Lcy09g004840 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g004840
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionEmsy N Terminus/ plant Tudor-like domains-containing protein isoform 1
LocationChr09: 4323786 .. 4324395 (+)
RNA-Seq ExpressionLcy09g004840
SyntenyLcy09g004840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAACAGACCCCTACCCAAAAAAAAATCTGAATCCAATCTAATAAAAACCAGATCATAATTCTCTCCAATTACAAAAAAAAAAAAAGGCACCATCTTCGCCATTTCCACTGAAGCTCAATTGAAACTCAGAGAAATGAAGAAGAAGGGTTTAAGCTCAAGTTGCAGAGCTTCATGTGGATGTGGCCTTTTTCTTCTGATTCTTATTGAAATCATCACAATCAGCTCTTCGTTCTGTTACGGCCATGAAGATTTGGAAAGAAGAAGCTTAGGAAGAAGGATAGTGGTTGATTCAATGGCGGACTCTGTTTCTGAAAGTGGAAGATCCGCCATTAAAGAGCCCAAGAAAGCTGTGGAACAGAGCTTGAGAAAGGCGCCGCCGAGCGGAGCAAATCCCATTCAGAATAAGTAGAGACGACATGTCGGAGCTTGAAATCATTAATCGGTGAAACGACGGTGGATCCATTGGAGAAGTATCAGTCGTTTTTTTTTTAATGGGATTTTTGGATTTGGTTGTTGGTTCAGATTTTTGGGTTTTTTTTTTTTTTTTTGGCTGTAAATCAGAAGTTTTTTTTAGGTGATTTTTAGTGTACAAAACTTTGCAGCTGAG

mRNA sequence

CAAAAACAGACCCCTACCCAAAAAAAAATCTGAATCCAATCTAATAAAAACCAGATCATAATTCTCTCCAATTACAAAAAAAAAAAAAGGCACCATCTTCGCCATTTCCACTGAAGCTCAATTGAAACTCAGAGAAATGAAGAAGAAGGGTTTAAGCTCAAGTTGCAGAGCTTCATGTGGATGTGGCCTTTTTCTTCTGATTCTTATTGAAATCATCACAATCAGCTCTTCGTTCTGTTACGGCCATGAAGATTTGGAAAGAAGAAGCTTAGGAAGAAGGATAGTGGTTGATTCAATGGCGGACTCTGTTTCTGAAAGTGGAAGATCCGCCATTAAAGAGCCCAAGAAAGCTGTGGAACAGAGCTTGAGAAAGGCGCCGCCGAGCGGAGCAAATCCCATTCAGAATAAGTAGAGACGACATGTCGGAGCTTGAAATCATTAATCGGTGAAACGACGGTGGATCCATTGGAGAAGTATCAGTCGTTTTTTTTTTAATGGGATTTTTGGATTTGGTTGTTGGTTCAGATTTTTGGGTTTTTTTTTTTTTTTTTGGCTGTAAATCAGAAGTTTTTTTTAGGTGATTTTTAGTGTACAAAACTTTGCAGCTGAG

Coding sequence (CDS)

ATGAAGAAGAAGGGTTTAAGCTCAAGTTGCAGAGCTTCATGTGGATGTGGCCTTTTTCTTCTGATTCTTATTGAAATCATCACAATCAGCTCTTCGTTCTGTTACGGCCATGAAGATTTGGAAAGAAGAAGCTTAGGAAGAAGGATAGTGGTTGATTCAATGGCGGACTCTGTTTCTGAAAGTGGAAGATCCGCCATTAAAGAGCCCAAGAAAGCTGTGGAACAGAGCTTGAGAAAGGCGCCGCCGAGCGGAGCAAATCCCATTCAGAATAAGTAG

Protein sequence

MKKKGLSSSCRASCGCGLFLLILIEIITISSSFCYGHEDLERRSLGRRIVVDSMADSVSESGRSAIKEPKKAVEQSLRKAPPSGANPIQNK
Homology
BLAST of Lcy09g004840 vs. ExPASy TrEMBL
Match: M5W792 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G075600 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.2e-09
Identity = 45/82 (54.88%), Postives = 56/82 (68.29%), Query Frame = 0

Query: 18 LFLLILIEIITISSSFCYGHE-----DLERRSLGRRIV---VDSMADSVSESGRSAIKEP 77
          LF LILIEI+ + SSFC  HE       ERRSL RR++   V S++ S   +   A+KEP
Sbjct: 6  LFALILIEIL-LCSSFCLCHEVKIFQGRERRSLSRRLLSIPVVSVSPSRLSTSSGAMKEP 65

Query: 78 KKAVEQSLRKAPPSGANPIQNK 92
          KKAVE S+R+ PPSG+NPIQNK
Sbjct: 66 KKAVESSMRRKPPSGSNPIQNK 86

BLAST of Lcy09g004840 vs. ExPASy TrEMBL
Match: A0A6J5VFA8 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS44578 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.2e-09
Identity = 45/82 (54.88%), Postives = 56/82 (68.29%), Query Frame = 0

Query: 18 LFLLILIEIITISSSFCYGHE-----DLERRSLGRRIV---VDSMADSVSESGRSAIKEP 77
          LF LILIEI+ + SSFC  HE       ERRSL RR++   V S++ S   +   A+KEP
Sbjct: 6  LFALILIEIL-LCSSFCLCHEVKIFQGRERRSLSRRLLSIPVVSVSPSRLSTSSGAMKEP 65

Query: 78 KKAVEQSLRKAPPSGANPIQNK 92
          KKAVE S+R+ PPSG+NPIQNK
Sbjct: 66 KKAVESSMRRKPPSGSNPIQNK 86

BLAST of Lcy09g004840 vs. ExPASy TrEMBL
Match: U5FK75 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G047700 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.7e-07
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 0

Query: 18 LFLLILIEIITISSSFCYGHED-----LERRSLGRRIVVDSMADSVSESGRSAIKEPKKA 77
          LF+LIL+ I+  SSS C  HE+      +R ++ R+++   M    ++ G   +KE KKA
Sbjct: 11 LFVLILVHILA-SSSLCLCHEESSLIPSKRSTISRKLLATPMKSRENKLGDGTMKEAKKA 70

Query: 78 VEQSLRKAPPSGANPIQN 91
          VEQSLRKAPPS +NPIQN
Sbjct: 71 VEQSLRKAPPSVSNPIQN 87

BLAST of Lcy09g004840 vs. ExPASy TrEMBL
Match: W9RRP7 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018024 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-06
Identity = 49/97 (50.52%), Postives = 58/97 (59.79%), Query Frame = 0

Query: 9   SCRASCGCGLFLLILIEIITISSSFCYGHED--LER---RS--LGRRIVVDSMADSVSES 68
           SCR S    +F+LI++E IT  SS C  HE   L+R   RS  L R+++  S   SVS S
Sbjct: 7   SCRTS--AAIFVLIIVE-ITFCSSLCLCHEQNILQRDHQRSLLLSRKLLFSSTMASVSVS 66

Query: 69  GR-------SAIKEPKKAVEQSLRKAPPSGANPIQNK 92
                    SA+KEPKKAVE SLRKAP SG NP QNK
Sbjct: 67  PNNDKLRTSSAMKEPKKAVETSLRKAPASGPNPTQNK 100

BLAST of Lcy09g004840 vs. ExPASy TrEMBL
Match: A0A5N5FYA0 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_011287 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.3e-06
Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 0

Query: 18 LFLLILIEIITISSSFCYGHE-----DLERRSLGRRIVVDSMADSVSESGRSAIKEPKKA 77
          LF LILIEI+ +  SFC   E       ER++L R++++  MA S+S S R A+KEPKKA
Sbjct: 7  LFALILIEIL-LCCSFCLCREVQIFPRRERKTLSRKLLLIPMA-SLSGSSR-AMKEPKKA 66

Query: 78 VEQSLRKAPPSGANPIQNK 92
          VE S+R+ PPS +NPIQN+
Sbjct: 67 VESSMRRKPPSTSNPIQNR 82

BLAST of Lcy09g004840 vs. NCBI nr
Match: ONH95523.1 (hypothetical protein PRUPE_7G075600 [Prunus persica] >CAB4286843.1 unnamed protein product [Prunus armeniaca] >CAB4317213.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 70.5 bits (171), Expect = 8.6e-09
Identity = 45/82 (54.88%), Postives = 56/82 (68.29%), Query Frame = 0

Query: 18 LFLLILIEIITISSSFCYGHE-----DLERRSLGRRIV---VDSMADSVSESGRSAIKEP 77
          LF LILIEI+ + SSFC  HE       ERRSL RR++   V S++ S   +   A+KEP
Sbjct: 6  LFALILIEIL-LCSSFCLCHEVKIFQGRERRSLSRRLLSIPVVSVSPSRLSTSSGAMKEP 65

Query: 78 KKAVEQSLRKAPPSGANPIQNK 92
          KKAVE S+R+ PPSG+NPIQNK
Sbjct: 66 KKAVESSMRRKPPSGSNPIQNK 86

BLAST of Lcy09g004840 vs. NCBI nr
Match: PNS97891.1 (hypothetical protein POPTR_016G047700 [Populus trichocarpa])

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 0

Query: 18 LFLLILIEIITISSSFCYGHED-----LERRSLGRRIVVDSMADSVSESGRSAIKEPKKA 77
          LF+LIL+ I+  SSS C  HE+      +R ++ R+++   M    ++ G   +KE KKA
Sbjct: 11 LFVLILVHILA-SSSLCLCHEESSLIPSKRSTISRKLLATPMKSRENKLGDGTMKEAKKA 70

Query: 78 VEQSLRKAPPSGANPIQN 91
          VEQSLRKAPPS +NPIQN
Sbjct: 71 VEQSLRKAPPSVSNPIQN 87

BLAST of Lcy09g004840 vs. NCBI nr
Match: EXB93638.1 (hypothetical protein L484_018024 [Morus notabilis])

HSP 1 Score: 62.0 bits (149), Expect = 3.1e-06
Identity = 49/97 (50.52%), Postives = 58/97 (59.79%), Query Frame = 0

Query: 9   SCRASCGCGLFLLILIEIITISSSFCYGHED--LER---RS--LGRRIVVDSMADSVSES 68
           SCR S    +F+LI++E IT  SS C  HE   L+R   RS  L R+++  S   SVS S
Sbjct: 7   SCRTS--AAIFVLIIVE-ITFCSSLCLCHEQNILQRDHQRSLLLSRKLLFSSTMASVSVS 66

Query: 69  GR-------SAIKEPKKAVEQSLRKAPPSGANPIQNK 92
                    SA+KEPKKAVE SLRKAP SG NP QNK
Sbjct: 67  PNNDKLRTSSAMKEPKKAVETSLRKAPASGPNPTQNK 100

BLAST of Lcy09g004840 vs. NCBI nr
Match: KAG2686953.1 (hypothetical protein I3760_09G030700 [Carya illinoinensis])

HSP 1 Score: 61.6 bits (148), Expect = 4.0e-06
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 0

Query: 10 CRASCGCGLFLLILIEIITISSSFCYGHEDLER--RSL--GRRIVVDSMADSVSESG-RS 69
          C       LF L+LIEI+ + SS C  HE L R  RS+   R+++V + + S S++    
Sbjct: 4  CCRPLQAALFALLLIEIL-MCSSLCQCHESLPRSERSIQYSRKLLVSTASISTSQNKING 63

Query: 70 AIKEPKKAVEQSLRKAPPSGANPIQNK 92
          A+KEPKKAVE SLRKAPPS  NP QNK
Sbjct: 64 AMKEPKKAVEPSLRKAPPSVPNPTQNK 89

BLAST of Lcy09g004840 vs. NCBI nr
Match: KAF9664669.1 (hypothetical protein SADUNF_Sadunf16G0042300 [Salix dunnii])

HSP 1 Score: 60.8 bits (146), Expect = 6.8e-06
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 0

Query: 18  LFLLILIEIITISSSFCYGHED-----LERRSLGRRIVVDSMADS------VSESGRSAI 77
           L + IL+ I+T SSS C+ HE+      ERRS  R+++   M  +       ++ G   +
Sbjct: 59  LVVFILVHILT-SSSLCFCHEESILIPSERRSTSRKLLATPMKSAPASVAKENKLGGGKV 118

Query: 78  KEPKKAVEQSLRKAPPSGANPIQN 91
           KE KKAVEQSLRKAPPS +NPIQN
Sbjct: 119 KEAKKAVEQSLRKAPPSVSNPIQN 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
M5W7924.2e-0954.88Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G075600 PE=4 SV=1[more]
A0A6J5VFA84.2e-0954.88Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS44578 PE=4 S... [more]
U5FK756.7e-0747.44Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G047700 PE=4 ... [more]
W9RRP71.5e-0650.52Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018024 PE=4 SV=1[more]
A0A5N5FYA04.3e-0651.90Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
Match NameE-valueIdentityDescription
ONH95523.18.6e-0954.88hypothetical protein PRUPE_7G075600 [Prunus persica] >CAB4286843.1 unnamed prote... [more]
PNS97891.11.4e-0647.44hypothetical protein POPTR_016G047700 [Populus trichocarpa][more]
EXB93638.13.1e-0650.52hypothetical protein L484_018024 [Morus notabilis][more]
KAG2686953.14.0e-0649.43hypothetical protein I3760_09G030700 [Carya illinoinensis][more]
KAF9664669.16.8e-0646.43hypothetical protein SADUNF_Sadunf16G0042300 [Salix dunnii][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g004840.1Lcy09g004840.1mRNA