Lcy09g006120 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g006120
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr09: 5309517 .. 5310122 (-)
RNA-Seq ExpressionLcy09g006120
SyntenyLcy09g006120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCAACCATCATATCAGCAAAATGGTAGAAGGCTTGTTTGAAGCAGCAAAAAATTTGAGAAAAGCAATTGAGAATGCGAAACATCTCTTATCCCGAATACATGAAGACACGGTGAGCCTCAATTCAATATTGACGCAACTTCGTGGCAGAGTCCAAGGCCATGGTCTTGGCCAAGACCATGAAGATCAAGGTCGTGGCCATGGCCAACACCGCGGCCGGCAGCAGCATAATGATCAAAGGAACGAGGCTCTTCGTCAAGAACGACGAAGGCCGAGTGAAAATCTACTCCACGAGAGACGAAGACGAAGTTATGAAGACCGAAGACAGAATGGGGAGGATGGGGGGATGATGCCAAAGCCAAAAATAGAGTGGGGAGGATGGGGGACGATGTCGATGTCGACGACGGAATCGGATGGGTCGACGTCAACGTCGATGACAGAATCGGAGACGTCGATGTCGATGACGGAATCGGATGGAGAGACGACGACGTCGACGTCAATGACGGAATCGGATGGAGAGACGACAACGACACGTCGACTTCGAAGACGAAGACGAAGACGGAACATGATGGAGAGACGACGACAACGACAGAATGAGATGAGGTGA

mRNA sequence

CGCAACCATCATATCAGCAAAATGGTAGAAGGCTTGTTTGAAGCAGCAAAAAATTTGAGAAAAGCAATTGAGAATGCGAAACATCTCTTATCCCGAATACATGAAGACACGGTGAGCCTCAATTCAATATTGACGCAACTTCGTGGCAGAGTCCAAGGCCATGGTCTTGGCCAAGACCATGAAGATCAAGGTCGTGGCCATGGCCAACACCGCGGCCGGCAGCAGCATAATGATCAAAGGAACGAGGCTCTTCGTCAAGAACGACGAAGGCCGAGTGAAAATCTACTCCACGAGAGACGAAGACGAAGTTATGAAGACCGAAGACAGAATGGGGAGGATGGGGGGATGATGCCAAAGCCAAAAATAGAGTGGGGAGGATGGGGGACGATGTCGATGTCGACGACGGAATCGGATGGGTCGACGTCAACGTCGATGACAGAATCGGAGACGTCGATGTCGATGACGGAATCGGATGGAGAGACGACGACGTCGACGTCAATGACGGAATCGGATGGAGAGACGACAACGACACGTCGACTTCGAAGACGAAGACGAAGACGGAACATGATGGAGAGACGACGACAACGACAGAATGAGATGAGGTGA

Coding sequence (CDS)

ATGGTAGAAGGCTTGTTTGAAGCAGCAAAAAATTTGAGAAAAGCAATTGAGAATGCGAAACATCTCTTATCCCGAATACATGAAGACACGGTGAGCCTCAATTCAATATTGACGCAACTTCGTGGCAGAGTCCAAGGCCATGGTCTTGGCCAAGACCATGAAGATCAAGGTCGTGGCCATGGCCAACACCGCGGCCGGCAGCAGCATAATGATCAAAGGAACGAGGCTCTTCGTCAAGAACGACGAAGGCCGAGTGAAAATCTACTCCACGAGAGACGAAGACGAAGTTATGAAGACCGAAGACAGAATGGGGAGGATGGGGGGATGATGCCAAAGCCAAAAATAGAGTGGGGAGGATGGGGGACGATGTCGATGTCGACGACGGAATCGGATGGGTCGACGTCAACGTCGATGACAGAATCGGAGACGTCGATGTCGATGACGGAATCGGATGGAGAGACGACGACGTCGACGTCAATGACGGAATCGGATGGAGAGACGACAACGACACGTCGACTTCGAAGACGAAGACGAAGACGGAACATGATGGAGAGACGACGACAACGACAGAATGAGATGAGGTGA

Protein sequence

MVEGLFEAAKNLRKAIENAKHLLSRIHEDTVSLNSILTQLRGRVQGHGLGQDHEDQGRGHGQHRGRQQHNDQRNEALRQERRRPSENLLHERRRRSYEDRRQNGEDGGMMPKPKIEWGGWGTMSMSTTESDGSTSTSMTESETSMSMTESDGETTTSTSMTESDGETTTTRRLRRRRRRRNMMERRRQRQNEMR
Homology
The following BLAST results are available for this feature:
BLAST of Lcy09g006120 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy09g006120 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy09g006120 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy09g006120 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g006120.1Lcy09g006120.1mRNA