/87 (57.47%), Query Frame = 0
BLAST of Lcy09g007330 vs. NCBI nr
Match: KAG7016359.1 (hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 106.7 bits (265), Expect = 1.3e-19 Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0
BLAST of Lcy09g007330 vs. NCBI nr
Match: XP_022939359.1 (uncharacterized protein LOC111445297 [Cucurbita moschata]) HSP 1 Score: 106.3 bits (264), Expect = 1.7e-19 Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0
BLAST of Lcy09g007330 vs. NCBI nr
Match: KAE8646641.1 (hypothetical protein Csa_005322 [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 6.0e-17 Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 0
BLAST of Lcy09g007330 vs. NCBI nr
Match: KAG6578833.1 (Chlorophyll(ide) b reductase NOL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 72.8 bits (177), Expect = 2.1e-09 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of Lcy09g007330 vs. NCBI nr
Match: KAG6602241.1 (hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 65.5 bits (158), Expect = 3.3e-07 Identity = 32/101 (31.68%), Postives = 58/101 (57.43%), Query Frame = 0
BLAST of Lcy09g007330 vs. TAIR 10
Match: AT5G04890.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06 Identity = 24/87 (27.59%), Postives = 46/87 (52.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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