Lcy09g003250 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g003250
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein SPIRAL1-like 3
Location	Chr09: 2806854 .. 2809223 (-)
RNA-Seq Expression	Lcy09g003250
Synteny	Lcy09g003250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCTGGTTGTGGCCTGTGCTGCGAAGGTGCTCTGCTGGATTCCATCGTTTAGCTCCTTATCTCTATTCTCTTCCTTTTGATCCCATTTTCATTCCGAGAAGATTTTCGAGGTACCCTCTTCAAATTTCTACTTTCCCATTTCAGATCCACATTTCTTTTTTTGTTTTTCCACCGATCTGATCTTTTCTTCCTACTTTCCCGCACTCCATTTTGATTATACTTGATTCAATGTCTGTGTTGTTTTGAATTACCATTTCCATTTATGTTCTTTAATCTTTAATGACGAAGATGAGTTTTAATGAGGTTGAAATGAAATGTGATCCTTGTTTTGGTTTTGAATGAATTGAATTGTCGAAATGCTTGTTGCCGGATGCCGTGTGAGCTTAAGATTATATCACAATTGTGGGTAATAGGCTTGTTAGAAGAAAACTGGGGATATTTGAAGCATGATACGAATCATGCATAGAAATGAAGAATTCATACTGTGTGGCTCTCAATTCGCCAAGTATATGGTAAATGATATAGGTATTAGTTTATTGTCAGCTGATTAATATAGCTGTCAATTCGCCATCAGAGAGAAGAGCAATAGTTTTTTAATTGATAAATTTCTACTCAGGAAGATACACAATAGATTTTTAATGTAGTTTTGGTAATCAATTGTGGTTGTAGCTTTGTGACTTATTCTATTATTCATTGAAATTCAAATTAATATTGTAGAGCCGGCTTGGTAGTTTTCAACAAGTGCCAAATGGTCGTGGTAGCTCTTTACCTTGTTATTTTATTAATTAAATGATATGATTGAATTGATAGTCTTAAACAAGAGGCTTTGGGATCATGAGTTTGTGCTTAAATATGCATGCGTTTTCTGTATTTTGTTGCTGCATATGCCAAATGCATTATATTGTACTTTATGCCTATGATCGCTATAAATACATCTGAGTTTTATGTTGTTGTATTAAAAGGAGAAACAAAAGGCTTGAAAATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGAACTACCTGTTTGGAGGTGGAGAACCAGCCAACAATGTGCAAGCTTCTCAGAAACCCAATGGATCTTCTCAGCCTACCTCTTCTACCTCGCAACCTACTGATAAGAAGATACCTGCTGGCATTCCAGGGAATCTTACTAACAATTACTATCGAGCGGATGGACAGAACTGTGGCAACTTTATCACGGTATAGGCTCCTTGTTTACTTGTTGGCTTAAAATGTTTCATGTGACCTTCCACCGTCATATATATATATAACTTCACAACTCATAAGAAAAACATCAAGTTGTGATGCTTGGACAAATTGAGAAATCAATCTGACTCCCTTGATTTGTGTTTTTGCTGTACTAATTGGGTTAACTGTGTTGAAGAAAATGTTTAAGTTGGGGTAATCTTAAATAAGCATGGCGAGTGATGGGCCAAAAGTGAAGGCAGAGGGATAACTGAGGCCATAGTTGGAGAGAAAAGAGCTAAAACAGTAGGCAGAGAAGAATGCTGGACCAAAAATGAACGTACGGAGGAAATACCTTAAACATTAGGCAGAGTGATCTCATTAAACCAAAGGGTGAAGAAAGCACTGTACCAGTAACATACAGGAGCTTCTCACCTGCTAATTTCTTAGAACTTCTTCCCTGGGGATGTAACCAATAAAAATTTATGGCCATGAAAGACGTGCTCGAGAACATTAACTATTAAGATTATATATGGATGAGCCCAAATGACGCAAAGTACTGATGAGATCCTCAATATTGCAGAAGCACATCACTAATTCACAACTAACTTGGATGGCACTTTACTGTTTTAGTTTTAAATCTGAGAAAGATCCCGTTTCCATCTGAACATCGTTTCTTTGAAGTGTTCTGGTTCTGAATCAATGGGAAACCATGGCTTTATTTCAATTTAGAATCCCCCATTTACTTCTAACCATTGGAATTTAAATGTTGTGCTTGTGTTGGCAGGATCGTCCATCGACCAAGGTTCATGCTGCACCTGGCGGTGGATCTTCTCTGGATTTCCTTTTCGGAAGTGGTAGGAACTAAGCTGGTTAAGAACCAAGAAAGACCCTTCATTGGCGCTTTATCATATGTAAACTAGAAAATTATATCTACCTTTGAAATGCTTAGACTTTTTGTGTCTTTGAAATTGTGATATTTTCTTATGCACGAGGTTGTCTCCTCATAGTCAGAATTTCAGACATGCTTGCTGCTGAACTTGTATGGTTGGCTCTTGATGCTTTGTTTGAAACAAAAGTGATAATTGTATCTTGCTCTGCTCTGAATCTCTGGCATTTGTTTCTTACTAAACTTTTATGTTTGGCTCTTGCATCTTTTTAGGATTAAGGGCT

mRNA sequence

ATCTCTGGTTGTGGCCTGTGCTGCGAAGGTGCTCTGCTGGATTCCATCGTTTAGCTCCTTATCTCTATTCTCTTCCTTTTGATCCCATTTTCATTCCGAGAAGATTTTCGAGGTACCCTCTTCAAATTTCTACTTTCCCATTTCAGATCCACATTTCTTTTTTTGTTTTTCCACCGATCTGATCTTTTCTTCCTACTTTCCCGCACTCCATTTTGATTATACTTGATTCAATGTCTGTGTTGTTTTGAATTACCATTTCCATTTATGTTCTTTAATCTTTAATGACGAAGATGAGTTTTAATGAGGTTGAAATGAAATGTGATCCTTGTTTTGGTTTTGAATGAATTGAATTGTCGAAATGCTTGTTGCCGGATGCCGTGTGAGCTTAAGATTATATCACAATTGTGGGTAATAGGCTTGTTAGAAGAAAACTGGGGATATTTGAAGCATGATACGAATCATGCATAGAAATGAAGAATTCATACTGTGTGGCTCTCAATTCGCCAAGTATATGGTAAATGATATAGGAGAAACAAAAGGCTTGAAAATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGAACTACCTGTTTGGAGGTGGAGAACCAGCCAACAATGTGCAAGCTTCTCAGAAACCCAATGGATCTTCTCAGCCTACCTCTTCTACCTCGCAACCTACTGATAAGAAGATACCTGCTGGCATTCCAGGGAATCTTACTAACAATTACTATCGAGCGGATGGACAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAGGTTCATGCTGCACCTGGCGGTGGATCTTCTCTGGATTTCCTTTTCGGAAGTGGTAGGAACTAAGCTGGTTAAGAACCAAGAAAGACCCTTCATTGGCGCTTTATCATATGTAAACTAGAAAATTATATCTACCTTTGAAATGCTTAGACTTTTTGTGTCTTTGAAATTGTGATATTTTCTTATGCACGAGGTTGTCTCCTCATAGTCAGAATTTCAGACATGCTTGCTGCTGAACTTGTATGGTTGGCTCTTGATGCTTTGTTTGAAACAAAAGTGATAATTGTATCTTGCTCTGCTCTGAATCTCTGGCATTTGTTTCTTACTAAACTTTTATGTTTGGCTCTTGCATCTTTTTAGGATTAAGGGCT

Coding sequence (CDS)

ATGATACGAATCATGCATAGAAATGAAGAATTCATACTGTGTGGCTCTCAATTCGCCAAGTATATGGTAAATGATATAGGAGAAACAAAAGGCTTGAAAATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGAACTACCTGTTTGGAGGTGGAGAACCAGCCAACAATGTGCAAGCTTCTCAGAAACCCAATGGATCTTCTCAGCCTACCTCTTCTACCTCGCAACCTACTGATAAGAAGATACCTGCTGGCATTCCAGGGAATCTTACTAACAATTACTATCGAGCGGATGGACAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAGGTTCATGCTGCACCTGGCGGTGGATCTTCTCTGGATTTCCTTTTCGGAAGTGGTAGGAACTAA

Protein sequence

MIRIMHRNEEFILCGSQFAKYMVNDIGETKGLKMGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN

Homology

[Close]

BLAST of Lcy09g003250 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 8.3e-27
Identity = 64/102 (62.75%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLT 93
           MGRGVSSGGGQSSL YLFGGGE     ++++KP    +P  S+S    K+IPAGI  +  
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEAP---KSAEKPAPVQKPAPSSSAEKLKEIPAGIQSSKA 60

Query: 94  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
           NNY RA+GQNCGNF+TDRPSTKV AAPGGGSSLD+LF   ++
Sbjct: 61  NNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLFSGNKD 99

[Close]

BLAST of Lcy09g003250 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.7e-25
Identity = 66/110 (60.00%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGE-PANNVQASQKPNGSSQPTSSTSQP---------TDKK 93
           MGRGVS GGGQSSL YLFG GE P   +  +  P+  + P S+   P           K+
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQ 60

Query: 94  IPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG 134
           IPAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGGSSLD+LFG G
Sbjct: 61  IPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGG 110

[Close]

BLAST of Lcy09g003250 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.5e-25
Identity = 63/110 (57.27%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGE-----PANNVQASQKPNGSSQPT---SSTSQPTDKKIP 93
           MGRGVS+GGGQSSL YLFG GE       N   A  + +  + PT   ++ +  + K++P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 94  AGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
           AG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G N
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

[Close]

BLAST of Lcy09g003250 vs. ExPASy Swiss-Prot
Match: Q2R0W8 (Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.0e-24
Identity = 63/110 (57.27%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 35  GRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPT-------------SSTSQPTD 94
           GRGVSSGGGQSSL YLFGGGE A   +A        + T             S ++    
Sbjct: 4   GRGVSSGGGQSSLGYLFGGGETAPAAKAKPAAAAEKETTPAPVKKAAVAAAASPSAAEKM 63

Query: 95  KKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 132
           K+IPAGI     NNY+RA GQNCGNF+TDRPSTKVHAAPGGGSSL +LFG
Sbjct: 64  KEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFG 113

[Close]

BLAST of Lcy09g003250 vs. ExPASy Swiss-Prot
Match: Q9LF22 (Protein SPIRAL1-like 4 OS=Arabidopsis thaliana OX=3702 GN=SP1L4 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-21
Identity = 61/120 (50.83%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 36  RGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLT-- 95
           RGV+SGGG+SSL YLFG GE   +V    KPN  +  T++T+  T      G P   T  
Sbjct: 5   RGVNSGGGESSLGYLFGSGE---SVPKPNKPNAKTGFTTTTTTTTTTDGAGGRPKTTTTT 64

Query: 96  --------------------NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG 134
                               NNYYR+DGQNCGNF+T+RPSTKVHAAPGGGSSL +LFGSG
Sbjct: 65  TTTGDKNKTEENSAGVRGSPNNYYRSDGQNCGNFLTERPSTKVHAAPGGGSSLGYLFGSG 121

[Close]

BLAST of Lcy09g003250 vs. ExPASy TrEMBL
Match: A0A6J1JRI1 (protein SPIRAL1-like 3 OS=Cucurbita maxima OX=3661 GN=LOC111487687 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.0e-44
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLT 93
           MGRGVSSGGGQSSL YLFGGGEPANNVQAS+KPNGSSQPTSSTSQP DK IPAGIPGN T
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 94  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
           NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG+G++
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Lcy09g003250 vs. ExPASy TrEMBL
Match: A0A6J1GRA9 (protein SPIRAL1-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111456744 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.0e-44
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLT 93
           MGRGVSSGGGQSSL YLFGGGEPANNVQAS+KPNGSSQPTSSTSQP DK IPAGIPGN T
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 94  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
           NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG+G++
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Lcy09g003250 vs. ExPASy TrEMBL
Match: A0A6J1BYY1 (protein SPIRAL1-like 3 OS=Momordica charantia OX=3673 GN=LOC111006740 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 5.0e-43
Identity = 94/106 (88.68%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKI----PAGIP 93
           MGRGVSSGGGQSSL YLFGGGEPANNVQASQKPNGSSQPTSST+Q TDK I    PAGIP
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIP 60

Query: 94  GNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
            N TNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG+GR+
Sbjct: 61  ANCTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 106

[Close]

BLAST of Lcy09g003250 vs. ExPASy TrEMBL
Match: A0A5C7HMB5 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015768 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.7e-33
Identity = 80/109 (73.39%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 32  LKMGRGVSSGGGQSSLNYLFGGGEPANNVQASQK-----PNGSSQPTSSTSQPTDKKIPA 91
           L+MGRGVS+GGGQSSL YLFG GE ANNVQA Q       N   Q  S  SQP DK+IPA
Sbjct: 78  LRMGRGVSAGGGQSSLGYLFGNGETANNVQAPQNKGQTADNAPFQKPSVASQPRDKQIPA 137

Query: 92  GIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
           G+ GNLTNNY RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG G N
Sbjct: 138 GVHGNLTNNYIRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFGGGGN 186

[Close]

BLAST of Lcy09g003250 vs. ExPASy TrEMBL
Match: A0A067JWW4 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19962 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.0e-32
Identity = 78/102 (76.47%), Postives = 84/102 (82.35%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLT 93
           MGRGVS+GGGQSSL YLFG GE ANN +A++ P  SSQ     SQP DK+IPAGI GNLT
Sbjct: 1   MGRGVSAGGGQSSLGYLFGNGESANNDKAAKSP--SSQKPIVGSQPIDKQIPAGIHGNLT 60

Query: 94  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
           NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG   N
Sbjct: 61  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFGGNGN 100

[Close]

BLAST of Lcy09g003250 vs. NCBI nr
Match: KAG6602534.1 (putative methylesterase 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 203.4 bits (516), Expect = 1.3e-48
Identity = 103/132 (78.03%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 4   IMHRNEEFILCGSQFAKYMVNDIGETKGLKMGRGVSSGGGQSSLNYLFGGGEPANNVQAS 63
           + HR   ++     F+ +  +  GETKGLKMGRGVSSGGGQSSL YLFGGGEPANNVQAS
Sbjct: 361 VFHRLPPYLFLSIPFS-FTEHFGGETKGLKMGRGVSSGGGQSSLGYLFGGGEPANNVQAS 420

Query: 64  QKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGG 123
           +KPNGSSQPTSSTSQP DK IPAGIPGN TNNY+RADGQNCGNFITDRPSTKVHAAPGGG
Sbjct: 421 KKPNGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGG 480

Query: 124 SSLDFLFGSGRN 136
           SSLDFLFG+G++
Sbjct: 481 SSLDFLFGNGKS 491

[Close]

BLAST of Lcy09g003250 vs. NCBI nr
Match: XP_022954496.1 (protein SPIRAL1-like 3 [Cucurbita moschata] >XP_022954504.1 protein SPIRAL1-like 3 [Cucurbita moschata] >XP_022954513.1 protein SPIRAL1-like 3 [Cucurbita moschata] >XP_022990950.1 protein SPIRAL1-like 3 [Cucurbita maxima] >XP_022990951.1 protein SPIRAL1-like 3 [Cucurbita maxima] >XP_022990952.1 protein SPIRAL1-like 3 [Cucurbita maxima] >XP_023538178.1 protein SPIRAL1-like 3 [Cucurbita pepo subsp. pepo] >XP_023538185.1 protein SPIRAL1-like 3 [Cucurbita pepo subsp. pepo] >XP_023538193.1 protein SPIRAL1-like 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.3 bits (477), Expect = 4.2e-44
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLT 93
           MGRGVSSGGGQSSL YLFGGGEPANNVQAS+KPNGSSQPTSSTSQP DK IPAGIPGN T
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 94  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
           NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG+G++
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Lcy09g003250 vs. NCBI nr
Match: KAG7033210.1 (Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 185.3 bits (469), Expect = 3.6e-43
Identity = 92/102 (90.20%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLT 93
           MGRGVSSGGGQSSL YLFGGGEPANNVQAS+K NGSSQPTSSTSQP DK IPAGIPGN T
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 94  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
           NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG+G++
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Lcy09g003250 vs. NCBI nr
Match: XP_022134514.1 (protein SPIRAL1-like 3 [Momordica charantia] >XP_022134516.1 protein SPIRAL1-like 3 [Momordica charantia])

HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42
Identity = 94/106 (88.68%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKI----PAGIP 93
           MGRGVSSGGGQSSL YLFGGGEPANNVQASQKPNGSSQPTSST+Q TDK I    PAGIP
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIP 60

Query: 94  GNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
            N TNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG+GR+
Sbjct: 61  ANCTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 106

[Close]

BLAST of Lcy09g003250 vs. NCBI nr
Match: XP_038889735.1 (protein SPIRAL1-like 1 [Benincasa hispida])

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-37
Identity = 85/102 (83.33%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLT 93
           M RGVSSGGGQSSL YLFG GEPAN+VQ SQK  GSSQ  +STS  TDK+ PAGIPG+LT
Sbjct: 1   MSRGVSSGGGQSSLGYLFGNGEPANDVQPSQKSYGSSQLVASTSPLTDKQTPAGIPGHLT 60

Query: 94  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
           NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG+GR+
Sbjct: 61  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 102

[Close]

BLAST of Lcy09g003250 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 )

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-26
Identity = 66/110 (60.00%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGE-PANNVQASQKPNGSSQPTSSTSQP---------TDKK 93
           MGRGVS GGGQSSL YLFG GE P   +  +  P+  + P S+   P           K+
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQ 60

Query: 94  IPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG 134
           IPAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGGSSLD+LFG G
Sbjct: 61  IPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGG 110

[Close]

BLAST of Lcy09g003250 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 )

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-26
Identity = 63/110 (57.27%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGE-----PANNVQASQKPNGSSQPT---SSTSQPTDKKIP 93
           MGRGVS+GGGQSSL YLFG GE       N   A  + +  + PT   ++ +  + K++P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 94  AGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
           AG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G N
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

[Close]

BLAST of Lcy09g003250 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 )

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-26
Identity = 63/110 (57.27%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGE-----PANNVQASQKPNGSSQPT---SSTSQPTDKKIP 93
           MGRGVS+GGGQSSL YLFG GE       N   A  + +  + PT   ++ +  + K++P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 94  AGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGRN 136
           AG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G N
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

[Close]

BLAST of Lcy09g003250 vs. TAIR 10
Match: AT2G03680.1 (spiral1 )

HSP 1 Score: 102.8 bits (255), Expect = 2.2e-22
Identity = 66/120 (55.00%), Postives = 79/120 (65.83%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKP------NGSSQP----------TSSTS 93
           MGRG S GGGQSSL+YLFGG  PA     + +P      NG + P          T++TS
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60

Query: 94  -QPTD--KKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGR 135
            +P +  K+IPAGI     NNY RA+GQN GNF+TDRPSTKVHAAPGGGSSLD+LF  G+
Sbjct: 61  VEPAELNKQIPAGIK-TPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTGGK 119

[Close]

BLAST of Lcy09g003250 vs. TAIR 10
Match: AT2G03680.2 (spiral1 )

HSP 1 Score: 102.8 bits (255), Expect = 2.2e-22
Identity = 66/120 (55.00%), Postives = 79/120 (65.83%), Query Frame = 0


Query: 34  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKP------NGSSQP----------TSSTS 93
           MGRG S GGGQSSL+YLFGG  PA     + +P      NG + P          T++TS
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60

Query: 94  -QPTD--KKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSGR 135
            +P +  K+IPAGI     NNY RA+GQN GNF+TDRPSTKVHAAPGGGSSLD+LF  G+
Sbjct: 61  VEPAELNKQIPAGIK-TPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTGGK 119

The following BLAST results are available for this feature:

BLAST of Lcy09g003250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QQ99	8.3e-27	62.75	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 ...	[more]
B3H4F1	2.7e-25	60.00	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1	[more]
Q9LE54	4.5e-25	57.27	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1	[more]
Q2R0W8	5.0e-24	57.27	Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 ...	[more]
Q9LF22	3.0e-21	50.83	Protein SPIRAL1-like 4 OS=Arabidopsis thaliana OX=3702 GN=SP1L4 PE=2 SV=1	[more]

BLAST of Lcy09g003250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRI1	2.0e-44	91.18	protein SPIRAL1-like 3 OS=Cucurbita maxima OX=3661 GN=LOC111487687 PE=3 SV=1	[more]
A0A6J1GRA9	2.0e-44	91.18	protein SPIRAL1-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111456744 PE=3 SV=1	[more]
A0A6J1BYY1	5.0e-43	88.68	protein SPIRAL1-like 3 OS=Momordica charantia OX=3673 GN=LOC111006740 PE=3 SV=1	[more]
A0A5C7HMB5	4.7e-33	73.39	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015768 PE=3 SV=1	[more]
A0A067JWW4	3.0e-32	76.47	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19962 PE=3 SV=1	[more]

BLAST of Lcy09g003250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602534.1	1.3e-48	78.03	putative methylesterase 11, chloroplastic, partial [Cucurbita argyrosperma subsp...	[more]
XP_022954496.1	4.2e-44	91.18	protein SPIRAL1-like 3 [Cucurbita moschata] >XP_022954504.1 protein SPIRAL1-like...	[more]
KAG7033210.1	3.6e-43	90.20	Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022134514.1	1.0e-42	88.68	protein SPIRAL1-like 3 [Momordica charantia] >XP_022134516.1 protein SPIRAL1-lik...	[more]
XP_038889735.1	1.3e-37	83.33	protein SPIRAL1-like 1 [Benincasa hispida]	[more]

BLAST of Lcy09g003250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26355.1	1.9e-26	60.00	SPIRAL1-like1	[more]
AT1G69230.1	3.2e-26	57.27	SPIRAL1-like2	[more]
AT1G69230.2	3.2e-26	57.27	SPIRAL1-like2	[more]
AT2G03680.1	2.2e-22	55.00	spiral1	[more]
AT2G03680.2	2.2e-22	55.00	spiral1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..92
None	No IPR available	PANTHER	PTHR33403:SF28	PROTEIN SPIRAL1-LIKE 2	coord: 21..133
IPR039613	Protein SPIRAL1-like	PANTHER	PTHR33403	SPR1	coord: 21..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g003250.1	Lcy09g003250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
cellular_component	GO:0010005	cortical microtubule, transverse to long axis