Lcy09g005440 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g005440
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CASP-like protein
Location	Chr09: 4785128 .. 4786198 (-)
RNA-Seq Expression	Lcy09g005440
Synteny	Lcy09g005440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTTTGGGTGATGGCTGCCTCAAAGGGTTCAAGAATTGCTTCACTTATATTGAGAATTTTGACCTTCATTTTGATCTTTATTTCTCTCCTAATCAATGCCACCAATTCTAAAACTGTGCTCAAAGGGACTGTCGGTGAATTTAAAGTCGAGTTTAAAGATGTTTATTCTTATCGGTAAGTCTTTCCTGAGTATGATTATTTCTTTAAATTCTAAACAACTTTTGTTTTAATCTTTTGTGGATCGAGGATGTAACGATTTTATTTTTTGTAATTTAAATGTACAGTTATTTAATATCAGCAGCTGTTATAGGAGCTGTTTTGAGTCTGCTGCAAATTGCTCTCACTATTTACCATATTGTTACCAAAAGCGATGGAACTCCCCTCTTTGATTTGTTCAGTGATAAGGTGATTGCAATAACATATTCATTTTTAATTTATATGTTTGATATATAAGATTTTGATGGGTCGTCTCGTCAAACATGAGCATAGTTCAACTGGTAGTAAGTAAAATTTTATGTTTTTCTATGCAGTTCTTGTCGTATCTTTTGTTATCGGGCGCCTCGGCGGGATTAGGCGCTGGGATCGATCTCAAAGTGAATCTTAAAGATGTTTTTGGCAACGTTTTGAACTCGTTTTTCGACAAGGGAAGTGCTGCAGCTGCTGTTCTTCTCCTTGCCTTTTTCTGCACTGCCATTGTCTCAATTCTCTCTTCATTGGCCCTCATCAGAAAGCCTTGATCAATAATTTCTTCCCATCACAAAAGCACTTCTTCTGATTGACTTTGGTTTGGTTTGTGTTTATATTTGTAATGTTGGATTGTTTCTATTGATTTTTTTTTGTAGTATAATAACGGTAGGAGTGAGCATTTGAACCTCTGACCTTGTGGAGGAGTTGATGTGATCTTATCCACTACATTATGTTCATGTTGGTGTATTATTTTTTAATGACTTTTGTATTTATGTAGCTCCTTCGATATTTGGTTTGGTAGGGTTGAAAATTCAGTTGTTAATATGTGTTAGCACTTTGTGATTTTAGCTGAATGAATGTTTAATTATTCTAAAAAAAAAT

mRNA sequence

AAAATTTTGGGTGATGGCTGCCTCAAAGGGTTCAAGAATTGCTTCACTTATATTGAGAATTTTGACCTTCATTTTGATCTTTATTTCTCTCCTAATCAATGCCACCAATTCTAAAACTGTGCTCAAAGGGACTGTCGGTGAATTTAAAGTCGAGTTTAAAGATGTTTATTCTTATCGTTATTTAATATCAGCAGCTGTTATAGGAGCTGTTTTGAGTCTGCTGCAAATTGCTCTCACTATTTACCATATTGTTACCAAAAGCGATGGAACTCCCCTCTTTGATTTGTTCAGTGATAAGTTCTTGTCGTATCTTTTGTTATCGGGCGCCTCGGCGGGATTAGGCGCTGGGATCGATCTCAAAGTGAATCTTAAAGATGTTTTTGGCAACGTTTTGAACTCGTTTTTCGACAAGGGAAGTGCTGCAGCTGCTGTTCTTCTCCTTGCCTTTTTCTGCACTGCCATTGTCTCAATTCTCTCTTCATTGGCCCTCATCAGAAAGCCTTGATCAATAATTTCTTCCCATCACAAAAGCACTTCTTCTGATTGACTTTGGTTTGGTTTGTGTTTATATTTGTAATGTTGGATTGTTTCTATTGATTTTTTTTTGTAGTATAATAACGGTAGGAGTGAGCATTTGAACCTCTGACCTTGTGGAGGAGTTGATGTGATCTTATCCACTACATTATGTTCATGTTGGTGTATTATTTTTTAATGACTTTTGTATTTATGTAGCTCCTTCGATATTTGGTTTGGTAGGGTTGAAAATTCAGTTGTTAATATGTGTTAGCACTTTGTGATTTTAGCTGAATGAATGTTTAATTATTCTAAAAAAAAAT

Coding sequence (CDS)

ATGGCTGCCTCAAAGGGTTCAAGAATTGCTTCACTTATATTGAGAATTTTGACCTTCATTTTGATCTTTATTTCTCTCCTAATCAATGCCACCAATTCTAAAACTGTGCTCAAAGGGACTGTCGGTGAATTTAAAGTCGAGTTTAAAGATGTTTATTCTTATCGTTATTTAATATCAGCAGCTGTTATAGGAGCTGTTTTGAGTCTGCTGCAAATTGCTCTCACTATTTACCATATTGTTACCAAAAGCGATGGAACTCCCCTCTTTGATTTGTTCAGTGATAAGTTCTTGTCGTATCTTTTGTTATCGGGCGCCTCGGCGGGATTAGGCGCTGGGATCGATCTCAAAGTGAATCTTAAAGATGTTTTTGGCAACGTTTTGAACTCGTTTTTCGACAAGGGAAGTGCTGCAGCTGCTGTTCTTCTCCTTGCCTTTTTCTGCACTGCCATTGTCTCAATTCTCTCTTCATTGGCCCTCATCAGAAAGCCTTGA

Protein sequence

MAASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISAAVIGAVLSLLQIALTIYHIVTKSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLKDVFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRKP

Homology

[Close]

BLAST of Lcy09g005440 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 6.9e-28
Identity = 77/167 (46.11%), Postives = 108/167 (64.67%), Query Frame = 0


Query: 2   AASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISAA 61
           A S  SR+ +L LR+LTF  + +SL+I  TN+ T+  G + EFKV  KD YSYRY+++A 
Sbjct: 14  APSMVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIG-IDEFKVRSKDFYSYRYMLAAI 73

Query: 62  VIGAVLSLLQIALTIYHI------VTKSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDL 121
             G   ++LQIALT+ HI       T  DG  +FD + DK +SY+L +GA+A  GA  +L
Sbjct: 74  AFGLTYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKEL 133

Query: 122 KVNLKDVFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRK 163
           K  L  + G   + FF+KG A+A++LLL F CTAI+S+ SS AL +K
Sbjct: 134 KTQLAGLGG---DKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of Lcy09g005440 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26
Identity = 75/163 (46.01%), Postives = 108/163 (66.26%), Query Frame = 0


Query: 4   SKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISAAVI 63
           S  SR+A+LILRILTFI +  SL+I  TN+ T L+  + E KV FKDVY+YRY+++  VI
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTAT-LELDLVEVKVHFKDVYAYRYMLATIVI 66

Query: 64  GAVLSLLQIALTIYHIVT-----KSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVN 123
           G   ++LQIA T+Y++ T       DG   FD F DK +SY+L++GA+AG  +  D    
Sbjct: 67  GLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKD---- 126

Query: 124 LKDVFGNV--LNSFFDKGSAAAAVLLLAFFCTAIVSILSSLAL 160
           +K VF      ++F +KG A+A++LL+ F CTA++S+ SS AL
Sbjct: 127 IKPVFSGSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of Lcy09g005440 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-23
Identity = 71/168 (42.26%), Postives = 107/168 (63.69%), Query Frame = 0


Query: 2   AASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVE--FKDVYSYRYLIS 61
           ++S GSR   L+LR+LTF+ + I+L++ A     ++K T  E  VE  F D+Y+YRY+IS
Sbjct: 12  SSSTGSRTVLLLLRVLTFVFLLIALILIA-----IVKQTDDETGVEIKFNDIYAYRYMIS 71

Query: 62  AAVIGAVLSLLQIALTIYHIVT-----KSDGTPLFDLFSDKFLSYLLLSGASAGLGAGID 121
             +IG   +LLQ+AL+I+ +V+       DG  LFD F DK +SYLL+SG++AG G  ++
Sbjct: 72  TIIIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVE 131

Query: 122 LKVNLKDVFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRK 163
           L   +        NSF DK +A+A++LL+AF  TA+ S  +S AL +K
Sbjct: 132 LGRGVPS------NSFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of Lcy09g005440 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.4e-20
Identity = 62/161 (38.51%), Postives = 100/161 (62.11%), Query Frame = 0


Query: 8   RIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISAAVIGAVL 67
           ++  L+LR+LT + + I+L+I +TNS T++       K  FKDVY+YRY++SAAVIG V 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIV-SQGSALKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALTIYHIVT--KSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLKDVFG- 127
           +++Q+  TI    T  K+      D + DK +SYL+ +G++AG G   DLK     +   
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRK 163
              + ++ FF KG A+A++LL AF C A++S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Lcy09g005440 vs. ExPASy Swiss-Prot
Match: D7LD59 (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.9e-20
Identity = 62/165 (37.58%), Postives = 103/165 (62.42%), Query Frame = 0


Query: 8   RIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISAAVIGAVL 67
           +++ L+LR+LT + + I+L+I +TNS T++       K  FKDVY+YRY++SAAVIG + 
Sbjct: 14  KVSLLLLRVLTGVFLVIALIILSTNSVTIV-SQGSALKFHFKDVYAYRYMLSAAVIGLLY 73

Query: 68  SLLQIALTIYHIVT--KSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLKDVF-- 127
           +++Q+  TI    T  K+      D + DK +SYL+ +G++AG G   D    LKD F  
Sbjct: 74  AVIQLFFTISEFATGMKNPFNYQLDFYGDKLISYLVATGSAAGFGVSKD----LKDAFIA 133

Query: 128 ------GNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRK 163
                  + ++ FF +G A+A++LL +F C A++S+ SSLA+ ++
Sbjct: 134 LVALDSTDPVDKFFSRGYASASLLLFSFICLAVLSVFSSLAIAKR 173

[Close]

BLAST of Lcy09g005440 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.2e-64
Identity = 136/163 (83.44%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISA 60
           MAASKGSRIASLILRILTF+LIFISLLI ATNSKTVLKGT  E KVEFKDVYSYRYL +A
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  AVIGAVLSLLQIALTIYHIVTKSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLK 120
           AVIGA LSLLQIALT+YH+VTKSDGTP FD+FSDK L+YLLLSGASAGLGAGIDL+ N K
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 DVFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRKP 164
           D+ GN+ NSFFDKGSA+AA+LLLAF C+A+VSILSSLAL+RKP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of Lcy09g005440 vs. ExPASy TrEMBL
Match: A0A6J1JJD2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.7e-58
Identity = 130/163 (79.75%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISA 60
           M  SKGSRIASLILRILTFILIFISLLINATNSKT+ KG   E K +FKDVYSYRYLIS 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  AVIGAVLSLLQIALTIYHIVTKSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLK 120
            +IGAVLSLLQIAL IY++VTKS  T LFD+FSDK LSYLLLSGASAGLGAGIDL+V LK
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DVFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRKP 164
           ++ GN+LNSF DKG+A+AAVLLLAF C A+VSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of Lcy09g005440 vs. ExPASy TrEMBL
Match: A0A6J1GRM4 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 130/163 (79.75%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISA 60
           M  SKGSRIASLILRILTFILIFISL+INATNSKT  KG   E   +FKDVYSYRYLIS 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60

Query: 61  AVIGAVLSLLQIALTIYHIVTKSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLK 120
            VIGAVLSLLQIAL IY++VTKS  T LFD+FSDK LSYLLLSGASAGLGAGIDL+V LK
Sbjct: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DVFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRKP 164
           ++ GN+LNSFFDKG+A+AAVLLLAF C A+VSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of Lcy09g005440 vs. ExPASy TrEMBL
Match: A0A6J1HET3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 7.4e-57
Identity = 125/163 (76.69%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISA 60
           MAASKGSRIASLILRILTFILIFISL+INATNSKT+ KGT  E K+EFK+VYSYRYLI+A
Sbjct: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGAVLSLLQIALTIYHIVTKSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLK 120
           AVIG VLSL+QI L+IYH+VTKS+GTPLF LFSD  LSYLLLS +SA LGAGID++ NLK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120

Query: 121 DVFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRKP 164
           ++FG + +SFFD+GS AAAVL +AF C A+VSILS+LALIRKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 163

[Close]

BLAST of Lcy09g005440 vs. ExPASy TrEMBL
Match: A0A6J1JSF8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.4e-55
Identity = 123/163 (75.46%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISA 60
           MAASKGSRIA+LILRILT ILIFISL+INA+NSKT+ KGT  E K+EFK+VYSYRYLI+A
Sbjct: 1   MAASKGSRIATLILRILTLILIFISLIINASNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGAVLSLLQIALTIYHIVTKSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLK 120
           AVIG VLSL+QI L+IYH+VTKS+GTPLF LFSD  LSYLLLS +SA LGAGID + NLK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDTRANLK 120

Query: 121 DVFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRKP 164
           ++FG + +SFFD+GS AAAVLL+AF C A+VSILS+LALIRKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLLIAFICAAVVSILSALALIRKP 163

[Close]

BLAST of Lcy09g005440 vs. NCBI nr
Match: XP_022134193.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 136/163 (83.44%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISA 60
           MAASKGSRIASLILRILTF+LIFISLLI ATNSKTVLKGT  E KVEFKDVYSYRYL +A
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  AVIGAVLSLLQIALTIYHIVTKSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLK 120
           AVIGA LSLLQIALT+YH+VTKSDGTP FD+FSDK L+YLLLSGASAGLGAGIDL+ N K
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 DVFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRKP 164
           D+ GN+ NSFFDKGSA+AA+LLLAF C+A+VSILSSLAL+RKP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of Lcy09g005440 vs. NCBI nr
Match: XP_038877614.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 2.7e-61
Identity = 133/161 (82.61%), Postives = 145/161 (90.06%), Query Frame = 0


Query: 3   ASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISAAV 62
           ASKGSRIASLILRILTFILIF++LLI ATNSKTVL+GTV E K+EFKDV SYRYL++ AV
Sbjct: 2   ASKGSRIASLILRILTFILIFVALLIIATNSKTVLEGTVNETKIEFKDVNSYRYLVAVAV 61

Query: 63  IGAVLSLLQIALTIYHIVTKSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLKDV 122
           IG  LSLLQIA TIYH+VTK DGTPLFDLFSDK LSYLLLSGASAGLGAGID++VN K++
Sbjct: 62  IGGALSLLQIAFTIYHLVTKGDGTPLFDLFSDKLLSYLLLSGASAGLGAGIDMRVNFKEL 121

Query: 123 FGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRKP 164
            GN  NSFFDKGSAAAA+LLLAF C AIVSILSSLALIRKP
Sbjct: 122 VGNFFNSFFDKGSAAAAILLLAFICAAIVSILSSLALIRKP 162

[Close]

BLAST of Lcy09g005440 vs. NCBI nr
Match: XP_023525049.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-57
Identity = 130/163 (79.75%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISA 60
           M  SKGSRIASLILRILTFILIFISL+INATNSKT  KG   E K +FKDVYSYRYLIS 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLIST 60

Query: 61  AVIGAVLSLLQIALTIYHIVTKSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLK 120
            +IGAVLSLLQIAL IY++VTKS  T LFD+FSDK LSYLLLSGASAGLGAGIDL+V LK
Sbjct: 61  MIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DVFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRKP 164
           ++ GN+LNSFFDKG+A+AAVLLLAF C A+VSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of Lcy09g005440 vs. NCBI nr
Match: XP_022990642.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 233.0 bits (593), Expect = 1.8e-57
Identity = 130/163 (79.75%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISA 60
           M  SKGSRIASLILRILTFILIFISLLINATNSKT+ KG   E K +FKDVYSYRYLIS 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  AVIGAVLSLLQIALTIYHIVTKSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLK 120
            +IGAVLSLLQIAL IY++VTKS  T LFD+FSDK LSYLLLSGASAGLGAGIDL+V LK
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DVFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRKP 164
           ++ GN+LNSF DKG+A+AAVLLLAF C A+VSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of Lcy09g005440 vs. NCBI nr
Match: XP_022954145.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 231.9 bits (590), Expect = 4.0e-57
Identity = 130/163 (79.75%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISA 60
           M  SKGSRIASLILRILTFILIFISL+INATNSKT  KG   E   +FKDVYSYRYLIS 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60

Query: 61  AVIGAVLSLLQIALTIYHIVTKSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLK 120
            VIGAVLSLLQIAL IY++VTKS  T LFD+FSDK LSYLLLSGASAGLGAGIDL+V LK
Sbjct: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DVFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRKP 164
           ++ GN+LNSFFDKG+A+AAVLLLAF C A+VSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of Lcy09g005440 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21
Identity = 62/161 (38.51%), Postives = 100/161 (62.11%), Query Frame = 0


Query: 8   RIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISAAVIGAVL 67
           ++  L+LR+LT + + I+L+I +TNS T++       K  FKDVY+YRY++SAAVIG V 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIV-SQGSALKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALTIYHIVT--KSDGTPLFDLFSDKFLSYLLLSGASAGLGAGIDLKVNLKDVFG- 127
           +++Q+  TI    T  K+      D + DK +SYL+ +G++AG G   DLK     +   
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRK 163
              + ++ FF KG A+A++LL AF C A++S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Lcy09g005440 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 98.2 bits (243), Expect = 6.4e-21
Identity = 65/162 (40.12%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 8   RIASLILRILTFILIFISLLINATNSKTVLKGTVGEFKVEFKDVYSYRYLISAAVIGAVL 67
           R   L+LR+LT   + I++++ +TN+ T L+ +    K+ F DVY+YRY++SAAVIG V 
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVT-LEISSTSIKLPFNDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALTIYHIVTKSDG--TPLFDLFSDKFLSYLLLSGASAGLGAGIDLK----VNLKD 127
           +++Q+ LTI    T      T  FD + DK +SYLL +G++AG G   DLK      ++ 
Sbjct: 74  AVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEF 133

Query: 128 VFGNVLNSFFDKGSAAAAVLLLAFFCTAIVSILSSLALIRKP 164
              + ++ FF KG A+A++LL AF   A++S+ SSLAL ++P
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

The following BLAST results are available for this feature:

BLAST of Lcy09g005440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9NBE5	6.9e-28	46.11	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
B9SXY8	2.2e-26	46.01	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
C6T1Z6	1.0e-23	42.26	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q56X75	2.4e-20	38.51	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]
D7LD59	6.9e-20	37.58	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of Lcy09g005440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1A4	6.2e-64	83.44	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]
A0A6J1JJD2	8.7e-58	79.75	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1	[more]
A0A6J1GRM4	1.9e-57	79.75	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1	[more]
A0A6J1HET3	7.4e-57	76.69	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1	[more]
A0A6J1JSF8	1.4e-55	75.46	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1	[more]

BLAST of Lcy09g005440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134193.1	1.3e-63	83.44	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_038877614.1	2.7e-61	82.61	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_023525049.1	1.4e-57	79.75	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022990642.1	1.8e-57	79.75	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_022954145.1	4.0e-57	79.75	CASP-like protein 4D1 [Cucurbita moschata]	[more]

BLAST of Lcy09g005440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39518.1	1.7e-21	38.51	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	6.4e-21	40.12	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..147 e-value: 3.3E-24 score: 85.4
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 4..162
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 4..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g005440.1	Lcy09g005440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding