Lcy09g007260 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g007260
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein GL2-INTERACTING REPRESSOR 2
Location	Chr09: 6509545 .. 6510577 (+)
RNA-Seq Expression	Lcy09g007260
Synteny	Lcy09g007260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAAAATCTCAGGAAACCACTCAATATCTGGAGCATGCTGGTGATGTAAACGATTACGGTGGTGGAGACCTAGAGAGCCATGTTCGTAGCCCTGAGGAGTTCTCCTTGAGCGTGGATCAACTCAATCAAGACTTTGACAAATCTCTTGTTCTTAAAAGTTCGTCGGCTTATTCATCCCCAATTGAATTAAAGGATAGTTCTAATCTAACTATGAAGCAATCAGAAGTTCCTGATAAGGTATAATTCTTCTTCAACTTGTAAATATCATGATTTGTGTTGGATTTTTTTCCTTAAATGATTTTGGTAATCTTGTTTTGATCTTGTTATATTTTCGCTTACTAGGAAGATTATGATCTCTTTCGTTTGCCCAAATAAATCTTTTAGCCTATTAAGGAAAAATCTACACATAATCTAGGCATATTTAGGTGAATGCTAATATATTTCTTATTTCTTGTGGGTTCTGGAAACAAATTCCAAAAGAAGGAAACTAAAAGAAGGTATGTTACAGAAATGGGAACGACTCCTAATGAAAATGATGCATATTTGGATCTCAAACTGTCACCTCCAGGGGTCTACTTAAGGGTTAAATCATCAAATGAATCCAAATCATCATCCCCAAGATCTCAAGACTCGTGCGTATCTGCTGAGGTCGAGTCAAATGCGAACTTGGAGAATAACCTTCGAGTTGAGCGCTCGCCCTTGATTGTGATGGGATGTACTTTTTGCCTGCTCTTCGTGATGGTGACAGATGCAGATCCCAGATGCCCTAAATGCAAAAATTCTGGCTTGCTCGACGTTTTCCGTGGAAATCAGGCGAAGAGATCGAGAAAGAATTAGTTTTCTTTCAAGGAGTTTACATGTTGGCTGGCTTCAAATGCCCCAGTATGCTCTTGAACTGATGCACCCTCTGCTTTTTTCTTAGTGTCTTAAACTCTCCTTCCTTGTTGCTGATGCTGCTGCTGCAGCACCACTATCATTTTACTTGGGGAGTCAGAATAGCATCTTCAATAAACAAATATAGTTTCTG

mRNA sequence

ATGGCTTCAAAATCTCAGGAAACCACTCAATATCTGGAGCATGCTGGTGATGTAAACGATTACGGTGGTGGAGACCTAGAGAGCCATGTTCGTAGCCCTGAGGAGTTCTCCTTGAGCGTGGATCAACTCAATCAAGACTTTGACAAATCTCTTGTTCTTAAAAGTTCGTCGGCTTATTCATCCCCAATTGAATTAAAGGATAGTTCTAATCTAACTATGAAGCAATCAGAAGTTCCTGATAAGAAGGAAACTAAAAGAAGGTATGTTACAGAAATGGGAACGACTCCTAATGAAAATGATGCATATTTGGATCTCAAACTGTCACCTCCAGGGGTCTACTTAAGGGTTAAATCATCAAATGAATCCAAATCATCATCCCCAAGATCTCAAGACTCGTGCGTATCTGCTGAGGTCGAGTCAAATGCGAACTTGGAGAATAACCTTCGAGTTGAGCGCTCGCCCTTGATTGTGATGGGATGTACTTTTTGCCTGCTCTTCGTGATGGTGACAGATGCAGATCCCAGATGCCCTAAATGCAAAAATTCTGGCTTGCTCGACGTTTTCCGTGGAAATCAGGCGAAGAGATCGAGAAAGAATTAGTTTTCTTTCAAGGAGTTTACATGTTGGCTGGCTTCAAATGCCCCAGTATGCTCTTGAACTGATGCACCCTCTGCTTTTTTCTTAGTGTCTTAAACTCTCCTTCCTTGTTGCTGATGCTGCTGCTGCAGCACCACTATCATTTTACTTGGGGAGTCAGAATAGCATCTTCAATAAACAAATATAGTTTCTG

Coding sequence (CDS)

ATGGCTTCAAAATCTCAGGAAACCACTCAATATCTGGAGCATGCTGGTGATGTAAACGATTACGGTGGTGGAGACCTAGAGAGCCATGTTCGTAGCCCTGAGGAGTTCTCCTTGAGCGTGGATCAACTCAATCAAGACTTTGACAAATCTCTTGTTCTTAAAAGTTCGTCGGCTTATTCATCCCCAATTGAATTAAAGGATAGTTCTAATCTAACTATGAAGCAATCAGAAGTTCCTGATAAGAAGGAAACTAAAAGAAGGTATGTTACAGAAATGGGAACGACTCCTAATGAAAATGATGCATATTTGGATCTCAAACTGTCACCTCCAGGGGTCTACTTAAGGGTTAAATCATCAAATGAATCCAAATCATCATCCCCAAGATCTCAAGACTCGTGCGTATCTGCTGAGGTCGAGTCAAATGCGAACTTGGAGAATAACCTTCGAGTTGAGCGCTCGCCCTTGATTGTGATGGGATGTACTTTTTGCCTGCTCTTCGTGATGGTGACAGATGCAGATCCCAGATGCCCTAAATGCAAAAATTCTGGCTTGCTCGACGTTTTCCGTGGAAATCAGGCGAAGAGATCGAGAAAGAATTAG

Protein sequence

MASKSQETTQYLEHAGDVNDYGGGDLESHVRSPEEFSLSVDQLNQDFDKSLVLKSSSAYSSPIELKDSSNLTMKQSEVPDKKETKRRYVTEMGTTPNENDAYLDLKLSPPGVYLRVKSSNESKSSSPRSQDSCVSAEVESNANLENNLRVERSPLIVMGCTFCLLFVMVTDADPRCPKCKNSGLLDVFRGNQAKRSRKN

Homology

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BLAST of Lcy09g007260 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.8e-09
Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 103 LDLKLSPPGVYLR--VKSSNESKSSSPRS-QDSCVSAEVESNANLENNLRVERSP----L 162
           L L LSPP    R  V+S + S ++SP S   SCVS+E+  +   E ++R   SP    +
Sbjct: 10  LKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQD---EPSVRYSTSPETTSM 69

Query: 163 IVMGCTFCLLFVMVTDADPRCPKCKNSGLLDVFRGN 192
           +++GC  CL++VM+++ DP+CPKCK++ LLD    N
Sbjct: 70  VLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN 102

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BLAST of Lcy09g007260 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.9e-09
Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 97  NENDAYLDLK--LSPP----GVYLRVKSSNESKSSSPRSQDSCVSAEVESNANLENNLRV 156
           N+N   L+L+  LSPP         V+S N S ++SP    SCVS+E     N E N  +
Sbjct: 5   NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSP---SSCVSSE----TNQEENETI 64

Query: 157 ERSPLIVMGCTFCLLFVMVTDADPRCPKCKNSGLLDVFRGN 192
             + ++++GC  CL++VM++D DP+CPKCK++ LLD  + N
Sbjct: 65  --TSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQEN 96

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BLAST of Lcy09g007260 vs. ExPASy TrEMBL
Match: A0A6J1FLG8 (uncharacterized protein LOC111445310 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445310 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.4e-78
Identity = 162/195 (83.08%), Postives = 172/195 (88.21%), Query Frame = 0


Query: 6   QETTQYLEHAGDVND-YGGGDLESHVRSPEEFSLSVDQLNQDFDKSLVLKSSSAYSSPIE 65
           QETTQYLE +GD  D  GGGDLES + SPEEFS SVDQLNQ+F+KSLVLKSSS+ SSPIE
Sbjct: 52  QETTQYLESSGDAKDCAGGGDLES-LCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPIE 111

Query: 66  LKDSSNLTMKQSEVPDKKETKRRYVTEMGTTPNENDAYLDLKLSPPGVYLRVKSSNESKS 125
           +KDSS L+MKQSEV DKKETKRRY   MGTT NEN AYLDLKLSPPGVYLR KSSNESKS
Sbjct: 112 VKDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNESKS 171

Query: 126 SSPRSQDSCVSAEVESNANLENNLRVERSPLIVMGCTFCLLFVMVTDADPRCPKCKNSGL 185
           SSP+SQDSCVSAEVESN NLENNL VE SPLIVMGCTFCLL+VMVTD DPRCP CKNSGL
Sbjct: 172 SSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNSGL 231

Query: 186 LDVFRGNQAKRSRKN 200
           LD+FRGNQ KRSRKN
Sbjct: 232 LDIFRGNQPKRSRKN 245

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BLAST of Lcy09g007260 vs. ExPASy TrEMBL
Match: A0A6J1FGZ2 (uncharacterized protein LOC111445310 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445310 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.4e-78
Identity = 162/195 (83.08%), Postives = 172/195 (88.21%), Query Frame = 0


Query: 6   QETTQYLEHAGDVND-YGGGDLESHVRSPEEFSLSVDQLNQDFDKSLVLKSSSAYSSPIE 65
           QETTQYLE +GD  D  GGGDLES + SPEEFS SVDQLNQ+F+KSLVLKSSS+ SSPIE
Sbjct: 45  QETTQYLESSGDAKDCAGGGDLES-LCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPIE 104

Query: 66  LKDSSNLTMKQSEVPDKKETKRRYVTEMGTTPNENDAYLDLKLSPPGVYLRVKSSNESKS 125
           +KDSS L+MKQSEV DKKETKRRY   MGTT NEN AYLDLKLSPPGVYLR KSSNESKS
Sbjct: 105 VKDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNESKS 164

Query: 126 SSPRSQDSCVSAEVESNANLENNLRVERSPLIVMGCTFCLLFVMVTDADPRCPKCKNSGL 185
           SSP+SQDSCVSAEVESN NLENNL VE SPLIVMGCTFCLL+VMVTD DPRCP CKNSGL
Sbjct: 165 SSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNSGL 224

Query: 186 LDVFRGNQAKRSRKN 200
           LD+FRGNQ KRSRKN
Sbjct: 225 LDIFRGNQPKRSRKN 238

[Close]

BLAST of Lcy09g007260 vs. ExPASy TrEMBL
Match: A0A6J1FMI8 (uncharacterized protein LOC111445310 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445310 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.6e-77
Identity = 162/197 (82.23%), Postives = 172/197 (87.31%), Query Frame = 0


Query: 4   KSQETTQYLEHAGDVND-YGGGDLESHVRSPEEFSLSVDQLNQDFDKSLVLKSSSAYSSP 63
           K  ETTQYLE +GD  D  GGGDLES + SPEEFS SVDQLNQ+F+KSLVLKSSS+ SSP
Sbjct: 40  KFLETTQYLESSGDAKDCAGGGDLES-LCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSP 99

Query: 64  IELKDSSNLTMKQSEVPDKKETKRRYVTEMGTTPNENDAYLDLKLSPPGVYLRVKSSNES 123
           IE+KDSS L+MKQSEV DKKETKRRY   MGTT NEN AYLDLKLSPPGVYLR KSSNES
Sbjct: 100 IEVKDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNES 159

Query: 124 KSSSPRSQDSCVSAEVESNANLENNLRVERSPLIVMGCTFCLLFVMVTDADPRCPKCKNS 183
           KSSSP+SQDSCVSAEVESN NLENNL VE SPLIVMGCTFCLL+VMVTD DPRCP CKNS
Sbjct: 160 KSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNS 219

Query: 184 GLLDVFRGNQAKRSRKN 200
           GLLD+FRGNQ KRSRKN
Sbjct: 220 GLLDIFRGNQPKRSRKN 235

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BLAST of Lcy09g007260 vs. ExPASy TrEMBL
Match: A0A6J1FFQ0 (uncharacterized protein LOC111445310 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111445310 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.6e-77
Identity = 162/197 (82.23%), Postives = 172/197 (87.31%), Query Frame = 0


Query: 4   KSQETTQYLEHAGDVND-YGGGDLESHVRSPEEFSLSVDQLNQDFDKSLVLKSSSAYSSP 63
           K  ETTQYLE +GD  D  GGGDLES + SPEEFS SVDQLNQ+F+KSLVLKSSS+ SSP
Sbjct: 33  KFLETTQYLESSGDAKDCAGGGDLES-LCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSP 92

Query: 64  IELKDSSNLTMKQSEVPDKKETKRRYVTEMGTTPNENDAYLDLKLSPPGVYLRVKSSNES 123
           IE+KDSS L+MKQSEV DKKETKRRY   MGTT NEN AYLDLKLSPPGVYLR KSSNES
Sbjct: 93  IEVKDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNES 152

Query: 124 KSSSPRSQDSCVSAEVESNANLENNLRVERSPLIVMGCTFCLLFVMVTDADPRCPKCKNS 183
           KSSSP+SQDSCVSAEVESN NLENNL VE SPLIVMGCTFCLL+VMVTD DPRCP CKNS
Sbjct: 153 KSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNS 212

Query: 184 GLLDVFRGNQAKRSRKN 200
           GLLD+FRGNQ KRSRKN
Sbjct: 213 GLLDIFRGNQPKRSRKN 228

[Close]

BLAST of Lcy09g007260 vs. ExPASy TrEMBL
Match: A0A6J1FGM1 (uncharacterized protein LOC111445310 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111445310 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.1e-77
Identity = 161/194 (82.99%), Postives = 171/194 (88.14%), Query Frame = 0


Query: 7   ETTQYLEHAGDVND-YGGGDLESHVRSPEEFSLSVDQLNQDFDKSLVLKSSSAYSSPIEL 66
           ETTQYLE +GD  D  GGGDLES + SPEEFS SVDQLNQ+F+KSLVLKSSS+ SSPIE+
Sbjct: 9   ETTQYLESSGDAKDCAGGGDLES-LCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPIEV 68

Query: 67  KDSSNLTMKQSEVPDKKETKRRYVTEMGTTPNENDAYLDLKLSPPGVYLRVKSSNESKSS 126
           KDSS L+MKQSEV DKKETKRRY   MGTT NEN AYLDLKLSPPGVYLR KSSNESKSS
Sbjct: 69  KDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNESKSS 128

Query: 127 SPRSQDSCVSAEVESNANLENNLRVERSPLIVMGCTFCLLFVMVTDADPRCPKCKNSGLL 186
           SP+SQDSCVSAEVESN NLENNL VE SPLIVMGCTFCLL+VMVTD DPRCP CKNSGLL
Sbjct: 129 SPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNSGLL 188

Query: 187 DVFRGNQAKRSRKN 200
           D+FRGNQ KRSRKN
Sbjct: 189 DIFRGNQPKRSRKN 201

[Close]

BLAST of Lcy09g007260 vs. NCBI nr
Match: XP_038885898.1 (uncharacterized protein LOC120076204 [Benincasa hispida])

HSP 1 Score: 311.2 bits (796), Expect = 6.3e-81
Identity = 165/194 (85.05%), Postives = 171/194 (88.14%), Query Frame = 0


Query: 7   ETTQYLEHAGDVNDYGGGDLESHVRSPEEFSLSVDQLNQDFDKSLVLKSSSAYSSPIELK 66
           ETTQYLEHAGD  D GG DLES  RSPE+FSLSVDQLNQDF+KSLVLK+SS+    IELK
Sbjct: 84  ETTQYLEHAGDAKDCGGDDLESCARSPEDFSLSVDQLNQDFNKSLVLKNSSS----IELK 143

Query: 67  DSSNLTMKQSEVPDKKETKRRYVTEMGTTPNENDAYLDLKLSPPGVYLRVKSSNESKSSS 126
           DSSNLTMKQSEVPDKKETKRRY  EMGT  NENDAYLDLKLSPPGVY R K SNESKSSS
Sbjct: 144 DSSNLTMKQSEVPDKKETKRRYAVEMGTAANENDAYLDLKLSPPGVYSRGKLSNESKSSS 203

Query: 127 PRSQDSCVSAEVESNANLE-NNLRVERSPLIVMGCTFCLLFVMVTDADPRCPKCKNSGLL 186
           PRSQDSC+SAEVESN N E NNLRVE SPLIVMGCTFCLL+VMVTDADPRCPKCKN GLL
Sbjct: 204 PRSQDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGLL 263

Query: 187 DVFRGNQAKRSRKN 200
           DVFRGNQ KRSRKN
Sbjct: 264 DVFRGNQVKRSRKN 273

[Close]

BLAST of Lcy09g007260 vs. NCBI nr
Match: KAG6578827.1 (hypothetical protein SDJN03_23275, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.4 bits (781), Expect = 3.5e-79
Identity = 165/200 (82.50%), Postives = 175/200 (87.50%), Query Frame = 0


Query: 1   MASKSQETTQYLEHAGDVND-YGGGDLESHVRSPEEFSLSVDQLNQDFDKSLVLKSSSAY 60
           M SK QETTQYLE +GD  D  GGGDLES + SPEEFS SVDQLNQ+F+KSLVLKSSS+ 
Sbjct: 1   MGSKPQETTQYLESSGDAKDCAGGGDLES-LCSPEEFSSSVDQLNQNFNKSLVLKSSSSR 60

Query: 61  SSPIELKDSSNLTMKQSEVPDKKETKRRYVTEMGTTPNENDAYLDLKLSPPGVYLRVKSS 120
           SSPIE+KDSS L+MKQSEV DKKETKRRY   MGTT NEN AYLDLKLSPPGVYLR KSS
Sbjct: 61  SSPIEVKDSSKLSMKQSEVTDKKETKRRYAPGMGTTGNENYAYLDLKLSPPGVYLRGKSS 120

Query: 121 NESKSSSPRSQDSCVSAEVESNANLENNLRVERSPLIVMGCTFCLLFVMVTDADPRCPKC 180
           NESKSSSP+SQDSCVSAEVESN NLENNL VE SPLIVMGCTFCLL+VMVTD DPRCP C
Sbjct: 121 NESKSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPIC 180

Query: 181 KNSGLLDVFRGNQAKRSRKN 200
           KNSGLLD+FRGNQ KRSRKN
Sbjct: 181 KNSGLLDIFRGNQPKRSRKN 199

[Close]

BLAST of Lcy09g007260 vs. NCBI nr
Match: XP_022939372.1 (uncharacterized protein LOC111445310 isoform X1 [Cucurbita moschata] >XP_022939373.1 uncharacterized protein LOC111445310 isoform X1 [Cucurbita moschata])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 162/195 (83.08%), Postives = 172/195 (88.21%), Query Frame = 0


Query: 6   QETTQYLEHAGDVND-YGGGDLESHVRSPEEFSLSVDQLNQDFDKSLVLKSSSAYSSPIE 65
           QETTQYLE +GD  D  GGGDLES + SPEEFS SVDQLNQ+F+KSLVLKSSS+ SSPIE
Sbjct: 52  QETTQYLESSGDAKDCAGGGDLES-LCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPIE 111

Query: 66  LKDSSNLTMKQSEVPDKKETKRRYVTEMGTTPNENDAYLDLKLSPPGVYLRVKSSNESKS 125
           +KDSS L+MKQSEV DKKETKRRY   MGTT NEN AYLDLKLSPPGVYLR KSSNESKS
Sbjct: 112 VKDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNESKS 171

Query: 126 SSPRSQDSCVSAEVESNANLENNLRVERSPLIVMGCTFCLLFVMVTDADPRCPKCKNSGL 185
           SSP+SQDSCVSAEVESN NLENNL VE SPLIVMGCTFCLL+VMVTD DPRCP CKNSGL
Sbjct: 172 SSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNSGL 231

Query: 186 LDVFRGNQAKRSRKN 200
           LD+FRGNQ KRSRKN
Sbjct: 232 LDIFRGNQPKRSRKN 245

[Close]

BLAST of Lcy09g007260 vs. NCBI nr
Match: XP_022939374.1 (uncharacterized protein LOC111445310 isoform X2 [Cucurbita moschata])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 162/195 (83.08%), Postives = 172/195 (88.21%), Query Frame = 0


Query: 6   QETTQYLEHAGDVND-YGGGDLESHVRSPEEFSLSVDQLNQDFDKSLVLKSSSAYSSPIE 65
           QETTQYLE +GD  D  GGGDLES + SPEEFS SVDQLNQ+F+KSLVLKSSS+ SSPIE
Sbjct: 45  QETTQYLESSGDAKDCAGGGDLES-LCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPIE 104

Query: 66  LKDSSNLTMKQSEVPDKKETKRRYVTEMGTTPNENDAYLDLKLSPPGVYLRVKSSNESKS 125
           +KDSS L+MKQSEV DKKETKRRY   MGTT NEN AYLDLKLSPPGVYLR KSSNESKS
Sbjct: 105 VKDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNESKS 164

Query: 126 SSPRSQDSCVSAEVESNANLENNLRVERSPLIVMGCTFCLLFVMVTDADPRCPKCKNSGL 185
           SSP+SQDSCVSAEVESN NLENNL VE SPLIVMGCTFCLL+VMVTD DPRCP CKNSGL
Sbjct: 165 SSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNSGL 224

Query: 186 LDVFRGNQAKRSRKN 200
           LD+FRGNQ KRSRKN
Sbjct: 225 LDIFRGNQPKRSRKN 238

[Close]

BLAST of Lcy09g007260 vs. NCBI nr
Match: KAG7016354.1 (hypothetical protein SDJN02_21462, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.3 bits (765), Expect = 2.5e-77
Identity = 164/200 (82.00%), Postives = 174/200 (87.00%), Query Frame = 0


Query: 1   MASKSQETTQYLEHAGDVND-YGGGDLESHVRSPEEFSLSVDQLNQDFDKSLVLKSSSAY 60
           M SK QETTQYLE +GD  D  GGGDLES + SPEEFS SVDQLNQ+F+KSLVLKSSS+ 
Sbjct: 141 MGSKPQETTQYLESSGDAKDCAGGGDLES-LCSPEEFSSSVDQLNQNFNKSLVLKSSSSC 200

Query: 61  SSPIELKDSSNLTMKQSEVPDKKETKRRYVTEMGTTPNENDAYLDLKLSPPGVYLRVKSS 120
           SSPIE+KDSS L+MKQSEV D KETKRRY   MGTT NEN AYLDLKLSPPGVYLR KSS
Sbjct: 201 SSPIEVKDSSKLSMKQSEVTD-KETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSS 260

Query: 121 NESKSSSPRSQDSCVSAEVESNANLENNLRVERSPLIVMGCTFCLLFVMVTDADPRCPKC 180
           NESKSSSP+SQDSCVSAEVESN NLENNL VE SPLIVMGCTFCLL+VMVTD DPRCP C
Sbjct: 261 NESKSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPIC 320

Query: 181 KNSGLLDVFRGNQAKRSRKN 200
           KNSGLLD+FRGNQ KRSRKN
Sbjct: 321 KNSGLLDIFRGNQPKRSRKN 338

[Close]

BLAST of Lcy09g007260 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10
Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 103 LDLKLSPPGVYLR--VKSSNESKSSSPRS-QDSCVSAEVESNANLENNLRVERSP----L 162
           L L LSPP    R  V+S + S ++SP S   SCVS+E+  +   E ++R   SP    +
Sbjct: 10  LKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQD---EPSVRYSTSPETTSM 69

Query: 163 IVMGCTFCLLFVMVTDADPRCPKCKNSGLLDVFRGN 192
           +++GC  CL++VM+++ DP+CPKCK++ LLD    N
Sbjct: 70  VLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN 102

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BLAST of Lcy09g007260 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-10
Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 97  NENDAYLDLK--LSPP----GVYLRVKSSNESKSSSPRSQDSCVSAEVESNANLENNLRV 156
           N+N   L+L+  LSPP         V+S N S ++SP    SCVS+E     N E N  +
Sbjct: 5   NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSP---SSCVSSE----TNQEENETI 64

Query: 157 ERSPLIVMGCTFCLLFVMVTDADPRCPKCKNSGLLDVFRGN 192
             + ++++GC  CL++VM++D DP+CPKCK++ LLD  + N
Sbjct: 65  --TSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQEN 96

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BLAST of Lcy09g007260 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.3e-04
Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 124 SSSPRSQDSCVSAEVESNANLENN-LRVERSP-LIVMGCTFCLLFVMVTDADPRCPKCKN 183
           S +  SQ+SC++   E    + ++ +  E +P ++VMGC  C+++VMV     RCPKCK 
Sbjct: 34  SDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCPKCKC 93

Query: 184 SGLL 186
           + L+
Sbjct: 94  TDLI 97

The following BLAST results are available for this feature:

BLAST of Lcy09g007260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	1.8e-09	40.63	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	3.9e-09	39.60	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]

BLAST of Lcy09g007260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FLG8	5.4e-78	83.08	uncharacterized protein LOC111445310 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FGZ2	5.4e-78	83.08	uncharacterized protein LOC111445310 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FMI8	1.6e-77	82.23	uncharacterized protein LOC111445310 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FFQ0	1.6e-77	82.23	uncharacterized protein LOC111445310 isoform X4 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FGM1	2.1e-77	82.99	uncharacterized protein LOC111445310 isoform X5 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Lcy09g007260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885898.1	6.3e-81	85.05	uncharacterized protein LOC120076204 [Benincasa hispida]	[more]
KAG6578827.1	3.5e-79	82.50	hypothetical protein SDJN03_23275, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022939372.1	1.1e-77	83.08	uncharacterized protein LOC111445310 isoform X1 [Cucurbita moschata] >XP_0229393...	[more]
XP_022939374.1	1.1e-77	83.08	uncharacterized protein LOC111445310 isoform X2 [Cucurbita moschata]	[more]
KAG7016354.1	2.5e-77	82.00	hypothetical protein SDJN02_21462, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lcy09g007260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	1.3e-10	40.63	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	2.8e-10	39.60	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT3G52561.1	2.3e-04	35.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR33177:SF51	GB\|AAF02129.1	coord: 97..197
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 97..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g007260.1	Lcy09g007260.1	mRNA