Lcy09g005700 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g005700
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionHexose transporter HXT14
LocationChr09: 5002922 .. 5003252 (-)
RNA-Seq ExpressionLcy09g005700
SyntenyLcy09g005700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTCAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCCTTCCTTATTGCTTGGGCCGCAGCTCTCCAGGTGCAATTCCCTGTTTTAGGTTTTAACTTTTGACTTTACCGCTTTTCTTTTTCCATTCAAACTATCTGTTGTTGTAAAGGGGCTGAAAATTGTTGAACTCTTAACTGATTTGGATTCTGGGCTCGATTTGAACTTTAAAATTGAATGTGGGGAATAATTTTTGGTACAGGGGCACATGATGTGGATGCAGAAGCAGGATTCTTCCAAGCAGAAGTTTGGAACCCCCAATCAAGAAAATGATCCTGAAAAATGA

mRNA sequence

ATGGAAGTCAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCCTTCCTTATTGCTTGGGCCGCAGCTCTCCAGGGGCACATGATGTGGATGCAGAAGCAGGATTCTTCCAAGCAGAAGTTTGGAACCCCCAATCAAGAAAATGATCCTGAAAAATGA

Coding sequence (CDS)

ATGGAAGTCAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCCTTCCTTATTGCTTGGGCCGCAGCTCTCCAGGGGCACATGATGTGGATGCAGAAGCAGGATTCTTCCAAGCAGAAGTTTGGAACCCCCAATCAAGAAAATGATCCTGAAAAATGA

Protein sequence

MEVKNLLKDKKFWFASFLIAWAAALQGHMMWMQKQDSSKQKFGTPNQENDPEK
Homology
BLAST of Lcy09g005700 vs. ExPASy TrEMBL
Match: A0A6J1BYL0 (uncharacterized protein LOC111006648 OS=Momordica charantia OX=3673 GN=LOC111006648 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.0e-20
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWMQKQDSSKQKFGTPNQENDPEK 54
          M+VKNLLKDKKFWFASFLIAWAAALQGHMMW+Q+QDS KQKFGTPNQENDPEK
Sbjct: 1  MDVKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTPNQENDPEK 53

BLAST of Lcy09g005700 vs. ExPASy TrEMBL
Match: A0A6J1HBY0 (uncharacterized protein LOC111462684 OS=Cucurbita moschata OX=3662 GN=LOC111462684 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.8e-19
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWMQKQDSSKQKFGTPNQENDPEK 54
          MEVKNLLKDKKFWFASFLIAWAAALQGHMMW+Q+QDS KQKFGT +QENDPEK
Sbjct: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTSDQENDPEK 53

BLAST of Lcy09g005700 vs. ExPASy TrEMBL
Match: A0A6J1JTH2 (uncharacterized protein LOC111487347 OS=Cucurbita maxima OX=3661 GN=LOC111487347 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.5e-19
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWMQKQDSSKQKFGTPNQENDPEK 54
          ME+KNLLKDKKFWFASFLIAWAAALQGHMMW+Q+QDS KQKFGT +QENDPEK
Sbjct: 1  MEIKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTSDQENDPEK 53

BLAST of Lcy09g005700 vs. ExPASy TrEMBL
Match: A0A1S3CJC2 (uncharacterized protein LOC103501645 OS=Cucumis melo OX=3656 GN=LOC103501645 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.9e-18
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0

Query: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWMQKQDSSKQKFGTPNQENDPEK 54
          ME KNLLKDKKFWFASFLIAWAAALQGHMM++QKQDS KQKFGTPNQEND EK
Sbjct: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDTEK 53

BLAST of Lcy09g005700 vs. ExPASy TrEMBL
Match: A0A5D3C322 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002860 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.9e-18
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0

Query: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWMQKQDSSKQKFGTPNQENDPEK 54
          ME KNLLKDKKFWFASFLIAWAAALQGHMM++QKQDS KQKFGTPNQEND EK
Sbjct: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDTEK 53

BLAST of Lcy09g005700 vs. NCBI nr
Match: XP_022134369.1 (uncharacterized protein LOC111006648 [Momordica charantia])

HSP 1 Score: 106.3 bits (264), Expect = 8.2e-20
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWMQKQDSSKQKFGTPNQENDPEK 54
          M+VKNLLKDKKFWFASFLIAWAAALQGHMMW+Q+QDS KQKFGTPNQENDPEK
Sbjct: 1  MDVKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTPNQENDPEK 53

BLAST of Lcy09g005700 vs. NCBI nr
Match: XP_022962147.1 (uncharacterized protein LOC111462684 [Cucurbita moschata] >XP_023534763.1 uncharacterized protein LOC111796233 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWMQKQDSSKQKFGTPNQENDPEK 54
          MEVKNLLKDKKFWFASFLIAWAAALQGHMMW+Q+QDS KQKFGT +QENDPEK
Sbjct: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTSDQENDPEK 53

BLAST of Lcy09g005700 vs. NCBI nr
Match: XP_022990508.1 (uncharacterized protein LOC111487347 [Cucurbita maxima])

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-18
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWMQKQDSSKQKFGTPNQENDPEK 54
          ME+KNLLKDKKFWFASFLIAWAAALQGHMMW+Q+QDS KQKFGT +QENDPEK
Sbjct: 1  MEIKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTSDQENDPEK 53

BLAST of Lcy09g005700 vs. NCBI nr
Match: XP_008463489.1 (PREDICTED: uncharacterized protein LOC103501645 [Cucumis melo] >XP_016903048.1 PREDICTED: uncharacterized protein LOC103501645 [Cucumis melo] >TYK05785.1 putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 5.9e-18
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0

Query: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWMQKQDSSKQKFGTPNQENDPEK 54
          ME KNLLKDKKFWFASFLIAWAAALQGHMM++QKQDS KQKFGTPNQEND EK
Sbjct: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDTEK 53

BLAST of Lcy09g005700 vs. NCBI nr
Match: XP_031742184.1 (uncharacterized protein LOC101219597 [Cucumis sativus] >XP_031742185.1 uncharacterized protein LOC101219597 [Cucumis sativus] >XP_031742186.1 uncharacterized protein LOC101219597 [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 7.7e-18
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0

Query: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWMQKQDSSKQKFGTPNQENDPEK 54
          ME KNLLKDKKFWFASFLIAWAAALQGHMM++QKQDS KQKFGTPNQEND EK
Sbjct: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNEK 53

BLAST of Lcy09g005700 vs. TAIR 10
Match: AT2G39500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 1.9e-14
Identity = 31/48 (64.58%), Postives = 42/48 (87.50%), Query Frame = 0

Query: 2  EVKNLLKDKKFWFASFLIAWAAALQGHMMWMQKQDSSKQKFGTPNQEN 50
          +VK ++KDK+FW ASF+I WAA LQGHMMW+QKQ+S KQKFGT ++++
Sbjct: 6  DVKTIVKDKRFWIASFIIVWAAGLQGHMMWLQKQESFKQKFGTIDEDD 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1BYL04.0e-2092.45uncharacterized protein LOC111006648 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A6J1HBY05.8e-1990.57uncharacterized protein LOC111462684 OS=Cucurbita moschata OX=3662 GN=LOC1114626... [more]
A0A6J1JTH27.5e-1988.68uncharacterized protein LOC111487347 OS=Cucurbita maxima OX=3661 GN=LOC111487347... [more]
A0A1S3CJC22.9e-1890.57uncharacterized protein LOC103501645 OS=Cucumis melo OX=3656 GN=LOC103501645 PE=... [more]
A0A5D3C3222.9e-1890.57Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
Match NameE-valueIdentityDescription
XP_022134369.18.2e-2092.45uncharacterized protein LOC111006648 [Momordica charantia][more]
XP_022962147.11.2e-1890.57uncharacterized protein LOC111462684 [Cucurbita moschata] >XP_023534763.1 unchar... [more]
XP_022990508.11.6e-1888.68uncharacterized protein LOC111487347 [Cucurbita maxima][more]
XP_008463489.15.9e-1890.57PREDICTED: uncharacterized protein LOC103501645 [Cucumis melo] >XP_016903048.1 P... [more]
XP_031742184.17.7e-1890.57uncharacterized protein LOC101219597 [Cucumis sativus] >XP_031742185.1 uncharact... [more]
Match NameE-valueIdentityDescription
AT2G39500.11.9e-1464.58unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR48183PROTEIN, PUTATIVE-RELATEDcoord: 2..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g005700.1Lcy09g005700.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane