Lcy09g005000 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g005000
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CRM domain-containing protein
Location	Chr09: 4435142 .. 4436911 (+)
RNA-Seq Expression	Lcy09g005000
Synteny	Lcy09g005000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGCTGCTACTCGAAGACTCTGTTTCACTAGGGTTTCTACTCTCCTCCTATCCAATCGCTACAAGTATATATTCTCTCTCTCTCTCTATCTGTTGCGTTTAATTCCTTAGTGAACTGAAGTGAATTTGGTTCTTGTTTCCATGTCGTGGTTTCTGTTATACTTTCCAATCTTTTGTTTTAGTTTTAGTGGAGCCAGTTTTGCACTTCGTCTCTATGGCAGTCATTCAACTACCAATTCCTTTTTATATATTTGACTTCTTCCTATATTTTATTTGATAACCCCAATGAATTTCGTTAATTTCAGTTTTCTCCTGTGTTCTTTTATTTTCCTTGTTAAGACATTTATACAGCTAGAAAAAAACTCGCCTTCTCCTCATAGTTTATGCTTGTATTCTCTTTTCGTTCCCTTTTGATGTGTCCGTTCTGCTATTGCTTATGGAAGTTATCTCTCCTGGAAATTTTCTCAGAGCGAATGTTTGGTTTTCTTTTAAAAAATCATGATTTTAGATATGATGCTCTTTCAAAGTTAAGTTCATTTGTACTGCTGTTCTCATGTACTAAGCAATCAATTGGATGCATACTTTTATTCTGTGAGTATTGTTCCTCGACACGGATCCAAGGCATTTAGATGTAGTAGCATCCACTTTGTCCAATGCAGTTTGAATGTAGATTCTGATAAGATGGGTTTTTCTCTTTTTATGTGTGCAGCAATGTCATATCATTAACAGATTTTCATTCAGAGGTTGCTTCGTGCAATGTGGCCCATAGAAGCATTCGTGGTGAATATATACTATCTTCTACATCTAAGGTTGTTGATCCTTTCAATGGGTTGTCCCGTTATATGTCAACATCGAAGGGAAGGAGTATGCGTAGTAAGGTGGAGAGAAGAATGCGAAAGGAGTCTGGTAAAACCTTAAGGGAGATTCGAAGAGCTAAGAAAATAAAGAAAAAGCTGATGACGGAGGAAGAAAGGCTCCTTTACAACCTCAAAAGAGTATGTCATTTACAAGTTTATAATCCATGTTGCTGATTTTGATGATATAGATTTTTTACATATGTTTTTTATTTAAAGTCTTGGATGATTAGCAAATTTATTTTTGTTGTAGCCATAGGACACTATAATCTAAATGCATATTTGTGATTGAAGAGATTCACTTATGAAGTATAGCCCTTTTATGGGAAATTTGAATTTAGTTTACATCTGATGTTCAATTTAAGTTAAAGGCATTACACTTCGGAATCCTTTGGATTGAATTTAAATTTGATCAATTAATTGCACCTCGTTTTTCACATATCTTTCACAGGCCAAGAAGAAAGTAGCATTACTTTTACAACAACTTAAGAAGTATGAGCTACCAGAGTTGCCACCCCCTCGTCATGACCCTGAGCTCTTGACCCCCGAACAGCTTCAAGCTTATAAAAAAATAGGCTTTAGAAATAAAAATTACGTCCCAGTTGGTGTTCGTGGAGTGTTTGGAGGAGTGGTCCAGAATATGCATCTTCACTGGAAGTTTCATGAGACTGTGCAAGTGTGTTGTGATAACTTCCCCAAAGAAAAAATCAAGGAAATGGCAACCATGCTTGCAAGACTCAGTGGTGGAATTGTGGTGAATATACATAATGTGAAAACAATCATCATGTTTCGTGGAAGAAACTATCGTCAACCTAAAAATTTGATACCCATCAACACCCTTACGAAGAGAAAGGTGCACCTGCTTGATCACAGTGCTTATTTCTTCAGTTTCGCTGCCTTATTTTTTAAATAA

mRNA sequence

ATGTTCGCTGCTACTCGAAGACTCTGTTTCACTAGGGTTTCTACTCTCCTCCTATCCAATCGCTACAACAATGTCATATCATTAACAGATTTTCATTCAGAGGTTGCTTCGTGCAATGTGGCCCATAGAAGCATTCGTGGTGAATATATACTATCTTCTACATCTAAGGTTGTTGATCCTTTCAATGGGTTGTCCCGTTATATGTCAACATCGAAGGGAAGGAGTATGCGTAGTAAGGTGGAGAGAAGAATGCGAAAGGAGTCTGGTAAAACCTTAAGGGAGATTCGAAGAGCTAAGAAAATAAAGAAAAAGCTGATGACGGAGGAAGAAAGGCTCCTTTACAACCTCAAAAGAGCCAAGAAGAAAGTAGCATTACTTTTACAACAACTTAAGAAGTATGAGCTACCAGAGTTGCCACCCCCTCGTCATGACCCTGAGCTCTTGACCCCCGAACAGCTTCAAGCTTATAAAAAAATAGGCTTTAGAAATAAAAATTACGTCCCAGTTGGTGTTCGTGGAGTGTTTGGAGGAGTGGTCCAGAATATGCATCTTCACTGGAAGTTTCATGAGACTGTGCAAGTGTGTTGTGATAACTTCCCCAAAGAAAAAATCAAGGAAATGGCAACCATGCTTGCAAGACTCAGTGGTGGAATTGTGGTGAATATACATAATGTGAAAACAATCATCATGTTTCGTGGAAGAAACTATCGTCAACCTAAAAATTTGATACCCATCAACACCCTTACGAAGAGAAAGGTGCACCTGCTTGATCACAGTGCTTATTTCTTCAGTTTCGCTGCCTTATTTTTTAAATAA

Coding sequence (CDS)

ATGTTCGCTGCTACTCGAAGACTCTGTTTCACTAGGGTTTCTACTCTCCTCCTATCCAATCGCTACAACAATGTCATATCATTAACAGATTTTCATTCAGAGGTTGCTTCGTGCAATGTGGCCCATAGAAGCATTCGTGGTGAATATATACTATCTTCTACATCTAAGGTTGTTGATCCTTTCAATGGGTTGTCCCGTTATATGTCAACATCGAAGGGAAGGAGTATGCGTAGTAAGGTGGAGAGAAGAATGCGAAAGGAGTCTGGTAAAACCTTAAGGGAGATTCGAAGAGCTAAGAAAATAAAGAAAAAGCTGATGACGGAGGAAGAAAGGCTCCTTTACAACCTCAAAAGAGCCAAGAAGAAAGTAGCATTACTTTTACAACAACTTAAGAAGTATGAGCTACCAGAGTTGCCACCCCCTCGTCATGACCCTGAGCTCTTGACCCCCGAACAGCTTCAAGCTTATAAAAAAATAGGCTTTAGAAATAAAAATTACGTCCCAGTTGGTGTTCGTGGAGTGTTTGGAGGAGTGGTCCAGAATATGCATCTTCACTGGAAGTTTCATGAGACTGTGCAAGTGTGTTGTGATAACTTCCCCAAAGAAAAAATCAAGGAAATGGCAACCATGCTTGCAAGACTCAGTGGTGGAATTGTGGTGAATATACATAATGTGAAAACAATCATCATGTTTCGTGGAAGAAACTATCGTCAACCTAAAAATTTGATACCCATCAACACCCTTACGAAGAGAAAGGTGCACCTGCTTGATCACAGTGCTTATTTCTTCAGTTTCGCTGCCTTATTTTTTAAATAA

Protein sequence

MFAATRRLCFTRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIRGEYILSSTSKVVDPFNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPKNLIPINTLTKRKVHLLDHSAYFFSFAALFFK

Homology

[Close]

BLAST of Lcy09g005000 vs. ExPASy Swiss-Prot
Match: Q9LT57 (CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM9 PE=2 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.1e-91
Identity = 169/192 (88.02%), Postives = 184/192 (95.83%), Query Frame = 0


Query: 61  FNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120
           F G SR MSTS+GRSMRSKVE RMRKESGKTLREIRRAKK+KKKLMT+EERL+YNLKRAK
Sbjct: 5   FKGWSRGMSTSRGRSMRSKVESRMRKESGKTLREIRRAKKLKKKLMTDEERLIYNLKRAK 64

Query: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
           KKVALLLQ+LKKY+LPELP P HDPEL T EQ+QA+KKIGF+NKNYVPVGVRGVFGGVVQ
Sbjct: 65  KKVALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQ 124

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPK 240
           NMH+HWKFHETVQVCCDNFPKEKIKEMA+M+ARLSGG+V+NIHNVKTIIMFRGRNYRQPK
Sbjct: 125 NMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPK 184

Query: 241 NLIPINTLTKRK 253
           NLIP+NTLTKRK
Sbjct: 185 NLIPVNTLTKRK 196

[Close]

BLAST of Lcy09g005000 vs. ExPASy Swiss-Prot
Match: Q67XL4 (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.4e-33
Identity = 84/194 (43.30%), Postives = 123/194 (63.40%), Query Frame = 0


Query: 69  STSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKK---LMTEEERLLYNLKRAKKKVAL 128
           S+S+     +K++R+  K     +R ++  +  KKK    MT EE++L  L++A+KK   
Sbjct: 95  SSSQDGDSCTKLKRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEER 154

Query: 129 LLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLH 188
           L++ +KK E  E     HDPE+LTPE+   Y K+G + KNYVPVG RG++ GV+ NMHLH
Sbjct: 155 LMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLH 214

Query: 189 WKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPKNLIPI 248
           WK H+T+QV    F  +++KE+A  LARL+GGIV+++H   TIIM+RG+NY QP   I  
Sbjct: 215 WKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMS 274

Query: 249 NTLTKRKVHLLDHS 260
             +T  +   LD S
Sbjct: 275 PRITLPRKKALDKS 288

[Close]

BLAST of Lcy09g005000 vs. ExPASy Swiss-Prot
Match: F4J2U9 (CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM3A PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.4e-19
Identity = 62/170 (36.47%), Postives = 99/170 (58.24%), Query Frame = 0


Query: 86  KESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDP 145
           K+  + LR     +K+++KL   E +LL   +R   KV + L+  ++         R DP
Sbjct: 586 KQEVEILRHENLVRKLERKLAFAERKLL-KAERGLAKVEVCLKPAEQ---------REDP 645

Query: 146 ELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIK 205
           E +T E+   ++K+G + K ++ +G RGVF G V+NMHLHWK+ E V++       + +K
Sbjct: 646 ESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVK 705

Query: 206 EMATMLARLSGGIVVNIHNVK---TIIMFRGRNYRQPKNLIPINTLTKRK 253
           ++A  L   SGGI+V+I  V     II++RG++Y++P  L P N LTKRK
Sbjct: 706 KVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRK 745

[Close]

BLAST of Lcy09g005000 vs. ExPASy Swiss-Prot
Match: F4JVH1 (CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CFM3B PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.3e-18
Identity = 57/170 (33.53%), Postives = 101/170 (59.41%), Query Frame = 0


Query: 86  KESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDP 145
           K+  + +R  +  +K+++KL   E++LL    +A++ +A + + LK  E       R D 
Sbjct: 613 KQEVEKVRSAKLVRKLERKLAFAEKKLL----KAERALAKVEESLKPAE------QRTDL 672

Query: 146 ELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIK 205
           E +T E+   ++K+G + K ++ +G RGVF G V+NMHLHWK+ E +++       E  +
Sbjct: 673 EGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQ 732

Query: 206 EMATMLARLSGGIVVNIHNVK---TIIMFRGRNYRQPKNLIPINTLTKRK 253
           ++A  L   SGGI+V++  +     +I++RG++Y++P  L P N LTKRK
Sbjct: 733 KVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRK 772

[Close]

BLAST of Lcy09g005000 vs. ExPASy Swiss-Prot
Match: A7XN92 (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays OX=4577 GN=CFM3 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.4e-17
Identity = 67/200 (33.50%), Postives = 103/200 (51.50%), Query Frame = 0


Query: 78  SKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPE 137
           +K +     +  +T+   R A  ++K        L + L  A+KK+    + L K E   
Sbjct: 521 TKHDENHADKMARTIEAARHADLVRK--------LEWKLSLAQKKMEKAERVLGKVETAL 580

Query: 138 LP-PPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCC 197
            P      PE +T E+   ++K+G R K ++ +G RGVF G ++NMHLHWK+ E V++  
Sbjct: 581 RPTEDSRPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILV 640

Query: 198 DNFPKEKIKEMATMLARLSGGIVVNIHNVK---TIIMFRGRNYRQPKNLIPINTLTKRK- 257
                  +K +A  L   SGGI+V++  V     I++FRG+NYR+P +L P N L+KRK 
Sbjct: 641 KAKSFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKA 700

Query: 258 ----VHLLDHSAYFFSFAAL 269
               + L  H A    FA L
Sbjct: 701 LARSIELQRHQALSRHFAKL 712

[Close]

BLAST of Lcy09g005000 vs. ExPASy TrEMBL
Match: A0A6J1JQP1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487475 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.6e-125
Identity = 236/252 (93.65%), Postives = 243/252 (96.43%), Query Frame = 0


Query: 1   MFAATRRLCFTRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIRGEYILSSTSKVVDP 60
           MF+ATRRLCFTRVSTLLLSNRYNNV+SL DFHSE+AS NVA RSIR EY+L S SKVV  
Sbjct: 1   MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVLPSKSKVVGS 60

Query: 61  FNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120
           +NGLSR MSTS+GRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK
Sbjct: 61  YNGLSRCMSTSRGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120

Query: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
           KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ
Sbjct: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPK 240
           NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVN+HNVKTIIMFRGRNYRQPK
Sbjct: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240

Query: 241 NLIPINTLTKRK 253
           NLIPINTLTKRK
Sbjct: 241 NLIPINTLTKRK 252

[Close]

BLAST of Lcy09g005000 vs. ExPASy TrEMBL
Match: A0A6J1HHB1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464059 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.8e-124
Identity = 235/252 (93.25%), Postives = 240/252 (95.24%), Query Frame = 0


Query: 1   MFAATRRLCFTRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIRGEYILSSTSKVVDP 60
           MF+ATRRLCFTRVSTLLLSNRYNNV+SL DFHSE+AS NVA RSIR EY+  S  KVV  
Sbjct: 1   MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVFPSKWKVVGS 60

Query: 61  FNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120
           FNGLSR MSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK
Sbjct: 61  FNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120

Query: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
           KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ
Sbjct: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPK 240
           NMHLHWKFHETVQVCCDNFPKEKIKEMA MLARLSGGIVVN+HNVKTIIMFRGRNYRQPK
Sbjct: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240

Query: 241 NLIPINTLTKRK 253
           NLIPINTLTKRK
Sbjct: 241 NLIPINTLTKRK 252

[Close]

BLAST of Lcy09g005000 vs. ExPASy TrEMBL
Match: A0A1S3C9B5 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498113 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.9e-122
Identity = 234/253 (92.49%), Postives = 238/253 (94.07%), Query Frame = 0


Query: 1   MFAATRRL-CFTRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIRGEYILSSTSKVVD 60
           M AATRRL CF+RVS LLLSNRYNNVI LTD +SE   CNVAHR I GEY+L STSKVV 
Sbjct: 1   MLAATRRLCCFSRVSNLLLSNRYNNVILLTDLNSETVPCNVAHRIIHGEYVLPSTSKVVG 60

Query: 61  PFNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRA 120
           PFNGL R MSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRA
Sbjct: 61  PFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRA 120

Query: 121 KKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVV 180
           KKKVALLLQQLKKYELPELPPPRHDPELLT EQLQAYKKIGFRNKNYVPVGVRGVFGGVV
Sbjct: 121 KKKVALLLQQLKKYELPELPPPRHDPELLTAEQLQAYKKIGFRNKNYVPVGVRGVFGGVV 180

Query: 181 QNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQP 240
           QNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVN+HNVKTIIMFRGRNYRQP
Sbjct: 181 QNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNVHNVKTIIMFRGRNYRQP 240

Query: 241 KNLIPINTLTKRK 253
           KNLIPINTLTKRK
Sbjct: 241 KNLIPINTLTKRK 253

[Close]

BLAST of Lcy09g005000 vs. ExPASy TrEMBL
Match: A0A6J1BYA8 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006561 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.1e-121
Identity = 235/254 (92.52%), Postives = 242/254 (95.28%), Query Frame = 0


Query: 1   MFAA-TRRLCFTRVSTLLLSNRYNNVISLTDFHSEVA-SCNVAHRSIRGEYILSSTSKVV 60
           MF+A  RRL   RVSTLLLSNR+NNV+SLTDFHS+VA SCNVAHRSIRGEY+L  T+ VV
Sbjct: 1   MFSAPLRRLSSNRVSTLLLSNRFNNVVSLTDFHSDVASSCNVAHRSIRGEYVLPCTTNVV 60

Query: 61  DPFNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKR 120
            PFNG+SR MSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKR
Sbjct: 61  GPFNGVSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKR 120

Query: 121 AKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGV 180
           AKKKVALLLQQLKKYELPELP PRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGV
Sbjct: 121 AKKKVALLLQQLKKYELPELPSPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGV 180

Query: 181 VQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQ 240
           VQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQ
Sbjct: 181 VQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQ 240

Query: 241 PKNLIPINTLTKRK 253
           PKNLIPINTLTKRK
Sbjct: 241 PKNLIPINTLTKRK 254

[Close]

BLAST of Lcy09g005000 vs. ExPASy TrEMBL
Match: A0A0A0KSD9 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G522980 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 5.4e-121
Identity = 232/253 (91.70%), Postives = 238/253 (94.07%), Query Frame = 0


Query: 1   MFAATRRLC-FTRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIRGEYILSSTSKVVD 60
           M AATRR C F+RVS LLLSNRYN+VI  TD +SE  SCNV HRSI GEY+L STSKVV 
Sbjct: 1   MLAATRRFCSFSRVSNLLLSNRYNSVILSTDCNSEAVSCNVGHRSIHGEYVLPSTSKVVG 60

Query: 61  PFNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRA 120
           PFNGL R MSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRA
Sbjct: 61  PFNGLVRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRA 120

Query: 121 KKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVV 180
           KKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRN+NYVPVGVRGVFGGVV
Sbjct: 121 KKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNRNYVPVGVRGVFGGVV 180

Query: 181 QNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQP 240
           QNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIH+VKTIIMFRGRNYRQP
Sbjct: 181 QNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHDVKTIIMFRGRNYRQP 240

Query: 241 KNLIPINTLTKRK 253
           KNLIPINTLTKRK
Sbjct: 241 KNLIPINTLTKRK 253

[Close]

BLAST of Lcy09g005000 vs. NCBI nr
Match: XP_038890903.1 (CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida])

HSP 1 Score: 466.5 bits (1199), Expect = 1.6e-127
Identity = 242/252 (96.03%), Postives = 245/252 (97.22%), Query Frame = 0


Query: 1   MFAATRRLCFTRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIRGEYILSSTSKVVDP 60
           M AATRRLCF+RVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSI GEYIL STSKVV P
Sbjct: 1   MLAATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGEYILPSTSKVVGP 60

Query: 61  FNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120
           FNG  R MSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK
Sbjct: 61  FNGSFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120

Query: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
           KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ
Sbjct: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPK 240
           NMHLHWKFHETVQVCCDNFPKEKIKEMA+MLARLSGGIVVNIH+VKTIIMFRGRNYRQPK
Sbjct: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMASMLARLSGGIVVNIHDVKTIIMFRGRNYRQPK 240

Query: 241 NLIPINTLTKRK 253
           NLIPINTLTKRK
Sbjct: 241 NLIPINTLTKRK 252

[Close]

BLAST of Lcy09g005000 vs. NCBI nr
Match: XP_023550703.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 457.6 bits (1176), Expect = 7.5e-125
Identity = 237/252 (94.05%), Postives = 242/252 (96.03%), Query Frame = 0


Query: 1   MFAATRRLCFTRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIRGEYILSSTSKVVDP 60
           MF+ATRRLCFTRVSTLLLSNRYNNV+SL DFHSE+AS NVA RSIR EY+L S SKVV  
Sbjct: 1   MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVLPSKSKVVGS 60

Query: 61  FNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120
           FNGLSR MSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK
Sbjct: 61  FNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120

Query: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
           KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ
Sbjct: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPK 240
           NMHLHWKFHETVQVCCDNFPKEKIKEMA MLARLSGGIVVN+HNVKTIIMFRGRNYRQPK
Sbjct: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240

Query: 241 NLIPINTLTKRK 253
           NLIPINTLTKRK
Sbjct: 241 NLIPINTLTKRK 252

[Close]

BLAST of Lcy09g005000 vs. NCBI nr
Match: XP_022990655.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima])

HSP 1 Score: 457.6 bits (1176), Expect = 7.5e-125
Identity = 236/252 (93.65%), Postives = 243/252 (96.43%), Query Frame = 0


Query: 1   MFAATRRLCFTRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIRGEYILSSTSKVVDP 60
           MF+ATRRLCFTRVSTLLLSNRYNNV+SL DFHSE+AS NVA RSIR EY+L S SKVV  
Sbjct: 1   MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVLPSKSKVVGS 60

Query: 61  FNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120
           +NGLSR MSTS+GRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK
Sbjct: 61  YNGLSRCMSTSRGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120

Query: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
           KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ
Sbjct: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPK 240
           NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVN+HNVKTIIMFRGRNYRQPK
Sbjct: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240

Query: 241 NLIPINTLTKRK 253
           NLIPINTLTKRK
Sbjct: 241 NLIPINTLTKRK 252

[Close]

BLAST of Lcy09g005000 vs. NCBI nr
Match: KAG6602411.1 (CRM-domain containing factor CFM9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 456.1 bits (1172), Expect = 2.2e-124
Identity = 236/252 (93.65%), Postives = 241/252 (95.63%), Query Frame = 0


Query: 1   MFAATRRLCFTRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIRGEYILSSTSKVVDP 60
           MF+ATRRLCFTRVSTLLLSNRYNNV+SL DFHSE+AS NVA RSIR EY+  S SKVV  
Sbjct: 1   MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVFPSKSKVVGS 60

Query: 61  FNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120
           FNGLSR MSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK
Sbjct: 61  FNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120

Query: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
           KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ
Sbjct: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPK 240
           NMHLHWKFHETVQVCCDNFPKEKIKEMA MLARLSGGIVVN+HNVKTIIMFRGRNYRQPK
Sbjct: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240

Query: 241 NLIPINTLTKRK 253
           NLIPINTLTKRK
Sbjct: 241 NLIPINTLTKRK 252

[Close]

BLAST of Lcy09g005000 vs. NCBI nr
Match: KAG7033088.1 (putative CRM domain-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 456.1 bits (1172), Expect = 2.2e-124
Identity = 236/252 (93.65%), Postives = 241/252 (95.63%), Query Frame = 0


Query: 1   MFAATRRLCFTRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIRGEYILSSTSKVVDP 60
           MF+ATRRLCFTRVSTLLLSNRYNNV+SL DFHSE+AS NVA RSIR EY+  S SKVV  
Sbjct: 1   MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVFPSKSKVVGS 60

Query: 61  FNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120
           FNGLSR MSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK
Sbjct: 61  FNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120

Query: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
           KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ
Sbjct: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPK 240
           NMHLHWKFHETVQVCCDNFPKEKIKEMA MLARLSGGIVVN+HNVKTIIMFRGRNYRQPK
Sbjct: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240

Query: 241 NLIPINTLTKRK 253
           NLIPINTLTKRK
Sbjct: 241 NLIPINTLTKRK 252

[Close]

BLAST of Lcy09g005000 vs. TAIR 10
Match: AT3G27550.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 337.8 bits (865), Expect = 8.0e-93
Identity = 169/192 (88.02%), Postives = 184/192 (95.83%), Query Frame = 0


Query: 61  FNGLSRYMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAK 120
           F G SR MSTS+GRSMRSKVE RMRKESGKTLREIRRAKK+KKKLMT+EERL+YNLKRAK
Sbjct: 5   FKGWSRGMSTSRGRSMRSKVESRMRKESGKTLREIRRAKKLKKKLMTDEERLIYNLKRAK 64

Query: 121 KKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
           KKVALLLQ+LKKY+LPELP P HDPEL T EQ+QA+KKIGF+NKNYVPVGVRGVFGGVVQ
Sbjct: 65  KKVALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQ 124

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPK 240
           NMH+HWKFHETVQVCCDNFPKEKIKEMA+M+ARLSGG+V+NIHNVKTIIMFRGRNYRQPK
Sbjct: 125 NMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPK 184

Query: 241 NLIPINTLTKRK 253
           NLIP+NTLTKRK
Sbjct: 185 NLIPVNTLTKRK 196

[Close]

BLAST of Lcy09g005000 vs. TAIR 10
Match: AT2G28480.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 146.0 bits (367), Expect = 4.5e-35
Identity = 81/185 (43.78%), Postives = 119/185 (64.32%), Query Frame = 0


Query: 70  TSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQ 129
           T K   ++ K ER  R  + +        K  KKK +  EER+ Y L++AK K ALL+++
Sbjct: 86  TKKRLKLKRKKEREERNAANRKDPRRLTVKGKKKKFVNAEERIKYKLEKAKIKEALLIER 145

Query: 130 LKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFH 189
           LK+YE+ ++  P   P  +T E+    KK+G +  NYVP+G RGVFGGV+ NMHLHWK H
Sbjct: 146 LKRYEVAKVQGPEVRPHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKH 205

Query: 190 ETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPKNLIPINTLT 249
           ETV+V C+N    ++++ A  LA+LSGG+ VNI    TII +RG+ Y QP+ + PI+TL+
Sbjct: 206 ETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTIIFYRGKGYVQPQVMSPIDTLS 265

Query: 250 KRKVH 255
           K++ +
Sbjct: 266 KKRAY 270

[Close]

BLAST of Lcy09g005000 vs. TAIR 10
Match: AT3G25440.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-34
Identity = 84/194 (43.30%), Postives = 123/194 (63.40%), Query Frame = 0


Query: 69  STSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKK---LMTEEERLLYNLKRAKKKVAL 128
           S+S+     +K++R+  K     +R ++  +  KKK    MT EE++L  L++A+KK   
Sbjct: 95  SSSQDGDSCTKLKRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEER 154

Query: 129 LLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLH 188
           L++ +KK E  E     HDPE+LTPE+   Y K+G + KNYVPVG RG++ GV+ NMHLH
Sbjct: 155 LMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLH 214

Query: 189 WKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPKNLIPI 248
           WK H+T+QV    F  +++KE+A  LARL+GGIV+++H   TIIM+RG+NY QP   I  
Sbjct: 215 WKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMS 274

Query: 249 NTLTKRKVHLLDHS 260
             +T  +   LD S
Sbjct: 275 PRITLPRKKALDKS 288

[Close]

BLAST of Lcy09g005000 vs. TAIR 10
Match: AT3G25440.2 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-34
Identity = 84/194 (43.30%), Postives = 123/194 (63.40%), Query Frame = 0


Query: 69  STSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKK---LMTEEERLLYNLKRAKKKVAL 128
           S+S+     +K++R+  K     +R ++  +  KKK    MT EE++L  L++A+KK   
Sbjct: 31  SSSQDGDSCTKLKRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEER 90

Query: 129 LLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLH 188
           L++ +KK E  E     HDPE+LTPE+   Y K+G + KNYVPVG RG++ GV+ NMHLH
Sbjct: 91  LMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLH 150

Query: 189 WKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPKNLIPI 248
           WK H+T+QV    F  +++KE+A  LARL+GGIV+++H   TIIM+RG+NY QP   I  
Sbjct: 151 WKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMS 210

Query: 249 NTLTKRKVHLLDHS 260
             +T  +   LD S
Sbjct: 211 PRITLPRKKALDKS 224

[Close]

BLAST of Lcy09g005000 vs. TAIR 10
Match: AT4G13070.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-31
Identity = 76/169 (44.97%), Postives = 109/169 (64.50%), Query Frame = 0


Query: 85  RKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHD 144
           RK     LR  R   K K      E R+ Y L++AK+K   L+++L+KY++P+ P   +D
Sbjct: 119 RKAKVNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKEEWLIEKLRKYDVPKSPAEPYD 178

Query: 145 PELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKE-K 204
           PE LT E+    K+ G + KN+V VG RGVFGGVV N+HLHWK HETV+V C    K  +
Sbjct: 179 PESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQ 238

Query: 205 IKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQPKNLIPINTLTKRK 253
           + E A  LARLS GIV+++    TI+++RG+NY +P+ + P++TL+K K
Sbjct: 239 VHEYAEELARLSKGIVIDVKPNNTIVLYRGKNYVRPEVMSPVDTLSKDK 287

The following BLAST results are available for this feature:

BLAST of Lcy09g005000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT57	1.1e-91	88.02	CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q67XL4	2.4e-33	43.30	Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabid...	[more]
F4J2U9	3.4e-19	36.47	CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis t...	[more]
F4JVH1	6.3e-18	33.53	CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
A7XN92	1.4e-17	33.50	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays OX=45...	[more]

BLAST of Lcy09g005000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQP1	3.6e-125	93.65	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb...	[more]
A0A6J1HHB1	6.8e-124	93.25	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb...	[more]
A0A1S3C9B5	4.9e-122	92.49	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucumi...	[more]
A0A6J1BYA8	1.1e-121	92.52	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Momord...	[more]
A0A0A0KSD9	5.4e-121	91.70	CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G522980 PE=4 SV...	[more]

BLAST of Lcy09g005000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890903.1	1.6e-127	96.03	CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida]	[more]
XP_023550703.1	7.5e-125	94.05	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit...	[more]
XP_022990655.1	7.5e-125	93.65	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit...	[more]
KAG6602411.1	2.2e-124	93.65	CRM-domain containing factor CFM9, mitochondrial, partial [Cucurbita argyrosperm...	[more]
KAG7033088.1	2.2e-124	93.65	putative CRM domain-containing protein, chloroplastic [Cucurbita argyrosperma su...	[more]

BLAST of Lcy09g005000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27550.1	8.0e-93	88.02	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT2G28480.1	4.5e-35	43.78	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.1	1.7e-34	43.30	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.2	1.7e-34	43.30	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT4G13070.1	2.3e-31	44.97	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 102..122
None	No IPR available	PANTHER	PTHR31426:SF4	RNA-BINDING CRS1 / YHBY (CRM) DOMAIN PROTEIN	coord: 1..252
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 148..232 e-value: 1.5E-17 score: 74.3
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 148..232 e-value: 3.0E-16 score: 59.3
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 146..243 score: 18.16453
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 147..244 e-value: 3.0E-17 score: 64.4
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 147..241
IPR040286	CRM domain-containing protein At3g25440-like	PANTHER	PTHR31426	GROUP II INTRON SPLICING FACTOR CRS1-LIKE	coord: 1..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g005000.1	Lcy09g005000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding