Lcy09g003460 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAAAAGGAGAAGCCTTTTCTCCTATATATGTGGTTCAAATTCACTCTCCCCTTCACCTTATAAAGCCTTGTTCCACTTCTCTTCATCCTCCAAGAAGAAGAAGAAACAGAAGCCACAAGCCACAGCTGCTGAATTCTCACAGATGGAAGCTTGTTTTTTGACCTCAAAACCCCATGTCAAGGCCACAATTTTCTCCAACTCCAAGCCCACTTCAAGAAAGTCCCCAACCCCATCTCTCAAAATTTCATGTAAGTCCTTCCACTCTCTTCTTTTTGCTTAAAAGCCCCTCTCTTGTCTTTTCTTTTCCCCATCATTAAGACCCCTTACATTTTTTTTTTTTTAACTTTTCTCTTTAGGTTGTCAATTTAAGTCACCATCAGAAGGTGATGATATTGATAGCAAGGATTGGAGATCCTTCAGAGCCAAGTTGATTGCTACTCAGAAACTCTCAACGCCTCAGATTTCATCTTCTTCTGTGGATCTTGACACGGTGGTCGATCATCCACCGTCCATCTCCATTGGTGACAGATGGGCCCATGTCATTCATGAGCCTGAAAGGGGATGCCTTCTCATTGCAACAGAGAAGCTTGATGGAGTCCACATCTTTGAACGGACGGTTGTCCTTGTGTTATCAAATGGGCCATTGGGCCCATCAGGGATCATACTAAACAGGCCTTCCTTAATGTCCATCAAGGAGACGAGGTCCACGGCGCTCGACGTGGCGGGCACGTTCTCGGACCGGCCTTTGTTCTTCGGTGGGCCGTTGGAAGAGGGGCTGTTTTTGGTGAGCCCAAAGAGGGGAGAGGATGATGGGGTTGGGAAGAGTGGGATCTTTGAAGAAGTAATGAAAGGATTGTATTATGGGACTAAGGAGAGTGTTGGGTGTGCATCAGAAATGGTGAAGAGGAAATTGGTTGGGCCTGAAGATTTCAGGTTCTTTGATGGCTACTGTGGGTGGGAGAAGGACCAATTGAAAGATGAAATTAAAGCTGGTTATTGGACTGTGGCTGCTTGTAGTCCAAGTGTGATTGGAATGGATGTGGGAAGTGTGGGCCTTTGGGAGGAAGTACTTGGCCTTGTGGGTCCTAAAAAGGTTTGGTGAGGTGTTGATATGATACCAACAAAGCCCAAGGAAAGGGTTTTACAAAAGGCCCAATTTCTTGGGGTTGCAGGTCTGAGGTCAGACTTGTTGAATGCTGTGCTACCTTTTTTTCTTTTGGATAATTTCTAACATTTTCCACAAAGAGGAATCAATGTATAAATTTCAAACAATTATTTGTCAATTTAAGAGGGTGCATTAGTCTTGCCAATCTTAGTACTGTATTCTCAATCAAAAGGAAATATATCGCTCATTCCAGACACTTAAATACACATCTCATTTTCCAACTGATAAACACTCAAATAATACATTCTCATTCTTGACATTACATTCATTTTCAACTCCACATTTTTCTTGAGAAACATGATCTCTCTTGTAAGAGGAAGAGATATCAAAGAGAGAAAGATAAATATATCTAATTCTTGACACTCCATATACATCCAATTTTCCAACTGCACTCTCCACATTGATTTCCAGTTCCATGTCTTTCCTTGGAGATGATAGATATAGAATAATATTGAATGAATGGCTTAACAAAGAATGGTTACTATTCAAGATGGTCATGTGGCCTGAATGACATGAACATTGCAGCATACTGCAGAAGCCGACGTTCATTGCTTCCATTTTCCACCACAGCTATCACTGGACGTCTCATCCTCTTTCGGTAGCGACGCCAAGCAAATTGTATGTTCACAGCAGCCCATGTTCTCCAGTTTGAAGAGTAGTATCTTGCTGTTCTCTTAAGTCGCTCGTTGGCGAATTTGTAGCGGAAGTGATCGGTTATGTATTTCAGATGGTCTGCTTTCAGGGCAAATGCTTCTGTTGGTTCAATGCAAACAAATGTAGCTGATGAAGCTGGAAGCCTCTCGAGAAATGGGCGCCGGAGACACCACGATAGCAGCTCGTCGCCGAGAAATCCTCCTGGTTCAATCAAACTTGTTGCTGTCATGCCCTTGCTCAGGCTTTGGCTACGTTTTATACGGCCGCACACTATGAATAACATCCTTGGAACAGGATCTCCTTCTCTGATGATCTGTTTTATGGAAACATCAATATTAGTCCATCTTCGACGATAATAGCGGATGGCCGACGACTTGGTTTGACATGTACCTTTTCATCTTTAGAGAATACAAGTGGCTTGACTCGATCGCAGATGTTGTCGAGAATAAGCTCATCCAGGTTTTGGAACAGAGGCACCTTTGCATTGATGACAGTTAAATAAGGAAGCAGAACTTCAACCACAAGCTTTCTCTAATCCTAAAGAGATCCTCAAGAGAGAAAAGCTATTCGTTCTAGTTACCTTTCTGATGAGATCAACACAAAGATGACGTTTAATGTCTCTTCTAAGACCTTCAGGCAAATCATTGATTAGCTCCATCTCATCTTCCCCGCCCATGGCTGCCCATCTCTGGTGTTCATAGTGTCGAACTCGTTGTCTCAAACGAGACGGCAATTGTCGTCTCCTCATCCACCACTCCAAATCTCGACATCTCAGCTGCATTTTTCGCCTCCTTGCCATGACGGCGTGCAAAAGAACCTTTTTGAAGAAACGGGAAGGACTTGTTGTCAACAGAAGAGGAAAACTTTTAGCTACATTTGCACAAGCAAACTCACCTGGATATTACCAATCAAAAGAGTGAAAAGCAGCAGTCCACTGAGCACTGTGCAAATACTGAAGCATACTTCCAGCCAATTACTCGTGGGCTCGAGATCATTGCCAAAGGTGCTGCAACATTTAAAGCATCATTATCAAGAAACATAGTGCATAAATCTCGTTTGAAAAGCATTGCTTCTTGACTTA TAAAAAAGGAGAAGCCTTTTCTCCTATATATGTGGTTCAAATTCACTCTCCCCTTCACCTTATAAAGCCTTGTTCCACTTCTCTTCATCCTCCAAGAAGAAGAAGAAACAGAAGCCACAAGCCACAGCTGCTGAATTCTCACAGATGGAAGCTTGTTTTTTGACCTCAAAACCCCATGTCAAGGCCACAATTTTCTCCAACTCCAAGCCCACTTCAAGAAAGTCCCCAACCCCATCTCTCAAAATTTCATGTTGTCAATTTAAGTCACCATCAGAAGGTGATGATATTGATAGCAAGGATTGGAGATCCTTCAGAGCCAAGTTGATTGCTACTCAGAAACTCTCAACGCCTCAGATTTCATCTTCTTCTGTGGATCTTGACACGGTGGTCGATCATCCACCGTCCATCTCCATTGGTGACAGATGGGCCCATGTCATTCATGAGCCTGAAAGGGGATGCCTTCTCATTGCAACAGAGAAGCTTGATGGAGTCCACATCTTTGAACGGACGGTTGTCCTTGTGTTATCAAATGGGCCATTGGGCCCATCAGGGATCATACTAAACAGGCCTTCCTTAATGTCCATCAAGGAGACGAGGTCCACGGCGCTCGACGTGGCGGGCACGTTCTCGGACCGGCCTTTGTTCTTCGGTGGGCCGTTGGAAGAGGGGCTGTTTTTGGTGAGCCCAAAGAGGGGAGAGGATGATGGGGTTGGGAAGAGTGGGATCTTTGAAGAAGTAATGAAAGGATTGTATTATGGGACTAAGGAGAGTGTTGGGTGTGCATCAGAAATGGTGAAGAGGAAATTGGTTGGGCCTGAAGATTTCAGGTTCTTTGATGGCTACTGTGGGTGGGAGAAGGACCAATTGAAAGATGAAATTAAAGCTGGTTATTGGACTGTGGCTGCTTGTAGTCCAAGTGTGATTGGAATGGATGTGGGAAGTGTGGGCCTTTGGGAGGAAGTACTTGGCCTTGTGGGTCCTAAAAAGGTTTGGTGAGGTGTTGATATGATACCAACAAAGCCCAAGGAAAGGGTTTTACAAAAGGCCCAATTTCTTGGGGTTGCAGGTCTGAGGTCAGACTTGTTGAATGCTGTGCTACCTTTTTTTCTTTTGGATAATTTCTAACATTTTCCACAAAGAGGAATCAATGTATAAATTTCAAACAATTATTTGTCAATTTAAGAGGGTGCATTAGTCTTGCCAATCTTAGTACTGTATTCTCAATCAAAAGGAAATATATCGCTCATTCCAGACACTTAAATACACATCTCATTTTCCAACTGATAAACACTCAAATAATACATTCTCATTCTTGACATTACATTCATTTTCAACTCCACATTTTTCTTGAGAAACATGATCTCTCTTGTAAGAGGAAGAGATATCAAAGAGAGAAAGATAAATATATCTAATTCTTGACACTCCATATACATCCAATTTTCCAACTGCACTCTCCACATTGATTTCCAGTTCCATGTCTTTCCTTGGAGATGATAGATATAGAATAATATTGAATGAATGGCTTAACAAAGAATGGTTACTATTCAAGATGGTCATGTGGCCTGAATGACATGAACATTGCAGCATACTGCAGAAGCCGACGTTCATTGCTTCCATTTTCCACCACAGCTATCACTGGACGTCTCATCCTCTTTCGGTAGCGACGCCAAGCAAATTGTATGTTCACAGCAGCCCATGTTCTCCAGTTTGAAGAGTAGTATCTTGCTGTTCTCTTAAGTCGCTCGTTGGCGAATTTGTAGCGGAAGTGATCGGTTATGTATTTCAGATGGTCTGCTTTCAGGGCAAATGCTTCTGTTGGTTCAATGCAAACAAATGTAGCTGATGAAGCTGGAAGCCTCTCGAGAAATGGGCGCCGGAGACACCACGATAGCAGCTCGTCGCCGAGAAATCCTCCTGGTTCAATCAAACTTGTTGCTGTCATGCCCTTGCTCAGGCTTTGGCTACGTTTTATACGGCCGCACACTATGAATAACATCCTTGGAACAGGATCTCCTTCTCTGATGATCTGTTTTATGGAAACATCAATATTAGTCCATCTTCGACGATAATAGCGGATGGCCGACGACTTGGTTTGACATGTACCTTTTCATCTTTAGAGAATACAAGTGGCTTGACTCGATCGCAGATGTTGTCGAGAATAAGCTCATCCAGGTTTTGGAACAGAGGCACCTTTGCATTGATGACAGTTAAATAAGGAAGCAGAACTTCAACCACAAGCTTTCTCTAATCCTAAAGAGATCCTCAAGAGAGAAAAGCTATTCGTTCTAGTTACCTTTCTGATGAGATCAACACAAAGATGACGTTTAATGTCTCTTCTAAGACCTTCAGGCAAATCATTGATTAGCTCCATCTCATCTTCCCCGCCCATGGCTGCCCATCTCTGGTGTTCATAGTGTCGAACTCGTTGTCTCAAACGAGACGGCAATTGTCGTCTCCTCATCCACCACTCCAAATCTCGACATCTCAGCTGCATTTTTCGCCTCCTTGCCATGACGGCGTGCAAAAGAACCTTTTTGAAGAAACGGGAAGGACTTGTTGTCAACAGAAGAGGAAAACTTTTAGCTACATTTGCACAAGCAAACTCACCTGGATATTACCAATCAAAAGAGTGAAAAGCAGCAGTCCACTGAGCACTGTGCAAATACTGAAGCATACTTCCAGCCAATTACTCGTGGGCTCGAGATCATTGCCAAAGGTGCTGCAACATTTAAAGCATCATTATCAAGAAACATAGTGCATAAATCTCGTTTGAAAAGCATTGCTTCTTGACTTA ATGGAAGCTTGTTTTTTGACCTCAAAACCCCATGTCAAGGCCACAATTTTCTCCAACTCCAAGCCCACTTCAAGAAAGTCCCCAACCCCATCTCTCAAAATTTCATGTTGTCAATTTAAGTCACCATCAGAAGGTGATGATATTGATAGCAAGGATTGGAGATCCTTCAGAGCCAAGTTGATTGCTACTCAGAAACTCTCAACGCCTCAGATTTCATCTTCTTCTGTGGATCTTGACACGGTGGTCGATCATCCACCGTCCATCTCCATTGGTGACAGATGGGCCCATGTCATTCATGAGCCTGAAAGGGGATGCCTTCTCATTGCAACAGAGAAGCTTGATGGAGTCCACATCTTTGAACGGACGGTTGTCCTTGTGTTATCAAATGGGCCATTGGGCCCATCAGGGATCATACTAAACAGGCCTTCCTTAATGTCCATCAAGGAGACGAGGTCCACGGCGCTCGACGTGGCGGGCACGTTCTCGGACCGGCCTTTGTTCTTCGGTGGGCCGTTGGAAGAGGGGCTGTTTTTGGTGAGCCCAAAGAGGGGAGAGGATGATGGGGTTGGGAAGAGTGGGATCTTTGAAGAAGTAATGAAAGGATTGTATTATGGGACTAAGGAGAGTGTTGGGTGTGCATCAGAAATGGTGAAGAGGAAATTGGTTGGGCCTGAAGATTTCAGGTTCTTTGATGGCTACTGTGGGTGGGAGAAGGACCAATTGAAAGATGAAATTAAAGCTGGTTATTGGACTGTGGCTGCTTGTAGTCCAAGTGTGATTGGAATGGATGTGGGAAGTGTGGGCCTTTGGGAGGAAGTACTTGGCCTTGTGGGTCCTAAAAAGGTTTGGTGA MEACFLTSKPHVKATIFSNSKPTSRKSPTPSLKISCCQFKSPSEGDDIDSKDWRSFRAKLIATQKLSTPQISSSSVDLDTVVDHPPSISIGDRWAHVIHEPERGCLLIATEKLDGVHIFERTVVLVLSNGPLGPSGIILNRPSLMSIKETRSTALDVAGTFSDRPLFFGGPLEEGLFLVSPKRGEDDGVGKSGIFEEVMKGLYYGTKESVGCASEMVKRKLVGPEDFRFFDGYCGWEKDQLKDEIKAGYWTVAACSPSVIGMDVGSVGLWEEVLGLVGPKKVW Homology
BLAST of Lcy09g003460 vs. ExPASy Swiss-Prot
Match: Q3B561 (UPF0301 protein Plut_0637 OS=Pelodictyon luteolum (strain DSM 273 / 2530) OX=319225 GN=Plut_0637 PE=3 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.4e-14 Identity = 54/160 (33.75%), Postives = 83/160 (51.88%), Query Frame = 0
BLAST of Lcy09g003460 vs. ExPASy Swiss-Prot
Match: B3QMC9 (UPF0301 protein Cpar_0662 OS=Chlorobaculum parvum (strain DSM 263 / NCIMB 8327) OX=517417 GN=Cpar_0662 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.2e-13 Identity = 55/163 (33.74%), Postives = 80/163 (49.08%), Query Frame = 0
BLAST of Lcy09g003460 vs. ExPASy Swiss-Prot
Match: A1BEV6 (UPF0301 protein Cpha266_0885 OS=Chlorobium phaeobacteroides (strain DSM 266) OX=290317 GN=Cpha266_0885 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.2e-12 Identity = 52/164 (31.71%), Postives = 80/164 (48.78%), Query Frame = 0
BLAST of Lcy09g003460 vs. ExPASy Swiss-Prot
Match: Q3AQ69 (UPF0301 protein Cag_1601 OS=Chlorobium chlorochromatii (strain CaD3) OX=340177 GN=Cag_1601 PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11 Identity = 49/146 (33.56%), Postives = 71/146 (48.63%), Query Frame = 0
BLAST of Lcy09g003460 vs. ExPASy Swiss-Prot
Match: B3EHS7 (UPF0301 protein Clim_0777 OS=Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330) OX=290315 GN=Clim_0777 PE=3 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.7e-11 Identity = 51/160 (31.87%), Postives = 76/160 (47.50%), Query Frame = 0
BLAST of Lcy09g003460 vs. ExPASy TrEMBL
Match: A0A6J1H122 (uncharacterized protein LOC111459174 OS=Cucurbita moschata OX=3662 GN=LOC111459174 PE=4 SV=1) HSP 1 Score: 477.2 bits (1227), Expect = 4.6e-131 Identity = 235/286 (82.17%), Postives = 257/286 (89.86%), Query Frame = 0
BLAST of Lcy09g003460 vs. ExPASy TrEMBL
Match: A0A6J1JV89 (uncharacterized protein LOC111487806 OS=Cucurbita maxima OX=3661 GN=LOC111487806 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 7.3e-129 Identity = 232/286 (81.12%), Postives = 255/286 (89.16%), Query Frame = 0
BLAST of Lcy09g003460 vs. ExPASy TrEMBL
Match: A0A6J1BXF0 (uncharacterized protein LOC111006569 OS=Momordica charantia OX=3673 GN=LOC111006569 PE=4 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 2.8e-128 Identity = 233/286 (81.47%), Postives = 252/286 (88.11%), Query Frame = 0
BLAST of Lcy09g003460 vs. ExPASy TrEMBL
Match: A0A0A0KSE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638340 PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 4.5e-126 Identity = 224/284 (78.87%), Postives = 253/284 (89.08%), Query Frame = 0
BLAST of Lcy09g003460 vs. ExPASy TrEMBL
Match: A0A5D3BNG2 (UPF0301 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002600 PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 7.6e-126 Identity = 227/286 (79.37%), Postives = 254/286 (88.81%), Query Frame = 0
BLAST of Lcy09g003460 vs. NCBI nr
Match: XP_022957718.1 (uncharacterized protein LOC111459174 [Cucurbita moschata]) HSP 1 Score: 477.2 bits (1227), Expect = 9.5e-131 Identity = 235/286 (82.17%), Postives = 257/286 (89.86%), Query Frame = 0
BLAST of Lcy09g003460 vs. NCBI nr
Match: XP_023551710.1 (uncharacterized protein LOC111809579 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 476.9 bits (1226), Expect = 1.2e-130 Identity = 233/285 (81.75%), Postives = 256/285 (89.82%), Query Frame = 0
BLAST of Lcy09g003460 vs. NCBI nr
Match: KAG6602523.1 (hypothetical protein SDJN03_07756, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 475.7 bits (1223), Expect = 2.8e-130 Identity = 235/286 (82.17%), Postives = 257/286 (89.86%), Query Frame = 0
BLAST of Lcy09g003460 vs. NCBI nr
Match: KAG7033195.1 (hypothetical protein SDJN02_07249, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 475.7 bits (1223), Expect = 2.8e-130 Identity = 234/286 (81.82%), Postives = 257/286 (89.86%), Query Frame = 0
BLAST of Lcy09g003460 vs. NCBI nr
Match: XP_022991113.1 (uncharacterized protein LOC111487806 [Cucurbita maxima]) HSP 1 Score: 469.9 bits (1208), Expect = 1.5e-128 Identity = 232/286 (81.12%), Postives = 255/286 (89.16%), Query Frame = 0
BLAST of Lcy09g003460 vs. TAIR 10
Match: AT3G29240.1 (Protein of unknown function (DUF179) ) HSP 1 Score: 339.7 bits (870), Expect = 2.2e-93 Identity = 184/312 (58.97%), Postives = 220/312 (70.51%), Query Frame = 0
BLAST of Lcy09g003460 vs. TAIR 10
Match: AT3G29240.2 (Protein of unknown function (DUF179) ) HSP 1 Score: 339.7 bits (870), Expect = 2.2e-93 Identity = 184/312 (58.97%), Postives = 220/312 (70.51%), Query Frame = 0
BLAST of Lcy09g003460 vs. TAIR 10
Match: AT1G33780.1 (Protein of unknown function (DUF179) ) HSP 1 Score: 186.0 bits (471), Expect = 4.1e-47 Identity = 112/287 (39.02%), Postives = 160/287 (55.75%), Query Frame = 0
BLAST of Lcy09g003460 vs. TAIR 10
Match: AT3G19780.1 (LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in 32 species: Archae - 0; Bacteria - 24; Metazoa - 11; Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 75.5 bits (184), Expect = 7.8e-14 Identity = 54/197 (27.41%), Postives = 94/197 (47.72%), Query Frame = 0
BLAST of Lcy09g003460 vs. TAIR 10
Match: AT3G19780.2 (LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1). ) HSP 1 Score: 75.5 bits (184), Expect = 7.8e-14 Identity = 54/197 (27.41%), Postives = 94/197 (47.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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