Lcy09g003520 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g003520
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionTransmembrane protein 230
LocationChr09: 3063250 .. 3066455 (+)
RNA-Seq ExpressionLcy09g003520
SyntenyLcy09g003520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTAAACAAGCTTTTCTCTGACTTTTCATTTCGACGAGATTTCTCAGATTTCACGATCGATTTCCCATCGCCGTCTCTCGCCTCTTCTCTTCCGAGATTTCCTCTTTCAGGTAGAGCCTCCCACTTTTTCTGTTCCCGCTCTGGATTATTGGGATTCAATTAATACTTTTATGGCTCGACTCATTTCAATTCTCTGTTCGCTGTTTATACGGAGTGTTGTTAGATTTTTATGTTTATTCATTTTACCCTCTGATTAAAGGAAAGTAGAAGTATTCTATATGACAGTAATTTTCTGCGTTGAAATGGATTGTTTAAGATGGAAGTTTCATTAGGTTCCTTGTTATTAAAGCGGAGAAAAATTCCCGACTTTCTTTTAGCATTAGTGCATGGTTGAGGCAGAATGCATGACAGTTTTTTTTTTAGACTTTATTTTCATTTGTGCTTTTATTTTTCTCATTTGAATTGGTGGGTGATAATTTTAGTTTATGTGCGGTTTTGAGAAGGGTCGAAATTCACATTCTGTGTTTGTTACTGACAATCATGTCAATACTATAATTTCCTTTTTCATCCTCTCCTGAATGTCTTTGATTCATGATTTCTGAAGGTGGCTTGATTAAGTTGAAATTTGAAGACTGCATTCTTGAACTTCGCTTTCATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCCACGGATGATAACGATCTTGATTATGAAGGAAGTCAATATGACCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAGATCCCGTGGAAATCCATCGCTCTTGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGTATTGATGAAATTCTGTTTCATAATTTTCTTGCATGTAATAATTCTTTGTTATTTATTTCTATAGAATGCAGAGCGTCTACTCATTTAGCTTTCGTTTTTTTTTTATAAATCTTAGCTGCTTATTCAAATGCTGAATATAGGAAATCGAAGTTGAATGCTTGATTTTCTATCATTTGAAGGACTTGTGGCTGTGGCATTTATGAGAGCTGAAGTAAAACAACGGGAAAAAAACATGGAATGTAGTCTATAATGTTCTCAATGTGAAATTGGATGACCCTAAAGCCCTTCCAGTATTAGTTATATCCTGATTGTTTTACTTCCTTTTTGTGATCTAGTAGGTCTTCCTTTTATAATGATATGGATTTCTGCCGCATGTTTTAATCTTTGATAACTGTCCATCTTTCTTATATTTCAATTTATTTTTTTGGTTTCTTGTTGCATCTTTTCTCAAGTAAAAATAGAGACGCATCTAATAGGCCTTTCTGTTTCATGTCTTAACATGTTTATTTAATTGACGTGCTAGCCATATGTTATGTTTTCTTAAAAGAAAGAAACACAATCTTTTGAATTTTTAGAAATATGAAATAAATAGTATCCCTTTATTTAATTTTTTTTTATGATATTTGATATTTGTTAAGTCCGCAGAAAATGAAAAAAAGAACTTTCGTGTAAAATTGGAAATTTTATACTCTTTCATTTCTTAAAATTATTACATGCGACCTTGTTGTGTATGCTTCTTTATTGACCTGTATTGTATTGACGACGATGATTTGGTTTAACAGTCAGAGGACAAGATGTAATCCAATGGAATCATGGTTATGTATGATAATGATATAATATAGAAAGAGGGAAAGTTCCAGTCAAAGAAATTAGGAAAACACTCCAATTGGCACAGACGATGGTGCGAGAATATTTTACCCAAAAAAAAAGTCAATATTTCTTTATTAGAAAACTTGAAAGGATGCCGAATTCCAGAAAGAAAGTTTTTAACAAGAATTTTCGAACATATGGATCTCTTTTTACGTGAAGAATATTAGTTAATAGTGTTGTGCTACCAAGATTAATTGACTATGGATTTAATTTATTTGGTTTGTACGTCTAATGCAACTATGGTACTTGCTTCTGTCATCCTGTCGTGGACATTCTTGTTCCTAGAACTTTGATTCTTATTATTTTCACTTTTTCCTTTACGCAATGCCAAATGTATCCGGAAATCTACAATGGAGTATACATCAAAGTTCTGTTACTTCTGAAAATGACATCAGTAGAAGTGCCGTTGACTTATTCTGTCCTAGCAGTTTGGCAATCTGAGCAACTTTTGCTTTGTTGATGCAGGCTTTTATGAAACTAGGATTGCATATTATGCATGGAGGGGTGCTAATGGATATCGCTTCGCTTCCATTCCCGATTACTAGGTGTTCCTATCTTGATGGTGTATGCTTCTCTCATCTCTCTTTCAATGTAAAACTATCATATAACGTCAGAAAATGGTTTGTACAGAATCACGTCTCTTGAGTTTGTAACTTATTCACCTTGTATTCCTCTACCATAGCTTGTTTAGGGATAGAAAAACGATAAATCATGTAGCTGTAATATATTAACTTGACAAGTCTTTTATGTAGCTAAAACTCATGAAGCTTTTATGCCCATACAAAAGACTGAGATTATTCCCATGACTAACGGTGCGGAGCAAGGTTTATGCAGGACTTGGACTTTTCTGGATTACATCGTGCAGAAGAAAACGTAAAGATCAAACCTAGGTTGTTTCATACCAAAAGACTAGATGAATCTTTAGTTGTAGTTGATGCTTTTGTGAATGTTTTTTGTTATTGCACAGCATACTGTATAATCTGTATCTCTATTATACAACCGAAACTCTCCCGAACATCCGCTACCTCCTTCCCAATTGTGATGTCATTTTTTATTGATTTATTTGTTTAAGACTCTGATCACAGATTCACAGGTTTAGTTTTCTCCATCAACTCTCTAGTTGGATGCTCAAAAACCTTGACTGGTTATGTGAAAGGATATCTATAGCCTTTTTTGAGTAATAGAAAGATTTCTTTTTTTGGGTGGGGAGGAGGTAGGTGCTATAAATCGTTACTATTGTCCATATTTGAGCACAATCAAAAAACCAGTTGTAGATTGAAGAAATGTTTTAGCAGTGGACAAATTAAAAGATTTCTACGCTTTGTCTTTAAATGGCTTGCTGGGATCCCTACGATCCCACAAACTTATATTACAGTTTGTTTATTTTGTTTTTTAGGAAGCTGTTTA

mRNA sequence

ATCTAAACAAGCTTTTCTCTGACTTTTCATTTCGACGAGATTTCTCAGATTTCACGATCGATTTCCCATCGCCGTCTCTCGCCTCTTCTCTTCCGAGATTTCCTCTTTCAGGTGGCTTGATTAAGTTGAAATTTGAAGACTGCATTCTTGAACTTCGCTTTCATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCCACGGATGATAACGATCTTGATTATGAAGGAAGTCAATATGACCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAGATCCCGTGGAAATCCATCGCTCTTGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAAACTAGGATTGCATATTATGCATGGAGGGGTGCTAATGGATATCGCTTCGCTTCCATTCCCGATTACTAGGTGTTCCTATCTTGATGGTGACTTGGACTTTTCTGGATTACATCGTGCAGAAGAAAACGTAAAGATCAAACCTAGGTTGTTTCATACCAAAAGACTAGATGAATCTTTAGTTGTAGTTGATGCTTTTGTGAATGTTTTTTGTTATTGCACAGCATACTGTATAATCTGTATCTCTATTATACAACCGAAACTCTCCCGAACATCCGCTACCTCCTTCCCAATTGTGATGTCATTTTTTATTGATTTATTTGTTTAAGACTCTGATCACAGATTCACAGGTTTAGTTTTCTCCATCAACTCTCTAGTTGGATGCTCAAAAACCTTGACTGGTTATGTGAAAGGATATCTATAGCCTTTTTTGAGTAATAGAAAGATTTCTTTTTTTGGGTGGGGAGGAGGTAGGTGCTATAAATCGTTACTATTGTCCATATTTGAGCACAATCAAAAAACCAGTTGTAGATTGAAGAAATGTTTTAGCAGTGGACAAATTAAAAGATTTCTACGCTTTGTCTTTAAATGGCTTGCTGGGATCCCTACGATCCCACAAACTTATATTACAGTTTGTTTATTTTGTTTTTTAGGAAGCTGTTTA

Coding sequence (CDS)

ATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCCACGGATGATAACGATCTTGATTATGAAGGAAGTCAATATGACCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAGATCCCGTGGAAATCCATCGCTCTTGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAAACTAGGATTGCATATTATGCATGGAGGGGTGCTAATGGATATCGCTTCGCTTCCATTCCCGATTACTAG

Protein sequence

MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Homology
[Close]
BLAST of Lcy09g003520 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-14
Identity = 46/112 (41.07%), Postives = 68/112 (60.71%), Query Frame = 0 

Query: 7   VRYSSLA-TDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS LA TDD  +D +  +  P          KIP+K+IALA+ L ++G+ L+ +   +
Sbjct: 17  VKYSKLASTDDGYIDLQFKKSPP----------KIPYKAIALAVVLFMIGTFLIIIGALL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LAGYISKGGTDRAIPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]
BLAST of Lcy09g003520 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.1e-14
Identity = 47/112 (41.96%), Postives = 68/112 (60.71%), Query Frame = 0 

Query: 7   VRYSSLA-TDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS LA TDD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLASTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGTFLIIIGSLL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]
BLAST of Lcy09g003520 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.9e-14
Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 0 

Query: 7   VRYSSL-ATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L +TDD  +D +       F  TP    KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLSSTDDGYIDLQ-------FKKTP---PKIPYKAIALATVLFLIGAFLIIIGSLL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]
BLAST of Lcy09g003520 vs. ExPASy Swiss-Prot
Match: Q5BJP5 (Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.9e-14
Identity = 46/112 (41.07%), Postives = 68/112 (60.71%), Query Frame = 0 

Query: 7   VRYSSL-ATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L +TDD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLSSTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGTFLIIIGSLL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]
BLAST of Lcy09g003520 vs. ExPASy Swiss-Prot
Match: Q5E975 (Transmembrane protein 230 OS=Bos taurus OX=9913 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 9.0e-14
Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 0 

Query: 7   VRYSSL-ATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L +TDD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLSSTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGAFLIIIGSLL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LAGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]
BLAST of Lcy09g003520 vs. ExPASy TrEMBL
Match: A0A6J1HAY7 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 1   MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSLA DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]
BLAST of Lcy09g003520 vs. ExPASy TrEMBL
Match: A0A6J1JQW3 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111487526 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.2e-56
Identity = 112/116 (96.55%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 1   MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRR+VRYSSLA DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRSVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGY FASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYCFASIPDY 116

[Close]
BLAST of Lcy09g003520 vs. ExPASy TrEMBL
Match: A0A1S3C9X7 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.4e-56
Identity = 110/116 (94.83%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 1   MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRN+RYSSLA+DDND+D EGS++DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF
Sbjct: 1   MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]
BLAST of Lcy09g003520 vs. ExPASy TrEMBL
Match: A0A6J1K312 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 1   MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSL+TDDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]
BLAST of Lcy09g003520 vs. ExPASy TrEMBL
Match: A0A6J1FP54 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111445649 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 1   MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSL+TDDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]
BLAST of Lcy09g003520 vs. NCBI nr
Match: XP_023521905.1 (transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.8 bits (595), Expect = 7.5e-58
Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 1   MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSLA DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]
BLAST of Lcy09g003520 vs. NCBI nr
Match: XP_022961740.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembrane protein 230-like [Cucurbita moschata] >KAG6602515.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033189.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 232.3 bits (591), Expect = 2.2e-57
Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 1   MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSLA DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]
BLAST of Lcy09g003520 vs. NCBI nr
Match: XP_022990725.1 (transmembrane protein 230-like [Cucurbita maxima] >XP_022990726.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022990727.1 transmembrane protein 230-like [Cucurbita maxima])

HSP 1 Score: 228.8 bits (582), Expect = 2.4e-56
Identity = 112/116 (96.55%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 1   MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRR+VRYSSLA DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRSVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGY FASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYCFASIPDY 116

[Close]
BLAST of Lcy09g003520 vs. NCBI nr
Match: XP_008459349.1 (PREDICTED: transmembrane protein 230 [Cucumis melo])

HSP 1 Score: 226.9 bits (577), Expect = 9.2e-56
Identity = 110/116 (94.83%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 1   MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRN+RYSSLA+DDND+D EGS++DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF
Sbjct: 1   MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]
BLAST of Lcy09g003520 vs. NCBI nr
Match: XP_022939930.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022939931.1 transmembrane protein 230-like [Cucurbita moschata] >XP_022993688.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022993689.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022993690.1 transmembrane protein 230-like [Cucurbita maxima] >XP_023549544.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023549545.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >KAG6578563.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 225.3 bits (573), Expect = 2.7e-55
Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 1   MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSL+TDDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]
BLAST of Lcy09g003520 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 165.2 bits (417), Expect = 3.0e-41
Identity = 80/121 (66.12%), Postives = 94/121 (77.69%), Query Frame = 0 

Query: 1   MASRRNVRYSSLATDDNDLDY-----EGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLG 60
           MASRR+VRY+ L  D++D  Y     E   +DPRF Y+PKAFD++PWKSIALA+FLL LG
Sbjct: 1   MASRRSVRYAQLPGDEDDEGYGNGVGERRDFDPRFDYSPKAFDRVPWKSIALAVFLLFLG 60

Query: 61  SLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPD 117
            LLL LS+F+  GHM G+ SQ Y LL LG LTFLPGFYETRIAYY+WRGA GYRFA+IP 
Sbjct: 61  CLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPGFYETRIAYYSWRGAEGYRFAAIPS 120

[Close]
BLAST of Lcy09g003520 vs. TAIR 10
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 67.4 bits (163), Expect = 8.7e-12
Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 41  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY 100
           P K I+LA+ LL+ G+L + L +F+    + G++      + LG L F+PGFY TRIAYY
Sbjct: 28  PVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGDRGHGIFFIVLGCLLFIPGFYYTRIAYY 87

Query: 101 AWRGANGYRFASIP 115
           A++G  G+ F++IP
Sbjct: 88  AYKGYKGFSFSNIP 101

[Close]
BLAST of Lcy09g003520 vs. TAIR 10
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 0 

Query: 41  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY 100
           P K IALA+ LL+ G+L +   +F+    + G++      + LG L F+PGFY TRIAYY
Sbjct: 28  PVKEIALAVALLVFGTLGIVSGFFMAYNRVGGDRGHGIFFIVLGCLLFIPGFYYTRIAYY 87

Query: 101 AWRGANGYRFASIP 115
           A++G  G+ F++IP
Sbjct: 88  AYKGYKGFSFSNIP 101

The following BLAST results are available for this feature:
BLAST of Lcy09g003520 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5ZLH41.8e-1441.07Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1[more]
Q8CIB63.1e-1441.96Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1[more]
Q96A576.9e-1442.86Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1[more]
Q5BJP56.9e-1441.07Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1[more]
Q5E9759.0e-1441.07Transmembrane protein 230 OS=Bos taurus OX=9913 GN=TMEM230 PE=2 SV=1[more]
BLAST of Lcy09g003520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HAY71.1e-5797.41Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=... [more]
A0A6J1JQW31.2e-5696.55Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111487526 PE=3 SV=1[more]
A0A1S3C9X74.4e-5694.83Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1[more]
A0A6J1K3121.3e-5593.97Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1[more]
A0A6J1FP541.3e-5593.97Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111445649 PE=3 SV=... [more]
BLAST of Lcy09g003520 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023521905.17.5e-5898.28transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 tran... [more]
XP_022961740.12.2e-5797.41transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembran... [more]
XP_022990725.12.4e-5696.55transmembrane protein 230-like [Cucurbita maxima] >XP_022990726.1 transmembrane ... [more]
XP_008459349.19.2e-5694.83PREDICTED: transmembrane protein 230 [Cucumis melo][more]
XP_022939930.12.7e-5593.97transmembrane protein 230-like [Cucurbita moschata] >XP_022939931.1 transmembran... [more]
BLAST of Lcy09g003520 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G29170.13.0e-4166.12Eukaryotic protein of unknown function (DUF872) [more]
AT2G19350.18.7e-1243.24Eukaryotic protein of unknown function (DUF872) [more]
AT4G29850.11.5e-1143.24Eukaryotic protein of unknown function (DUF872) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008590Transmembrane protein 230/134PFAMPF05915DUF872coord: 40..116
e-value: 1.0E-25
score: 90.2
IPR044234Transmembrane protein 230PANTHERPTHR15664C20ORF30 PROTEINcoord: 1..116
NoneNo IPR availablePANTHERPTHR15664:SF0TRANSMEMBRANE PROTEIN 230coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g003520.1Lcy09g003520.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005776 autophagosome
cellular_component GO:0005768 endosome
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane