Lcy09g003690 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g003690
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Casparian strip membrane protein 3
Location	Chr09: 3246232 .. 3247433 (-)
RNA-Seq Expression	Lcy09g003690
Synteny	Lcy09g003690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACTGCTCAGCCATGCACATTGAACGTCCTAAAGAAAAACCACTTCTGAAAGCTTCATAGCCCAAACATAAACCTTCAAAGAAAGATGAAGGCAGCCACGGGAGAGTCGAGTGAGCTAAAGAGTTCCAAAATCAAACCAGGGGTGAACCGAGGTTTGTCGATACTCGACTTCATCCTCAGGTTGGCTGCCATCGTTGGAACACTAGGAAGTGCCATAGTAATGGGAACCACCAACCAGACTCTTCCATTTTTCACTCAGTTCATTCAGTTCAGAGCTGAGTATAATGATCTCCCTATGTTTACGTATGTCATAACATAACAAAACGTTTGATTTATATTTCAAAAACTAACCCGTCATGAATTTACTAACCTCTTTTGGGTGTTTGAGCAGCTTCTTTGTTGTAGCCAACGCCATTGTAAGTGGCTACTTGGCTCTTTCTCTGCCTGTTTCTATATTTCACATCCTGAGGAGCAGAGCGCATGGCACAAGAGTTCTGCTGCTCTTCTTAGACGCGGTACTTCCTTTATCTCCATGAAGATCAATCATTTTCCTTTCCATCATGTTAGCATCTTAAGAAAACCACCTATCCAGTATAAAACATACAAGTAATCTTCGGCAGTGATTAAAACAAAGGAAGAAAAAAAAAAAAAGTAGACCAAGTTCGCTTACTCGTGTGTTTTATACAATTGTGAACAGGGAATGATGGCTCTTTTGACAGCTGGGGCTTCTGCAGCAGCAGCCATTGTGTACTTAGCACACAACGGAAATGCCAAGACAAATTGGTTATCCATCTGCCAACAATTCAACTCCTTCTGCGAGCGAATCTCGGGCTCTTTGATCGGATCTTTTGCAGCAATTGTTCTGTTTATGGTTATGATCTTCCTGTTAGGTGCAGCACTGTCTCGTCGTCGCTGAAAGTAGTTTATCATGATCACACCCTTGCAAGTTTATGAAAACTACATCTGGGTCTTTTTATCTGCAAATGATTATGCATATATGAATCTGAGTGTGTTAAAAAATGACTGAGGTCCAATTTGTCCGTGTGTGTGTGACTGTGATGTATTGTAAGTCGATGTAAGCATTAAACTTCAGTTTGTAACGAAAACCGTATGAATACTATTATATCTCTGAGCTAGCCCAACAATGCAGATAGACTTCAACATAAAAACATGGTAAACACACTCATATTTATGCATAAA

mRNA sequence

CACACTGCTCAGCCATGCACATTGAACGTCCTAAAGAAAAACCACTTCTGAAAGCTTCATAGCCCAAACATAAACCTTCAAAGAAAGATGAAGGCAGCCACGGGAGAGTCGAGTGAGCTAAAGAGTTCCAAAATCAAACCAGGGGTGAACCGAGGTTTGTCGATACTCGACTTCATCCTCAGGTTGGCTGCCATCGTTGGAACACTAGGAAGTGCCATAGTAATGGGAACCACCAACCAGACTCTTCCATTTTTCACTCAGTTCATTCAGTTCAGAGCTGAGTATAATGATCTCCCTATGTTTACCTTCTTTGTTGTAGCCAACGCCATTGTAAGTGGCTACTTGGCTCTTTCTCTGCCTGTTTCTATATTTCACATCCTGAGGAGCAGAGCGCATGGCACAAGAGTTCTGCTGCTCTTCTTAGACGCGGGAATGATGGCTCTTTTGACAGCTGGGGCTTCTGCAGCAGCAGCCATTGTGTACTTAGCACACAACGGAAATGCCAAGACAAATTGGTTATCCATCTGCCAACAATTCAACTCCTTCTGCGAGCGAATCTCGGGCTCTTTGATCGGATCTTTTGCAGCAATTGTTCTGTTTATGGTTATGATCTTCCTGTTAGGTGCAGCACTGTCTCGTCGTCGCTGAAAGTAGTTTATCATGATCACACCCTTGCAAGTTTATGAAAACTACATCTGGGTCTTTTTATCTGCAAATGATTATGCATATATGAATCTGAGTGTGTTAAAAAATGACTGAGGTCCAATTTGTCCGTGTGTGTGTGACTGTGATGTATTGTAAGTCGATGTAAGCATTAAACTTCAGTTTGTAACGAAAACCGTATGAATACTATTATATCTCTGAGCTAGCCCAACAATGCAGATAGACTTCAACATAAAAACATGGTAAACACACTCATATTTATGCATAAA

Coding sequence (CDS)

ATGAAGGCAGCCACGGGAGAGTCGAGTGAGCTAAAGAGTTCCAAAATCAAACCAGGGGTGAACCGAGGTTTGTCGATACTCGACTTCATCCTCAGGTTGGCTGCCATCGTTGGAACACTAGGAAGTGCCATAGTAATGGGAACCACCAACCAGACTCTTCCATTTTTCACTCAGTTCATTCAGTTCAGAGCTGAGTATAATGATCTCCCTATGTTTACCTTCTTTGTTGTAGCCAACGCCATTGTAAGTGGCTACTTGGCTCTTTCTCTGCCTGTTTCTATATTTCACATCCTGAGGAGCAGAGCGCATGGCACAAGAGTTCTGCTGCTCTTCTTAGACGCGGGAATGATGGCTCTTTTGACAGCTGGGGCTTCTGCAGCAGCAGCCATTGTGTACTTAGCACACAACGGAAATGCCAAGACAAATTGGTTATCCATCTGCCAACAATTCAACTCCTTCTGCGAGCGAATCTCGGGCTCTTTGATCGGATCTTTTGCAGCAATTGTTCTGTTTATGGTTATGATCTTCCTGTTAGGTGCAGCACTGTCTCGTCGTCGCTGA

Protein sequence

MKAATGESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFIQFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALLTAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGAALSRRR

Homology

[Close]

BLAST of Lcy09g003690 vs. ExPASy Swiss-Prot
Match: A7PMY7 (Casparian strip membrane protein 3 OS=Vitis vinifera OX=29760 GN=VIT_14s0108g01050 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 9.9e-63
Identity = 128/185 (69.19%), Postives = 151/185 (81.62%), Query Frame = 0


Query: 1   MKAATGESSE-LKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQF 60
           MKA   E  E  K+S  + GVNRG+SILDFILRL  I+GTLGSAI MGTTN+TLPFFTQF
Sbjct: 1   MKAGALELGEGSKTSIPRGGVNRGISILDFILRLITIIGTLGSAIAMGTTNETLPFFTQF 60

Query: 61  IQFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMAL 120
            QFRAEY+DLP FTFFV+AN+IVSGYL LSLP+SI HI+RS A  +R++L+F D  M+AL
Sbjct: 61  TQFRAEYDDLPTFTFFVIANSIVSGYLVLSLPMSILHIVRSGARASRIVLIFFDTAMLAL 120

Query: 121 LTAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLG 180
           LTA ASAA+AIVYLAH GNA+ NW +ICQQF SFCERISGSLIGSF  I+LF++++ L  
Sbjct: 121 LTAAASAASAIVYLAHKGNAQANWFAICQQFKSFCERISGSLIGSFGGIILFILLVLLSA 180

Query: 181 AALSR 185
            ALSR
Sbjct: 181 VALSR 185

[Close]

BLAST of Lcy09g003690 vs. ExPASy Swiss-Prot
Match: B9I534 (Casparian strip membrane protein 6 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_569472 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 4.9e-62
Identity = 126/186 (67.74%), Postives = 150/186 (80.65%), Query Frame = 0


Query: 1   MKAATGESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFI 60
           MKA   E  E KSS  K  VNRG++ILDFILR+ A +GTLGSAI M TTN+TLPFFTQFI
Sbjct: 1   MKAGPIELGEGKSSAPKAAVNRGVAILDFILRILAFIGTLGSAISMATTNETLPFFTQFI 60

Query: 61  QFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALL 120
           +FRAEY+DLP FTFFVVAN +VS YL  SLP SIF+I+RS+A  +R+LL+ LD  M+ LL
Sbjct: 61  RFRAEYDDLPTFTFFVVANGVVSAYLLFSLPFSIFNIVRSKAQNSRILLIILDTAMLGLL 120

Query: 121 TAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGA 180
           +AGASAAAAIVYLAH GN +TNW +ICQQFNSFCERISGSLIGSF  +V+F+++I L   
Sbjct: 121 SAGASAAAAIVYLAHQGNVRTNWSAICQQFNSFCERISGSLIGSFIGVVVFILLISLSAV 180

Query: 181 ALSRRR 187
           ALSR +
Sbjct: 181 ALSRHK 186

[Close]

BLAST of Lcy09g003690 vs. ExPASy Swiss-Prot
Match: A2YAZ1 (Casparian strip membrane protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_22263 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.9e-61
Identity = 122/179 (68.16%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 7   ESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFIQFRAEY 66
           E  E   + +  GV++G+SILD ILR  AI+GTL SAI MGTTNQTLPFFTQFI+F+A+Y
Sbjct: 6   EHGETSKAPLSRGVSKGVSILDVILRFVAIIGTLASAIAMGTTNQTLPFFTQFIRFKAQY 65

Query: 67  NDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALLTAGASA 126
           +DLP  TFFVVAN+IVS YL LSLP+SI H++RSRA  +R++L+F DA M+AL+TAGASA
Sbjct: 66  SDLPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIFFDAAMLALVTAGASA 125

Query: 127 AAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGAALSRR 186
           AAAIVYLAH GNA+ NWL+ICQQF+SFCERISGSLIGSFAA+V+ +++IFL   AL+RR
Sbjct: 126 AAAIVYLAHKGNARANWLAICQQFDSFCERISGSLIGSFAAMVVLVLLIFLSAIALARR 184

[Close]

BLAST of Lcy09g003690 vs. ExPASy Swiss-Prot
Match: Q67X40 (Casparian strip membrane protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0231050 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.9e-61
Identity = 122/179 (68.16%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 7   ESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFIQFRAEY 66
           E  E   + +  GV++G+SILD ILR  AI+GTL SAI MGTTNQTLPFFTQFI+F+A+Y
Sbjct: 6   EHGETSKAPLSRGVSKGVSILDVILRFVAIIGTLASAIAMGTTNQTLPFFTQFIRFKAQY 65

Query: 67  NDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALLTAGASA 126
           +DLP  TFFVVAN+IVS YL LSLP+SI H++RSRA  +R++L+F DA M+AL+TAGASA
Sbjct: 66  SDLPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIFFDAAMLALVTAGASA 125

Query: 127 AAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGAALSRR 186
           AAAIVYLAH GNA+ NWL+ICQQF+SFCERISGSLIGSFAA+V+ +++IFL   AL+RR
Sbjct: 126 AAAIVYLAHKGNARANWLAICQQFDSFCERISGSLIGSFAAMVVLVLLIFLSAIALARR 184

[Close]

BLAST of Lcy09g003690 vs. ExPASy Swiss-Prot
Match: P0DI54 (Casparian strip membrane protein 1 OS=Malus domestica OX=3750 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-60
Identity = 119/175 (68.00%), Postives = 144/175 (82.29%), Query Frame = 0


Query: 11  LKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFIQFRAEYNDLP 70
           + S+  + GVNRG SILDFILR+ A +GTL SA+ MGTT + LPFFTQF+QFRAEY+DLP
Sbjct: 1   MTSTAARAGVNRGASILDFILRIVAFLGTLVSAVTMGTTRERLPFFTQFLQFRAEYDDLP 60

Query: 71  MFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALLTAGASAAAAI 130
            FTFFVVAN+IV  YL  SL +S+FHI+RS A  +R++L+F D  M+ALLTAGASAAAAI
Sbjct: 61  TFTFFVVANSIVCAYLVFSLALSVFHIIRSNAKKSRIILIFFDTAMLALLTAGASAAAAI 120

Query: 131 VYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGAALSRR 186
           VYL+H GNAK NW +ICQQFNSFCERISGSLIGSF  +V+F+++I L  AALSRR
Sbjct: 121 VYLSHKGNAKANWFAICQQFNSFCERISGSLIGSFVGVVVFILLILLSAAALSRR 175

[Close]

BLAST of Lcy09g003690 vs. ExPASy TrEMBL
Match: A0A6J1GRF2 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456446 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.4e-82
Identity = 166/186 (89.25%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   MKAATGESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFI 60
           MKA   ESSELKSSK KPGVNRGLSILDFILRLAAIVGTLGSAI MGTTNQTLPF TQFI
Sbjct: 18  MKATMSESSELKSSKTKPGVNRGLSILDFILRLAAIVGTLGSAIAMGTTNQTLPFVTQFI 77

Query: 61  QFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALL 120
           QFRAEYND+PMFTFFVVANAIVSGYL LSLP SIFHILR+RAHGTRVLL+FLD GMMALL
Sbjct: 78  QFRAEYNDIPMFTFFVVANAIVSGYLVLSLPFSIFHILRNRAHGTRVLLVFLDGGMMALL 137

Query: 121 TAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGA 180
           T+GASAAAAIVYLAH GNAKTNWL++CQQFNSFCERISGSLIGSFAAI+LF+VMIFL G 
Sbjct: 138 TSGASAAAAIVYLAHKGNAKTNWLAVCQQFNSFCERISGSLIGSFAAIILFLVMIFLSGV 197

Query: 181 ALSRRR 187
           ALSRRR
Sbjct: 198 ALSRRR 203

[Close]

BLAST of Lcy09g003690 vs. ExPASy TrEMBL
Match: A0A6J1BYA1 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006680 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.4e-82
Identity = 167/185 (90.27%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MKAATGESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFI 60
           MKAA GES ELKSSK KPG+NRGLSILDFILRLAAIVGTLG+AI MGTTNQTLPF TQFI
Sbjct: 1   MKAAVGESGELKSSKSKPGMNRGLSILDFILRLAAIVGTLGNAIAMGTTNQTLPFSTQFI 60

Query: 61  QFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALL 120
           +FRAEYNDLPMFTFFVVANAIV+GYL LSLP+SIFHI+RSRAHGTRVLL+FL AGMMALL
Sbjct: 61  RFRAEYNDLPMFTFFVVANAIVTGYLVLSLPLSIFHIVRSRAHGTRVLLVFLGAGMMALL 120

Query: 121 TAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGA 180
           TAGASAAAAIVYLAH GN++TNWLSICQQFNSFCERISGSLIGSFA IVLFMVMIFLLGA
Sbjct: 121 TAGASAAAAIVYLAHKGNSRTNWLSICQQFNSFCERISGSLIGSFAGIVLFMVMIFLLGA 180

Query: 181 ALSRR 186
           ALSRR
Sbjct: 181 ALSRR 185

[Close]

BLAST of Lcy09g003690 vs. ExPASy TrEMBL
Match: A0A6J1JTR2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487433 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81
Identity = 165/186 (88.71%), Postives = 173/186 (93.01%), Query Frame = 0


Query: 1   MKAATGESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFI 60
           MKA   ESSELKSSK KPGVNRGLSILDFILRLAAIVGTLGSAI MGTTNQTLPF TQFI
Sbjct: 18  MKATMSESSELKSSKTKPGVNRGLSILDFILRLAAIVGTLGSAIAMGTTNQTLPFVTQFI 77

Query: 61  QFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALL 120
           QFRAEYND+PMFTFFVVANAIVSGYL LSLP SIFHILR+RAHGTRVLL+FLD GMMALL
Sbjct: 78  QFRAEYNDIPMFTFFVVANAIVSGYLVLSLPFSIFHILRNRAHGTRVLLVFLDGGMMALL 137

Query: 121 TAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGA 180
           T+GASAAAAIVYLAH GNAKTNWL++CQQFNSFCERISGSLIGSFAAI+LF+VMIFL G 
Sbjct: 138 TSGASAAAAIVYLAHKGNAKTNWLAVCQQFNSFCERISGSLIGSFAAIILFLVMIFLSGV 197

Query: 181 ALSRRR 187
           ALS RR
Sbjct: 198 ALSHRR 203

[Close]

BLAST of Lcy09g003690 vs. ExPASy TrEMBL
Match: A0A1S3C9W9 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498495 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.6e-79
Identity = 163/186 (87.63%), Postives = 170/186 (91.40%), Query Frame = 0


Query: 1   MKAATGESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFI 60
           MKA TGESSELKSSK+KPGVNRGLSI DFILRLAAIVG LGSAI MGTT QTLPF TQFI
Sbjct: 28  MKAVTGESSELKSSKLKPGVNRGLSIFDFILRLAAIVGALGSAIAMGTTTQTLPFATQFI 87

Query: 61  QFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALL 120
           QFRAEYNDLPMFTFFVVA AIVSGYL LSLP+SIFHILRSRA  TRV+L+FLDAGMMALL
Sbjct: 88  QFRAEYNDLPMFTFFVVACAIVSGYLVLSLPLSIFHILRSRARATRVVLVFLDAGMMALL 147

Query: 121 TAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGA 180
           T+GASAAAAIVYLAH GN KTNWL+ICQQFNSFCER SGSLIGSF AIVL M+MIFL GA
Sbjct: 148 TSGASAAAAIVYLAHKGNGKTNWLAICQQFNSFCERTSGSLIGSFVAIVLLMIMIFLSGA 207

Query: 181 ALSRRR 187
           ALSRRR
Sbjct: 208 ALSRRR 213

[Close]

BLAST of Lcy09g003690 vs. ExPASy TrEMBL
Match: A0A5D3BNI0 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002770 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.9e-78
Identity = 162/186 (87.10%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 1   MKAATGESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFI 60
           MKA TGESSELKSSK+KP VNRGLSI DFILRLAAIVG LGSAI MGTT QTLPF TQFI
Sbjct: 1   MKAVTGESSELKSSKLKPWVNRGLSIFDFILRLAAIVGALGSAIAMGTTTQTLPFATQFI 60

Query: 61  QFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALL 120
           QFRAEYNDLPMFTFFVVA AIVSGYL LSLP+SIFHILRSRA  TRV+L+FLDAGMMALL
Sbjct: 61  QFRAEYNDLPMFTFFVVACAIVSGYLVLSLPLSIFHILRSRARATRVVLVFLDAGMMALL 120

Query: 121 TAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGA 180
           T+GASAAAAIVYLAH GN KTNWL+ICQQFNSFCER SGSLIGSF AIVL M+MIFL GA
Sbjct: 121 TSGASAAAAIVYLAHKGNGKTNWLAICQQFNSFCERTSGSLIGSFVAIVLLMIMIFLSGA 180

Query: 181 ALSRRR 187
           ALSRRR
Sbjct: 181 ALSRRR 186

[Close]

BLAST of Lcy09g003690 vs. NCBI nr
Match: KAG6602505.1 (hypothetical protein SDJN03_07738, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 314.3 bits (804), Expect = 7.0e-82
Identity = 166/186 (89.25%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   MKAATGESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFI 60
           MKA   ESSELKSSK KPGVNRGLSILDFILRLAAIVGTLGSAI MGTTNQTLPF TQFI
Sbjct: 1   MKATMSESSELKSSKTKPGVNRGLSILDFILRLAAIVGTLGSAIAMGTTNQTLPFVTQFI 60

Query: 61  QFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALL 120
           QFRAEYND+PMFTFFVVANAIVSGYL LSLP SIFHILR+RAHGTRVLL+FLD GMMALL
Sbjct: 61  QFRAEYNDIPMFTFFVVANAIVSGYLVLSLPFSIFHILRNRAHGTRVLLVFLDGGMMALL 120

Query: 121 TAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGA 180
           T+GASAAAAIVYLAH GNAKTNWL++CQQFNSFCERISGSLIGSFAAI+LF+VMIFL G 
Sbjct: 121 TSGASAAAAIVYLAHKGNAKTNWLAVCQQFNSFCERISGSLIGSFAAIILFLVMIFLSGV 180

Query: 181 ALSRRR 187
           ALSRRR
Sbjct: 181 ALSRRR 186

[Close]

BLAST of Lcy09g003690 vs. NCBI nr
Match: XP_022954075.1 (casparian strip membrane protein 1 [Cucurbita moschata])

HSP 1 Score: 314.3 bits (804), Expect = 7.0e-82
Identity = 166/186 (89.25%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   MKAATGESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFI 60
           MKA   ESSELKSSK KPGVNRGLSILDFILRLAAIVGTLGSAI MGTTNQTLPF TQFI
Sbjct: 18  MKATMSESSELKSSKTKPGVNRGLSILDFILRLAAIVGTLGSAIAMGTTNQTLPFVTQFI 77

Query: 61  QFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALL 120
           QFRAEYND+PMFTFFVVANAIVSGYL LSLP SIFHILR+RAHGTRVLL+FLD GMMALL
Sbjct: 78  QFRAEYNDIPMFTFFVVANAIVSGYLVLSLPFSIFHILRNRAHGTRVLLVFLDGGMMALL 137

Query: 121 TAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGA 180
           T+GASAAAAIVYLAH GNAKTNWL++CQQFNSFCERISGSLIGSFAAI+LF+VMIFL G 
Sbjct: 138 TSGASAAAAIVYLAHKGNAKTNWLAVCQQFNSFCERISGSLIGSFAAIILFLVMIFLSGV 197

Query: 181 ALSRRR 187
           ALSRRR
Sbjct: 198 ALSRRR 203

[Close]

BLAST of Lcy09g003690 vs. NCBI nr
Match: XP_022134430.1 (casparian strip membrane protein 1 [Momordica charantia])

HSP 1 Score: 313.9 bits (803), Expect = 9.1e-82
Identity = 167/185 (90.27%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MKAATGESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFI 60
           MKAA GES ELKSSK KPG+NRGLSILDFILRLAAIVGTLG+AI MGTTNQTLPF TQFI
Sbjct: 1   MKAAVGESGELKSSKSKPGMNRGLSILDFILRLAAIVGTLGNAIAMGTTNQTLPFSTQFI 60

Query: 61  QFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALL 120
           +FRAEYNDLPMFTFFVVANAIV+GYL LSLP+SIFHI+RSRAHGTRVLL+FL AGMMALL
Sbjct: 61  RFRAEYNDLPMFTFFVVANAIVTGYLVLSLPLSIFHIVRSRAHGTRVLLVFLGAGMMALL 120

Query: 121 TAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGA 180
           TAGASAAAAIVYLAH GN++TNWLSICQQFNSFCERISGSLIGSFA IVLFMVMIFLLGA
Sbjct: 121 TAGASAAAAIVYLAHKGNSRTNWLSICQQFNSFCERISGSLIGSFAGIVLFMVMIFLLGA 180

Query: 181 ALSRR 186
           ALSRR
Sbjct: 181 ALSRR 185

[Close]

BLAST of Lcy09g003690 vs. NCBI nr
Match: XP_022990598.1 (casparian strip membrane protein 1 [Cucurbita maxima])

HSP 1 Score: 312.4 bits (799), Expect = 2.7e-81
Identity = 165/186 (88.71%), Postives = 173/186 (93.01%), Query Frame = 0


Query: 1   MKAATGESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFI 60
           MKA   ESSELKSSK KPGVNRGLSILDFILRLAAIVGTLGSAI MGTTNQTLPF TQFI
Sbjct: 18  MKATMSESSELKSSKTKPGVNRGLSILDFILRLAAIVGTLGSAIAMGTTNQTLPFVTQFI 77

Query: 61  QFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALL 120
           QFRAEYND+PMFTFFVVANAIVSGYL LSLP SIFHILR+RAHGTRVLL+FLD GMMALL
Sbjct: 78  QFRAEYNDIPMFTFFVVANAIVSGYLVLSLPFSIFHILRNRAHGTRVLLVFLDGGMMALL 137

Query: 121 TAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGA 180
           T+GASAAAAIVYLAH GNAKTNWL++CQQFNSFCERISGSLIGSFAAI+LF+VMIFL G 
Sbjct: 138 TSGASAAAAIVYLAHKGNAKTNWLAVCQQFNSFCERISGSLIGSFAAIILFLVMIFLSGV 197

Query: 181 ALSRRR 187
           ALS RR
Sbjct: 198 ALSHRR 203

[Close]

BLAST of Lcy09g003690 vs. NCBI nr
Match: KAG7033177.1 (hypothetical protein SDJN02_07231, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.0 bits (798), Expect = 3.5e-81
Identity = 165/186 (88.71%), Postives = 173/186 (93.01%), Query Frame = 0


Query: 1   MKAATGESSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFI 60
           MKA   ESSELKSSK KPGVNRGLSILDFILRLAAIVGTLGSAI MGTTNQTLPF TQFI
Sbjct: 18  MKATMSESSELKSSKTKPGVNRGLSILDFILRLAAIVGTLGSAIAMGTTNQTLPFVTQFI 77

Query: 61  QFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALL 120
           QFRAEYND+PMFTFFVVANAIVSGYL LSLP SIFHILR+RAHGTRVLL+FLD GMMALL
Sbjct: 78  QFRAEYNDIPMFTFFVVANAIVSGYLVLSLPFSIFHILRNRAHGTRVLLVFLDGGMMALL 137

Query: 121 TAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGA 180
           T+GASAAAAIVYLAH GNAKTNWL++CQQFNSFCERISGSLIGSFAAI+L +VMIFL G 
Sbjct: 138 TSGASAAAAIVYLAHKGNAKTNWLAVCQQFNSFCERISGSLIGSFAAIILLLVMIFLSGV 197

Query: 181 ALSRRR 187
           ALSRRR
Sbjct: 198 ALSRRR 203

[Close]

BLAST of Lcy09g003690 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 222.2 bits (565), Expect = 3.4e-58
Identity = 118/186 (63.44%), Postives = 146/186 (78.49%), Query Frame = 0


Query: 1   MKAATGESSELKSSKIKPG-VNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQF 60
           MK+   E  E      K G ++R ++IL+FILR+ A   T+GSAI+MGTT++TLPFFTQF
Sbjct: 1   MKSGQAEIMETSKGIQKSGLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQF 60

Query: 61  IQFRAEYNDLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMAL 120
           I+F+AEYNDLP  TFFVVANA+VSGYL LSL ++  HI++ +   TR+LL+ LD  M+ L
Sbjct: 61  IRFQAEYNDLPALTFFVVANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGL 120

Query: 121 LTAGASAAAAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLG 180
           LT+GAS+AAAIVYLAHNGN KTNW +ICQQFNSFCERISGSLIGSF AIVL +++I L  
Sbjct: 121 LTSGASSAAAIVYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSA 180

Query: 181 AALSRR 186
            ALSRR
Sbjct: 181 IALSRR 186

[Close]

BLAST of Lcy09g003690 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 192.6 bits (488), Expect = 2.9e-49
Identity = 97/166 (58.43%), Postives = 126/166 (75.90%), Query Frame = 0


Query: 19  GVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFIQFRAEYNDLPMFTFFVVA 78
           G NRGL+I DF+LRLAAIV  L +A  MGT+++TLPFFTQF+QF A Y+DLP F FFV+A
Sbjct: 38  GYNRGLAIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIA 97

Query: 79  NAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALLTAGASAAAAIVYLAHNGN 138
            A+V GYL LSLP+S+  ILR  A   R+LLL LD G++AL TA AS+AAAI YLAH+GN
Sbjct: 98  MALVGGYLVLSLPISVVTILRPLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGN 157

Query: 139 AKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGAALSR 185
             TNWL ICQQF  FC++ SG+++ +F ++V F +++ + G AL R
Sbjct: 158 QNTNWLPICQQFGDFCQKSSGAVVSAFVSVVFFTILVVISGVALKR 203

[Close]

BLAST of Lcy09g003690 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 188.7 bits (478), Expect = 4.1e-48
Identity = 98/166 (59.04%), Postives = 123/166 (74.10%), Query Frame = 0


Query: 19  GVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFIQFRAEYNDLPMFTFFVVA 78
           G  RGLSI DF+LRLAAIV  L +A  MGT+++TLPFFTQF+QF A Y+DLP F FFVVA
Sbjct: 36  GYKRGLSIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVVA 95

Query: 79  NAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALLTAGASAAAAIVYLAHNGN 138
            AIV+GYL LSLP S+  I+R  A   R+LLL LD   +AL TA ASAAAAIVYLAHNGN
Sbjct: 96  IAIVAGYLVLSLPFSVVTIVRPLAVAPRLLLLVLDTAALALDTAAASAAAAIVYLAHNGN 155

Query: 139 AKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGAALSR 185
             TNWL ICQQF  FC++ SG+++ +FA++    +++ + G +L R
Sbjct: 156 TNTNWLPICQQFGDFCQKTSGAVVSAFASVTFLAILVVISGVSLKR 201

[Close]

BLAST of Lcy09g003690 vs. TAIR 10
Match: AT1G14160.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 181.0 bits (458), Expect = 8.6e-46
Identity = 94/177 (53.11%), Postives = 131/177 (74.01%), Query Frame = 0


Query: 8   SSELKSSKIKPGVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFIQFRAEYN 67
           S +L + + K  +N+G+S+L F+LRL A+ GT+GSA+ MGTT++++   +Q +  + +Y+
Sbjct: 32  SRKLITFEPKLVINKGISVLGFVLRLFAVFGTIGSALAMGTTHESVVSLSQLVLLKVKYS 91

Query: 68  DLPMFTFFVVANAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALLTAGASAA 127
           DLP   FFVVANAI  GYL LSLPVSIFHI  ++A  +R++LL +D  M+AL+++GASAA
Sbjct: 92  DLPTLMFFVVANAISGGYLVLSLPVSIFHIFSTQAKTSRIILLVVDTVMLALVSSGASAA 151

Query: 128 AAIVYLAHNGNAKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGAALSR 185
            A VYLAH GN   NW  ICQQF+ FCERISGSLIGSF A++L M+++     +LSR
Sbjct: 152 TATVYLAHEGNTTANWPPICQQFDGFCERISGSLIGSFCAVILLMLIVINSAISLSR 208

[Close]

BLAST of Lcy09g003690 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 169.5 bits (428), Expect = 2.6e-42
Identity = 89/166 (53.61%), Postives = 118/166 (71.08%), Query Frame = 0


Query: 19  GVNRGLSILDFILRLAAIVGTLGSAIVMGTTNQTLPFFTQFIQFRAEYNDLPMFTFFVVA 78
           G  RGL+I DF+LRLAAI  T+G+A VM T  +TLPFFTQF+QF+A Y+DLP F +FV+A
Sbjct: 40  GAKRGLAIFDFLLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIA 99

Query: 79  NAIVSGYLALSLPVSIFHILRSRAHGTRVLLLFLDAGMMALLTAGASAAAAIVYLAHNGN 138
            A+V+ YL LSLP SI  I+R  A   R++LL  D  ++ L T+ A+AAA+I YLAHNGN
Sbjct: 100 VAVVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGN 159

Query: 139 AKTNWLSICQQFNSFCERISGSLIGSFAAIVLFMVMIFLLGAALSR 185
             TNWL ICQQF  FC+ +S +++    AI+ F+V+I +   AL R
Sbjct: 160 QSTNWLPICQQFGDFCQNVSTAVVADSIAILFFIVLIIISAIALKR 205

The following BLAST results are available for this feature:

BLAST of Lcy09g003690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7PMY7	9.9e-63	69.19	Casparian strip membrane protein 3 OS=Vitis vinifera OX=29760 GN=VIT_14s0108g010...	[more]
B9I534	4.9e-62	67.74	Casparian strip membrane protein 6 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]
A2YAZ1	1.9e-61	68.16	Casparian strip membrane protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI...	[more]
Q67X40	1.9e-61	68.16	Casparian strip membrane protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]
P0DI54	1.2e-60	68.00	Casparian strip membrane protein 1 OS=Malus domestica OX=3750 PE=2 SV=1	[more]

BLAST of Lcy09g003690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRF2	3.4e-82	89.25	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456446 PE=3 SV=1	[more]
A0A6J1BYA1	4.4e-82	90.27	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006680 PE=3 SV=1	[more]
A0A6J1JTR2	1.3e-81	88.71	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487433 PE=3 SV=1	[more]
A0A1S3C9W9	4.6e-79	87.63	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498495 PE=3 SV=1	[more]
A0A5D3BNI0	3.9e-78	87.10	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00...	[more]

BLAST of Lcy09g003690 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602505.1	7.0e-82	89.25	hypothetical protein SDJN03_07738, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022954075.1	7.0e-82	89.25	casparian strip membrane protein 1 [Cucurbita moschata]	[more]
XP_022134430.1	9.1e-82	90.27	casparian strip membrane protein 1 [Momordica charantia]	[more]
XP_022990598.1	2.7e-81	88.71	casparian strip membrane protein 1 [Cucurbita maxima]	[more]
KAG7033177.1	3.5e-81	88.71	hypothetical protein SDJN02_07231, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lcy09g003690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15290.1	3.4e-58	63.44	Uncharacterised protein family (UPF0497)	[more]
AT3G11550.1	2.9e-49	58.43	Uncharacterised protein family (UPF0497)	[more]
AT5G06200.1	4.1e-48	59.04	Uncharacterised protein family (UPF0497)	[more]
AT1G14160.1	8.6e-46	53.11	Uncharacterised protein family (UPF0497)	[more]
AT2G36100.1	2.6e-42	53.61	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 22..170 e-value: 1.0E-48 score: 165.0
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 29..175 e-value: 2.6E-49 score: 165.0
None	No IPR available	PANTHER	PTHR11615:SF329	CASPARIAN STRIP MEMBRANE PROTEIN 5	coord: 11..185
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 11..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g003690.1	Lcy09g003690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007043	cell-cell junction assembly
biological_process	GO:0042545	cell wall modification
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding