Lcy09g004220 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g004220
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	coiled-coil domain-containing glutamate-rich protein 1
Location	Chr09: 3770140 .. 3771392 (+)
RNA-Seq Expression	Lcy09g004220
Synteny	Lcy09g004220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCAACAAAGCTAAAAGTAACATTATAAAACACATCAATTAGGCATCCTAGAAAGACAAGGAATTAGCACGCCAAGGTCCCAACATGAACAGATCTACCACCACCCCTCGCAACTTCAATCCTCTTCCTAAGTTGGAGCAATCATAAACAAACCAAAAGCAAAGAAAAAGGCAGTGACAATGGCAGTGAAAGTTGCAGGCTTTAGCATCTCTGTCTTCTTGTCTTCCCCAGCAGCTGCACCATGTCCCTTCGATATCATTAAAGCCTGCTTCCATTGTTGGCCCACCCCCACAACCCAACAAATCAATCTCAATTCCTTTCCCACCATATAAACAGACCAGAATTTGGGACTTGACAGTTCAAACCCAGCTGAAATTTTTCAAATTTTTTCTCTGAGCAAAATCATCAAACATGTGGAGGGCAGAAGAAACTTACAGAGAAACCAAGCAAGGAGAGGTTGAAGATAAAGATTCTATAGGCACAGCTTTGTTATCAGCTGGAACAGCATTGTTAATGGCAGCTTGTTTGAAGAAAGCTGTGGTTCTGTTCTTGGTTGAGCAATGGCGGATCTGGGTCTTCCTTGTCTTGAATCTCATCCTTGTAGCAATTTTCTTCACGTCCAGTCCTTCAAGTTACAGTGAAAGCCAAACCCAAGAGCCAAGTGCTAAAACAAATCAGAAGAAGATTAGAAACAGAGAGTGCAAGGAGCCTGAAAAAGTAGAAAAAGTTGAAATCAAACAACAACAGATGGATAAAGCAGAGGAAACTGAAGAACAAGAAGTAATTGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAATTGGGTTGTCGAAAGAAGAGTTGAATGAGAGAGTGGAAGCTTTCATTGTGATGTTCAAGAAGCAATTGATTTCAGATGCGAGAAAAGTGGGAAACAGACGCACCCCATTGAGCTATAATACTCGATAGCCAAAGCCAAAGCCGAAGTGGAAGCCAAATTCTTGTGTGGTTAAAATGAACCACTTTGGCCCAAGATTTTGGGAATGAAGATGAGGATGTTCTTTTGTTTGTTTGGTGAGTTTCAAGAGGTGAAAAAAATGAGATCTTGAAGCATAATTTTGAAATATATAATCATTTTGTATAACTCAAGATTCTTATGGCTCTTTTTGGCAAAGAGATGGGCATGAATTCATGATCTAGACTAAAGTTATATACTTATATGTAAGGACGATTTGTGGTGATTCTTTTTCATCTCCAATTGAATGGA

mRNA sequence

TCCCAACAAAGCTAAAAGTAACATTATAAAACACATCAATTAGGCATCCTAGAAAGACAAGGAATTAGCACGCCAAGGTCCCAACATGAACAGATCTACCACCACCCCTCGCAACTTCAATCCTCTTCCTAAGTTGGAGCAATCATAAACAAACCAAAAGCAAAGAAAAAGGCAGTGACAATGGCAGTGAAAGTTGCAGGCTTTAGCATCTCTGTCTTCTTGTCTTCCCCAGCAGCTGCACCATGTCCCTTCGATATCATTAAAGCCTGCTTCCATTGTTGGCCCACCCCCACAACCCAACAAATCAATCTCAATTCCTTTCCCACCATATAAACAGACCAGAATTTGGGACTTGACAGTTCAAACCCAGCTGAAATTTTTCAAATTTTTTCTCTGAGCAAAATCATCAAACATGTGGAGGGCAGAAGAAACTTACAGAGAAACCAAGCAAGGAGAGGTTGAAGATAAAGATTCTATAGGCACAGCTTTGTTATCAGCTGGAACAGCATTGTTAATGGCAGCTTGTTTGAAGAAAGCTGTGGTTCTGTTCTTGGTTGAGCAATGGCGGATCTGGGTCTTCCTTGTCTTGAATCTCATCCTTGTAGCAATTTTCTTCACGTCCAGTCCTTCAAGTTACAGTGAAAGCCAAACCCAAGAGCCAAGTGCTAAAACAAATCAGAAGAAGATTAGAAACAGAGAGTGCAAGGAGCCTGAAAAAGTAGAAAAAGTTGAAATCAAACAACAACAGATGGATAAAGCAGAGGAAACTGAAGAACAAGAAGTAATTGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAATTGGGTTGTCGAAAGAAGAGTTGAATGAGAGAGTGGAAGCTTTCATTGTGATGTTCAAGAAGCAATTGATTTCAGATGCGAGAAAAGTGGGAAACAGACGCACCCCATTGAGCTATAATACTCGATAGCCAAAGCCAAAGCCGAAGTGGAAGCCAAATTCTTGTGTGGTTAAAATGAACCACTTTGGCCCAAGATTTTGGGAATGAAGATGAGGATGTTCTTTTGTTTGTTTGGTGAGTTTCAAGAGGTGAAAAAAATGAGATCTTGAAGCATAATTTTGAAATATATAATCATTTTGTATAACTCAAGATTCTTATGGCTCTTTTTGGCAAAGAGATGGGCATGAATTCATGATCTAGACTAAAGTTATATACTTATATGTAAGGACGATTTGTGGTGATTCTTTTTCATCTCCAATTGAATGGA

Coding sequence (CDS)

ATGTGGAGGGCAGAAGAAACTTACAGAGAAACCAAGCAAGGAGAGGTTGAAGATAAAGATTCTATAGGCACAGCTTTGTTATCAGCTGGAACAGCATTGTTAATGGCAGCTTGTTTGAAGAAAGCTGTGGTTCTGTTCTTGGTTGAGCAATGGCGGATCTGGGTCTTCCTTGTCTTGAATCTCATCCTTGTAGCAATTTTCTTCACGTCCAGTCCTTCAAGTTACAGTGAAAGCCAAACCCAAGAGCCAAGTGCTAAAACAAATCAGAAGAAGATTAGAAACAGAGAGTGCAAGGAGCCTGAAAAAGTAGAAAAAGTTGAAATCAAACAACAACAGATGGATAAAGCAGAGGAAACTGAAGAACAAGAAGTAATTGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAATTGGGTTGTCGAAAGAAGAGTTGAATGAGAGAGTGGAAGCTTTCATTGTGATGTTCAAGAAGCAATTGATTTCAGATGCGAGAAAAGTGGGAAACAGACGCACCCCATTGAGCTATAATACTCGATAG

Protein sequence

MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAEETEEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYNTR

Homology

[Close]

BLAST of Lcy09g004220 vs. ExPASy TrEMBL
Match: A0A6J1C149 (coiled-coil domain-containing glutamate-rich protein 1 OS=Momordica charantia OX=3673 GN=LOC111006473 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 4.3e-58
Identity = 143/181 (79.01%), Postives = 159/181 (87.85%), Query Frame = 0


Query: 1   MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLN 60
           MW+AEE YRETKQGEVEDKDS+GT LLSAGTALLMAACLK+AVVLFLVEQWR+WVFLVLN
Sbjct: 1   MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60

Query: 61  LILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECK-EPEKVEKVEIKQQQMDKAEET 120
           LI+VAIFFTSSPS+Y ES  Q+PS    QKKI++RECK   EKVEKVE K Q+MDK EE 
Sbjct: 61  LIVVAIFFTSSPSNYRES--QDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEI 120

Query: 121 EEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYNT 180
           EE+E IEEEEEEEEEE+ ++GLSKEELNERVEAFIVMFK+QLI DARK GN  TPLSYN+
Sbjct: 121 EEEE-IEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYNS 178

[Close]

BLAST of Lcy09g004220 vs. ExPASy TrEMBL
Match: A0A6J1H605 (uncharacterized protein LOC111460852 OS=Cucurbita moschata OX=3662 GN=LOC111460852 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.2e-52
Identity = 138/181 (76.24%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 1   MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVL-FLVEQWRIWVFLVL 60
           MWRAEE  RE+KQGEVEDKD     +LSAGTALLMAACLK+AVVL FLVEQWRIWVFL L
Sbjct: 1   MWRAEEGCRESKQGEVEDKDCTSRGVLSAGTALLMAACLKRAVVLFFLVEQWRIWVFLAL 60

Query: 61  NLILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAEET 120
           NLILV IFFTSSP+SYSESQTQEP   T +KKIR+    EPEKVE+VEIKQQ+MDK    
Sbjct: 61  NLILVTIFFTSSPASYSESQTQEP---TKKKKIRS---SEPEKVEEVEIKQQEMDK---- 120

Query: 121 EEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYNT 180
                  EEE EE+EEEE IGLSKEELNERVEAFIVMFKKQLISDARKVG+RRTPLSY T
Sbjct: 121 -------EEEIEEDEEEEVIGLSKEELNERVEAFIVMFKKQLISDARKVGSRRTPLSYKT 164

[Close]

BLAST of Lcy09g004220 vs. ExPASy TrEMBL
Match: A0A1S3C9Q4 (ABC transporter F family member 4 OS=Cucumis melo OX=3656 GN=LOC103498035 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.1e-45
Identity = 132/180 (73.33%), Postives = 144/180 (80.00%), Query Frame = 0


Query: 1   MWRAEETYRETKQ-GEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVL 60
           MWR EE  RE KQ GE EDKDSI  ALLSAGTALLMA CLKKAVV+FLVEQWRIWVFL L
Sbjct: 1   MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKAVVMFLVEQWRIWVFLAL 60

Query: 61  NLILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAEET 120
           NLILVAIFFTS+P++YSE+Q QE S KT QKK  N E KE +K E+ + KQ++ +  E  
Sbjct: 61  NLILVAIFFTSNPANYSETQKQETSGKTKQKKTENIELKEAKK-EEDKTKQKKTENREFK 120

Query: 121 E-EQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYN 179
           E  +E  E EEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARK GNR   LSYN
Sbjct: 121 EARKEEDEIEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKGGNR---LSYN 176

[Close]

BLAST of Lcy09g004220 vs. ExPASy TrEMBL
Match: A0A0A0KVE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633200 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.3e-41
Identity = 129/186 (69.35%), Postives = 146/186 (78.49%), Query Frame = 0


Query: 1   MWRAEETYRETKQ-GEVEDKDSIGTALLSAGTALLMAACLKK-AVVLFLVEQWRIWVFLV 60
           MWR EE  RE KQ GE EDKDSI  ALLSAGTALLMA CLKK AVV+FLVEQWRIWVFLV
Sbjct: 1   MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLV 60

Query: 61  LNLILVAIFFTS---SPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDK 120
           LNLILVAIFFTS   +P++YSE+Q QE S KT  KKI  RE +E +K E+ + KQ++++ 
Sbjct: 61  LNLILVAIFFTSNPANPANYSETQKQETSGKTKLKKIEKRELEEAKK-EEDKTKQKKIEN 120

Query: 121 AEETE---EQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRR 179
            E  E   E++ I+EE+E EEEEEEEI LSKEELNERVEAFIVMFKKQLISDARK GNR 
Sbjct: 121 REIKEAIKEEDEIKEEDEIEEEEEEEIELSKEELNERVEAFIVMFKKQLISDARKGGNR- 180

[Close]

BLAST of Lcy09g004220 vs. ExPASy TrEMBL
Match: A0A6J1JR04 (uncharacterized protein LOC111487056 OS=Cucurbita maxima OX=3661 GN=LOC111487056 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 7.4e-34
Identity = 108/146 (73.97%), Postives = 116/146 (79.45%), Query Frame = 0


Query: 35  MAACLKKAVVL-FLVEQWRIWVFLVLNLILVAIFFTSSPSSYSESQTQEPSAKTNQKKIR 94
           MAACLK+AVVL FLVEQWRIWVFLVLNLILV IFFTSSP+SYSE+Q QEP   T +KKIR
Sbjct: 1   MAACLKRAVVLFFLVEQWRIWVFLVLNLILVTIFFTSSPASYSENQIQEP---TKKKKIR 60

Query: 95  NRECKEPEKVEKVEIKQQQMDKAEETEEQEVIEEEEEEEEEEEEEIGLSKE------ELN 154
           N    EPEKVE+VEIKQQ++ K           EEE EE+EEEEEIGLSKE      ELN
Sbjct: 61  N---SEPEKVEEVEIKQQEIGK-----------EEEIEEDEEEEEIGLSKEELNERVELN 120

Query: 155 ERVEAFIVMFKKQLISDARKVGNRRT 174
           ERVEAFIVMFKKQLISDARKVGNRRT
Sbjct: 121 ERVEAFIVMFKKQLISDARKVGNRRT 129

[Close]

BLAST of Lcy09g004220 vs. NCBI nr
Match: KAG7016160.1 (hypothetical protein SDJN02_21264, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.8 bits (652), Expect = 2.9e-64
Identity = 155/181 (85.64%), Postives = 166/181 (91.71%), Query Frame = 0


Query: 1   MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLN 60
           MWRAEE+YRE+KQ EVEDKDSIGTALLSAGTALLMAACLK+AVVLFLVEQWRIWVFL+LN
Sbjct: 1   MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60

Query: 61  LILVAIFFT---SSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAE 120
           LILVAIFFT   SSPSSYSESQTQE +AK  QKKI NRECKE EKVEK+EIK Q+ +K E
Sbjct: 61  LILVAIFFTSSPSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKLEIKHQEREK-E 120

Query: 121 ETEEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSY 179
           E EE+E+ EEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDAR+ GNRRTPLSY
Sbjct: 121 EEEEEELPEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSY 180

[Close]

BLAST of Lcy09g004220 vs. NCBI nr
Match: KAG6578611.1 (hypothetical protein SDJN03_23059, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-62
Identity = 152/181 (83.98%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 1   MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLN 60
           MWRAEE+YRE+KQ EVEDKDSIGTALLSAGTALLMAACLK+AVVLFLVEQWRIWVFL+LN
Sbjct: 1   MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60

Query: 61  LILVAIFFT---SSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAE 120
           LILVAIFFT   SSPSSYSESQTQE +AK  QKKI NRECKE EKVEK+EIK Q+ +K E
Sbjct: 61  LILVAIFFTSSPSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKLEIKHQEREKEE 120

Query: 121 ETEEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSY 179
           E EE+     EEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDAR+ GNRRTPLSY
Sbjct: 121 EEEEE---LPEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSY 178

[Close]

BLAST of Lcy09g004220 vs. NCBI nr
Match: XP_022134128.1 (coiled-coil domain-containing glutamate-rich protein 1 [Momordica charantia])

HSP 1 Score: 234.2 bits (596), Expect = 8.9e-58
Identity = 143/181 (79.01%), Postives = 159/181 (87.85%), Query Frame = 0


Query: 1   MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLN 60
           MW+AEE YRETKQGEVEDKDS+GT LLSAGTALLMAACLK+AVVLFLVEQWR+WVFLVLN
Sbjct: 1   MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60

Query: 61  LILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECK-EPEKVEKVEIKQQQMDKAEET 120
           LI+VAIFFTSSPS+Y ES  Q+PS    QKKI++RECK   EKVEKVE K Q+MDK EE 
Sbjct: 61  LIVVAIFFTSSPSNYRES--QDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEI 120

Query: 121 EEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYNT 180
           EE+E IEEEEEEEEEE+ ++GLSKEELNERVEAFIVMFK+QLI DARK GN  TPLSYN+
Sbjct: 121 EEEE-IEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYNS 178

[Close]

BLAST of Lcy09g004220 vs. NCBI nr
Match: XP_038890929.1 (uncharacterized protein LOC120080357 [Benincasa hispida])

HSP 1 Score: 219.5 bits (558), Expect = 2.3e-53
Identity = 138/178 (77.53%), Postives = 146/178 (82.02%), Query Frame = 0


Query: 1   MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLN 60
           MWRAEE+YRE KQGEVEDKDSIG  LLSAGTALLMAACLKKAVV+FLVEQWRIWVFLVLN
Sbjct: 1   MWRAEESYRELKQGEVEDKDSIGNVLLSAGTALLMAACLKKAVVMFLVEQWRIWVFLVLN 60

Query: 61  LILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAEETE 120
           LILVAIFFTSSP+SYSE+Q +E      QKKI+NRE KE    EK EIK          E
Sbjct: 61  LILVAIFFTSSPASYSENQNEE----AKQKKIKNRELKE---AEKTEIK----------E 120

Query: 121 EQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYN 179
           E+E+ EEE EEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARK  NR TP SYN
Sbjct: 121 EEEIEEEEIEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKGRNRSTPFSYN 161

[Close]

BLAST of Lcy09g004220 vs. NCBI nr
Match: XP_022959957.1 (uncharacterized protein LOC111460852 [Cucurbita moschata] >KAG6602469.1 hypothetical protein SDJN03_07702, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033143.1 hypothetical protein SDJN02_07196, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.1 bits (549), Expect = 2.5e-52
Identity = 138/181 (76.24%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 1   MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVL-FLVEQWRIWVFLVL 60
           MWRAEE  RE+KQGEVEDKD     +LSAGTALLMAACLK+AVVL FLVEQWRIWVFL L
Sbjct: 1   MWRAEEGCRESKQGEVEDKDCTSRGVLSAGTALLMAACLKRAVVLFFLVEQWRIWVFLAL 60

Query: 61  NLILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAEET 120
           NLILV IFFTSSP+SYSESQTQEP   T +KKIR+    EPEKVE+VEIKQQ+MDK    
Sbjct: 61  NLILVTIFFTSSPASYSESQTQEP---TKKKKIRS---SEPEKVEEVEIKQQEMDK---- 120

Query: 121 EEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYNT 180
                  EEE EE+EEEE IGLSKEELNERVEAFIVMFKKQLISDARKVG+RRTPLSY T
Sbjct: 121 -------EEEIEEDEEEEVIGLSKEELNERVEAFIVMFKKQLISDARKVGSRRTPLSYKT 164

[Close]

BLAST of Lcy09g004220 vs. TAIR 10
Match: AT3G28420.1 (Putative membrane lipoprotein )

HSP 1 Score: 49.3 bits (116), Expect = 3.8e-06
Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 10  ETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFT 69
           E K+    +++++ T+LL+A   L MA     + V +L+EQWR  VFL+LN++L+A++FT
Sbjct: 2   EMKRDIRVEEENMCTSLLTAVVVLSMACLKHFSSVSYLIEQWRSLVFLILNVVLLAVYFT 61

Query: 70  SSPSSYSES------------QTQEPSAKTNQKKIR---NREC-------KEPEKVEK-- 129
           S+  +   S              +E   K  +KK R      C        EP++V K  
Sbjct: 62  STRPNLGRSHDFKTRRGGRLRMMREKKNKIKKKKTRVVVEPACFDQGFLLVEPKEVIKKC 121

Query: 130 --VEIKQQQMDKAEETEEQEVIEEEEEE---EEEEEEEIGLSKEELNERVEAFIVMFKKQ 174
             VE  ++   K EET +  +  ++E E   EE+E E   LS EELNERVEAFI  F++ 
Sbjct: 122 VLVEETKRVCPKFEETVKDCLFHKKEIEYNGEEDEFEPGRLSNEELNERVEAFITTFRQH 181

The following BLAST results are available for this feature:

BLAST of Lcy09g004220 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g004220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C149	4.3e-58	79.01	coiled-coil domain-containing glutamate-rich protein 1 OS=Momordica charantia OX...	[more]
A0A6J1H605	1.2e-52	76.24	uncharacterized protein LOC111460852 OS=Cucurbita moschata OX=3662 GN=LOC1114608...	[more]
A0A1S3C9Q4	1.1e-45	73.33	ABC transporter F family member 4 OS=Cucumis melo OX=3656 GN=LOC103498035 PE=4 S...	[more]
A0A0A0KVE3	1.3e-41	69.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633200 PE=4 SV=1	[more]
A0A6J1JR04	7.4e-34	73.97	uncharacterized protein LOC111487056 OS=Cucurbita maxima OX=3661 GN=LOC111487056...	[more]

BLAST of Lcy09g004220 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016160.1	2.9e-64	85.64	hypothetical protein SDJN02_21264, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6578611.1	3.5e-62	83.98	hypothetical protein SDJN03_23059, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022134128.1	8.9e-58	79.01	coiled-coil domain-containing glutamate-rich protein 1 [Momordica charantia]	[more]
XP_038890929.1	2.3e-53	77.53	uncharacterized protein LOC120080357 [Benincasa hispida]	[more]
XP_022959957.1	2.5e-52	76.24	uncharacterized protein LOC111460852 [Cucurbita moschata] >KAG6602469.1 hypothet...	[more]

BLAST of Lcy09g004220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28420.1	3.8e-06	35.23	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 108..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..87
None	No IPR available	PANTHER	PTHR35997:SF5	PROTEIN, PUTATIVE-RELATED	coord: 6..173
None	No IPR available	PANTHER	PTHR35997	COTTON FIBER PROTEIN-RELATED	coord: 6..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g004220.1	Lcy09g004220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane