Lcy09g004010 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g004010
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein kinase domain-containing protein
Location	Chr09: 3555514 .. 3555855 (+)
RNA-Seq Expression	Lcy09g004010
Synteny	Lcy09g004010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAATCTTCAAATCCATGTTGTTTATGGTGTTTTCTTTGTGGGCATTCTTCATTTGTCTGTTTGGTTCCAATTGTGTGAGGGTTGTTGCTTCAACATTATTGTCTCCACTTGAACTGGAAGCTGCTGCTATTCTGAACAGTGGATGGTGGCTCGATCAAAATGTCTCAGATCGGTGCAACTGGGAGGGCATATCTTGTGAAGCATCATCCAACTTGAGGTATTCTGGTCAGTGCCAAAAGAATCTACTCTACAAAATTTCAATTTTTCATTTTTACCCAATCTCAACTCTTTTCGTGTCTACAATGCTAGTTTACAAGGAAGAATCCCTCCTGAAATAG

mRNA sequence

ATGCCAATCTTCAAATCCATGTTGTTTATGGTGTTTTCTTTGTGGGCATTCTTCATTTGTCTGTTTGGTTCCAATTGTGTGAGGGTTGTTGCTTCAACATTATTGTCTCCACTTGAACTGGAAGCTGCTGCTATTCTGAACAGTGGATGGTGGCTCGATCAAAATGTCTCAGATCGGTGCAACTGGGAGGGCATATCTTGTGAAGCATCATCCAACTTGAGGTATTCTGGTCAGTGCCAAAAGAATCTACTCTACAAAATTTCAATTTTTCATTTTTACCCAATCTCAACTCTTTTCGTGTCTACAATGCTAGTTTACAAGGAAGAATCCCTCCTGAAATAG

Coding sequence (CDS)

ATGCCAATCTTCAAATCCATGTTGTTTATGGTGTTTTCTTTGTGGGCATTCTTCATTTGTCTGTTTGGTTCCAATTGTGTGAGGGTTGTTGCTTCAACATTATTGTCTCCACTTGAACTGGAAGCTGCTGCTATTCTGAACAGTGGATGGTGGCTCGATCAAAATGTCTCAGATCGGTGCAACTGGGAGGGCATATCTTGTGAAGCATCATCCAACTTGAGGTATTCTGGTCAGTGCCAAAAGAATCTACTCTACAAAATTTCAATTTTTCATTTTTACCCAATCTCAACTCTTTTCGTGTCTACAATGCTAGTTTACAAGGAAGAATCCCTCCTGAAATAG

Protein sequence

MPIFKSMLFMVFSLWAFFICLFGSNCVRVVASTLLSPLELEAAAILNSGWWLDQNVSDRCNWEGISCEASSNLRYSGQCQKNLLYKISIFHFYPISTLFVSTMLVYKEESLLK

Homology

[Close]

BLAST of Lcy09g004010 vs. ExPASy TrEMBL
Match: A0A6J1ELN7 (MDIS1-interacting receptor like kinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435549 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-04
Identity = 30/73 (41.10%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 1  MPIFKSMLFMVFSLWAFFICLFGSNCVRVVASTLLSPLELEAAAILNSGWWLDQNVSDRC 60
          M  F S+ F++   + F   LF S      ASTL  PL+ E  A++ +GWW++QN+S RC
Sbjct: 1  MSNFTSLWFLLVFSYFFSNFLFDSIFTYSNASTLF-PLQQEGDALIQAGWWVNQNISLRC 60

Query: 61 NWEGISCEASSNL 74
           W+GI+C+AS ++
Sbjct: 61 KWKGITCDASGSI 72

[Close]

BLAST of Lcy09g004010 vs. ExPASy TrEMBL
Match: A0A6J1EL38 (MDIS1-interacting receptor like kinase 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435548 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.2e-04
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 1  MPIFKSMLFMVFSLWAFFICLFGSNCVRVVASTLLSPLELEAAAILNSGWWLDQNVSDRC 60
          MP F S+ F++FS + F   LF S      ASTL S  + EA A+L +GWW++ N+S RC
Sbjct: 1  MPSFTSLWFLLFSSYLFSNFLFHSIFTYSNASTLFSH-QQEADALLQTGWWVNHNISLRC 60

Query: 61 NWEGISCEASSNL 74
           W  I C+ S ++
Sbjct: 61 EWNDIICDDSGSI 72

[Close]

BLAST of Lcy09g004010 vs. ExPASy TrEMBL
Match: A0A6J1EKQ8 (MDIS1-interacting receptor like kinase 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435548 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.2e-04
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 1  MPIFKSMLFMVFSLWAFFICLFGSNCVRVVASTLLSPLELEAAAILNSGWWLDQNVSDRC 60
          MP F S+ F++FS + F   LF S      ASTL S  + EA A+L +GWW++ N+S RC
Sbjct: 1  MPSFTSLWFLLFSSYLFSNFLFHSIFTYSNASTLFSH-QQEADALLQTGWWVNHNISLRC 60

Query: 61 NWEGISCEASSNL 74
           W  I C+ S ++
Sbjct: 61 EWNDIICDDSGSI 72

[Close]

BLAST of Lcy09g004010 vs. ExPASy TrEMBL
Match: A0A2Z6M1H9 (Protein kinase domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_166640 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.9e-04
Identity = 27/61 (44.26%), Postives = 36/61 (59.02%), Query Frame = 0


Query: 17 FFICLFGSNCVRVVASTLLSPLELEAAAILNSGWWLDQ----NVSDRCNWEGISCEASSN 74
          FF+ +         ++TL S LELEA AILNSGWW       N+S+RCNW  ISC  + +
Sbjct: 4  FFVLIIWGLIAGTQSATLTSQLELEANAILNSGWWNTSDAYYNISNRCNWSQISCNKAGS 63

[Close]

BLAST of Lcy09g004010 vs. ExPASy TrEMBL
Match: A0A2Z6MQS2 (Protein kinase domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_166570 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.8e-04
Identity = 27/64 (42.19%), Postives = 37/64 (57.81%), Query Frame = 0


Query: 14 LWAFFICLFGSNCVRVVASTLLSPLELEAAAILNSGWWLDQ----NVSDRCNWEGISCEA 73
          +W  F+ +     V   +STL S LE+EA AILNSGWW       ++S RCNW  ISC  
Sbjct: 1  MWMVFVLIIWGLMVGTESSTLTSQLEMEANAILNSGWWNTSLAYYDISYRCNWRQISCNN 60

[Close]

BLAST of Lcy09g004010 vs. NCBI nr
Match: XP_023543558.1 (probable leucine-rich repeat receptor-like protein kinase At1g35710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 65.1 bits (157), Expect = 4.5e-07
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 1  MPIFKSMLFMVFSLWAFFICLFGSNCVRVVASTLLSPLELEAAAILNSGWWLDQNVSDRC 60
          MP F S+ F++FS + F   LF S      ASTL  PL+ E  A+  +GWW++QN+S RC
Sbjct: 1  MPNFTSLWFLLFSSYLFSNFLFDSTFTYSNASTLF-PLQQEGDALFQAGWWVNQNISLRC 60

Query: 61 NWEGISCEASSNL 74
           W+GI+C+AS ++
Sbjct: 61 KWKGITCDASGSI 72

[Close]

BLAST of Lcy09g004010 vs. NCBI nr
Match: KAG7033575.1 (MDIS1-interacting receptor like kinase 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-04
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 1   MPIFKSMLFMVFSLWAFFICLFGSNCVRVVASTLLSPLELEAAAILNSGWWLDQNVSDRC 60
           MP F S+ F++FS + F   LF S  V   ASTL   L+ EA A+L +GWW++ N+S RC
Sbjct: 87  MPSFTSLWFLLFSSYLFSNFLFDSILVYSNASTLFL-LQQEADALLQTGWWVNHNISLRC 146

Query: 61  NWEGISCEASSNL 74
            W  I C+ S ++
Sbjct: 147 EWNDIICDDSGSI 158

[Close]

BLAST of Lcy09g004010 vs. NCBI nr
Match: XP_022928724.1 (MDIS1-interacting receptor like kinase 2-like [Cucurbita moschata])

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-04
Identity = 30/73 (41.10%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 1  MPIFKSMLFMVFSLWAFFICLFGSNCVRVVASTLLSPLELEAAAILNSGWWLDQNVSDRC 60
          M  F S+ F++   + F   LF S      ASTL  PL+ E  A++ +GWW++QN+S RC
Sbjct: 1  MSNFTSLWFLLVFSYFFSNFLFDSIFTYSNASTLF-PLQQEGDALIQAGWWVNQNISLRC 60

Query: 61 NWEGISCEASSNL 74
           W+GI+C+AS ++
Sbjct: 61 KWKGITCDASGSI 72

[Close]

BLAST of Lcy09g004010 vs. NCBI nr
Match: XP_022928722.1 (MDIS1-interacting receptor like kinase 2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 55.1 bits (131), Expect = 4.6e-04
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 1  MPIFKSMLFMVFSLWAFFICLFGSNCVRVVASTLLSPLELEAAAILNSGWWLDQNVSDRC 60
          MP F S+ F++FS + F   LF S      ASTL S  + EA A+L +GWW++ N+S RC
Sbjct: 1  MPSFTSLWFLLFSSYLFSNFLFHSIFTYSNASTLFSH-QQEADALLQTGWWVNHNISLRC 60

Query: 61 NWEGISCEASSNL 74
           W  I C+ S ++
Sbjct: 61 EWNDIICDDSGSI 72

[Close]

BLAST of Lcy09g004010 vs. NCBI nr
Match: XP_022928721.1 (MDIS1-interacting receptor like kinase 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 55.1 bits (131), Expect = 4.6e-04
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 1  MPIFKSMLFMVFSLWAFFICLFGSNCVRVVASTLLSPLELEAAAILNSGWWLDQNVSDRC 60
          MP F S+ F++FS + F   LF S      ASTL S  + EA A+L +GWW++ N+S RC
Sbjct: 1  MPSFTSLWFLLFSSYLFSNFLFHSIFTYSNASTLFSH-QQEADALLQTGWWVNHNISLRC 60

Query: 61 NWEGISCEASSNL 74
           W  I C+ S ++
Sbjct: 61 EWNDIICDDSGSI 72

The following BLAST results are available for this feature:

BLAST of Lcy09g004010 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g004010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ELN7	1.0e-04	41.10	MDIS1-interacting receptor like kinase 2-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1EL38	2.2e-04	42.47	MDIS1-interacting receptor like kinase 2-like isoform X1 OS=Cucurbita moschata O...	[more]
A0A6J1EKQ8	2.2e-04	42.47	MDIS1-interacting receptor like kinase 2-like isoform X2 OS=Cucurbita moschata O...	[more]
A0A2Z6M1H9	2.9e-04	44.26	Protein kinase domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TS...	[more]
A0A2Z6MQS2	3.8e-04	42.19	Protein kinase domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TS...	[more]

BLAST of Lcy09g004010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543558.1	4.5e-07	45.21	probable leucine-rich repeat receptor-like protein kinase At1g35710 [Cucurbita p...	[more]
KAG7033575.1	1.2e-04	43.84	MDIS1-interacting receptor like kinase 2, partial [Cucurbita argyrosperma subsp....	[more]
XP_022928724.1	2.1e-04	41.10	MDIS1-interacting receptor like kinase 2-like [Cucurbita moschata]	[more]
XP_022928722.1	4.6e-04	42.47	MDIS1-interacting receptor like kinase 2-like isoform X2 [Cucurbita moschata]	[more]
XP_022928721.1	4.6e-04	42.47	MDIS1-interacting receptor like kinase 2-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Lcy09g004010 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g004010.1	Lcy09g004010.1	mRNA