Lcy09g005560 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g005560
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	major pollen allergen Ole e 6-like
Location	Chr09: 4854525 .. 4855173 (-)
RNA-Seq Expression	Lcy09g005560
Synteny	Lcy09g005560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGAAGATGATTGCAGTGTTTCTTTTGTGCATTGTTGTGATGGCTGCATTGCAGGTTTCCAGTGCCAATAATGACGATGGCGACATTTGGCCTCTCCACGCTGGTGTTGATCCTCTTCCCAAGGAGAAGGAGGCCAAATTCGAGGCTAAATTTGATGCCAAGTACAAGTCTTGCTATGAAAATTGCCTCAAGGAATGTCTCGCCAAAGAGAGCCAAAGCTTCTGTGAAGTCAAATGTGATGAAGATTGCGGCGATAAGGAAGTTGCTGGTACTCTCTCTTCTCTCCGTATCTCTCTTTAATTTTCTAATAGGGAATGAAGGTCACTTCACTCGTTGTTGATTGGTTTTGAGATGGAACCTATGCTATTGGATATGAAATATTAATTTAAATTGTTATTTATTTTACAGATAAACTGGACATTAAGATACCAGGTGGACAGTAAAGGAAAGAAGAGCTCTTGAGAATGGTCGTACTTATGTCAGGATCATGAAGTGTAATAAAATCAAGTCTGAAAGGAGTTAATAAACTTCCTTTGTAATCTTTCCCAAAAACTTCCTTTGTAATCTTTCTCATTTTAATGTTATTTTGAATTTATTTATAAAGTTCTTTCTTTGGTATCATTGAATTGTGAATCAACCAGGT

mRNA sequence

ATGGCGAAGAAGATGATTGCAGTGTTTCTTTTGTGCATTGTTGTGATGGCTGCATTGCAGGTTTCCAGTGCCAATAATGACGATGGCGACATTTGGCCTCTCCACGCTGGTGTTGATCCTCTTCCCAAGGAGAAGGAGGCCAAATTCGAGGCTAAATTTGATGCCAAGTACAAGTCTTGCTATGAAAATTGCCTCAAGGAATGTCTCGCCAAAGAGAGCCAAAGCTTCTGTGAAGTCAAATGTGATGAAGATTGCGGCGATAAGGAAGTTGCTGATAAACTGGACATTAAGATACCAGGTGGACAGTAAAGGAAAGAAGAGCTCTTGAGAATGGTCGTACTTATGTCAGGATCATGAAGTGTAATAAAATCAAGTCTGAAAGGAGTTAATAAACTTCCTTTGTAATCTTTCCCAAAAACTTCCTTTGTAATCTTTCTCATTTTAATGTTATTTTGAATTTATTTATAAAGTTCTTTCTTTGGTATCATTGAATTGTGAATCAACCAGGT

Coding sequence (CDS)

ATGGCGAAGAAGATGATTGCAGTGTTTCTTTTGTGCATTGTTGTGATGGCTGCATTGCAGGTTTCCAGTGCCAATAATGACGATGGCGACATTTGGCCTCTCCACGCTGGTGTTGATCCTCTTCCCAAGGAGAAGGAGGCCAAATTCGAGGCTAAATTTGATGCCAAGTACAAGTCTTGCTATGAAAATTGCCTCAAGGAATGTCTCGCCAAAGAGAGCCAAAGCTTCTGTGAAGTCAAATGTGATGAAGATTGCGGCGATAAGGAAGTTGCTGATAAACTGGACATTAAGATACCAGGTGGACAGTAA

Protein sequence

MAKKMIAVFLLCIVVMAALQVSSANNDDGDIWPLHAGVDPLPKEKEAKFEAKFDAKYKSCYENCLKECLAKESQSFCEVKCDEDCGDKEVADKLDIKIPGGQ

Homology

[Close]

BLAST of Lcy09g005560 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 8.8e-05
Identity = 21/43 (48.84%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 54 DAKYKSCYENCLKECLAK-ESQSFCEVKCDEDCGDKEVADKLD 96
          +A++K CY+ C KEC  K    +FCE+KCD DC  K+V +KL+
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKLE 44

[Close]

BLAST of Lcy09g005560 vs. ExPASy TrEMBL
Match: A0A6J1JXL5 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.4e-21
Identity = 63/99 (63.64%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 1  MAKKMIAVFLLCIVVMAALQVSSANNDDGDIWPLHAGVDPLPKEKEAKFEAKFDAKYKSC 60
          MAKKMIAV L+CIVVMAALQVSSA                    KEAK+EAKF+AKY+ C
Sbjct: 1  MAKKMIAVLLVCIVVMAALQVSSATE----------------SVKEAKYEAKFEAKYRLC 60

Query: 61 YENCLKECLAK-ESQSFCEVKCDEDCGDKEVADKLDIKI 99
          YE C KECL K   QSFCEVKCDEDCG+KE ADKL IK+
Sbjct: 61 YEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

[Close]

BLAST of Lcy09g005560 vs. ExPASy TrEMBL
Match: A0A6J1EQ21 (major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.1e-21
Identity = 62/99 (62.63%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 1  MAKKMIAVFLLCIVVMAALQVSSANNDDGDIWPLHAGVDPLPKEKEAKFEAKFDAKYKSC 60
          MAKKMIAV L+CIVV+AALQVSSA                    KEAK+EAKF+AKY+ C
Sbjct: 1  MAKKMIAVLLVCIVVVAALQVSSATE----------------SAKEAKYEAKFEAKYRLC 60

Query: 61 YENCLKECLAK-ESQSFCEVKCDEDCGDKEVADKLDIKI 99
          YE C KECL K   QSFCEVKCDEDCG+KE ADKL IK+
Sbjct: 61 YEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

[Close]

BLAST of Lcy09g005560 vs. ExPASy TrEMBL
Match: A0A6J1JVQ4 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488292 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.1e-21
Identity = 62/99 (62.63%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 1  MAKKMIAVFLLCIVVMAALQVSSANNDDGDIWPLHAGVDPLPKEKEAKFEAKFDAKYKSC 60
          MAKK+IAV L+CIVVMAALQVSSA                    KEAK+EAKF+AKY+ C
Sbjct: 1  MAKKIIAVLLVCIVVMAALQVSSATE----------------SVKEAKYEAKFEAKYRLC 60

Query: 61 YENCLKECLAK-ESQSFCEVKCDEDCGDKEVADKLDIKI 99
          YE C KECL K   QSFCEVKCDEDC +KEVADKL IK+
Sbjct: 61 YEKCEKECLEKGNDQSFCEVKCDEDCDEKEVADKLHIKV 83

[Close]

BLAST of Lcy09g005560 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.6e-20
Identity = 59/99 (59.60%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 1  MAKKMIAVFLLCIVVMAALQVSSANNDDGDIWPLHAGVDPLPKEKEAKFEAKFDAKYKSC 60
          MAKKMIA+FL+CIVV+AALQ +SAN +D                + AK+EAKFDAKYKSC
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKED----------------EVAKYEAKFDAKYKSC 60

Query: 61 YENCLKECLAKES-QSFCEVKCDEDCGDKEVADKLDIKI 99
          ++ C KECL   S QS+CEVKCDEDC +KEVADKL I++
Sbjct: 61 FKTCEKECLENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Lcy09g005560 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.6e-20
Identity = 59/99 (59.60%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 1  MAKKMIAVFLLCIVVMAALQVSSANNDDGDIWPLHAGVDPLPKEKEAKFEAKFDAKYKSC 60
          MAKKMIA+FL+CIVV+AALQ +SAN +D                + AK+EAKFDAKYKSC
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKED----------------EVAKYEAKFDAKYKSC 60

Query: 61 YENCLKECLAKES-QSFCEVKCDEDCGDKEVADKLDIKI 99
          ++ C KECL   S QS+CEVKCDEDC +KEVADKL I++
Sbjct: 61 FKTCEKECLENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Lcy09g005560 vs. NCBI nr
Match: XP_022992458.1 (major pollen allergen Ole e 6-like [Cucurbita maxima] >XP_022992459.1 major pollen allergen Ole e 6-like [Cucurbita maxima])

HSP 1 Score: 112.1 bits (279), Expect = 2.9e-21
Identity = 63/99 (63.64%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 1  MAKKMIAVFLLCIVVMAALQVSSANNDDGDIWPLHAGVDPLPKEKEAKFEAKFDAKYKSC 60
          MAKKMIAV L+CIVVMAALQVSSA                    KEAK+EAKF+AKY+ C
Sbjct: 1  MAKKMIAVLLVCIVVMAALQVSSATE----------------SVKEAKYEAKFEAKYRLC 60

Query: 61 YENCLKECLAK-ESQSFCEVKCDEDCGDKEVADKLDIKI 99
          YE C KECL K   QSFCEVKCDEDCG+KE ADKL IK+
Sbjct: 61 YEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

[Close]

BLAST of Lcy09g005560 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 112.1 bits (279), Expect = 2.9e-21
Identity = 62/99 (62.63%), Postives = 71/99 (71.72%), Query Frame = 0


Query: 1  MAKKMIAVFLLCIVVMAALQVSSANNDDGDIWPLHAGVDPLPKEKEAKFEAKFDAKYKSC 60
          MAKKM+AVFL+CIVV+AALQ ++AN D+                   K+EAKFDAKYKSC
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATANEDE-----------------VTKYEAKFDAKYKSC 60

Query: 61 YENCLKECLAKES-QSFCEVKCDEDCGDKEVADKLDIKI 99
          YE C KECLA  S QSFCEVKCDEDC +KEVADKL IK+
Sbjct: 61 YETCEKECLANGSGQSFCEVKCDEDCDEKEVADKLHIKL 82

[Close]

BLAST of Lcy09g005560 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 111.3 bits (277), Expect = 4.9e-21
Identity = 63/98 (64.29%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 1  MAKKMIAVFLLCIVVMAALQVSSANNDDGDIWPLHAGVDPLPKEKEAKFEAKFDAKYKSC 60
          MAKKMIAVFL+CIVVMAALQ ++AN                  E+ AK+EAKFDAKYKSC
Sbjct: 1  MAKKMIAVFLMCIVVMAALQFTTAN------------------EEVAKYEAKFDAKYKSC 60

Query: 61 YENCLKECLAK-ESQSFCEVKCDEDCGDKEVADKLDIK 98
          YE C KECL K   QSFCEVKCDEDC +KE ADKL IK
Sbjct: 61 YETCEKECLEKGNGQSFCEVKCDEDCDEKETADKLHIK 80

[Close]

BLAST of Lcy09g005560 vs. NCBI nr
Match: XP_022929811.1 (major pollen allergen Ole e 6-like [Cucurbita moschata] >XP_022929878.1 major pollen allergen Ole e 6-like [Cucurbita moschata] >XP_022929879.1 major pollen allergen Ole e 6-like [Cucurbita moschata] >XP_022929880.1 major pollen allergen Ole e 6-like [Cucurbita moschata])

HSP 1 Score: 110.9 bits (276), Expect = 6.4e-21
Identity = 62/99 (62.63%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 1  MAKKMIAVFLLCIVVMAALQVSSANNDDGDIWPLHAGVDPLPKEKEAKFEAKFDAKYKSC 60
          MAKKMIAV L+CIVV+AALQVSSA                    KEAK+EAKF+AKY+ C
Sbjct: 1  MAKKMIAVLLVCIVVVAALQVSSATE----------------SAKEAKYEAKFEAKYRLC 60

Query: 61 YENCLKECLAK-ESQSFCEVKCDEDCGDKEVADKLDIKI 99
          YE C KECL K   QSFCEVKCDEDCG+KE ADKL IK+
Sbjct: 61 YEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

[Close]

BLAST of Lcy09g005560 vs. NCBI nr
Match: KAG6575285.1 (Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG6575288.1 Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG6575294.1 Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110.9 bits (276), Expect = 6.4e-21
Identity = 62/99 (62.63%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 1  MAKKMIAVFLLCIVVMAALQVSSANNDDGDIWPLHAGVDPLPKEKEAKFEAKFDAKYKSC 60
          MAKKMIAV L+CIVV+AALQVSSA                    KEAK+EAKF+AKY+ C
Sbjct: 1  MAKKMIAVLLVCIVVVAALQVSSATE----------------SAKEAKYEAKFEAKYRLC 60

Query: 61 YENCLKECLAK-ESQSFCEVKCDEDCGDKEVADKLDIKI 99
          YE C KECL K   QSFCEVKCDEDCG+KE ADKL IK+
Sbjct: 61 YEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

The following BLAST results are available for this feature:

BLAST of Lcy09g005560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24172	8.8e-05	48.84	Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1	[more]

BLAST of Lcy09g005560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JXL5	1.4e-21	63.64	major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 P...	[more]
A0A6J1EQ21	3.1e-21	62.63	major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354...	[more]
A0A6J1JVQ4	9.1e-21	62.63	major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488292 P...	[more]
A0A5D3BCS2	2.6e-20	59.60	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C530	2.6e-20	59.60	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ...	[more]

BLAST of Lcy09g005560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992458.1	2.9e-21	63.64	major pollen allergen Ole e 6-like [Cucurbita maxima] >XP_022992459.1 major poll...	[more]
XP_038891517.1	2.9e-21	62.63	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038906682.1	4.9e-21	64.29	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_022929811.1	6.4e-21	62.63	major pollen allergen Ole e 6-like [Cucurbita moschata] >XP_022929878.1 major po...	[more]
KAG6575285.1	6.4e-21	62.63	Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]

BLAST of Lcy09g005560 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 60..94 e-value: 8.0E-8 score: 32.1
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 1..28 coord: 43..98
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 54..98 e-value: 5.5E-13 score: 50.2
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 54..95
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 43..98
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 1..28

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g005560.1	Lcy09g005560.1	mRNA