Lcy09g006240 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g006240
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	tetraspanin-6-like
Location	Chr09: 5396818 .. 5399302 (+)
RNA-Seq Expression	Lcy09g006240
Synteny	Lcy09g006240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGCCCCTTTCTGCAAAATCAAAAAATTTTCCCTCCATTTAAAAAGAAAAAGAAATCTCCCACAAAACCCAAAATCCAGAGCGATGAACAAATTAAGCAACTCAGTGATCGGACTCCTCAACTTCCTGACGCTCCTAGCCTCAATTCCGATCATCGGCGGCGCCCTGTGGCTGGCTCGGAACAGCACAACGTGCGAGGCGTTTCTCCAGACGCCGCTGCTGGTGGTGGGCTTCGTGGTGCTCGTCATTTCGCTGGCGGGCTTCGTAGGCGCCTGTTTCAACGTGGCTTGGGCGCTCTGGCTCTATCTGTTCGTCATGTTGCTGCTCATTGCCACGCTCTTGGGCCTCACGGTGTTTGGGCTCGTCGTGGCCAGTAAGGGCGGCGGCGGCGGCGAAGAACGGCTTGGGGATTATTCGATTTGGTTAAGGAACAGAGTGAATGATCCTCGGAATTGGGTGACTATAAGGAGCTGTATTTTGGGGTCTAATACTTGCAATCAGGTTTCTTCTTGGACTCCTTTGAATTATTTGCAGAGAGATATCACTCCCATTCAGGTACTCTGTTTTTCTCTCATTCCACTCTTTCAAATTTAATTCATGTTTTTTTTAGCAGTTTTTAATAGATTGTTCTAATAAATTTTGGTGGTGGGTGACCAAAGAGTTTCGATACCACTGACATAAAATTGATCGAAAGGTTCGAATCTGTCAGGATGGATTGTGGGTGTAAATTTGAGGTGAAAATAATTATTTGTTAAATTTTCTAAAAGAAGATTAGTTCTAAGATATGATGAATTGTTGAATCTTTTGAAAGAAGATTTAGTTCAAGTTAAGATTAAAGGAAAAAAGGTAAATTGTGATTAAATCAATTTGTCTCCTTGTTACTCTGAAAAGTCGTACCTATAGTACAAGAACACTCATTTAAGGATAGAATTTCTTACACCTTGGAGAAGAAAAAAAAAAGGGTTAAAATATCATTTTGGTCTACTTTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTCATTTTAGTCCATATACTTTGATGATTTTGTCCATCTACTTTCAATAAAACTTAAAATTTGATCCTTGTGATTAGTTTATTGTTAACTTTTTTTTTCCTGAAAATTATTATTATTTAACCAATTTCGATAAAAATTAACTTCAAACTACATTAAGGATCAATTTTCAATTTTAAGATTTATTGAGAGTATATAAACTAAATTTAGACATTTGAAAGTACATGCAAAGTGAGATGAAAACCAAAGTACATAGACCAAAATGATATTTTAACAAATCATGATTTGACTGGAAAGATTTATAAATGAATTGAAGGTTTAAATAAGTTTTAAAAAAAAAATTGAAGGTTTAAATATTTTATATATAGTCCAAGATTATTTTCGTTATTGTATTTTCTAGTTCTGCCTACTTATATTAAGATTTTGCAAAACTAGAACTAAAATAAAATATTATCCATTGAATGAATATATTGATATGTATAATTTTTTTTTTTTTTTTTTTTGAGAAACACATCTTGATATGTATAATCAAACATCAAAAGATTTCAAGGAATATATATATATATATCATTAGGTTAATGTTATTTACAGACAAAAAACAAATTATTAAACAAGTTATGCAAAATTATTTATACACAAAAGTGAACATCGGCTTTTAGTGGGTTAACTGGAAATAACAGAGCTAAGTAAAATTTGGGTGCAGTCGGGCTGCTGCAAGCCACCAGCTTCATGCAGCGAGAACGCGCAAGACCCTGATTGCTACCGTTGGAACGGGGCGCCCAATGTCCTGTGCTACGAGTGCAATTCCTGCAAAGCAGGTGTGCTCGAGACTGCAAGAAGGGACTGGCATAAGCTCTCTGTTCTCAACGTCGTGATGCTCATTTTTCTCATCGGCATTTACTCGATCGGTTGCTGTGCATTCCGAAACACCAAACGAGCTGGAGAGGATTACGCTTATGGCGAGAATCGAATGACCAAAATCCGACCCAGATGGGATTACAAGATGTAAGTAATCTAATAACGATTTGAGTTTATTTCACTTTAGTCTTTGAACTACTTTTAAATATTCTAGTTTAAATTGACATTGTTTTAGTCCAGATTTAACAGCTTTCGATTTCACTTTTACTGCTGAGGCAAGCTTTTGTTATACAACTTTTGCTCTTGCAGGAGGAGATGGTTGGAGGACAGGAAGGATCTTTACTGACTGTAGAAATGTCATCTTCTATCAGTCTTTGCTCTTTGGTATCCTAAAGTTAGAAAATTAAGTCGTTTTTCGATTCCAGTGAAAGGGAATGTGTATTTTCAGGGCTTTCTTTTTATGCAGTAATCTTAGGCTACTTTAAAGTACATGATGAAGTCTACTTTTTATCTTATTTTCACACCACTACTTTCTCTTTTGCCTTCTGACTTTGGAAACTAGCCAACATTTAATGCCTACATGTGTAAAGTTTG

mRNA sequence

CCGGCCCCTTTCTGCAAAATCAAAAAATTTTCCCTCCATTTAAAAAGAAAAAGAAATCTCCCACAAAACCCAAAATCCAGAGCGATGAACAAATTAAGCAACTCAGTGATCGGACTCCTCAACTTCCTGACGCTCCTAGCCTCAATTCCGATCATCGGCGGCGCCCTGTGGCTGGCTCGGAACAGCACAACGTGCGAGGCGTTTCTCCAGACGCCGCTGCTGGTGGTGGGCTTCGTGGTGCTCGTCATTTCGCTGGCGGGCTTCGTAGGCGCCTGTTTCAACGTGGCTTGGGCGCTCTGGCTCTATCTGTTCGTCATGTTGCTGCTCATTGCCACGCTCTTGGGCCTCACGGTGTTTGGGCTCGTCGTGGCCAGTAAGGGCGGCGGCGGCGGCGAAGAACGGCTTGGGGATTATTCGATTTGGTTAAGGAACAGAGTGAATGATCCTCGGAATTGGGTGACTATAAGGAGCTGTATTTTGGGGTCTAATACTTGCAATCAGGTTTCTTCTTGGACTCCTTTGAATTATTTGCAGAGAGATATCACTCCCATTCAGTCGGGCTGCTGCAAGCCACCAGCTTCATGCAGCGAGAACGCGCAAGACCCTGATTGCTACCGTTGGAACGGGGCGCCCAATGTCCTGTGCTACGAGTGCAATTCCTGCAAAGCAGGTGTGCTCGAGACTGCAAGAAGGGACTGGCATAAGCTCTCTGTTCTCAACGTCGTGATGCTCATTTTTCTCATCGGCATTTACTCGATCGGTTGCTGTGCATTCCGAAACACCAAACGAGCTGGAGAGGATTACGCTTATGGCGAGAATCGAATGACCAAAATCCGACCCAGATGGGATTACAAGATGAGGAGATGGTTGGAGGACAGGAAGGATCTTTACTGACTGTAGAAATGTCATCTTCTATCAGTCTTTGCTCTTTGGTATCCTAAAGTTAGAAAATTAAGTCGTTTTTCGATTCCAGTGAAAGGGAATGTGTATTTTCAGGGCTTTCTTTTTATGCAGTAATCTTAGGCTACTTTAAAGTACATGATGAAGTCTACTTTTTATCTTATTTTCACACCACTACTTTCTCTTTTGCCTTCTGACTTTGGAAACTAGCCAACATTTAATGCCTACATGTGTAAAGTTTG

Coding sequence (CDS)

ATGAACAAATTAAGCAACTCAGTGATCGGACTCCTCAACTTCCTGACGCTCCTAGCCTCAATTCCGATCATCGGCGGCGCCCTGTGGCTGGCTCGGAACAGCACAACGTGCGAGGCGTTTCTCCAGACGCCGCTGCTGGTGGTGGGCTTCGTGGTGCTCGTCATTTCGCTGGCGGGCTTCGTAGGCGCCTGTTTCAACGTGGCTTGGGCGCTCTGGCTCTATCTGTTCGTCATGTTGCTGCTCATTGCCACGCTCTTGGGCCTCACGGTGTTTGGGCTCGTCGTGGCCAGTAAGGGCGGCGGCGGCGGCGAAGAACGGCTTGGGGATTATTCGATTTGGTTAAGGAACAGAGTGAATGATCCTCGGAATTGGGTGACTATAAGGAGCTGTATTTTGGGGTCTAATACTTGCAATCAGGTTTCTTCTTGGACTCCTTTGAATTATTTGCAGAGAGATATCACTCCCATTCAGTCGGGCTGCTGCAAGCCACCAGCTTCATGCAGCGAGAACGCGCAAGACCCTGATTGCTACCGTTGGAACGGGGCGCCCAATGTCCTGTGCTACGAGTGCAATTCCTGCAAAGCAGGTGTGCTCGAGACTGCAAGAAGGGACTGGCATAAGCTCTCTGTTCTCAACGTCGTGATGCTCATTTTTCTCATCGGCATTTACTCGATCGGTTGCTGTGCATTCCGAAACACCAAACGAGCTGGAGAGGATTACGCTTATGGCGAGAATCGAATGACCAAAATCCGACCCAGATGGGATTACAAGATGAGGAGATGGTTGGAGGACAGGAAGGATCTTTACTGA

Protein sequence

MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGFVGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGGGGEERLGDYSIWLRNRVNDPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENAQDPDCYRWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCAFRNTKRAGEDYAYGENRMTKIRPRWDYKMRRWLEDRKDLY

Homology

[Close]

BLAST of Lcy09g006240 vs. ExPASy Swiss-Prot
Match: Q9C7C1 (Tetraspanin-6 OS=Arabidopsis thaliana OX=3702 GN=TET6 PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.9e-95
Identity = 169/279 (60.57%), Postives = 211/279 (75.63%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           M + SN+VIG+LN LTLLASIPIIG AL+ AR+STTCE FLQTPLLV+GF++L++SLAGF
Sbjct: 1   MYRFSNTVIGVLNLLTLLASIPIIGTALYKARSSTTCENFLQTPLLVIGFIILIVSLAGF 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGG-------GGEERLGDYSIW 120
           +GACFNVAWALW+YL VM+ LIATL+GLT+FGLVV S+GGG         E RLGDY  W
Sbjct: 61  IGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPW 120

Query: 121 LRNRVNDPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENA-- 180
           LR RV DP  W +IRSCIL S TC ++ SWT L+Y QRD+T +QSGCCKPP +C+  A  
Sbjct: 121 LRERVRDPEYWNSIRSCILSSKTCTKIESWTTLDYFQRDMTSVQSGCCKPPTACTYEAGV 180

Query: 181 --QDPDCYRWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCA 240
                DC+RWN    +LCYEC++CKAGVLE  R DW KLSV+N+++L+ LI +Y+ GCCA
Sbjct: 181 VDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYAAGCCA 240

Query: 241 FRNTKRAGEDY-AYGENRMTKIRPRWDYKMRRWLEDRKD 268
           F NT+ A   Y    +NRMT++RPRWDY   RW  ++K+
Sbjct: 241 FHNTRHAAHPYHPSDDNRMTRVRPRWDYYWWRWWHEKKE 279

[Close]

BLAST of Lcy09g006240 vs. ExPASy Swiss-Prot
Match: Q84WF6 (Tetraspanin-5 OS=Arabidopsis thaliana OX=3702 GN=TET5 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.9e-87
Identity = 151/278 (54.32%), Postives = 202/278 (72.66%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           MN++SN+VIG LN LTL++SI ++G ALW+ R+ TTCE FLQ PLL++G  +L++S+AG 
Sbjct: 1   MNRMSNTVIGFLNILTLISSIVLLGSALWMGRSKTTCEHFLQKPLLILGLAILILSVAGL 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGG-------GGEERLGDYSIW 120
           VGAC +VAW LW+YLF M+ +I  L+GLT+FG +V S  GG         E +L  Y  W
Sbjct: 61  VGACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGVVVDGRVYKEFKLEAYHPW 120

Query: 121 LRNRVNDPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENA-- 180
           L+ RV D   WVTI++C+LGS TC++++ WTPL+YLQ+D++P+QSGCCKPP SC  N   
Sbjct: 121 LKTRVVDTNYWVTIKTCLLGSVTCSKLALWTPLDYLQKDLSPLQSGCCKPPTSCVYNTDT 180

Query: 181 ---QDPDCYRWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCC 240
              QDPDCYRWN A  VLCY+C++C+AGVLET RRDWHKLS++NV+++IFLI +Y +GCC
Sbjct: 181 VIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYCVGCC 240

Query: 241 AFRNTKRAGE-DYAYGENRMTKIRPRWDYKMRRWLEDR 266
           AF+N KR     + YG   M+K RP W+    RW   R
Sbjct: 241 AFKNAKRPQHYGFPYGRYGMSKSRPGWEQSWSRWWHGR 278

[Close]

BLAST of Lcy09g006240 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.2e-58
Identity = 111/261 (42.53%), Postives = 165/261 (63.22%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLA-RNSTTCEAFLQTPLLVVGFVVLVISLAG 60
           M + SN+++G+LNFL  L SIPI+ G +WL+ + ST CE FL  P++ +G  ++V+++AG
Sbjct: 1   MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 61  FVGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGGGG-------EERLGDYSI 120
            +G+C  V W LW+YLFVM LLI  +  +TVF  VV +KG G         E +LGDYS 
Sbjct: 61  LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYST 120

Query: 121 WLRNRVNDPRNWVTIRSCILGSNTCNQVSSW---TPLN-YLQRDITPIQSGCCKPPASC- 180
           WL+ RV + +NW  IRSC++ S  C+++ +     P+N + +  +T +QSGCCKP   C 
Sbjct: 121 WLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECG 180

Query: 181 -------------SENAQDPDCYRWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVV 236
                        +    +PDC  W+ A   LC++C SCKAG+L+  +  W K++++N+V
Sbjct: 181 FEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIV 240

[Close]

BLAST of Lcy09g006240 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-56
Identity = 123/280 (43.93%), Postives = 167/280 (59.64%), Query Frame = 0


Query: 3   KLSNSVIGLLNFLTLLASIPIIGGALWLA--RNSTTCEAFLQTPLLVVGFVVLVISLAGF 62
           + SN +IGL+NFLT L SIPI+GG +WL+   NST C  FLQ PL+V+G  ++V+SLAGF
Sbjct: 2   RTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGF 61

Query: 63  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGGGG-------EERLGDYSIW 122
            GAC+   + +WLYL VMLL+IA L+G  +F   V  KG G         +  L DYS W
Sbjct: 62  AGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGW 121

Query: 123 LRNRVNDPRNWVTIRSCILGSNTC-------NQVSSWTPLNYLQRDITPIQSGCCKPPAS 182
           L++RV+D   W  I SC+  S  C       N V     + +L+R ++P++SGCCKPP  
Sbjct: 122 LKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRR-LSPVESGCCKPPTD 181

Query: 183 C-----SENAQD---------PDCYRWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLN 242
           C     +E   D          DC  W+   ++LCY+C+SCKAGVL + ++ W K+SV+N
Sbjct: 182 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 241

Query: 243 VVMLIFLIGIYSIGCCAFRNTKRAGEDYAYGENRMTKIRP 253
           +V+LI L+  Y I   A+RN KR   D   GE RMTK  P
Sbjct: 242 IVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHP 280

[Close]

BLAST of Lcy09g006240 vs. ExPASy Swiss-Prot
Match: Q9LSS4 (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 5.8e-56
Identity = 114/274 (41.61%), Postives = 160/274 (58.39%), Query Frame = 0


Query: 6   NSVIGLLNFLTLLASIPIIGGALWLA--RNSTTCEAFLQTPLLVVGFVVLVISLAGFVGA 65
           +++IGL+NF T L SIPI+GG +WL+   NST C  FLQ PL+++G  ++VISLAG  GA
Sbjct: 5   SNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGA 64

Query: 66  CFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGGGG-------EERLGDYSIWLRN 125
           C+   + +WLYLF M  +IA L+G T+F  VV  KG G         +  L DYS WL++
Sbjct: 65  CYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKD 124

Query: 126 RVNDPRNWVTIRSCILGSNTCNQVS------SWTPLNYLQRDITPIQSGCCKPPASCSEN 185
           RV D   W  I SC+  S  C ++         T   +  R+++P++SGCCKPP  C   
Sbjct: 125 RVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYT 184

Query: 186 --------------AQDPDCYRWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVML 245
                           +PDC  WN    +LCY+C+SCKAGVL + ++ W K+SV+N+V++
Sbjct: 185 YVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVV 244

Query: 246 IFLIGIYSIGCCAFRNTKRAGEDYAYGENRMTKI 251
           I L+  Y I C A++N KR   D   GE RMT +
Sbjct: 245 IILVIFYVIACAAYQNVKRMYNDEPVGEARMTNL 278

[Close]

BLAST of Lcy09g006240 vs. ExPASy TrEMBL
Match: A0A6J1JQ40 (tetraspanin-6-like OS=Cucurbita maxima OX=3661 GN=LOC111487296 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 9.7e-139
Identity = 245/271 (90.41%), Postives = 255/271 (94.10%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           MNKLSNSVIGLLNFLTLLASIPIIGGALW+ARNSTTCE FLQTPLLVVGFVVLVISLAGF
Sbjct: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWMARNSTTCEGFLQTPLLVVGFVVLVISLAGF 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASK--GGGGGEERLGDYSIWLRNRV 120
           VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASK  GGGGGE  LGDYS WLR RV
Sbjct: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGGGGGGEHGLGDYSTWLRKRV 120

Query: 121 NDPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENAQDPDCYR 180
           +DPRNWVTIRSCILGSNTCNQ+ SWTPLNYLQRDI+PIQSGCCKPPASCSEN QDPDCYR
Sbjct: 121 DDPRNWVTIRSCILGSNTCNQLPSWTPLNYLQRDISPIQSGCCKPPASCSENGQDPDCYR 180

Query: 181 WNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCAFRNTKRAGE 240
           WNGAPNVLCYEC+SCKAGVLETAR+DWHKLS+LNVV+LIF I +YSIGCCAFRN KRA E
Sbjct: 181 WNGAPNVLCYECDSCKAGVLETARKDWHKLSILNVVILIFFIVVYSIGCCAFRNAKRAEE 240

Query: 241 DYAYGENRMTKIRPRWDYKMRRWLEDRKDLY 270
           +YAYGENRMTKIRPRWDYKM RWLEDR D Y
Sbjct: 241 NYAYGENRMTKIRPRWDYKMWRWLEDRMDRY 271

[Close]

BLAST of Lcy09g006240 vs. ExPASy TrEMBL
Match: A0A6J1BYK5 (tetraspanin-6-like OS=Momordica charantia OX=3673 GN=LOC111006441 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.5e-136
Identity = 238/268 (88.81%), Postives = 255/268 (95.15%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           MNK SN+VIGLLN LTL+ASIPIIGGALW+ARNSTTCE FLQTPLLV+GFVVL+ISL GF
Sbjct: 1   MNKFSNTVIGLLNLLTLIASIPIIGGALWMARNSTTCEGFLQTPLLVLGFVVLLISLTGF 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGG-GGEERLGDYSIWLRNRVN 120
           VGACFNVAWALWLYLFVMLLLIATLLGLT+FGLVVASKGGG GGE  LGDYS WLR+RV+
Sbjct: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTLFGLVVASKGGGSGGEHGLGDYSEWLRHRVD 120

Query: 121 DPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENAQDPDCYRW 180
           DPRNW+ IRSCILGSNTCN++SSWTPLNYLQRDITPIQSGCC+PPASCSENAQDPDCYRW
Sbjct: 121 DPRNWMAIRSCILGSNTCNKLSSWTPLNYLQRDITPIQSGCCRPPASCSENAQDPDCYRW 180

Query: 181 NGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCAFRNTKRAGED 240
           NGAPNVLCYEC+SCKAGVLETAR DW KLSVLNVVMLIFLIG+YSIGCCAFRNTKRAG D
Sbjct: 181 NGAPNVLCYECDSCKAGVLETARGDWRKLSVLNVVMLIFLIGVYSIGCCAFRNTKRAGAD 240

Query: 241 YAYGENRMTKIRPRWDYKMRRWLEDRKD 268
           Y+YGENRMTKI+PRWDYKM RWLEDRK+
Sbjct: 241 YSYGENRMTKIQPRWDYKMWRWLEDRKE 268

[Close]

BLAST of Lcy09g006240 vs. ExPASy TrEMBL
Match: A0A6J1FM74 (tetraspanin-6-like OS=Cucurbita moschata OX=3662 GN=LOC111445479 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.0e-135
Identity = 235/271 (86.72%), Postives = 254/271 (93.73%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           MNKLSNSVIGLLNFLTLL SIPIIGGALW+ARNSTTCEAFLQTPLLV+GF+VL+ISLAGF
Sbjct: 1   MNKLSNSVIGLLNFLTLLGSIPIIGGALWMARNSTTCEAFLQTPLLVLGFLVLLISLAGF 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGG--GGEERLGDYSIWLRNRV 120
           VGACFNV WALWLYLF MLLLIATLLG T+FGL+VASKGGG  GGE R GDYS+WLRNRV
Sbjct: 61  VGACFNVTWALWLYLFAMLLLIATLLGFTLFGLIVASKGGGGDGGEHRFGDYSVWLRNRV 120

Query: 121 NDPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENAQDPDCYR 180
           N+P+ WVTI+SCILGSNTCNQVSSWTPLNYLQR ITPIQ+GCCKPPASC+EN QDPDCYR
Sbjct: 121 NNPQYWVTIKSCILGSNTCNQVSSWTPLNYLQRQITPIQAGCCKPPASCTENVQDPDCYR 180

Query: 181 WNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCAFRNTKRAGE 240
           WNGAPNVLCY+C SCKAGVLETARRDWHKLSVLN+VMLIFLI +YSIGCCAFRNTKRA  
Sbjct: 181 WNGAPNVLCYDCISCKAGVLETARRDWHKLSVLNIVMLIFLIAVYSIGCCAFRNTKRAQT 240

Query: 241 DYAYGENRMTKIRPRWDYKMRRWLEDRKDLY 270
           DYA+GENRM KI+P WD+KMRRWLEDRK+LY
Sbjct: 241 DYAHGENRMIKIQPTWDHKMRRWLEDRKELY 271

[Close]

BLAST of Lcy09g006240 vs. ExPASy TrEMBL
Match: A0A6J1HAU2 (tetraspanin-6-like OS=Cucurbita moschata OX=3662 GN=LOC111462197 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 239/269 (88.85%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           MNKLSNSVIGLLNFLTLLASIPIIGGALW+ARNSTTCE FLQTPLLVVGFVVLVISLAGF
Sbjct: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWMARNSTTCEGFLQTPLLVVGFVVLVISLAGF 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGGGGEERLGDYSIWLRNRVND 120
           VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGGGGE  LGDYS WLR RV+D
Sbjct: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGGGGEHGLGDYSTWLRKRVDD 120

Query: 121 PRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENAQDPDCYRWN 180
           PRNWVTIRSCILGSNTCNQ+ S TPLNYLQRDITPIQSGCCKPPASC+EN QDPDCYRWN
Sbjct: 121 PRNWVTIRSCILGSNTCNQLPSSTPLNYLQRDITPIQSGCCKPPASCNENGQDPDCYRWN 180

Query: 181 GAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCAFRNTKRAGEDY 240
           GAPNVLC+EC+SCKAGVLETAR+DWHKLS+LNVV+LIF I +YSIGCCAFRN KRA E+Y
Sbjct: 181 GAPNVLCFECDSCKAGVLETARKDWHKLSILNVVILIFFIVVYSIGCCAFRNAKRAEENY 240

Query: 241 AYGENRMTKIRPRWDYKMRRWLEDRKDLY 270
           AYGEN MTKI PR D+KM RWLEDR D Y
Sbjct: 241 AYGENHMTKIGPRRDHKMWRWLEDRMDRY 269

[Close]

BLAST of Lcy09g006240 vs. ExPASy TrEMBL
Match: A0A6J1JV73 (tetraspanin-6-like OS=Cucurbita maxima OX=3661 GN=LOC111489173 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 4.2e-134
Identity = 231/272 (84.93%), Postives = 253/272 (93.01%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           MNKLSNSVIGLLNFLTLL SIPIIGGALW+ARNSTTCEAFLQTPLLV+GF+VL+ISLAGF
Sbjct: 1   MNKLSNSVIGLLNFLTLLGSIPIIGGALWMARNSTTCEAFLQTPLLVLGFLVLLISLAGF 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGG---GGEERLGDYSIWLRNR 120
           VGACFNV WALWLYLF MLLLIATLLG T+FGLVVASKGGG   GGE R GDYS+WLRNR
Sbjct: 61  VGACFNVTWALWLYLFAMLLLIATLLGFTLFGLVVASKGGGGGDGGEHRFGDYSVWLRNR 120

Query: 121 VNDPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENAQDPDCY 180
           VN+P+ WVT++SCILGSNTCNQVSSWTPLNYLQ+ ITPIQ+GCCKPPASC+EN QDPDCY
Sbjct: 121 VNNPQYWVTVKSCILGSNTCNQVSSWTPLNYLQKQITPIQAGCCKPPASCTENVQDPDCY 180

Query: 181 RWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCAFRNTKRAG 240
           RWNG PNVLCY+C SCKAGVLETARRDWHKL+VLN+VMLIFLI +YSIGCCAFRNTKRA 
Sbjct: 181 RWNGVPNVLCYDCISCKAGVLETARRDWHKLTVLNIVMLIFLISVYSIGCCAFRNTKRAQ 240

Query: 241 EDYAYGENRMTKIRPRWDYKMRRWLEDRKDLY 270
            DYA+GENRM KI+P WD+KMRRWLEDR++LY
Sbjct: 241 TDYAHGENRMIKIQPTWDHKMRRWLEDRRELY 272

[Close]

BLAST of Lcy09g006240 vs. NCBI nr
Match: XP_022990440.1 (tetraspanin-6-like [Cucurbita maxima])

HSP 1 Score: 502.7 bits (1293), Expect = 2.0e-138
Identity = 245/271 (90.41%), Postives = 255/271 (94.10%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           MNKLSNSVIGLLNFLTLLASIPIIGGALW+ARNSTTCE FLQTPLLVVGFVVLVISLAGF
Sbjct: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWMARNSTTCEGFLQTPLLVVGFVVLVISLAGF 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASK--GGGGGEERLGDYSIWLRNRV 120
           VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASK  GGGGGE  LGDYS WLR RV
Sbjct: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGGGGGGEHGLGDYSTWLRKRV 120

Query: 121 NDPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENAQDPDCYR 180
           +DPRNWVTIRSCILGSNTCNQ+ SWTPLNYLQRDI+PIQSGCCKPPASCSEN QDPDCYR
Sbjct: 121 DDPRNWVTIRSCILGSNTCNQLPSWTPLNYLQRDISPIQSGCCKPPASCSENGQDPDCYR 180

Query: 181 WNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCAFRNTKRAGE 240
           WNGAPNVLCYEC+SCKAGVLETAR+DWHKLS+LNVV+LIF I +YSIGCCAFRN KRA E
Sbjct: 181 WNGAPNVLCYECDSCKAGVLETARKDWHKLSILNVVILIFFIVVYSIGCCAFRNAKRAEE 240

Query: 241 DYAYGENRMTKIRPRWDYKMRRWLEDRKDLY 270
           +YAYGENRMTKIRPRWDYKM RWLEDR D Y
Sbjct: 241 NYAYGENRMTKIRPRWDYKMWRWLEDRMDRY 271

[Close]

BLAST of Lcy09g006240 vs. NCBI nr
Match: XP_022134082.1 (tetraspanin-6-like [Momordica charantia])

HSP 1 Score: 494.2 bits (1271), Expect = 7.1e-136
Identity = 238/268 (88.81%), Postives = 255/268 (95.15%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           MNK SN+VIGLLN LTL+ASIPIIGGALW+ARNSTTCE FLQTPLLV+GFVVL+ISL GF
Sbjct: 1   MNKFSNTVIGLLNLLTLIASIPIIGGALWMARNSTTCEGFLQTPLLVLGFVVLLISLTGF 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGG-GGEERLGDYSIWLRNRVN 120
           VGACFNVAWALWLYLFVMLLLIATLLGLT+FGLVVASKGGG GGE  LGDYS WLR+RV+
Sbjct: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTLFGLVVASKGGGSGGEHGLGDYSEWLRHRVD 120

Query: 121 DPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENAQDPDCYRW 180
           DPRNW+ IRSCILGSNTCN++SSWTPLNYLQRDITPIQSGCC+PPASCSENAQDPDCYRW
Sbjct: 121 DPRNWMAIRSCILGSNTCNKLSSWTPLNYLQRDITPIQSGCCRPPASCSENAQDPDCYRW 180

Query: 181 NGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCAFRNTKRAGED 240
           NGAPNVLCYEC+SCKAGVLETAR DW KLSVLNVVMLIFLIG+YSIGCCAFRNTKRAG D
Sbjct: 181 NGAPNVLCYECDSCKAGVLETARGDWRKLSVLNVVMLIFLIGVYSIGCCAFRNTKRAGAD 240

Query: 241 YAYGENRMTKIRPRWDYKMRRWLEDRKD 268
           Y+YGENRMTKI+PRWDYKM RWLEDRK+
Sbjct: 241 YSYGENRMTKIQPRWDYKMWRWLEDRKE 268

[Close]

BLAST of Lcy09g006240 vs. NCBI nr
Match: KAG7016282.1 (Tetraspanin-6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 493.0 bits (1268), Expect = 1.6e-135
Identity = 236/272 (86.76%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           MNKLSNSVIGLLNFLTLL SIPIIGGALW+ARNSTTCEAFLQTPLLV+GF+VL+ISLAGF
Sbjct: 1   MNKLSNSVIGLLNFLTLLGSIPIIGGALWMARNSTTCEAFLQTPLLVLGFLVLLISLAGF 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGG---GGEERLGDYSIWLRNR 120
           VGACFNV+WALWLYLF MLLLIATLLG T+FGLVVASKGGG   GGE R GDYS+WLRNR
Sbjct: 61  VGACFNVSWALWLYLFAMLLLIATLLGFTLFGLVVASKGGGGGDGGEHRFGDYSVWLRNR 120

Query: 121 VNDPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENAQDPDCY 180
           VN+P+ WVTI+SCILGSNTCNQVSSWTPLNYLQR ITPIQ+GCCKPPASC+EN QDPDCY
Sbjct: 121 VNNPQYWVTIKSCILGSNTCNQVSSWTPLNYLQRQITPIQAGCCKPPASCTENVQDPDCY 180

Query: 181 RWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCAFRNTKRAG 240
           RWNGAPNVLCY+C SCKAGVLETARRDWHKLSVLN+VMLIFLI +YSIGCCAFRNTKRA 
Sbjct: 181 RWNGAPNVLCYDCISCKAGVLETARRDWHKLSVLNIVMLIFLIAVYSIGCCAFRNTKRAQ 240

Query: 241 EDYAYGENRMTKIRPRWDYKMRRWLEDRKDLY 270
            DYA+GENRM KI+P WD+KMRRWLEDRK+LY
Sbjct: 241 TDYAHGENRMIKIQPTWDHKMRRWLEDRKELY 272

[Close]

BLAST of Lcy09g006240 vs. NCBI nr
Match: KAG6578755.1 (Tetraspanin-6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 492.7 bits (1267), Expect = 2.1e-135
Identity = 236/272 (86.76%), Postives = 254/272 (93.38%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           MNKLSNSVIGLLNFLTLL SIPIIGGALW+ARNSTTCEAFLQTPLLV+GF+VL+ISLAGF
Sbjct: 1   MNKLSNSVIGLLNFLTLLGSIPIIGGALWMARNSTTCEAFLQTPLLVLGFLVLLISLAGF 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGG---GGEERLGDYSIWLRNR 120
           VGACFNV WALWLYLF MLLLIATLLG T+FGLVVASKGGG   GGE R GDYS+WLRNR
Sbjct: 61  VGACFNVTWALWLYLFAMLLLIATLLGFTLFGLVVASKGGGGGDGGEHRFGDYSVWLRNR 120

Query: 121 VNDPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENAQDPDCY 180
           VN+P+ WVTI+SCILGSNTCNQVSSWTPLNYLQR ITPIQ+GCCKPPASC+EN QDPDCY
Sbjct: 121 VNNPQYWVTIKSCILGSNTCNQVSSWTPLNYLQRQITPIQAGCCKPPASCTENVQDPDCY 180

Query: 181 RWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCAFRNTKRAG 240
           RWNGAPNVLCY+C SCKAGVLETARRDWHKLSVLN+VMLIFLI +YSIGCCAFRNTKRA 
Sbjct: 181 RWNGAPNVLCYDCISCKAGVLETARRDWHKLSVLNIVMLIFLIAVYSIGCCAFRNTKRAQ 240

Query: 241 EDYAYGENRMTKIRPRWDYKMRRWLEDRKDLY 270
            DYA+GENRM KI+P WD+KMRRWLEDRK+LY
Sbjct: 241 TDYAHGENRMIKIQPTWDHKMRRWLEDRKELY 272

[Close]

BLAST of Lcy09g006240 vs. NCBI nr
Match: XP_022939648.1 (tetraspanin-6-like [Cucurbita moschata])

HSP 1 Score: 492.7 bits (1267), Expect = 2.1e-135
Identity = 235/271 (86.72%), Postives = 254/271 (93.73%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           MNKLSNSVIGLLNFLTLL SIPIIGGALW+ARNSTTCEAFLQTPLLV+GF+VL+ISLAGF
Sbjct: 1   MNKLSNSVIGLLNFLTLLGSIPIIGGALWMARNSTTCEAFLQTPLLVLGFLVLLISLAGF 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGG--GGEERLGDYSIWLRNRV 120
           VGACFNV WALWLYLF MLLLIATLLG T+FGL+VASKGGG  GGE R GDYS+WLRNRV
Sbjct: 61  VGACFNVTWALWLYLFAMLLLIATLLGFTLFGLIVASKGGGGDGGEHRFGDYSVWLRNRV 120

Query: 121 NDPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENAQDPDCYR 180
           N+P+ WVTI+SCILGSNTCNQVSSWTPLNYLQR ITPIQ+GCCKPPASC+EN QDPDCYR
Sbjct: 121 NNPQYWVTIKSCILGSNTCNQVSSWTPLNYLQRQITPIQAGCCKPPASCTENVQDPDCYR 180

Query: 181 WNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCAFRNTKRAGE 240
           WNGAPNVLCY+C SCKAGVLETARRDWHKLSVLN+VMLIFLI +YSIGCCAFRNTKRA  
Sbjct: 181 WNGAPNVLCYDCISCKAGVLETARRDWHKLSVLNIVMLIFLIAVYSIGCCAFRNTKRAQT 240

Query: 241 DYAYGENRMTKIRPRWDYKMRRWLEDRKDLY 270
           DYA+GENRM KI+P WD+KMRRWLEDRK+LY
Sbjct: 241 DYAHGENRMIKIQPTWDHKMRRWLEDRKELY 271

[Close]

BLAST of Lcy09g006240 vs. TAIR 10
Match: AT3G12090.1 (tetraspanin6 )

HSP 1 Score: 349.0 bits (894), Expect = 3.5e-96
Identity = 169/279 (60.57%), Postives = 211/279 (75.63%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           M + SN+VIG+LN LTLLASIPIIG AL+ AR+STTCE FLQTPLLV+GF++L++SLAGF
Sbjct: 1   MYRFSNTVIGVLNLLTLLASIPIIGTALYKARSSTTCENFLQTPLLVIGFIILIVSLAGF 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGG-------GGEERLGDYSIW 120
           +GACFNVAWALW+YL VM+ LIATL+GLT+FGLVV S+GGG         E RLGDY  W
Sbjct: 61  IGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPW 120

Query: 121 LRNRVNDPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENA-- 180
           LR RV DP  W +IRSCIL S TC ++ SWT L+Y QRD+T +QSGCCKPP +C+  A  
Sbjct: 121 LRERVRDPEYWNSIRSCILSSKTCTKIESWTTLDYFQRDMTSVQSGCCKPPTACTYEAGV 180

Query: 181 --QDPDCYRWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCCA 240
                DC+RWN    +LCYEC++CKAGVLE  R DW KLSV+N+++L+ LI +Y+ GCCA
Sbjct: 181 VDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYAAGCCA 240

Query: 241 FRNTKRAGEDY-AYGENRMTKIRPRWDYKMRRWLEDRKD 268
           F NT+ A   Y    +NRMT++RPRWDY   RW  ++K+
Sbjct: 241 FHNTRHAAHPYHPSDDNRMTRVRPRWDYYWWRWWHEKKE 279

[Close]

BLAST of Lcy09g006240 vs. TAIR 10
Match: AT4G23410.1 (tetraspanin5 )

HSP 1 Score: 323.2 bits (827), Expect = 2.0e-88
Identity = 151/278 (54.32%), Postives = 202/278 (72.66%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLARNSTTCEAFLQTPLLVVGFVVLVISLAGF 60
           MN++SN+VIG LN LTL++SI ++G ALW+ R+ TTCE FLQ PLL++G  +L++S+AG 
Sbjct: 1   MNRMSNTVIGFLNILTLISSIVLLGSALWMGRSKTTCEHFLQKPLLILGLAILILSVAGL 60

Query: 61  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGG-------GGEERLGDYSIW 120
           VGAC +VAW LW+YLF M+ +I  L+GLT+FG +V S  GG         E +L  Y  W
Sbjct: 61  VGACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGVVVDGRVYKEFKLEAYHPW 120

Query: 121 LRNRVNDPRNWVTIRSCILGSNTCNQVSSWTPLNYLQRDITPIQSGCCKPPASCSENA-- 180
           L+ RV D   WVTI++C+LGS TC++++ WTPL+YLQ+D++P+QSGCCKPP SC  N   
Sbjct: 121 LKTRVVDTNYWVTIKTCLLGSVTCSKLALWTPLDYLQKDLSPLQSGCCKPPTSCVYNTDT 180

Query: 181 ---QDPDCYRWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVMLIFLIGIYSIGCC 240
              QDPDCYRWN A  VLCY+C++C+AGVLET RRDWHKLS++NV+++IFLI +Y +GCC
Sbjct: 181 VIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYCVGCC 240

Query: 241 AFRNTKRAGE-DYAYGENRMTKIRPRWDYKMRRWLEDR 266
           AF+N KR     + YG   M+K RP W+    RW   R
Sbjct: 241 AFKNAKRPQHYGFPYGRYGMSKSRPGWEQSWSRWWHGR 278

[Close]

BLAST of Lcy09g006240 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 )

HSP 1 Score: 225.7 bits (574), Expect = 4.4e-59
Identity = 111/261 (42.53%), Postives = 165/261 (63.22%), Query Frame = 0


Query: 1   MNKLSNSVIGLLNFLTLLASIPIIGGALWLA-RNSTTCEAFLQTPLLVVGFVVLVISLAG 60
           M + SN+++G+LNFL  L SIPI+ G +WL+ + ST CE FL  P++ +G  ++V+++AG
Sbjct: 1   MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 61  FVGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGGGG-------EERLGDYSI 120
            +G+C  V W LW+YLFVM LLI  +  +TVF  VV +KG G         E +LGDYS 
Sbjct: 61  LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYST 120

Query: 121 WLRNRVNDPRNWVTIRSCILGSNTCNQVSSW---TPLN-YLQRDITPIQSGCCKPPASC- 180
           WL+ RV + +NW  IRSC++ S  C+++ +     P+N + +  +T +QSGCCKP   C 
Sbjct: 121 WLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECG 180

Query: 181 -------------SENAQDPDCYRWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVV 236
                        +    +PDC  W+ A   LC++C SCKAG+L+  +  W K++++N+V
Sbjct: 181 FEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIV 240

[Close]

BLAST of Lcy09g006240 vs. TAIR 10
Match: AT3G45600.1 (tetraspanin3 )

HSP 1 Score: 221.5 bits (563), Expect = 8.3e-58
Identity = 123/280 (43.93%), Postives = 167/280 (59.64%), Query Frame = 0


Query: 3   KLSNSVIGLLNFLTLLASIPIIGGALWLA--RNSTTCEAFLQTPLLVVGFVVLVISLAGF 62
           + SN +IGL+NFLT L SIPI+GG +WL+   NST C  FLQ PL+V+G  ++V+SLAGF
Sbjct: 2   RTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGF 61

Query: 63  VGACFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGGGG-------EERLGDYSIW 122
            GAC+   + +WLYL VMLL+IA L+G  +F   V  KG G         +  L DYS W
Sbjct: 62  AGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGW 121

Query: 123 LRNRVNDPRNWVTIRSCILGSNTC-------NQVSSWTPLNYLQRDITPIQSGCCKPPAS 182
           L++RV+D   W  I SC+  S  C       N V     + +L+R ++P++SGCCKPP  
Sbjct: 122 LKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRR-LSPVESGCCKPPTD 181

Query: 183 C-----SENAQD---------PDCYRWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLN 242
           C     +E   D          DC  W+   ++LCY+C+SCKAGVL + ++ W K+SV+N
Sbjct: 182 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 241

Query: 243 VVMLIFLIGIYSIGCCAFRNTKRAGEDYAYGENRMTKIRP 253
           +V+LI L+  Y I   A+RN KR   D   GE RMTK  P
Sbjct: 242 IVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHP 280

[Close]

BLAST of Lcy09g006240 vs. TAIR 10
Match: AT5G60220.1 (tetraspanin4 )

HSP 1 Score: 219.2 bits (557), Expect = 4.1e-57
Identity = 114/274 (41.61%), Postives = 160/274 (58.39%), Query Frame = 0


Query: 6   NSVIGLLNFLTLLASIPIIGGALWLA--RNSTTCEAFLQTPLLVVGFVVLVISLAGFVGA 65
           +++IGL+NF T L SIPI+GG +WL+   NST C  FLQ PL+++G  ++VISLAG  GA
Sbjct: 5   SNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGA 64

Query: 66  CFNVAWALWLYLFVMLLLIATLLGLTVFGLVVASKGGGGG-------EERLGDYSIWLRN 125
           C+   + +WLYLF M  +IA L+G T+F  VV  KG G         +  L DYS WL++
Sbjct: 65  CYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKD 124

Query: 126 RVNDPRNWVTIRSCILGSNTCNQVS------SWTPLNYLQRDITPIQSGCCKPPASCSEN 185
           RV D   W  I SC+  S  C ++         T   +  R+++P++SGCCKPP  C   
Sbjct: 125 RVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYT 184

Query: 186 --------------AQDPDCYRWNGAPNVLCYECNSCKAGVLETARRDWHKLSVLNVVML 245
                           +PDC  WN    +LCY+C+SCKAGVL + ++ W K+SV+N+V++
Sbjct: 185 YVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVV 244

Query: 246 IFLIGIYSIGCCAFRNTKRAGEDYAYGENRMTKI 251
           I L+  Y I C A++N KR   D   GE RMT +
Sbjct: 245 IILVIFYVIACAAYQNVKRMYNDEPVGEARMTNL 278

The following BLAST results are available for this feature:

BLAST of Lcy09g006240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7C1	4.9e-95	60.57	Tetraspanin-6 OS=Arabidopsis thaliana OX=3702 GN=TET6 PE=2 SV=1	[more]
Q84WF6	2.9e-87	54.32	Tetraspanin-5 OS=Arabidopsis thaliana OX=3702 GN=TET5 PE=2 SV=1	[more]
Q8S8Q6	6.2e-58	42.53	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]
Q9M1E7	1.2e-56	43.93	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]
Q9LSS4	5.8e-56	41.61	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]

BLAST of Lcy09g006240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQ40	9.7e-139	90.41	tetraspanin-6-like OS=Cucurbita maxima OX=3661 GN=LOC111487296 PE=4 SV=1	[more]
A0A6J1BYK5	3.5e-136	88.81	tetraspanin-6-like OS=Momordica charantia OX=3673 GN=LOC111006441 PE=4 SV=1	[more]
A0A6J1FM74	1.0e-135	86.72	tetraspanin-6-like OS=Cucurbita moschata OX=3662 GN=LOC111445479 PE=4 SV=1	[more]
A0A6J1HAU2	1.1e-134	88.85	tetraspanin-6-like OS=Cucurbita moschata OX=3662 GN=LOC111462197 PE=4 SV=1	[more]
A0A6J1JV73	4.2e-134	84.93	tetraspanin-6-like OS=Cucurbita maxima OX=3661 GN=LOC111489173 PE=4 SV=1	[more]

BLAST of Lcy09g006240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990440.1	2.0e-138	90.41	tetraspanin-6-like [Cucurbita maxima]	[more]
XP_022134082.1	7.1e-136	88.81	tetraspanin-6-like [Momordica charantia]	[more]
KAG7016282.1	1.6e-135	86.76	Tetraspanin-6 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6578755.1	2.1e-135	86.76	Tetraspanin-6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022939648.1	2.1e-135	86.72	tetraspanin-6-like [Cucurbita moschata]	[more]

BLAST of Lcy09g006240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12090.1	3.5e-96	60.57	tetraspanin6	[more]
AT4G23410.1	2.0e-88	54.32	tetraspanin5	[more]
AT2G23810.1	4.4e-59	42.53	tetraspanin8	[more]
AT3G45600.1	8.3e-58	43.93	tetraspanin3	[more]
AT5G60220.1	4.1e-57	41.61	tetraspanin4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 8..229 e-value: 1.7E-27 score: 96.6
None	No IPR available	PANTHER	PTHR32191:SF40	TETRASPANIN/PERIPHERIN-RELATED	coord: 1..261
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 1..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g006240.1	Lcy09g006240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma