Lcy09g003050 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g003050
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DNA-directed RNA polymerase
Location	Chr09: 2592573 .. 2607286 (-)
RNA-Seq Expression	Lcy09g003050
Synteny	Lcy09g003050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTAAGGCGGCTACTTCTCCAACTCCCTCTATGAATGAATTCTTACTGCTTCTGCAAATTTTCTTGTCTACTGAATTTCTCTAATCAAATCCCCTTCTCAATTGCACCAAATCATGTGCATACCTTTCCACTGGAACTATTTCGTATAATTTAATGTCCTTTTGCCAGTGTTCTCTCAGTCTCACCAGCAAAATTGATCATTCTCTTCTGTTGCAAAAGCCCACAAATTCTCACCAAAACCCTTCGATGATATCTACGTGGAAAACCATTGCCAAGCAAGCTATTTCTAGGAACCGGAAGTTTCATCTTGATTGGTATTGCTTTTCCCGTTCCGTTCTGGGTCATCCCCACGAGGCTTTGTTTCGCGAGAAATTGATATCTGGTAATTTTGTTCTTAGTTCACTTCCGAAGTTCGGGATTTTGGAAATGGGTATTGGTCGAAATGAAATTTCGTCCCAGGAAGATTATGGAAGCAGATTCTGTTTTGGGTCTTTGGGAGCTCGGATTGGGTTAAATGGGTCGTGCCCAAAAGGTTATTCTAGTGTTGCTGAGGCGGTTTCGTCAACAGATGTGGACGAAGATGCATCTGTTGACGATGAAATCCAAGAGTTATTGCAAGAGATGAGCAAAGAAGAGAAGAGGCAGGTTGAGTATAGGAGGAGGAGGCTGAAAATGGCGAAGGGAATGGGACAAGGGAAGTATCAAATGCTGAAGAGGAGGCAGGTGGCCATAGAGACCGAGGCGTGGGAACAGGCAGTCAAGGAATACAAGGAGCTATTGATGGATATGTGTAAGCAGAAGTTAGCACCTAATCTGCCGTACATGAAGTCCTTGTTCCTTGGCTGGTTCGAGCCCTTGCATGATGCTATAAGTAAAGAGCAAGAATTGATACGGGAAGGGAAAAACAGGACTGCATATGCTCCTTATTTTGATCAATTACCTGCTGATATGATGTCTGTAATCACGATGCATAAGTTGATGGGGTTGTTGATGATGGGACATGAGCACGGTAATGCCAGGGTTGTGCAGGCTGCTTGTGTAATAGGAGATGCTATCGAACAAGAGGTACATCGATTTTGTATATGTGCTCTGCGAGGTCTCTAGAGAGTTTATGCACTTTCTAGTTTGTCTGTTAAGATCATTGGAAGTGACTCAAAGATAGATATAGTTTAGAAAATAATTAAACTAAACTAAGAACGACACCTTCTCCATTTAATTGAATGAGAGTTAGGAGAAAAGGTGATCTTTCCTGTGTCTTTCTGTATTAGTTGAGTTGCAATACTAAAAAGATGTCCAAATAGGTGCCTATGCCCTGGTGGTGTATCTGTACGAAGAAAATAAGGAAAAAGAACATTTGAAGATCTCGATCACCTCTTCTCTTTTCATTTTTGCATTCTTGCTCCAAAACTAAAGGGAAAGCTTGGGGATATTTTTCAACTATTAGAGTGCAGCCCACAGAATTTTGTTTTGAAAAGAATGTTGTGAATTTTGTTTTGTATAGTCTTTGTGGCAACTGATAAAAAGAGAAAGGCAAAGATTCTTTGGGTCAATTTTTTTGCTTAAAAAGAAGAAAAGAAAACAGAGCAAAGATCTGCATTTTCTCTACATAGTACGCCTAACAATTCTTTTTGTTATTATTTGCACAATTACACATGGTACCGATTGGAAGTCCTTTTTTGGAAATAACTTTCTTGGTTTGGTTGATGTTTTCCTCCCCTTTATCTTGTGTGTTTATTTCGTTTATGTTTTTATTTATAAAAGAAGGTTTCTTTTCCCCTTTGTTTCTAACCTTATTTGGCAGTACTACATGTTTATCAATCGTTAATGTGGTTGCATGACACGAGCGGTTAAAATGATCTTATTTTGGTTCATGTACAAGACATTGTTGGTTGCATATTTAATTGTTACCTTTTAAAGTTGAAGTTATTATTTGCAGGAACTAAAAAAAAAGTTATTATTTGCAGATTTTCATCTTTTTGTATCATAGCTTAAGCTACATTAATTGCAGCAGTATTTCTTGGGACGTTTTTCTTGCCTAGGGCAATCTGAGAATTTTGACTTCTAACACTGATTCTTGACATGACTCTTATTCCCCGTTGGGTTGTAAGTTTGTAACTATAGTGTTACTTAATCATGTCAGGTTAGAATTCACAAATTCTTGGAGAAAATGAAAAAGAAAAGGCACAACAAAGATAATGAGAATGATGAAAAGCCCGATTCTCAAATCAAGGAACAAGAGAGGTTAAGGAAAAAAGTCACTAACTTGATTAAAAAACAAAAGCTTCCGGCTGTAAGACAGATAGTGAAGGGAGCGGATGATTCAAAACCATGGGGCCAGGATGCCAAAGCAAAGGTCTGGGTCATCTTTTCTATATTCAGTAGAAGAATAATGGTTGCATGTTCCTTTTTCACAAGCTTGCTAAAATACTTTGTGTTTTTAGGTTGGGAGCCGTCTAATTGAGTTGTTGACACAAACAGCTTACATACAACCTCCTGCTGATCAGTTGGCTGATGGTCCACCTGATATTCGTCCTGCATTTCGTCACTCATTTAGAACTGTGATGAAACAAGCAATGTAAGTCATTTATTTATTGTCATTGGTTTCTTCTCTTTGTACTTTTTAATCCTCTGATATATATGGAATTGTTTCTCATGATATGTTTTGTTTGCTTGAACTTATTATCTTGACACTTCTATCAGTAAGAATTCCAGCAGGAGATGTGGTGTCATCGAATGTGATCCTTTAGTCATCAAAGGCTTAGAGAGGACTGTAAGTTACGCTGTCTATTTTGTTATTGGAAAATTTGCTTGTGTCCCATTCTTCTGCATTTCATTTTTAAACATCACTAATGCCAACTTCACATTTCTTTTTTCAGTTTTCTGTACTTGTTTGTTTGGTAGAAATAGTTTCATGATGTGATTGCAGTTGGAAAGCATTAGTTAGTGTGCCGAGTTCTTTGTCAGTTATTGTTATCCTTGGAGTTTTTCTTGCATTATGAACATGTCATGGAATTTCTTGCTGCATCTTTCCTTACTATATGTTAGATGATTGATGAGTTGTTTTTCTCAAACAGGCAAGACACATGGTGATTCCCTATATGCCAATGTTGGTTCCCCCAGTCAATTGGACAGGGTATGTTATTTCACTTTGCATTTGTCTGCAATCTGTCTTTCATGTAACTTCCTTGTTAAGATCAATTTCCTATGAGAATTAATACTCTAGAACAGAAGTCTGATAGCTAGGCATCTTGATTGAGATCTTGAAGTGGGTTGAATTATGGAAGTAGTATTTCAATTTCCTATGAGAATTAATACTCTTGAACCAACGTACCACATCTAGGCATCTTGATTGAGCTCTTTTAAGTGGTGGAGTTATGGAAGTAATATTATAATGATTTGTGAAAAGCCAAAATGAGTGGGACGTCTACTGAAGTGCCAAAGGAGATTACAAAAATTATTACAATTGGTGTAACTCAAAAAAGAAGCTTAAGGAAGAAAAAAAAACCTTGAAATGAGTGGTCAATAAGGGCCGTGAGAAAAATAAACGACTTAAAGGGAATGAGTTCAATGGCAAGTCTACTAGTTTAGTCATTTTTTGTGAAAATGTACAGAGTACAGCTTCGTGGTGGATATCGTTATACAGGAATTCTTTTTGTAATTATAGTCTGTCTATGATTATTAACGATTGACAGGCTCTCCAGATGTAGTGTCTTGGTTAGTTCTTTTGGGAGGGGGTTCTCTCTACCCCTAGCCCCTAGGCTGTTTGGTTCCATTGGTTGATCAATATACAGTCCTTCTTGTCTCTTTTTAAAAAAAAAAAAAGGAATGAGTTCAATCCATAATGGCCACCTACTTAGGATTTAATACCCTACGTGTTTTCTAGCAACCAATGTAGTAGGGTCAGTCGTTTGTTCCGTGAGGTTAGTCGAGGTGTGCGCAAGCTGGCCCAAACACTCACAGATATCAACAAAAAAAAAAAAAGCGCCTTGAAATGAGTAGATCAAGAACACAAGAAAATATCCCTCGACTCTAACCAATCTGTAGGAGATATTTAGCTCACAATTTTAATAATTTTTAGTTTATGTCCCATAAAAAATGGGATTTATGAAGCCTAGGTTTGTGTAATATGTATTTAGATTGTGCAAAAACAATAAGTTATAAAAATCTAAGCTTGTGTAACTTGTATTTGGTTTATAAGTTTATGATGAGTAAAAAATAACCTCATAGTTTAATGGGTTTTTATAAACCTAGGATCATTTTTTGAACACTTAACTTACCTCGCTCTATTGGTGTAAATTCTTCCCATACCTACATATATATATATATATATATATATATATATATATATATATATTTTAGAGAAACAAAATTTTATTGATTAATGAAATAGGTGAAAAACCCAACATCTATAGGTGGATTACATAACAATTTTTCAATTAGAAATCAATGAAGAAAGACTATAAAAAGCAAAGGGGTGTTACATTTACACCAATACAACGCATGGAATGGAACCTCATAAAAAAACAGATTTAAAGAATGAGAAAACATCCTAAAAAATTCTTCCATTTCTTTCGCTCCACAAAAACCAGGAGAAAACTCTATTAAAAGCAAGCCATAAAATCTTCTTTGCTCCATGGAAAGGATGACCCACAAAAATAGTTGCCAGAAGATCATGAATGTTAACAAACATCGGTAGATACCAACCAAAAGCATCAACAATCGAGGTCCAATATCTGGAGGCAAAGGAACAGGTGACGAAAAGATGGCCCTAATTCTCCATGTTTGATGAGCACATAACACACCACTAGGGGTTTTCAAAGTTGGACCGAAAATCGACTCGACCGACCGAAACAAGTTGGTTCTGTCGGTTTTTCTTTATATTCGGCCGAAGTCGATTTTTTCAATGAAAAAACTGACGGTCGGTCGGTCGGTTCATACATTGGCAGTGCACACCGATCGACCAACCGACTTTATCTCAATATAAAAAAAAAATTTAAAAACCAGCGTCTGCTTTCATTGGCACACTGCAAATTGCACATTGTGCAATGTGTTGTCTTTTCTACTAAAAAAGTCATGATTACTTTTTCAAAATATTAATATTGTTTGTTTTTCTCTCTCTCAATTCTCTTTTTCCTTTTCTTCTTCTCTTTTCAATATCTTTCTTCTAACCCTATCACGATTTCATGGGTTATTCTTTCTCTGTTTCTCTTTCTTCTCTTTTCCCCTCTCTCTCTTCTCCCTTCATCTTCTTCACAGATTTTTTTTTTTCCTTTCTCTTCTTCTCTCCTTCTTCATTTCTCTTCTCCTAACCTCTTCTTTCACTGATTTCATCTTCTTTTCTCTCTTTCTTCTTTCTCTTCTTCATAGATCGTTTTTTTATCTTTTCTTTCCCTCTCACACTTTTCTCCTTCATTGAACTCACCAAGCTTCATGTTTTCTCTTCTTTTCTCATTTGGCTTCAAAACTGGCCAAACCGACTGACCGAACGACTACTCAATTGGTCGGTTTTATGAAACATCCTAAAATCGGAGACCACCAACTGACCCAAATCGATAGGTCAGTTTTCGACGTCAGTTTTAGCCCAAAACCGACACCGACCGACCAATGAACAACCCTACACCACGATGGCGAAAGGTGAAAGTGAGGCATTCTTCGTTGAAGATGATTCGTCGTATTAATAGCCCCATGACTAAGCTCCCACAGGAAGATTTTTATCTTTTAGGATAACTATCTTTCCATATCATCGAATACAGGTTATTCGAAGTAGTATCAGGAACACCCAGAAGGTCGGCCATCAGGAATTTGACAGAGAACCACTTGGATGGTTCAAGAGGCCAGGACCAATAGTCATTCATTTCCTTTAATCTAATAGGAGACAGGAGATGCGAAAGATTTTCCCATTCATTTGTTTCAAACTCATTAAGATGACATTGAGGGCTGAGATTCCATGCTGATTGGCGATTGTGATGACTTCCAAACTTCTGCAACCATAGCATTTGGATTGGTGGTTAAACAATAAAGGCATGGGAAAAATGTTGCAAGTATCCCACCATTCAGCCAAGAGTCATTCCAAAATGATGTGTTTCGCCATTTACCAATAATTTGATGGACATGATTGGCAACCATATCTATAGTAGTACAAATAAAGCGCCAAGGAGATTTGAAGGATTCCCTTTGGATGCGAGGAGGCCAAAGACAAGCACCCTCCGAATCATAATATTTAGTAACAATAAGATTATGCCAGAGTGATCCTTCCTCATGCAAAAACCTCAAATCCATTTGGCTAATAGGGTCGTATTCCCATACCTTCATGATTGTAGTCTTACATCTCTCATAGCTCAATGGATTTTTATTTTTTATTTTAATCCTTTGGCTGGTTTGCCTTCTTTTGTAATTTCATCTCACCAATGAAATGAAGGAATTCATGTTTCTCATTAAAAAAAAAAAACTAAAAAAAACTCATTCTCTTCTTAAGCATATTTCATGTATTGTATAATTATAAATGGATTATGCATATATGTCCATAATTTTTTTATATTATTATTTCTGAAGGATTGGTATTCTGCCGACCAATAAATAAGATTGAGTTTTTCAAGGCTAATATCTCTAGATTCAAATCTCTCTGGCAAATTTTGACAATGAGCATTTGCACCTGCATTTTTTCCTGTTCTGGACATGGCATTTTCGTTTTCAGTATGAGTTTGTTTTCCTCCTGTCACAGCTATGACAAAGGAGGACACATCTTTTTACCATCTTTTGTCATGCGTACTCATGGAGCCAAACAACAACGTGATGCAGTTAAGAGGACCCCAAAGCAACAACTAACTCCAGTTTTTGAGGTTTGAGATATTTAAATATTGTAATTTCATTATATATACACACACACATATACATATCTATCTATCTATCTATCTATCTATATATCTATATATATATATATACACACACACACACATATACATATCTATATACATATTTGTTCACCACTATTTGAATAACTTGGCTAGAAGGAAGCTTGTCAAGGCTTTATATTTTGTGTAAACTTAGTCATGTTAGTGCTTTTCCGTCTTTCCTAGGCCCTAGACACTCTTGGAAATACCAAATGGAGAATAAATAAAAAGATACTCAGTGTTGTGGATAGAATATGGACAAGTGGAGGCCGTCTTGCAGATCTAGTGGATCAGGATGATGTGAGTGGCTTGATGCCAATCATTTTTCTAATAACTACTTTTTGATGCAAATTATAGTTTGTTCTTTTCCTTTCCAGATTCCACTGCCAGAAAAACCTGATTCTGAGGATGAAACACTGCTAAGAAAGTGGAAGTGGAAAGTCAAATCCGTCAAGAAAGAAAATATGGAGAGGCATTCACAACGTTGTGACATAGAGCTTAAACTTGCTGTATGGTCTCACTTGTTGTAACAATGATATCATATCTTTTTAATTTTTTGAAATAGAAATTCATTGTATTTCTATGCCCACTTCATTTAAATCTTTTGATGGTGGAACAGGTAGCACGGAAAATGAAGGATGAGGAAGGTTTTTACTATCCACATAACCTAGATTTTCGTGGCCGTGCTTATCCTATGCATCCGTACTTGAATCATCTTGGTTCAGATCTTTGCCGAGGTATATTGGAGTTTGCAGAAGGTCGCCCTCTTAGGAAGTCTGGCCTACGTTGGCTGAAGATTCACTTGGCAAATCTTTTTGCTGGGGGTGTGGATAAATTATCTCATGATGGGCGAATGGCATTTATTGAGAATCATTTAGAAGATATATTTGATTCTGCTGACAGACCACTCGAAGGAAGACGCTGGTGGTTGAATGCAGAGGATCCGTTTCAGTTTTTAGCTGCATGCATGAATCTTACTGAAGCTTTGAGAAGTTCTTCTCCGGAAACATTTATTTCACATATTCCAATCCACCAGGTATTCACGTATTGGCTTCCCCTTTAACAAAGAGGGAAAAAGACCCCCTCTACCAGGGAGTTTACATTATTGCTACAATTGGTATTATTGTGAAAATAATTTCAATCAGGGAAAAAAGCTAGAGTGAATAGACTAATAGGAGCTCAATAAGTGTACTTTTCCCGTTTCTCCATTCAATCTCTTGAACTTTCTTAAAAGTTTTGAGTTTTTCTCTTAAAAATTGTTGTCACTATAAACCTGGCATCATGTTTCTGAATTCCGTACATGAGGCTAAAGCAACTCTATTAAGTTCATTAGAGTCTTTGAAGGAAACTGTTTTTTACTCTACCTATACTTAAATTCCTCCTTGTGTGTGGATGGTCAGCATGTGATATGCTTTAACCGTTAGAGATATTCTTTGTAATTTTTCTGTCCACCTAACCCGCTCTTGGGTAATCTTGTCTTTCTTTCTTCACTACAGTTAATTCATTAGAGATATTCTTTGTAATTTAGTATTTCCTTTGTGATTGTGGGTTATACTTGGGTTGGTTTTCTTGATCCCCCTTGCATGATTTTTTATTTATTTTTGAAGTTAAATGAAAGGAGTTTCTTGTTTCTCTTAATATTCCAGTGGTCCTTACTCTTTCTTTTTAATTTGTGATTCTCTCTAGGATGGCTCTTGCAATGGATTACAACACTATGCTGCTCTTGGACGAGACAAGGTAGTTAATATTTTAGCATCGATTTGTTTCATAGCGTGTAGGCAACTAATACTTCTTGTGATGTCATCACGTTAGGGGAAAAAAACTGGCTGAAATACCAACCTGTCTGAACACCTTTGCAAATTTCTAGGATTGTAAATTTGACTGGATTTTTTGTTTGTTTGTTTCTAGCTTTAACTTTTAAATTATTCTGTTATTTAGGATTTCTAAATGAAATGCAATCCATGTTTATCAGGTTACGAAACAATATCTATAAAGCTTTTGGACATCAATATCAAAATGGTTCCTTTCTTGGATTTTTAGGCCCTCTGTAACTGCTTCAGACACATATTCTCACTGTCCTAATGGACGCCTTCTTTTCCCTTCATAGGTGTATTAATTTTACGAATTGCTAGGCTAATAGAAAGGTCATTGAACCCTTTTTTCCAATTTAATAATACTTTATGTTTGTGTCATAGATGTATTTATTTTATAATATGTTTTTATGGTGGCTAGGCAGTTTCGTTAGATAGTAAGTCTATTATCTAAACCAATTTTATTGATTTACTTAATACCTATTAAACAGAATTAAATAAAGCAATTCTTCCTTTGGAATTGACACATAGAGCAATTAGTACTAAATACAATTTACGGAGACGCATCACGCATGCCTACTTTGGCCCTATCCCCAAGTTGGTGTTCTTTATGTAAAGCGATGAAGCTCTGGATCACTTATTCATCCCTTGTCCTTATGCTTGGGGATTCTGGACAAAAATCCTTATTGCCTTTGGGTGGAATTTGGCCTTCATAGGGGACATCAAAAGCACACTTCATTCCATCTTGCTGCTTTTAAGGATTTAAAAGTAGTTTTATGGATGCACATTGCTAGAGCATTTTTCTAGGAAAGAAATCATAGGGTTTTCATGGACAAAGAGCTTCCCATTATAGAGCTGTTCGACATTGTCATTTTCAATGCTATTTCTTGGTGTAAATCTTCTAGTAACTTTGCATCATACTCATATGTTTCCCTTTTAACCAATTGGAAAAGCCTTTTGTAATCATCATGGATTATTCATCCTTTTTGTCAATTTCATACATCAATGAAATTATTTCTTATAAAAAAAAAAAAAGGAATTAAATAAAGAAGTAAAAAGAAAAAACCCTAACTTGAGTGCAACTTGTGAGGAGAATACAGAAGGCTTAGGAAAAAATGAGGAAGATGGGAGTAAATACAGGGATGGAAGGAGGGAGGGAGAGGGGAGGGGGTTGAAGAAGTTGAAGAGGGAGTTGGTAATTGGTATAGAAAAAGAGCCAAAAGTCCTATGACTTAACGGCATTTGAGCTATGCTATGGGTGGTGTGGTTAGAGTGAAGTAGAAGAGTCTTTTTTGGAGAAGTGGGAGGAGTTGTCTAGGAGAATTGTGTTTTTGTTAGTTCCTCTTGGAGTGCCACAAGGCTTCAAGTAAATCGCACCGTTTGTGCTAGTTGGAGAATGTATCTGTAACTCCTTTGGCTTTTGAAGGTTCTCGGTTTTAAATTTTTTTTTTAAAGTAAAATTTTAATCATCCTTGTGAGACTGTATCCTACTTGTTAAGGTTTATATGCAATTATGCATTATACTATCATTTGTCGCTGTTAACTTTTCATTTTAATTCACTATAGTACAGTTGGATAAGAGTACAAGATATCCTAAAGAACAAAAACGAACAAACAAACAAACATGAGCATCAACTATTAAAGAAAATACCAAAAGAGGTCATCCTATTGAAGACCCTTTCGCATTTCTGCCCCGCTGTAAATTGAAGACATCCAATGTAATTTGTTTAGATCCTCTATTTTTTTCCCCCGTTATGCAAAATTTGTTGAATTTTCCAGTGTGTTATTTTTATTTTATTTTGCTAGAGCTAAAGAACCAAACTGAAAGTAGCTTAGCATAATTCCATTGGACATTCTGATTAAAAGAAATCCAATGGTTTCTTTGTACTTCTTACTTCTAATTCCTTGAAAATCATCTAGCTTTGCCCTGTCTGCCAGTGGCTTGGGATCTTATCTTATTGAAAGTTTTTGGTTCAGTTAGGAGCAGCTGCTGTCAATCTGGTTGTGAGAGAGAAGCCTGCAGATGTTTACTCGGGGATAGCTGCTAGGTATGGTACATTAACTTGGAGATAAAATTTTCATGCAAAGAGAGTGATTTTATTGCTCATAGTTGCATTAGTAAAATTTCTGTTGGGGTGCACATAATTCTTGTTCCCCTCAGTCTTTTAATATAAATGAGAGGGTTTAGTTTTATTGTTAAAATTTATTCTCTTTCTGACCAACCAATGTATTTTGTATATACTTGATAAATTATATAAAACCAAATAGAAGTTTGTTGTAAAGAGCCTACTTATTAAAGGATGTTGATTTATTATCATTGTTCTGGGTTGCCTTCCTAGGAATTGTTTATCCTCTAATCTTTCCGTGGTTGCTGAGTAAATAGAGAATTCTTTTGAGTGGGGTATGCTTTTGGTTGTCTCACATGGTGAGTTTGTGTGACTAAGTACCTAAGTTGTCTGCTCTGGAGGATTTACACAGTGAAAATTGGTGTCTAAGAATACCTGTCCATTGAGGATATGGCTTTTGAGATTTTTGGTAATTTGGGCTTGGGTAGTATTACAACTTCAAATTATGTCTTAGCTTTGAGGCATGAGAACTTCTGTTGGGAACATCTTCAATCTTCATGCTACACTGTATTATTGCTAGTAATTATGATGACCTTAATCACTTCGAGGTGGAATATTGTTGAGGCAGTATTTGAAGCCAGTGGACTTCCATGTTTACATCATATGCCTATTTTCAGTCTCTAATCTCTATCAATATTAGGAATCAAGTTTAAACAAAATTCTGAGGGGATAGATGGATTTTCAAGTCTATTGGTGTTCATATTTTCTTGAACTCGTTCCACTTTGCTAGCCCGTCAATATTTAGTTGGTGCTATAGTTTTTTTTTTTTTTTTTTTAATAGTTAGGAGGAAATATTGGAATTTTATTGATGAATGAAATGTACAAAAGGGGAGAAAAAAAGATCTCCAACTCGTATTTGGTGAAAACTCTTAAACGTGGAACTTGATCCTTTTAAGGAATTTTGATGATTTATAAACAACAAAATAGATAGTTATGTTTGAGTTCTTAGAGGGTTTCTTACTTCACGTTAAGGGAGCTTTACAGATCTTTTTTCTTTTTCATTTTCTAAAACAAGATCCTCATGTGCTTGAACCTAGTATTACTTGGCTTCACAGAGAGGCAACCTATAGTTTGATGTTTGTAAAAGCAATCTGCAGTTTGTCAGGGACTCAATCTGATTTTAGAAATTGGGATGTTAGGATCCTGATATCCTTTCATTCCCCTTTCTAGTGGTTGAACGAAGGCATTCAATTAATAGCACCATGGATTTTTTTTATTTTTTATTTATTTTTTATTTTTTTTAATCATTTTTGGGAAACCTACATCACGGAAGTTATATATAAATATATTTTTATGTATTTATTGATTGTTGCAGGGTTCTAGAAATCATGCGGAGGGATGCACAAAAAGATCCAGCAACTTTTCCAGATGCATTGCGTGCAAAAACATTAATAGATCAGGTTGTCAGCCTACTCGAGATCTCTAAACTTTAAGCTTTGCATTACAAAGCAAAATGGGAAAATATAATTTTTCTGATGCAATCACTAAATATTTTGCAACCAGAAAAAACTCGTATTAGGTAGATTAACTTTTGTTTATACTTGCATTTGATCGTTTGCTTATCCTTGTTGCTAAAACTCTTATAGGTGGATAGAAAATTGGTGAAGCAGACAGTGATGACATCGGTTTATGGTGTCACCTATATTGGTGCTCGTGATCAGATCAAAAGGAGGCTGAAGGAACGTGCTGCCATATCTGATGATTCAGAGCTCTTTGGCTGTTCTTGCTATGCTGCCAAGGTAGTGGGGCGGGGTCCGTCCATCTTCATTTTGGGAACTTCTATGAATTAAATGATTGAATGAGTGGTCAAATATTTAATAATATTCAGTAACATTATGTGTGAGCAGACCACGTTGACGGCACTAGGGGAAATGTTTGAAGCAGCCCGTGGGATCATGAGTTGGCTTGGAGATTGTGCAAAAGTAAGTTCTCTTTCTCAGCCTTTTCCTTTAATCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTAAAAAAAACGTTGTGAACTCCCCCTTTGCTATGTATTGGAAATAATATGAAGTTTGTATTCAAATAGATTATTGCCTCTGAGAATCAACCTGTGCGATGGACTACACCCCTTGGACTACCTGTTGTGCAACCATATCGCAAGTTGGGAAGGCATCTTGTGAGTGTTGAAGATTTTACATAATCAGTAAAAGTGACCAATTTTCTTCTGGTAGTATAGAAGGGATATTCTAAAGGCATTAACTGACTTATGATTGGTTTCAGATCAAAACTTCTCTCCAAATATTGACACTACAACGAGAAACAGACAAGGTAACATTATACCTTCACTTGGAACTTCTCATATTATCAATGAAAGTTTTTTTTTTTTTCTTTCTTTCTTGTAAAAAAATCGATTGGAAGAAATTTCTTTGGACATTGCAGGTGTTGGCAAAGAGGCAGCGGACAGCGTTCCCACCAAATTTTGTTCACTCCCTCGATGGTTCTCATATGATGATGACTGCAGTTGCCTGCAAAAAGGCAGGTTTGAATTTTGCAGGTTTGTATGAATTATTTTGCTCTGTTATCTCGTCTTTCACACTCTACTTAGTGCTAACTGCTATATGCCTATGTGTGATATCAGGGGTTCATGATTCATACTGGACACATGCTTGTGATGTAGATGAAATGAATAGAATACTTAGAGAGAAGTTCGTCGAACTTTATGAGACTCCAATACTAGAAAATGTACGGCTTTCCTACCTCATATTTCATTTTGAACAACATGGGAAGCAGCTTCCAGTTTGCTTAATGCATATAATCATAACATGTTTATGAATGAGTCAAGGGGGAAAAGAAGGTTTGGGTAATCTTTTATCATTTGAAATTTGTTGCCTCTAATAATGCAGTGGATAAACATCGGAATGTTTCTTGGTTTTATAAAACTGCAACCTGTAAACAGATATCTGTCGTCTGTGGTAAAGAAATATGGAATTGGTAGTTTCACTGTCTTGCTTACGATCAAGTAGTTTATGAAATTAATAGAAAATTACATCATTGTGAAGAATCTGCAATTTTTTTTTCTTTTGATGTGTTATACTTGTTGGCTTTGCAATTGATCTGACTAATTGTTTGTTTACAGTTATTGGAGGGCTTTCAGCGATCTTTTCCTACATTGGACTTTCCTCCTCTACCCGAACGTGGAGAATTCGATCTAAAGGAAGTTCTGGAGTCGCCTTACTTCTTCAACTAAGTTTATATGGGTGCATTTGTCTTCACTTTTTGCTCTCTTAACGCGTGCAACCGGGTTTTGCCTGCTAAAGTACACCTTCAAGGCTTCAACTATTACTCATCTACATTTCAAAGAGTAATAAAGGATGATGCTTACAGAGTCCCTGGTGCAGACTGGCCACTGTATTATATATACAGATGAGGTTTTCATCTCTTGAAAGGCTCTTCTCAGGTCGACTTCAAAAGAGCTCTCGACTCGAATACGCAGAAGAAAATGGTTAGGCAGACAATAATCATCAGACACAGCAATAGTAGTCATCTTCAACTAGAACTGTTGGACCAACAAAGATCTGCCAGAATTTTCCATCCGCTTCCATTCATCGGATACGGTTAAAGAAGTCGAATGGACCATACAGACCATACTCTTCCCAGAAAGAGAATTCTGATATGATCAAGATTGCTACAGTAAGTAACAAAGGATTGCTTGTACATATCTCCCCATCCTATGATTCAAATGAAATGTGAAAGTGGTGAAAAAAGGATCACCATTGCCATTTTACTTGATTCATCACAAGTTGTGCTCCAAGATTGCACCTGTCTCTTTGTGACTTGACTCATTTCAGTCTCTGCAGCTCTGATTCTTACAAATTGTTGCAGTCTGCTTTCATGTATATGTAAATGTTTGTGCA

mRNA sequence

GTTTAAGGCGGCTACTTCTCCAACTCCCTCTATGAATGAATTCTTACTGCTTCTGCAAATTTTCTTGTCTACTGAATTTCTCTAATCAAATCCCCTTCTCAATTGCACCAAATCATGTGCATACCTTTCCACTGGAACTATTTCGTATAATTTAATGTCCTTTTGCCAGTGTTCTCTCAGTCTCACCAGCAAAATTGATCATTCTCTTCTGTTGCAAAAGCCCACAAATTCTCACCAAAACCCTTCGATGATATCTACGTGGAAAACCATTGCCAAGCAAGCTATTTCTAGGAACCGGAAGTTTCATCTTGATTGGTATTGCTTTTCCCGTTCCGTTCTGGGTCATCCCCACGAGGCTTTGTTTCGCGAGAAATTGATATCTGGTAATTTTGTTCTTAGTTCACTTCCGAAGTTCGGGATTTTGGAAATGGGTATTGGTCGAAATGAAATTTCGTCCCAGGAAGATTATGGAAGCAGATTCTGTTTTGGGTCTTTGGGAGCTCGGATTGGGTTAAATGGGTCGTGCCCAAAAGGTTATTCTAGTGTTGCTGAGGCGGTTTCGTCAACAGATGTGGACGAAGATGCATCTGTTGACGATGAAATCCAAGAGTTATTGCAAGAGATGAGCAAAGAAGAGAAGAGGCAGGTTGAGTATAGGAGGAGGAGGCTGAAAATGGCGAAGGGAATGGGACAAGGGAAGTATCAAATGCTGAAGAGGAGGCAGGTGGCCATAGAGACCGAGGCGTGGGAACAGGCAGTCAAGGAATACAAGGAGCTATTGATGGATATGTGTAAGCAGAAGTTAGCACCTAATCTGCCGTACATGAAGTCCTTGTTCCTTGGCTGGTTCGAGCCCTTGCATGATGCTATAAGTAAAGAGCAAGAATTGATACGGGAAGGGAAAAACAGGACTGCATATGCTCCTTATTTTGATCAATTACCTGCTGATATGATGTCTGTAATCACGATGCATAAGTTGATGGGGTTGTTGATGATGGGACATGAGCACGGTAATGCCAGGGTTGTGCAGGCTGCTTGTGTAATAGGAGATGCTATCGAACAAGAGGTTAGAATTCACAAATTCTTGGAGAAAATGAAAAAGAAAAGGCACAACAAAGATAATGAGAATGATGAAAAGCCCGATTCTCAAATCAAGGAACAAGAGAGGTTAAGGAAAAAAGTCACTAACTTGATTAAAAAACAAAAGCTTCCGGCTGTAAGACAGATAGTGAAGGGAGCGGATGATTCAAAACCATGGGGCCAGGATGCCAAAGCAAAGGTTGGGAGCCGTCTAATTGAGTTGTTGACACAAACAGCTTACATACAACCTCCTGCTGATCAGTTGGCTGATGGTCCACCTGATATTCGTCCTGCATTTCGTCACTCATTTAGAACTGTGATGAAACAAGCAATTAAGAATTCCAGCAGGAGATGTGGTGTCATCGAATGTGATCCTTTAGTCATCAAAGGCTTAGAGAGGACTGCAAGACACATGGTGATTCCCTATATGCCAATGTTGGTTCCCCCAGTCAATTGGACAGGCTATGACAAAGGAGGACACATCTTTTTACCATCTTTTGTCATGCGTACTCATGGAGCCAAACAACAACGTGATGCAGTTAAGAGGACCCCAAAGCAACAACTAACTCCAGTTTTTGAGGCCCTAGACACTCTTGGAAATACCAAATGGAGAATAAATAAAAAGATACTCAGTGTTGTGGATAGAATATGGACAAGTGGAGGCCGTCTTGCAGATCTAGTGGATCAGGATGATATTCCACTGCCAGAAAAACCTGATTCTGAGGATGAAACACTGCTAAGAAAGTGGAAGTGGAAAGTCAAATCCGTCAAGAAAGAAAATATGGAGAGGCATTCACAACGTTGTGACATAGAGCTTAAACTTGCTGTAGCACGGAAAATGAAGGATGAGGAAGGTTTTTACTATCCACATAACCTAGATTTTCGTGGCCGTGCTTATCCTATGCATCCGTACTTGAATCATCTTGGTTCAGATCTTTGCCGAGGTATATTGGAGTTTGCAGAAGGTCGCCCTCTTAGGAAGTCTGGCCTACGTTGGCTGAAGATTCACTTGGCAAATCTTTTTGCTGGGGGTGTGGATAAATTATCTCATGATGGGCGAATGGCATTTATTGAGAATCATTTAGAAGATATATTTGATTCTGCTGACAGACCACTCGAAGGAAGACGCTGGTGGTTGAATGCAGAGGATCCGTTTCAGTTTTTAGCTGCATGCATGAATCTTACTGAAGCTTTGAGAAGTTCTTCTCCGGAAACATTTATTTCACATATTCCAATCCACCAGGATGGCTCTTGCAATGGATTACAACACTATGCTGCTCTTGGACGAGACAAGTTAGGAGCAGCTGCTGTCAATCTGGTTGTGAGAGAGAAGCCTGCAGATGTTTACTCGGGGATAGCTGCTAGGGTTCTAGAAATCATGCGGAGGGATGCACAAAAAGATCCAGCAACTTTTCCAGATGCATTGCGTGCAAAAACATTAATAGATCAGGTGGATAGAAAATTGGTGAAGCAGACAGTGATGACATCGGTTTATGGTGTCACCTATATTGGTGCTCGTGATCAGATCAAAAGGAGGCTGAAGGAACGTGCTGCCATATCTGATGATTCAGAGCTCTTTGGCTGTTCTTGCTATGCTGCCAAGACCACGTTGACGGCACTAGGGGAAATGTTTGAAGCAGCCCGTGGGATCATGAGTTGGCTTGGAGATTGTGCAAAAATTATTGCCTCTGAGAATCAACCTGTGCGATGGACTACACCCCTTGGACTACCTGTTGTGCAACCATATCGCAAGTTGGGAAGGCATCTTATCAAAACTTCTCTCCAAATATTGACACTACAACGAGAAACAGACAAGGTGTTGGCAAAGAGGCAGCGGACAGCGTTCCCACCAAATTTTGTTCACTCCCTCGATGGTTCTCATATGATGATGACTGCAGTTGCCTGCAAAAAGGCAGGTTTGAATTTTGCAGGGGTTCATGATTCATACTGGACACATGCTTGTGATGTAGATGAAATGAATAGAATACTTAGAGAGAAGTTCGTCGAACTTTATGAGACTCCAATACTAGAAAATTTATTGGAGGGCTTTCAGCGATCTTTTCCTACATTGGACTTTCCTCCTCTACCCGAACGTGGAGAATTCGATCTAAAGGAAGTTCTGGAGTCGCCTTACTTCTTCAACTAAGTTTATATGGGTGCATTTGTCTTCACTTTTTGCTCTCTTAACGCGTGCAACCGGGTTTTGCCTGCTAAAGTACACCTTCAAGGCTTCAACTATTACTCATCTACATTTCAAAGAGTAATAAAGGATGATGCTTACAGAGTCCCTGGTGCAGACTGGCCACTGTATTATATATACAGATGAGGTTTTCATCTCTTGAAAGGCTCTTCTCAGGTCGACTTCAAAAGAGCTCTCGACTCGAATACGCAGAAGAAAATGGTTAGGCAGACAATAATCATCAGACACAGCAATAGTAGTCATCTTCAACTAGAACTGTTGGACCAACAAAGATCTGCCAGAATTTTCCATCCGCTTCCATTCATCGGATACGGTTAAAGAAGTCGAATGGACCATACAGACCATACTCTTCCCAGAAAGAGAATTCTGATATGATCAAGATTGCTACAGTAAGTAACAAAGGATTGCTTGTACATATCTCCCCATCCTATGATTCAAATGAAATGTGAAAGTGGTGAAAAAAGGATCACCATTGCCATTTTACTTGATTCATCACAAGTTGTGCTCCAAGATTGCACCTGTCTCTTTGTGACTTGACTCATTTCAGTCTCTGCAGCTCTGATTCTTACAAATTGTTGCAGTCTGCTTTCATGTATATGTAAATGTTTGTGCA

Coding sequence (CDS)

ATGTCCTTTTGCCAGTGTTCTCTCAGTCTCACCAGCAAAATTGATCATTCTCTTCTGTTGCAAAAGCCCACAAATTCTCACCAAAACCCTTCGATGATATCTACGTGGAAAACCATTGCCAAGCAAGCTATTTCTAGGAACCGGAAGTTTCATCTTGATTGGTATTGCTTTTCCCGTTCCGTTCTGGGTCATCCCCACGAGGCTTTGTTTCGCGAGAAATTGATATCTGGTAATTTTGTTCTTAGTTCACTTCCGAAGTTCGGGATTTTGGAAATGGGTATTGGTCGAAATGAAATTTCGTCCCAGGAAGATTATGGAAGCAGATTCTGTTTTGGGTCTTTGGGAGCTCGGATTGGGTTAAATGGGTCGTGCCCAAAAGGTTATTCTAGTGTTGCTGAGGCGGTTTCGTCAACAGATGTGGACGAAGATGCATCTGTTGACGATGAAATCCAAGAGTTATTGCAAGAGATGAGCAAAGAAGAGAAGAGGCAGGTTGAGTATAGGAGGAGGAGGCTGAAAATGGCGAAGGGAATGGGACAAGGGAAGTATCAAATGCTGAAGAGGAGGCAGGTGGCCATAGAGACCGAGGCGTGGGAACAGGCAGTCAAGGAATACAAGGAGCTATTGATGGATATGTGTAAGCAGAAGTTAGCACCTAATCTGCCGTACATGAAGTCCTTGTTCCTTGGCTGGTTCGAGCCCTTGCATGATGCTATAAGTAAAGAGCAAGAATTGATACGGGAAGGGAAAAACAGGACTGCATATGCTCCTTATTTTGATCAATTACCTGCTGATATGATGTCTGTAATCACGATGCATAAGTTGATGGGGTTGTTGATGATGGGACATGAGCACGGTAATGCCAGGGTTGTGCAGGCTGCTTGTGTAATAGGAGATGCTATCGAACAAGAGGTTAGAATTCACAAATTCTTGGAGAAAATGAAAAAGAAAAGGCACAACAAAGATAATGAGAATGATGAAAAGCCCGATTCTCAAATCAAGGAACAAGAGAGGTTAAGGAAAAAAGTCACTAACTTGATTAAAAAACAAAAGCTTCCGGCTGTAAGACAGATAGTGAAGGGAGCGGATGATTCAAAACCATGGGGCCAGGATGCCAAAGCAAAGGTTGGGAGCCGTCTAATTGAGTTGTTGACACAAACAGCTTACATACAACCTCCTGCTGATCAGTTGGCTGATGGTCCACCTGATATTCGTCCTGCATTTCGTCACTCATTTAGAACTGTGATGAAACAAGCAATTAAGAATTCCAGCAGGAGATGTGGTGTCATCGAATGTGATCCTTTAGTCATCAAAGGCTTAGAGAGGACTGCAAGACACATGGTGATTCCCTATATGCCAATGTTGGTTCCCCCAGTCAATTGGACAGGCTATGACAAAGGAGGACACATCTTTTTACCATCTTTTGTCATGCGTACTCATGGAGCCAAACAACAACGTGATGCAGTTAAGAGGACCCCAAAGCAACAACTAACTCCAGTTTTTGAGGCCCTAGACACTCTTGGAAATACCAAATGGAGAATAAATAAAAAGATACTCAGTGTTGTGGATAGAATATGGACAAGTGGAGGCCGTCTTGCAGATCTAGTGGATCAGGATGATATTCCACTGCCAGAAAAACCTGATTCTGAGGATGAAACACTGCTAAGAAAGTGGAAGTGGAAAGTCAAATCCGTCAAGAAAGAAAATATGGAGAGGCATTCACAACGTTGTGACATAGAGCTTAAACTTGCTGTAGCACGGAAAATGAAGGATGAGGAAGGTTTTTACTATCCACATAACCTAGATTTTCGTGGCCGTGCTTATCCTATGCATCCGTACTTGAATCATCTTGGTTCAGATCTTTGCCGAGGTATATTGGAGTTTGCAGAAGGTCGCCCTCTTAGGAAGTCTGGCCTACGTTGGCTGAAGATTCACTTGGCAAATCTTTTTGCTGGGGGTGTGGATAAATTATCTCATGATGGGCGAATGGCATTTATTGAGAATCATTTAGAAGATATATTTGATTCTGCTGACAGACCACTCGAAGGAAGACGCTGGTGGTTGAATGCAGAGGATCCGTTTCAGTTTTTAGCTGCATGCATGAATCTTACTGAAGCTTTGAGAAGTTCTTCTCCGGAAACATTTATTTCACATATTCCAATCCACCAGGATGGCTCTTGCAATGGATTACAACACTATGCTGCTCTTGGACGAGACAAGTTAGGAGCAGCTGCTGTCAATCTGGTTGTGAGAGAGAAGCCTGCAGATGTTTACTCGGGGATAGCTGCTAGGGTTCTAGAAATCATGCGGAGGGATGCACAAAAAGATCCAGCAACTTTTCCAGATGCATTGCGTGCAAAAACATTAATAGATCAGGTGGATAGAAAATTGGTGAAGCAGACAGTGATGACATCGGTTTATGGTGTCACCTATATTGGTGCTCGTGATCAGATCAAAAGGAGGCTGAAGGAACGTGCTGCCATATCTGATGATTCAGAGCTCTTTGGCTGTTCTTGCTATGCTGCCAAGACCACGTTGACGGCACTAGGGGAAATGTTTGAAGCAGCCCGTGGGATCATGAGTTGGCTTGGAGATTGTGCAAAAATTATTGCCTCTGAGAATCAACCTGTGCGATGGACTACACCCCTTGGACTACCTGTTGTGCAACCATATCGCAAGTTGGGAAGGCATCTTATCAAAACTTCTCTCCAAATATTGACACTACAACGAGAAACAGACAAGGTGTTGGCAAAGAGGCAGCGGACAGCGTTCCCACCAAATTTTGTTCACTCCCTCGATGGTTCTCATATGATGATGACTGCAGTTGCCTGCAAAAAGGCAGGTTTGAATTTTGCAGGGGTTCATGATTCATACTGGACACATGCTTGTGATGTAGATGAAATGAATAGAATACTTAGAGAGAAGTTCGTCGAACTTTATGAGACTCCAATACTAGAAAATTTATTGGAGGGCTTTCAGCGATCTTTTCCTACATTGGACTTTCCTCCTCTACCCGAACGTGGAGAATTCGATCTAAAGGAAGTTCTGGAGTCGCCTTACTTCTTCAACTAA

Protein sequence

MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMISTWKTIAKQAISRNRKFHLDWYCFSRSVLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGARIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKMAKGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVLESPYFFN

Homology

[Close]

BLAST of Lcy09g003050 vs. ExPASy Swiss-Prot
Match: Q8L6J3 (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT2-TOM PE=2 SV=2)

HSP 1 Score: 1482.2 bits (3836), Expect = 0.0e+00
Identity = 755/1046 (72.18%), Postives = 864/1046 (82.60%), Query Frame = 0


Query: 1    MSFCQCSLSLTSKIDHSLLLQKPT-----NSHQNPSMISTWKTIAKQAISRN-RKFHLDW 60
            MS  +  +SLT K++      KPT       H +P M   W+ I KQ  SR  +K     
Sbjct: 1    MSSTKTPISLTIKLNQ--FTDKPTGLDINRYHNSPIM---WRNIIKQLSSRTPQKLLFSS 60

Query: 61   YCFSRSVLGHPHEALFREK--------LISGNFVL------SSLPKFGILEMGIGRNEIS 120
               + S LG   +++F++         +   N V+        LP    L   + +N+++
Sbjct: 61   KNRTYSFLGFGQDSVFKDNTKFRSLIPISCSNIVMGFQNLGEYLPGDEFLSRPLLKNQVN 120

Query: 121  SQEDYGSRFCFGSLGARIGLNGSCPKGYSSVAE--AVSSTDVDEDASVDDEIQELLQEMS 180
            S +     FC             C K Y+SVAE  AVSSTD +ED SV DE+QELL E+ 
Sbjct: 121  SND-----FC-------------CRKSYASVAEAVAVSSTDAEEDVSVVDEVQELLTELK 180

Query: 181  KEEKRQVEYRRRRLKM-AKGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKL 240
            KEEK+Q  +RRR+ +M   GMG  KYQ LKRRQV +ETEAWEQA KEYKELL DMC+QKL
Sbjct: 181  KEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKL 240

Query: 241  APNLPYMKSLFLGWFEPLHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMG 300
            APNLPY+KSLFLGWFEPL D I++EQEL  +GK++ AYA Y  QLPADMM+VITMHKLMG
Sbjct: 241  APNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMG 300

Query: 301  LLMMGHEHGNARVVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQE 360
            LLM G +HG ARVVQAA VIGDAIEQEVRIH FLEK KK++  KD +  E  +   +EQE
Sbjct: 301  LLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK-EDGEHVTQEQE 360

Query: 361  RLRKKVTNLIKKQKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQL 420
            +LRKKVTNL+KKQKL AV QIV+  DDSKPWGQDAKAKVGSRLIELL QTAYIQPPA+QL
Sbjct: 361  KLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQL 420

Query: 421  ADGPPDIRPAFRHSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVP 480
            A  PPDIRPAF HS RTV K+  K++SRR G+I+CD LV KGLERTARHMVIPYMPMLVP
Sbjct: 421  AVDPPDIRPAFLHSVRTVAKET-KSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVP 480

Query: 481  PVNWTGYDKGGHIFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKK 540
            PV WTGYDKGGH++LPS+VMRTHGA+QQR+AVKR  + QL PVFEALDTLG+TKWRINK+
Sbjct: 481  PVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKR 540

Query: 541  ILSVVDRIWTSGGRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRC 600
            +LSV+DRIW  GGRLADLVD+DD PLPE+PD+EDE L  KW+WKVKSVKKEN ERHSQRC
Sbjct: 541  VLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRC 600

Query: 601  DIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKS 660
            DIELKLAVARKMKDEEGF+YPHN+DFRGRAYPMHP+LNHLGSD+CRG+L FAEGRPL +S
Sbjct: 601  DIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGES 660

Query: 661  GLRWLKIHLANLFAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFL 720
            GLRWLKIHLANLFAGGV+KLS +GR+AF ENH++DIFDSAD+PLEGRRWWLNAEDPFQ L
Sbjct: 661  GLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCL 720

Query: 721  AACMNLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADV 780
            A C+NL+EA+RSSSPET ISHIP+HQDGSCNGLQHYAALGRD+LGAAAVNLV  EKPADV
Sbjct: 721  AVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADV 780

Query: 781  YSGIAARVLEIMRRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQ 840
            YSGIAARVL+IM+RDAQ+DPA FPDA+RA+ L++QVDRKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 781  YSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQ 840

Query: 841  IKRRLKERAAISDDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPV 900
            IKRRLKER AI+DDSELFG +CYAAK TLTALGEMFEAAR IM+WLG+CAKIIASEN+PV
Sbjct: 841  IKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPV 900

Query: 901  RWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHM 960
            RWTTPLGLPVVQPYRK+GRHLIKTSLQILTLQ+ET+KV+ KRQRTAFPPNF+HSLDGSHM
Sbjct: 901  RWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHM 960

Query: 961  MMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFP 1020
            MMTAVAC++AGLNFAGVHDSYWTHACDVD++NRILREKFVELYETPILE LLE FQ S+P
Sbjct: 961  MMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYP 1020

Query: 1021 TLDFPPLPERGEFDLKEVLESPYFFN 1024
            TL FPPLPERG+FDL++VLESPYFFN
Sbjct: 1021 TLLFPPLPERGDFDLRDVLESPYFFN 1021

[Close]

BLAST of Lcy09g003050 vs. ExPASy Swiss-Prot
Match: Q8VWF8 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT2 PE=2 SV=2)

HSP 1 Score: 1481.1 bits (3833), Expect = 0.0e+00
Identity = 749/1029 (72.79%), Postives = 860/1029 (83.58%), Query Frame = 0


Query: 1    MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMIS--TWKTIAKQAISRN-RKFHLDWYCF 60
            MS  +  +SLT K++      KPT    NP   S   W+ I KQ  SR  +K        
Sbjct: 1    MSSTKTPISLTIKLNQ--FTDKPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKNR 60

Query: 61   SRSVLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGAR 120
            + S LG   +++F++     + +  S     +    +G  E    +++ SR     +  +
Sbjct: 61   TYSFLGFGQDSIFKDNTKFRSLIPISCSNIVMGFQNLG--EYLPGDEFLSR---PLIKNQ 120

Query: 121  IGLNGSCPKGYSSVAE--AVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKM- 180
            +  N  C K Y+SVAE  AVSSTD +ED SV DE+ ELL E+ KEEK+Q  +RRR+ +M 
Sbjct: 121  VNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRML 180

Query: 181  AKGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEP 240
              GMG  KYQ LKRRQV +ETEAWEQA KEYKELL DMC+QKLAPNLPY+KSLFLGWFEP
Sbjct: 181  TSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEP 240

Query: 241  LHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAA 300
            L D I++EQEL  +GK++ AYA YF QLPADMM+VITMHKLMGLLM G +HG ARVVQAA
Sbjct: 241  LRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAA 300

Query: 301  CVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPA 360
             VIGDAIEQEVRIH FLEK KK++  KD +  E  +   +EQE+LRKKVTNL+KKQKL A
Sbjct: 301  LVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK-EDGEHVTQEQEKLRKKVTNLMKKQKLRA 360

Query: 361  VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT 420
            V QIV+  DDSKPWGQDA+AKVGSRLI+LL QTAYIQPPA+QLA  PPDIRPAF HS RT
Sbjct: 361  VGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRT 420

Query: 421  VMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS 480
            V K+  K++SRR G+I+CD LV KGLERTARHMVIPYMPMLVPPV WTGYDKGGH++LPS
Sbjct: 421  VAKET-KSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPS 480

Query: 481  FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLAD 540
            +VMRTHGA+QQR+AVKR  + QL PVFEALDTLGNTKWRINK++LSVVDRIW  GGRLAD
Sbjct: 481  YVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLAD 540

Query: 541  LVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG 600
            LVD+DD PLPE+PD+EDE L  KW+WKVKSVKKEN ERHSQRCDIELKLAVARKMKDEE 
Sbjct: 541  LVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEES 600

Query: 601  FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGV 660
            F+YPHN+DFRGRAYPMHP+LNHLGSD+CRG+LEFAEGRPL +SGLRWLKIHLANLFAGGV
Sbjct: 601  FFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGV 660

Query: 661  DKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPET 720
            +KLS +GR+ F ENH++DIFDS+D+PLEGRRWWLNAEDPFQ LA C+NL+EA+RSSSPET
Sbjct: 661  EKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPET 720

Query: 721  FISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQ 780
             +SHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLV  EKPADVYSGIAARVL+IM+RDAQ
Sbjct: 721  SVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQ 780

Query: 781  KDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSEL 840
            +DPA FPDA+RA+ L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AI+DDSEL
Sbjct: 781  RDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSEL 840

Query: 841  FGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKL 900
            FG +CYAAK TLTALGEMFEAAR IM+WLG+CAKIIASEN+PVRWTTPLGLPVVQPYRK+
Sbjct: 841  FGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKI 900

Query: 901  GRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGV 960
            GRHLIKTSLQILTLQRET+KV+ KRQRTAFPPNF+HSLDGSHMMMTAVAC++AGLNFAGV
Sbjct: 901  GRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGV 960

Query: 961  HDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKE 1020
            HDSYWTHACDVD++NRILREKFVELYE PILE LLE FQ S+PTL FPPLPERG+FD+++
Sbjct: 961  HDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRD 1020

Query: 1021 VLESPYFFN 1024
            VLESPYFFN
Sbjct: 1021 VLESPYFFN 1020

[Close]

BLAST of Lcy09g003050 vs. ExPASy Swiss-Prot
Match: Q8L6J5 (DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT1-TOM PE=2 SV=2)

HSP 1 Score: 1409.8 bits (3648), Expect = 0.0e+00
Identity = 722/1017 (70.99%), Postives = 818/1017 (80.43%), Query Frame = 0


Query: 36   WKTIAKQAISRN-RKFH----LDWYCFSRSV-LGHPHEALFREKLISGNFVLSSLPKF-- 95
            W+ I+K A SR  R  H    L +  +S S     P + L  E     N  LS    F  
Sbjct: 2    WRYISKHAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTHPNLGLSQNSIFSR 61

Query: 96   ---------GILE-------MGIGRNEISSQEDYGSRFC----FGSLGARIGLNGSCPKG 155
                     GI E       +G+ +N   S      R C     GSLG          + 
Sbjct: 62   ISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRL--------RS 121

Query: 156  YSSVAEAVSSTDVDEDASVDDEIQELLQEMSKE-EKRQVEYRRRRLKMAKGMGQGKYQML 215
            Y S AEA+ ST  +ED    DEIQEL++EM KE E  +   + ++ K   GMG GKY  L
Sbjct: 122  YGSAAEAIVSTS-EEDI---DEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFL 181

Query: 216  KRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISKEQELI 275
            +RRQ+ +ETEAWE+A KEY+ELLMDMC+QKLAPNLPYMKSLFLGWFEPL DAI+ EQ+L 
Sbjct: 182  RRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLC 241

Query: 276  REGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVR 335
             EGKNR AYAP+FDQLPA+MM+VITMHKLMGLLM G   G+ARVVQAA  IG+AIE E R
Sbjct: 242  DEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEAR 301

Query: 336  IHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVRQIVKGADDSK 395
            IH+FLEK KK  +    + +E P   +KE+ERLRKKV  L+KKQKL  VR+IVK  DD K
Sbjct: 302  IHRFLEKTKKS-NALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEK 361

Query: 396  PWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVMKQAIKNSSRR 455
            PWGQD   KVG RLI++L +TAYIQPP DQL DGPPDIRPAF H+ +TV        SRR
Sbjct: 362  PWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV---ETMKGSRR 421

Query: 456  CGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQR 515
             GVI+CDPLV KGL++TARHMVIPYMPMLVPP +W GYDKGG++FLPS++MRTHGAKQQR
Sbjct: 422  YGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQR 481

Query: 516  DAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLVDQDDIPLPEK 575
            +AVKR PK+QL PVF+ALDTLGNTKWR+N+K+L +VDRIW SGGRLADLVD++D+PLPE 
Sbjct: 482  EAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEA 541

Query: 576  PDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGR 635
            PD+EDE  +RKWKWKVK VKKEN ERHSQRCDIELKLAVARKMKDE+GFYYPHNLDFRGR
Sbjct: 542  PDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGR 601

Query: 636  AYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMAFI 695
            AYPMHPYLNHLGSDLCRGILEFAEGRPL  SGLRWLKIHLAN++ GGVDKLS++GR+AF 
Sbjct: 602  AYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFS 661

Query: 696  ENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFISHIPIHQDGS 755
            ENHLEDIFDSA+RPLEG+RWWL AEDPFQ LA C+N+ EALRS SPET IS++PIHQDGS
Sbjct: 662  ENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGS 721

Query: 756  CNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKDPATFPDALRA 815
            CNGLQHYAALGRDKLGAAAVNLV  +KPADVYSGIAARVL+IM+RDA KDPA  P+ +RA
Sbjct: 722  CNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRA 781

Query: 816  KTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKTTL 875
            + LI+QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER  I DD+ELF  +CYAAKTTL
Sbjct: 782  RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTL 841

Query: 876  TALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL 935
            TALGEMFEAAR IMSWLGDCAKIIA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL
Sbjct: 842  TALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL 901

Query: 936  TLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVD 995
            TLQRETDKV+ KRQRTAFPPNFVHSLDGSHMMMTA+ACK++GL+FAGVHDSYWTHACDVD
Sbjct: 902  TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVD 961

Query: 996  EMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVLESPYFFN 1024
            +MN+ILREKFVELY+ PILENLLE FQ+SFP L FPPLPERG+FDL+EVLESPYFFN
Sbjct: 962  QMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002

[Close]

BLAST of Lcy09g003050 vs. ExPASy Swiss-Prot
Match: Q93Y94 (DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT1 PE=2 SV=1)

HSP 1 Score: 1402.5 bits (3629), Expect = 0.0e+00
Identity = 718/1017 (70.60%), Postives = 822/1017 (80.83%), Query Frame = 0


Query: 36   WKTIAKQAISRN-RKFH----LDWYCFSRSV-LGHPHEALFREKLISGNFVLSSLPKF-- 95
            W+ I+KQA SR  R  H    L +  +S S     P + L  E   + N  LS    F  
Sbjct: 2    WRYISKQAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNSIFSR 61

Query: 96   ---------GILE-------MGIGRNEISSQEDYGSRFC----FGSLGARIGLNGSCPKG 155
                     GI E       +G+ +N + S      R C     GSLG          + 
Sbjct: 62   ISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFL--------RS 121

Query: 156  YSSVAEAVSSTDVDEDASVDDEIQELLQEMSKE-EKRQVEYRRRRLKMAKGMGQGKYQML 215
            Y S AEA++ST  +ED    DEIQEL++EM+KE E  +   + ++ K   GMG GKY +L
Sbjct: 122  YGSAAEAIASTS-EEDI---DEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLL 181

Query: 216  KRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISKEQELI 275
            +RRQ+ +ETEAWE+A KEY+ELLMDMC+QKLAPNLPYMKSLFLGWFEPL DAI+ EQ+L 
Sbjct: 182  RRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLC 241

Query: 276  REGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVR 335
             EGKNR AYAP+FDQLPA+MM+VITMHKLMGLLM G   G+ARVVQAA  IG+AIE E R
Sbjct: 242  DEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEAR 301

Query: 336  IHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVRQIVKGADDSK 395
            IH+FLEK KK  +    + ++ P   +KE+ER+RKKV  L+KKQKL  VR+IVK  DD K
Sbjct: 302  IHRFLEKTKKS-NALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEK 361

Query: 396  PWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVMKQAIKNSSRR 455
            PWGQD   KVG RLI++L +TAYIQPP DQL D PPDIRPAF H+ +TV        SRR
Sbjct: 362  PWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV---ETMKGSRR 421

Query: 456  CGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQR 515
             GVI+CDPLV KGL++TARHMVIPYMPMLVPP +W GYDKG ++FLPS++MRTHGAKQQR
Sbjct: 422  YGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQR 481

Query: 516  DAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLVDQDDIPLPEK 575
            +AVKR PK+QL PVF+ALDTLGNTKWR+N+K+L +VDRIW SGGRLADLVD++D+PLPE+
Sbjct: 482  EAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEE 541

Query: 576  PDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGR 635
            PD+EDE  +RKWKWKVK VKKEN ERHSQRCDIELKLAVARKMKDE+GFYYPHNLDFRGR
Sbjct: 542  PDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGR 601

Query: 636  AYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMAFI 695
            AYPMHPYLNHLGSDLCRGILEFAEGRPL KSGLRWLKIHLAN++ GGVDKLS++GR+AF 
Sbjct: 602  AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFS 661

Query: 696  ENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFISHIPIHQDGS 755
            ENH+EDIFDSA+RPLEG+RWWL AEDPFQ LA C+N+ EALRS SPET IS++PIHQDGS
Sbjct: 662  ENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGS 721

Query: 756  CNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKDPATFPDALRA 815
            CNGLQHYAALGRD LGAAAVNLV  +KPADVYSGIAARVL+IM+RDA KDPA  P+ +RA
Sbjct: 722  CNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRA 781

Query: 816  KTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKTTL 875
            + LI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I DD+ELF  +CYAAKTTL
Sbjct: 782  RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTL 841

Query: 876  TALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL 935
            TALGEMFEAAR IMSWLGDCAKIIA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL
Sbjct: 842  TALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL 901

Query: 936  TLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVD 995
            TLQRETDKV+ KRQRTAFPPNFVHSLDGSHMMMTA+ACK++GL+FAGVHDSYWTHA DVD
Sbjct: 902  TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVD 961

Query: 996  EMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVLESPYFFN 1024
            +MN+ILREKFVELY+ PILENLLE FQ+SFP L FPPLPERG+FDL+EVLESPYFFN
Sbjct: 962  QMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002

[Close]

BLAST of Lcy09g003050 vs. ExPASy Swiss-Prot
Match: Q9LFV6 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPOT2 PE=1 SV=1)

HSP 1 Score: 1323.5 bits (3424), Expect = 0.0e+00
Identity = 685/1034 (66.25%), Postives = 813/1034 (78.63%), Query Frame = 0


Query: 1    MSFCQCSLSL---TSKIDHSLLLQKPTNSHQNP--SMISTWKTIAKQAISRNRKFHLDWY 60
            MS  Q  L L   T   DH + L KP  S  NP       W+ IAKQAISR+    L+  
Sbjct: 1    MSSAQTPLFLANQTKVFDHLIPLHKPFISSPNPVSQSFPMWRNIAKQAISRSAA-RLNVS 60

Query: 61   CFSRSVLGHPHEALFREKLISGNFVLSSLPKFG---ILEMGIGRNEISSQEDYGSRFCFG 120
              +R +L    E++F  K +S  F +   P  G       GI R E  S+    S  C  
Sbjct: 61   SQTRGLLVSSPESIF-SKNLSFRFPVLGSPCHGKGFRCLSGITRREEFSK----SERC-- 120

Query: 121  SLGARIGLNGSCPKGYSSVA-EAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRR 180
                   L+G+  +GY+SVA E V STDV+E+  VD    ELL+EM KE+KR+  +R  R
Sbjct: 121  -------LSGTLARGYTSVAEEEVLSTDVEEEPEVD----ELLKEMKKEKKRE-SHRSWR 180

Query: 181  LKMAK--GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFL 240
            +K     GMG+ K+Q L RRQV IETE WE+A  EY ELL DMC+QKLAPNLPY+KSLFL
Sbjct: 181  MKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFL 240

Query: 241  GWFEPLHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNAR 300
            GWFEPL DAI+K+QEL R GK++  YA Y DQLPAD +SVITMHKLMG LM G ++G  +
Sbjct: 241  GWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGGDNGCVK 300

Query: 301  VVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKK 360
            VV AAC +GDAIEQE+RI  FL+K KK   N+++   E  ++ +KEQ++LRKKV  LIKK
Sbjct: 301  VVHAACTVGDAIEQEIRICTFLDKKKKGDDNEESGGVEN-ETSMKEQDKLRKKVNELIKK 360

Query: 361  QKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFR 420
            QKL AVR+I++  D +KPW  D +AKVGSRLIELL +TAYIQ PADQ  +  PD+RPAF 
Sbjct: 361  QKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFV 420

Query: 421  HSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGH 480
            H+F+  + +   NS R+ GVIECDPLV KGLE++ R+ V+PYMPMLVPP+ W+GYDKG +
Sbjct: 421  HTFK--VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAY 480

Query: 481  IFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSG 540
            +FL S++M+THGAKQQR+A+K  PK QL PVFEALDTLG+TKWR+NK++L+VVDRIW+SG
Sbjct: 481  LFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSG 540

Query: 541  GRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKM 600
            G +AD+VD+ D+PLPEKPD+EDE +L+KWKW+VKS KK N ERHSQRCD ELKL+VARKM
Sbjct: 541  GCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKM 600

Query: 601  KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANL 660
            KDEE FYYPHN+DFRGRAYPM P+LNHLGSDLCRG+LEFAEGRP+  SGLRWLKIHLANL
Sbjct: 601  KDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANL 660

Query: 661  FAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRS 720
            +AGGVDKLS DGR+AF ENHL+DIFDSADRPLEG RWWL AEDPFQ LA C++LTEALRS
Sbjct: 661  YAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRS 720

Query: 721  SSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIM 780
             SPET +SHIPIHQDGSCNGLQHYAALGRD LGA AVNLV  EKPADVYSGIA RVL+IM
Sbjct: 721  PSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIM 780

Query: 781  RRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAIS 840
            RRDA +DP  FP+ALRA+ L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER+   
Sbjct: 781  RRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFG 840

Query: 841  DDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQ 900
            D+ E+FG +CYAAK TL A+ EMF+AAR IM W G+CAKIIASEN+ VRWTTPLGLPVVQ
Sbjct: 841  DEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQ 900

Query: 901  PYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL 960
            PY ++G  L+KTSLQ L+LQ ETD+V+ +RQRTAFPPNF+HSLDGSHMMMTAVACK+AG+
Sbjct: 901  PYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGV 960

Query: 961  NFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGE 1020
             FAGVHDS+WTHACDVD++N ILREKFVELY  PILENLLE F++SFP LDFPPLPERG+
Sbjct: 961  CFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGD 1011

Query: 1021 FDLKEVLESPYFFN 1024
             DLK VL+SPYFFN
Sbjct: 1021 LDLKVVLDSPYFFN 1011

[Close]

BLAST of Lcy09g003050 vs. ExPASy TrEMBL
Match: A0A6J1JUF5 (DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111489816 PE=3 SV=1)

HSP 1 Score: 1889.0 bits (4892), Expect = 0.0e+00
Identity = 928/1027 (90.36%), Postives = 981/1027 (95.52%), Query Frame = 0


Query: 1    MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYCFS 60
            MSFCQCS +LT K ++ LLLQ+PTN HQNP MIST  WKTIAKQAIS+NR+FHLDW+C S
Sbjct: 1    MSFCQCSFNLTGKFENFLLLQQPTNFHQNPPMISTSMWKTIAKQAISKNRQFHLDWHCLS 60

Query: 61   RS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGA 120
            RS  V+G  +E++ REKLIS  FVLSSLPKFGI E+GIGR+E+ SQ+DYGSRFCFGS+G 
Sbjct: 61   RSHGVMGRLNESIIREKLISDKFVLSSLPKFGISELGIGRSEVLSQDDYGSRFCFGSMGV 120

Query: 121  RIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKMAK 180
            RIGLNGSCPKGYSSVAEAVSSTDVDED+S+D+EIQELLQEM KEEKRQV+ RRR LK  K
Sbjct: 121  RIGLNGSCPKGYSSVAEAVSSTDVDEDSSIDEEIQELLQEMRKEEKRQVQRRRRGLKRVK 180

Query: 181  GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLH 240
            GMG+ KYQMLKRRQVAIETEAW+QAVKEYKELLMDMC+QKLAPNLPYMKSLFLGWFEPL 
Sbjct: 181  GMGEEKYQMLKRRQVAIETEAWKQAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 240

Query: 241  DAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACV 300
            DAISKEQELIR GKNRTAYAPYFDQL ADMMSV+TMHKLMGLLMMGHEHGNARVVQAACV
Sbjct: 241  DAISKEQELIRIGKNRTAYAPYFDQLSADMMSVVTMHKLMGLLMMGHEHGNARVVQAACV 300

Query: 301  IGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVR 360
            IGDAIEQEVRIH+FLEKMKKK+H+KDNEN++KPDSQ+KEQERLRKKVTNLIK QKLPAVR
Sbjct: 301  IGDAIEQEVRIHRFLEKMKKKKHDKDNENNDKPDSQLKEQERLRKKVTNLIKMQKLPAVR 360

Query: 361  QIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVM 420
             IVKGADDSKPWG DAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFR VM
Sbjct: 361  HIVKGADDSKPWGPDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRIVM 420

Query: 421  KQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFV 480
            K+A KNSSRR GVIECDPLV+KGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSF+
Sbjct: 421  KEANKNSSRRYGVIECDPLVVKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFI 480

Query: 481  MRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLV 540
            MRT GA QQR+AVKRTPKQQLTPVFEALDTLGNTKWRINKKILS+VDRIWTSGG LADLV
Sbjct: 481  MRTRGANQQREAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSIVDRIWTSGGCLADLV 540

Query: 541  DQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFY 600
            D+DD+PLPEKPDSEDETLLRKWKWKVKSVKKEN+ERHSQRCDIELKLAVARKMKDEEGFY
Sbjct: 541  DRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENVERHSQRCDIELKLAVARKMKDEEGFY 600

Query: 601  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 660
            +PHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK
Sbjct: 601  FPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 660

Query: 661  LSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFI 720
            LSHDGR+ FI++H+EDIFDSADRPLEGRRWWLNAEDPFQFLA CMNLTEALRSSSPET I
Sbjct: 661  LSHDGRITFIDDHVEDIFDSADRPLEGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETVI 720

Query: 721  SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKD 780
            SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL V EKPADVYSGIAARVLEI+R+DAQ+D
Sbjct: 721  SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLTVTEKPADVYSGIAARVLEIVRKDAQRD 780

Query: 781  PATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFG 840
            P TFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDD+ELFG
Sbjct: 781  PETFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDTELFG 840

Query: 841  CSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 900
            C+CYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR
Sbjct: 841  CACYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 900

Query: 901  HLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 960
            HL+KTSLQ+LTLQ+ETDKVL KRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD
Sbjct: 901  HLVKTSLQVLTLQQETDKVLVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 960

Query: 961  SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVL 1020
            SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQ+SFP LDFPPLPERGE DLKEVL
Sbjct: 961  SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQQSFPVLDFPPLPERGELDLKEVL 1020

Query: 1021 ESPYFFN 1024
            ESPYFFN
Sbjct: 1021 ESPYFFN 1027

[Close]

BLAST of Lcy09g003050 vs. ExPASy TrEMBL
Match: A0A6J1FHA8 (DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111445458 PE=3 SV=1)

HSP 1 Score: 1879.0 bits (4866), Expect = 0.0e+00
Identity = 924/1027 (89.97%), Postives = 978/1027 (95.23%), Query Frame = 0


Query: 1    MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYCFS 60
            MSFCQCS +LT K ++ LLLQ+PTN HQNP MIST  WKTIAKQAIS+NR+FHLDW+C S
Sbjct: 1    MSFCQCSFNLTGKFENFLLLQQPTNFHQNPPMISTSMWKTIAKQAISKNRQFHLDWHCLS 60

Query: 61   RS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGA 120
            RS  V+G  +E++ REKLIS  FVLSSLPKFGI E+GIGR+E+ SQEDYGSRFCFGS+G 
Sbjct: 61   RSHGVMGRLNESIIREKLISDKFVLSSLPKFGISELGIGRSEVLSQEDYGSRFCFGSMGV 120

Query: 121  RIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKMAK 180
            RIGLNGS PKGYSSVAEAVSSTDVDED+S D+EIQELLQEM KEEKRQV+ RRRRLK  K
Sbjct: 121  RIGLNGSIPKGYSSVAEAVSSTDVDEDSSSDEEIQELLQEMRKEEKRQVQRRRRRLKWVK 180

Query: 181  GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLH 240
            GMG+ KYQMLKRRQVAIETEAW+QAVKEYKELLMDMC+QKLAPNLPYMKSLFLGWFEPL 
Sbjct: 181  GMGEQKYQMLKRRQVAIETEAWKQAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 240

Query: 241  DAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACV 300
            DAISKEQELIR GKNR AYAPYFDQL ADMMSV+TMHKL+GLLMMGHEHGNARVVQAAC 
Sbjct: 241  DAISKEQELIRIGKNRAAYAPYFDQLSADMMSVVTMHKLIGLLMMGHEHGNARVVQAACA 300

Query: 301  IGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVR 360
            IGDAIEQEVRIH+FLEKMKKK+H+KDNEN++KPDSQ+KEQE LRKKVTNLIKKQKLPAVR
Sbjct: 301  IGDAIEQEVRIHRFLEKMKKKKHDKDNENNDKPDSQLKEQEWLRKKVTNLIKKQKLPAVR 360

Query: 361  QIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVM 420
             IVKGADDSKPWG DAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFR VM
Sbjct: 361  HIVKGADDSKPWGPDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRIVM 420

Query: 421  KQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFV 480
            K+A KNSSRR GVIECDPLV+KGLE+TARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSF+
Sbjct: 421  KEANKNSSRRYGVIECDPLVVKGLEKTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFI 480

Query: 481  MRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLV 540
            MRT GA QQR+AVKRTPKQQLTPVFEALDTLGNTKWRINKKILS+VDRIWTSGGRLADLV
Sbjct: 481  MRTRGANQQREAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSIVDRIWTSGGRLADLV 540

Query: 541  DQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFY 600
            D+DD+PLPEKPDSEDETLLRKWKWKVKSVKKEN+ERHSQRCDIELKLAVA KMKDEEGFY
Sbjct: 541  DRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENVERHSQRCDIELKLAVAHKMKDEEGFY 600

Query: 601  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 660
            YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPL KSGLRWLKIHLANLFAGGVDK
Sbjct: 601  YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAGGVDK 660

Query: 661  LSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFI 720
            LSHDGR+ FI++H+EDIFDSADRPLEGRRWWLNAEDPFQFLA CMNLTEALRSSSPET I
Sbjct: 661  LSHDGRITFIDDHVEDIFDSADRPLEGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETVI 720

Query: 721  SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKD 780
            SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL VREKPADVYSGIAARVLEI+R+DAQ+D
Sbjct: 721  SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLAVREKPADVYSGIAARVLEIVRKDAQRD 780

Query: 781  PATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFG 840
            P TFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDD+ELFG
Sbjct: 781  PETFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDTELFG 840

Query: 841  CSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 900
            C+CYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLG+
Sbjct: 841  CACYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGK 900

Query: 901  HLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 960
            HL+KTSLQ+LTLQ+ETDKVL KRQRTAFPPNFVHSLDGSHMMMTAVACK+AGLNFAGVHD
Sbjct: 901  HLVKTSLQVLTLQQETDKVLVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHD 960

Query: 961  SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVL 1020
            SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQ+SFP LDFPPLPERGE DLKEVL
Sbjct: 961  SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQQSFPALDFPPLPERGELDLKEVL 1020

Query: 1021 ESPYFFN 1024
            ESPYFFN
Sbjct: 1021 ESPYFFN 1027

[Close]

BLAST of Lcy09g003050 vs. ExPASy TrEMBL
Match: A0A6J1C0Y4 (DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111006419 PE=3 SV=1)

HSP 1 Score: 1875.5 bits (4857), Expect = 0.0e+00
Identity = 936/1029 (90.96%), Postives = 970/1029 (94.27%), Query Frame = 0


Query: 1    MSFCQCSLSLTSKID--HSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYC 60
            MSFCQCS +LTSK D  HSL LQKPTN H  PSMIST  WK IAKQAISRNRKF LDW+ 
Sbjct: 1    MSFCQCSSNLTSKFDHHHSLPLQKPTNFHLAPSMISTSVWKIIAKQAISRNRKFRLDWHS 60

Query: 61   FSRS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSL 120
            FSRS  VLG PHE+LF EK +SG+ V SSLPKFG  EM IGRNEI SQE YGSRFCFGS+
Sbjct: 61   FSRSHGVLGRPHESLFPEKFMSGSSVFSSLPKFGTWEMDIGRNEILSQEVYGSRFCFGSV 120

Query: 121  GARIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKM 180
            G RIGLNG CPKG+SSVAEAVSSTDVDEDASVDDEIQELLQEM+KEEKRQVEYRRRR KM
Sbjct: 121  GTRIGLNGMCPKGFSSVAEAVSSTDVDEDASVDDEIQELLQEMTKEEKRQVEYRRRRQKM 180

Query: 181  AKGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEP 240
            AKGMGQGKYQMLKRRQV IETEAWE AVKEYKELLMDMC+QKLAPNLPYMKSLFLGWFEP
Sbjct: 181  AKGMGQGKYQMLKRRQVKIETEAWELAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEP 240

Query: 241  LHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAA 300
            L DAI KEQELIREGKNRTAYAPYFD+LPADMMSVITMHKLMGLLMMGHEHGNARVVQAA
Sbjct: 241  LRDAIIKEQELIREGKNRTAYAPYFDRLPADMMSVITMHKLMGLLMMGHEHGNARVVQAA 300

Query: 301  CVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPA 360
            CVIGDAIEQE+RIH FLEKMKKK+H+KD EN++KPDS IKEQE+LRKKVTNLIKKQKLPA
Sbjct: 301  CVIGDAIEQEIRIHNFLEKMKKKKHDKDGENNDKPDSLIKEQEKLRKKVTNLIKKQKLPA 360

Query: 361  VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT 420
            VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT
Sbjct: 361  VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT 420

Query: 421  VMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS 480
            VMK+A KNSSRR GVIECDPLV+KGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS
Sbjct: 421  VMKEANKNSSRRYGVIECDPLVVKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS 480

Query: 481  FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLAD 540
            FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINK+ILSVVDRIWT GGRLAD
Sbjct: 481  FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKRILSVVDRIWTGGGRLAD 540

Query: 541  LVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG 600
            LVD+DD+PLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG
Sbjct: 541  LVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG 600

Query: 601  FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGV 660
            FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGL WLKIHLANLFAGGV
Sbjct: 601  FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLNWLKIHLANLFAGGV 660

Query: 661  DKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPET 720
            DKLSHDGRM FIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRS SPET
Sbjct: 661  DKLSHDGRMTFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSFSPET 720

Query: 721  FISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQ 780
            FISHIP+HQDGSCNGLQHYAALGRDKLGA AVNLV  EKPADVY+GIAARVLEIM+RDAQ
Sbjct: 721  FISHIPVHQDGSCNGLQHYAALGRDKLGATAVNLVTGEKPADVYTGIAARVLEIMQRDAQ 780

Query: 781  KDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSEL 840
            +DPA FPDALRAK LIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERA+IS    +
Sbjct: 781  RDPAIFPDALRAKRLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERASISXXXXV 840

Query: 841  FGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKL 900
               +  + + TLTALGEMFEAARGIM+WLGDCAKIIASENQPVRWTTPLGLPVVQPYR L
Sbjct: 841  MSSNIMSEQITLTALGEMFEAARGIMNWLGDCAKIIASENQPVRWTTPLGLPVVQPYRVL 900

Query: 901  GRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGV 960
            GRHLIKTSLQ+LTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL+FAGV
Sbjct: 901  GRHLIKTSLQVLTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLSFAGV 960

Query: 961  HDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKE 1020
            HDSYWTHACDVDEMNRILREKFVELYE PILENLLEGFQRSFPTL+FPPLPERGEFDLKE
Sbjct: 961  HDSYWTHACDVDEMNRILREKFVELYEMPILENLLEGFQRSFPTLNFPPLPERGEFDLKE 1020

Query: 1021 VLESPYFFN 1024
            VLESPYFFN
Sbjct: 1021 VLESPYFFN 1029

[Close]

BLAST of Lcy09g003050 vs. ExPASy TrEMBL
Match: A0A0A0KXM5 (DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G642180 PE=3 SV=1)

HSP 1 Score: 1662.1 bits (4303), Expect = 0.0e+00
Identity = 830/998 (83.17%), Postives = 892/998 (89.38%), Query Frame = 0


Query: 32   MIST--WKTIAKQAISRNRKFHLDWYCFSR--SVLGHPHEALFREKLISGNFVLSSLPKF 91
            MIST  WKTIAK+ I RNR+FH DW   SR   VLG P+E+LFR+KLISGNFV SSLPKF
Sbjct: 1    MISTSMWKTIAKRGICRNRQFHPDWRWLSRFNGVLGRPNESLFRDKLISGNFVPSSLPKF 60

Query: 92   GILEMGIGRNEISSQED-YGSRFCFGSLGARIGLNGSCPKGYSSVAEAVSSTDVDEDASV 151
            G  EMG+GR+EI SQED Y SRFCFGS+GARIGLNG CPKGYSSVAEAVSSTDVDEDASV
Sbjct: 61   GSFEMGVGRSEILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASV 120

Query: 152  DDEIQELLQEMSKEEKRQVEYRRRRLKMAKGMGQGKYQMLKRRQVAIETEAWEQAVKEYK 211
            D ++QE +QEMSKEEK        RLK  KGMGQ KY ML+RRQV IE EAWE A KEY+
Sbjct: 121  DGKVQESVQEMSKEEK--------RLKPVKGMGQWKYNMLRRRQVTIEAEAWENAAKEYR 180

Query: 212  ELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISKEQELIREGK-NRTAYAPYFDQLPAD 271
            ELL+DMCKQKLAPNLPY+KSLFLGWFEP  DAI KEQELI+EGK +R  YAPYF QLPAD
Sbjct: 181  ELLVDMCKQKLAPNLPYVKSLFLGWFEPFQDAIIKEQELIQEGKRSRAPYAPYFLQLPAD 240

Query: 272  MMSVITMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNEN 331
             MSVITMHKLMGLLM G EHG+ RVVQAAC IGDAIEQEVRIHKFLEK K++ HNKDNEN
Sbjct: 241  KMSVITMHKLMGLLMRGSEHGSVRVVQAACAIGDAIEQEVRIHKFLEKKKERTHNKDNEN 300

Query: 332  DEKPDSQIKEQERLRKKVTNLIKKQKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLT 391
            +++PD + KEQERLRKKVTNLIKK+K  A  QI K ADDS+PWG++ KAKVG+RLIELL 
Sbjct: 301  NDQPDIERKEQERLRKKVTNLIKKKKHLAAGQIAKRADDSRPWGRELKAKVGARLIELLI 360

Query: 392  QTAYIQPPADQLADGPPDIRPAFRHSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTAR 451
            QTAYIQPPADQLADGPPD RPAF HS +T +K    N   R GVIECDPLV+KGL+ TAR
Sbjct: 361  QTAYIQPPADQLADGPPDPRPAFVHSLKTSVKDG-TNFMGRLGVIECDPLVVKGLDWTAR 420

Query: 452  HMVIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALD 511
             +VIPYMPML+PPV W GYDKGGHI LPSF MRTHGAKQQRDA KRTPKQQLTPVFEALD
Sbjct: 421  QIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKQQLTPVFEALD 480

Query: 512  TLGNTKWRINKKILSVVDRIWTSGGRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSV 571
            TLGNTKWRINK+IL+VV+RIWTSGG LA LVDQDD+PLPEKPD+EDETL++KWKW+V+SV
Sbjct: 481  TLGNTKWRINKRILNVVERIWTSGGHLAGLVDQDDVPLPEKPDTEDETLIKKWKWEVRSV 540

Query: 572  KKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 631
            KKENMERHSQRCDIELKL VARKMKDEEGFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGI
Sbjct: 541  KKENMERHSQRCDIELKLTVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGI 600

Query: 632  LEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRR 691
            LEFAEGR LRKSGL WLKIHLANLFAGGVDKLSHDGRM FIENHLEDIFDSADRPLEG R
Sbjct: 601  LEFAEGRSLRKSGLIWLKIHLANLFAGGVDKLSHDGRMTFIENHLEDIFDSADRPLEGGR 660

Query: 692  WWLNAEDPFQFLAACMNLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAA 751
            WW+NAEDPFQFLA CMNLTEALRSSSPET+ISHIPIHQDGSCNGLQHYAALGRDK GAAA
Sbjct: 661  WWMNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKSGAAA 720

Query: 752  VNLVVREKPADVYSGIAARVLEIMRRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTS 811
            VNLV  EKPADVYSGIAARVLEI++RDAQKDP TFPDAL AK LIDQVDRKLVKQTVMTS
Sbjct: 721  VNLVAGEKPADVYSGIAARVLEILKRDAQKDPETFPDALHAKILIDQVDRKLVKQTVMTS 780

Query: 812  VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGD 871
            VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAK TL ALGEMF AAR IM+WL D
Sbjct: 781  VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKITLEALGEMFVAAREIMNWLSD 840

Query: 872  CAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFP 931
            CAKIIAS+N+ VRWTTPLGLPVVQPYRKLG H IKTSLQ+LTL+RETDK+L+ RQRTAFP
Sbjct: 841  CAKIIASKNETVRWTTPLGLPVVQPYRKLGIHAIKTSLQVLTLRRETDKILSSRQRTAFP 900

Query: 932  PNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL 991
            PNFVHSLD SHMMMTAVACK+AGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL
Sbjct: 901  PNFVHSLDSSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL 960

Query: 992  ENLLEGFQRSFPTLDFPPLPERGEFDLKEVLESPYFFN 1024
            ENLLE F++SFP LDFPPLPERGEF+LKEVL+SPYFFN
Sbjct: 961  ENLLESFEQSFPALDFPPLPERGEFNLKEVLDSPYFFN 989

[Close]

BLAST of Lcy09g003050 vs. ExPASy TrEMBL
Match: A0A1S3CBC4 (DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103498556 PE=3 SV=1)

HSP 1 Score: 1656.3 bits (4288), Expect = 0.0e+00
Identity = 821/998 (82.26%), Postives = 892/998 (89.38%), Query Frame = 0


Query: 32   MIST--WKTIAKQAISRNRKFHLDWYCFSR--SVLGHPHEALFREKLISGNFVLSSLPKF 91
            MIST  WKTIAK+ I RNR+FH DW CFSR   VLG P+E+LFR+KLISGN V SSLPKF
Sbjct: 1    MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60

Query: 92   GILEMGIGRNEISSQED-YGSRFCFGSLGARIGLNGSCPKGYSSVAEAVSSTDVDEDASV 151
            G  +MG+GRN+I SQED Y SRFCFGS+GARIGLNG CPKGYSSVAEAVSSTDVDEDAS+
Sbjct: 61   GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120

Query: 152  DDEIQELLQEMSKEEKRQVEYRRRRLKMAKGMGQGKYQMLKRRQVAIETEAWEQAVKEYK 211
            D E+QELLQEMSKEE         RLK  KGM   KY ML+RRQV +E EAWE+AVKEYK
Sbjct: 121  DGEVQELLQEMSKEE--------TRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYK 180

Query: 212  ELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISKEQELIREGKN-RTAYAPYFDQLPAD 271
            ELL DMCKQKLAPNLPY+KSLFLGWFEP  +AI+KEQELI++GK  R  YAPYF QLPAD
Sbjct: 181  ELLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPAD 240

Query: 272  MMSVITMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNEN 331
             MSVITMHKLMG+LM G EHGN +VV AAC IGDAIEQEVRIHKFLEK K+K+HNK+NEN
Sbjct: 241  KMSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNEN 300

Query: 332  DEKPDSQIKEQERLRKKVTNLIKKQKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLT 391
            + +PDSQ+KEQERLRK V NLIKK+K  AV QI KG DDS+PWG++AKAKVG+RLIELL 
Sbjct: 301  NYQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLI 360

Query: 392  QTAYIQPPADQLADGPPDIRPAFRHSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTAR 451
            QTAYIQPPADQLADGPPDIRPAF HS +TV+     NS  R GVIECDPLVIKGL+RTAR
Sbjct: 361  QTAYIQPPADQLADGPPDIRPAFWHSLKTVVTD---NSVGRLGVIECDPLVIKGLDRTAR 420

Query: 452  HMVIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALD 511
             +VIPYMPML+PPV W GYDKGGHI LPSF MRTHGAKQQRDA KRTPK+QLTPVF+ALD
Sbjct: 421  QIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALD 480

Query: 512  TLGNTKWRINKKILSVVDRIWTSGGRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSV 571
            TLGNTKWRINK+IL VV+RIW+SGG LA LV++DD+PLPEKPD+EDETL++KWKW+++SV
Sbjct: 481  TLGNTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSV 540

Query: 572  KKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 631
            KKENMERHSQRCDIELKLAVAR MKDEEGFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGI
Sbjct: 541  KKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGI 600

Query: 632  LEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRR 691
            LEFAEGRPLRKSGL WLKIHLANLFAGGVDKLSHDGRM F+ENHLEDIFDSAD+PL GRR
Sbjct: 601  LEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRR 660

Query: 692  WWLNAEDPFQFLAACMNLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAA 751
            WWLNAEDPFQFLA CMNLTEALRSSSPET+ISHIPIHQDGSCNGLQHYAALGRDKLGAA+
Sbjct: 661  WWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAAS 720

Query: 752  VNLVVREKPADVYSGIAARVLEIMRRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTS 811
            VNLV  EKPADVYSGIAARV EI+RRDAQKDP TFPDA+ AK LIDQVDRKLVKQTVMTS
Sbjct: 721  VNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTS 780

Query: 812  VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGD 871
            VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAK TL ALGEMF AAR IM+WL D
Sbjct: 781  VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSD 840

Query: 872  CAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFP 931
            CAKIIAS+N+ VRWTTPLGLPVVQPYRKLG   IKTSLQ+LTL+RETDK+L  RQRTAFP
Sbjct: 841  CAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFP 900

Query: 932  PNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL 991
            PNFVHSLD SHMMMTA+AC +AGL FAGVHDSYWTHACDVDEMNRILR+KFVELYETPIL
Sbjct: 901  PNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETPIL 960

Query: 992  ENLLEGFQRSFPTLDFPPLPERGEFDLKEVLESPYFFN 1024
            E+LLE FQ+SFP LDFPPLPERGEFDLKEVL+SPYFFN
Sbjct: 961  EDLLESFQQSFPALDFPPLPERGEFDLKEVLDSPYFFN 987

[Close]

BLAST of Lcy09g003050 vs. NCBI nr
Match: XP_022993982.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1889.0 bits (4892), Expect = 0.0e+00
Identity = 928/1027 (90.36%), Postives = 981/1027 (95.52%), Query Frame = 0


Query: 1    MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYCFS 60
            MSFCQCS +LT K ++ LLLQ+PTN HQNP MIST  WKTIAKQAIS+NR+FHLDW+C S
Sbjct: 1    MSFCQCSFNLTGKFENFLLLQQPTNFHQNPPMISTSMWKTIAKQAISKNRQFHLDWHCLS 60

Query: 61   RS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGA 120
            RS  V+G  +E++ REKLIS  FVLSSLPKFGI E+GIGR+E+ SQ+DYGSRFCFGS+G 
Sbjct: 61   RSHGVMGRLNESIIREKLISDKFVLSSLPKFGISELGIGRSEVLSQDDYGSRFCFGSMGV 120

Query: 121  RIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKMAK 180
            RIGLNGSCPKGYSSVAEAVSSTDVDED+S+D+EIQELLQEM KEEKRQV+ RRR LK  K
Sbjct: 121  RIGLNGSCPKGYSSVAEAVSSTDVDEDSSIDEEIQELLQEMRKEEKRQVQRRRRGLKRVK 180

Query: 181  GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLH 240
            GMG+ KYQMLKRRQVAIETEAW+QAVKEYKELLMDMC+QKLAPNLPYMKSLFLGWFEPL 
Sbjct: 181  GMGEEKYQMLKRRQVAIETEAWKQAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 240

Query: 241  DAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACV 300
            DAISKEQELIR GKNRTAYAPYFDQL ADMMSV+TMHKLMGLLMMGHEHGNARVVQAACV
Sbjct: 241  DAISKEQELIRIGKNRTAYAPYFDQLSADMMSVVTMHKLMGLLMMGHEHGNARVVQAACV 300

Query: 301  IGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVR 360
            IGDAIEQEVRIH+FLEKMKKK+H+KDNEN++KPDSQ+KEQERLRKKVTNLIK QKLPAVR
Sbjct: 301  IGDAIEQEVRIHRFLEKMKKKKHDKDNENNDKPDSQLKEQERLRKKVTNLIKMQKLPAVR 360

Query: 361  QIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVM 420
             IVKGADDSKPWG DAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFR VM
Sbjct: 361  HIVKGADDSKPWGPDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRIVM 420

Query: 421  KQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFV 480
            K+A KNSSRR GVIECDPLV+KGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSF+
Sbjct: 421  KEANKNSSRRYGVIECDPLVVKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFI 480

Query: 481  MRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLV 540
            MRT GA QQR+AVKRTPKQQLTPVFEALDTLGNTKWRINKKILS+VDRIWTSGG LADLV
Sbjct: 481  MRTRGANQQREAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSIVDRIWTSGGCLADLV 540

Query: 541  DQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFY 600
            D+DD+PLPEKPDSEDETLLRKWKWKVKSVKKEN+ERHSQRCDIELKLAVARKMKDEEGFY
Sbjct: 541  DRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENVERHSQRCDIELKLAVARKMKDEEGFY 600

Query: 601  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 660
            +PHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK
Sbjct: 601  FPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 660

Query: 661  LSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFI 720
            LSHDGR+ FI++H+EDIFDSADRPLEGRRWWLNAEDPFQFLA CMNLTEALRSSSPET I
Sbjct: 661  LSHDGRITFIDDHVEDIFDSADRPLEGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETVI 720

Query: 721  SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKD 780
            SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL V EKPADVYSGIAARVLEI+R+DAQ+D
Sbjct: 721  SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLTVTEKPADVYSGIAARVLEIVRKDAQRD 780

Query: 781  PATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFG 840
            P TFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDD+ELFG
Sbjct: 781  PETFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDTELFG 840

Query: 841  CSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 900
            C+CYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR
Sbjct: 841  CACYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 900

Query: 901  HLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 960
            HL+KTSLQ+LTLQ+ETDKVL KRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD
Sbjct: 901  HLVKTSLQVLTLQQETDKVLVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 960

Query: 961  SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVL 1020
            SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQ+SFP LDFPPLPERGE DLKEVL
Sbjct: 961  SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQQSFPVLDFPPLPERGELDLKEVL 1020

Query: 1021 ESPYFFN 1024
            ESPYFFN
Sbjct: 1021 ESPYFFN 1027

[Close]

BLAST of Lcy09g003050 vs. NCBI nr
Match: XP_022939617.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1879.0 bits (4866), Expect = 0.0e+00
Identity = 924/1027 (89.97%), Postives = 978/1027 (95.23%), Query Frame = 0


Query: 1    MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYCFS 60
            MSFCQCS +LT K ++ LLLQ+PTN HQNP MIST  WKTIAKQAIS+NR+FHLDW+C S
Sbjct: 1    MSFCQCSFNLTGKFENFLLLQQPTNFHQNPPMISTSMWKTIAKQAISKNRQFHLDWHCLS 60

Query: 61   RS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGA 120
            RS  V+G  +E++ REKLIS  FVLSSLPKFGI E+GIGR+E+ SQEDYGSRFCFGS+G 
Sbjct: 61   RSHGVMGRLNESIIREKLISDKFVLSSLPKFGISELGIGRSEVLSQEDYGSRFCFGSMGV 120

Query: 121  RIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKMAK 180
            RIGLNGS PKGYSSVAEAVSSTDVDED+S D+EIQELLQEM KEEKRQV+ RRRRLK  K
Sbjct: 121  RIGLNGSIPKGYSSVAEAVSSTDVDEDSSSDEEIQELLQEMRKEEKRQVQRRRRRLKWVK 180

Query: 181  GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLH 240
            GMG+ KYQMLKRRQVAIETEAW+QAVKEYKELLMDMC+QKLAPNLPYMKSLFLGWFEPL 
Sbjct: 181  GMGEQKYQMLKRRQVAIETEAWKQAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 240

Query: 241  DAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACV 300
            DAISKEQELIR GKNR AYAPYFDQL ADMMSV+TMHKL+GLLMMGHEHGNARVVQAAC 
Sbjct: 241  DAISKEQELIRIGKNRAAYAPYFDQLSADMMSVVTMHKLIGLLMMGHEHGNARVVQAACA 300

Query: 301  IGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVR 360
            IGDAIEQEVRIH+FLEKMKKK+H+KDNEN++KPDSQ+KEQE LRKKVTNLIKKQKLPAVR
Sbjct: 301  IGDAIEQEVRIHRFLEKMKKKKHDKDNENNDKPDSQLKEQEWLRKKVTNLIKKQKLPAVR 360

Query: 361  QIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVM 420
             IVKGADDSKPWG DAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFR VM
Sbjct: 361  HIVKGADDSKPWGPDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRIVM 420

Query: 421  KQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFV 480
            K+A KNSSRR GVIECDPLV+KGLE+TARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSF+
Sbjct: 421  KEANKNSSRRYGVIECDPLVVKGLEKTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFI 480

Query: 481  MRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLV 540
            MRT GA QQR+AVKRTPKQQLTPVFEALDTLGNTKWRINKKILS+VDRIWTSGGRLADLV
Sbjct: 481  MRTRGANQQREAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSIVDRIWTSGGRLADLV 540

Query: 541  DQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFY 600
            D+DD+PLPEKPDSEDETLLRKWKWKVKSVKKEN+ERHSQRCDIELKLAVA KMKDEEGFY
Sbjct: 541  DRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENVERHSQRCDIELKLAVAHKMKDEEGFY 600

Query: 601  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 660
            YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPL KSGLRWLKIHLANLFAGGVDK
Sbjct: 601  YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAGGVDK 660

Query: 661  LSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFI 720
            LSHDGR+ FI++H+EDIFDSADRPLEGRRWWLNAEDPFQFLA CMNLTEALRSSSPET I
Sbjct: 661  LSHDGRITFIDDHVEDIFDSADRPLEGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETVI 720

Query: 721  SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKD 780
            SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL VREKPADVYSGIAARVLEI+R+DAQ+D
Sbjct: 721  SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLAVREKPADVYSGIAARVLEIVRKDAQRD 780

Query: 781  PATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFG 840
            P TFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDD+ELFG
Sbjct: 781  PETFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDTELFG 840

Query: 841  CSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 900
            C+CYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLG+
Sbjct: 841  CACYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGK 900

Query: 901  HLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 960
            HL+KTSLQ+LTLQ+ETDKVL KRQRTAFPPNFVHSLDGSHMMMTAVACK+AGLNFAGVHD
Sbjct: 901  HLVKTSLQVLTLQQETDKVLVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHD 960

Query: 961  SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVL 1020
            SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQ+SFP LDFPPLPERGE DLKEVL
Sbjct: 961  SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQQSFPALDFPPLPERGELDLKEVL 1020

Query: 1021 ESPYFFN 1024
            ESPYFFN
Sbjct: 1021 ESPYFFN 1027

[Close]

BLAST of Lcy09g003050 vs. NCBI nr
Match: XP_022134053.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Momordica charantia])

HSP 1 Score: 1875.5 bits (4857), Expect = 0.0e+00
Identity = 936/1029 (90.96%), Postives = 970/1029 (94.27%), Query Frame = 0


Query: 1    MSFCQCSLSLTSKID--HSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYC 60
            MSFCQCS +LTSK D  HSL LQKPTN H  PSMIST  WK IAKQAISRNRKF LDW+ 
Sbjct: 1    MSFCQCSSNLTSKFDHHHSLPLQKPTNFHLAPSMISTSVWKIIAKQAISRNRKFRLDWHS 60

Query: 61   FSRS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSL 120
            FSRS  VLG PHE+LF EK +SG+ V SSLPKFG  EM IGRNEI SQE YGSRFCFGS+
Sbjct: 61   FSRSHGVLGRPHESLFPEKFMSGSSVFSSLPKFGTWEMDIGRNEILSQEVYGSRFCFGSV 120

Query: 121  GARIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKM 180
            G RIGLNG CPKG+SSVAEAVSSTDVDEDASVDDEIQELLQEM+KEEKRQVEYRRRR KM
Sbjct: 121  GTRIGLNGMCPKGFSSVAEAVSSTDVDEDASVDDEIQELLQEMTKEEKRQVEYRRRRQKM 180

Query: 181  AKGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEP 240
            AKGMGQGKYQMLKRRQV IETEAWE AVKEYKELLMDMC+QKLAPNLPYMKSLFLGWFEP
Sbjct: 181  AKGMGQGKYQMLKRRQVKIETEAWELAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEP 240

Query: 241  LHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAA 300
            L DAI KEQELIREGKNRTAYAPYFD+LPADMMSVITMHKLMGLLMMGHEHGNARVVQAA
Sbjct: 241  LRDAIIKEQELIREGKNRTAYAPYFDRLPADMMSVITMHKLMGLLMMGHEHGNARVVQAA 300

Query: 301  CVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPA 360
            CVIGDAIEQE+RIH FLEKMKKK+H+KD EN++KPDS IKEQE+LRKKVTNLIKKQKLPA
Sbjct: 301  CVIGDAIEQEIRIHNFLEKMKKKKHDKDGENNDKPDSLIKEQEKLRKKVTNLIKKQKLPA 360

Query: 361  VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT 420
            VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT
Sbjct: 361  VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT 420

Query: 421  VMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS 480
            VMK+A KNSSRR GVIECDPLV+KGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS
Sbjct: 421  VMKEANKNSSRRYGVIECDPLVVKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS 480

Query: 481  FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLAD 540
            FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINK+ILSVVDRIWT GGRLAD
Sbjct: 481  FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKRILSVVDRIWTGGGRLAD 540

Query: 541  LVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG 600
            LVD+DD+PLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG
Sbjct: 541  LVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG 600

Query: 601  FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGV 660
            FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGL WLKIHLANLFAGGV
Sbjct: 601  FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLNWLKIHLANLFAGGV 660

Query: 661  DKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPET 720
            DKLSHDGRM FIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRS SPET
Sbjct: 661  DKLSHDGRMTFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSFSPET 720

Query: 721  FISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQ 780
            FISHIP+HQDGSCNGLQHYAALGRDKLGA AVNLV  EKPADVY+GIAARVLEIM+RDAQ
Sbjct: 721  FISHIPVHQDGSCNGLQHYAALGRDKLGATAVNLVTGEKPADVYTGIAARVLEIMQRDAQ 780

Query: 781  KDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSEL 840
            +DPA FPDALRAK LIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERA+IS    +
Sbjct: 781  RDPAIFPDALRAKRLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERASISXXXXV 840

Query: 841  FGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKL 900
               +  + + TLTALGEMFEAARGIM+WLGDCAKIIASENQPVRWTTPLGLPVVQPYR L
Sbjct: 841  MSSNIMSEQITLTALGEMFEAARGIMNWLGDCAKIIASENQPVRWTTPLGLPVVQPYRVL 900

Query: 901  GRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGV 960
            GRHLIKTSLQ+LTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL+FAGV
Sbjct: 901  GRHLIKTSLQVLTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLSFAGV 960

Query: 961  HDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKE 1020
            HDSYWTHACDVDEMNRILREKFVELYE PILENLLEGFQRSFPTL+FPPLPERGEFDLKE
Sbjct: 961  HDSYWTHACDVDEMNRILREKFVELYEMPILENLLEGFQRSFPTLNFPPLPERGEFDLKE 1020

Query: 1021 VLESPYFFN 1024
            VLESPYFFN
Sbjct: 1021 VLESPYFFN 1029

[Close]

BLAST of Lcy09g003050 vs. NCBI nr
Match: XP_038890080.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1873.2 bits (4851), Expect = 0.0e+00
Identity = 931/1028 (90.56%), Postives = 971/1028 (94.46%), Query Frame = 0


Query: 1    MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYCFS 60
            MSFCQCS +LTSK D+ LLL+ PT  H+NP MIST  WKT+AKQAI RNR+FHL W+CFS
Sbjct: 1    MSFCQCSSNLTSKFDNFLLLKNPTIFHENPPMISTSMWKTLAKQAICRNRQFHLGWHCFS 60

Query: 61   RS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGA 120
             S  VLG P+E+LFREKLISGNFVLSSLPKFG  EMGIGRNE+ SQEDYGSR CFGS+GA
Sbjct: 61   CSSGVLGRPNESLFREKLISGNFVLSSLPKFGSWEMGIGRNEVLSQEDYGSRLCFGSMGA 120

Query: 121  RIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYR-RRRLKMA 180
            RIGLNGSC KGYSSVAEAVSSTDVDEDASVD+EIQELLQEMSKEEKRQV    RRR+KM 
Sbjct: 121  RIGLNGSCSKGYSSVAEAVSSTDVDEDASVDNEIQELLQEMSKEEKRQVTCSWRRRMKMV 180

Query: 181  KGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPL 240
            KGMG GKYQML+RRQVAIETEAWEQAVKEYKELLMDMC+QKLAP LPYMKSLFLGWFEPL
Sbjct: 181  KGMGAGKYQMLRRRQVAIETEAWEQAVKEYKELLMDMCEQKLAPTLPYMKSLFLGWFEPL 240

Query: 241  HDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAAC 300
             DAISKEQELIR+GKNRT YAPYFDQLPADMMSVITMHKLMGLLMMGHE GN RVVQAAC
Sbjct: 241  CDAISKEQELIRQGKNRTPYAPYFDQLPADMMSVITMHKLMGLLMMGHERGNTRVVQAAC 300

Query: 301  VIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAV 360
            VIGDAIEQEVRIHKFLEK KKK H+KDNEN+++PDSQ+KE E LR+KV+NLIKKQKLPAV
Sbjct: 301  VIGDAIEQEVRIHKFLEKKKKKTHDKDNENNDQPDSQMKEHEGLRQKVSNLIKKQKLPAV 360

Query: 361  RQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTV 420
            RQI+KG DDS+PWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHS RTV
Sbjct: 361  RQILKGTDDSRPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSLRTV 420

Query: 421  MKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSF 480
            MK+A KNS RR GVIECDPLV+KGLERTARH+VIPYMPMLVPPVNWTGYDKGGHIFLPSF
Sbjct: 421  MKKATKNSGRRYGVIECDPLVVKGLERTARHIVIPYMPMLVPPVNWTGYDKGGHIFLPSF 480

Query: 481  VMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADL 540
            VMRTHGAKQQR+AVKR PKQQL PVFEALDTLG+TKWRIN KILSVVDRIWTSGGRLADL
Sbjct: 481  VMRTHGAKQQREAVKRAPKQQLAPVFEALDTLGSTKWRINVKILSVVDRIWTSGGRLADL 540

Query: 541  VDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGF 600
            VD+DD+P PEKPDSEDE LLRKWKWKVKSVKKENMERHSQRCDIELKLAVA KMKDEEGF
Sbjct: 541  VDRDDVPFPEKPDSEDEVLLRKWKWKVKSVKKENMERHSQRCDIELKLAVAGKMKDEEGF 600

Query: 601  YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVD 660
            YYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGL WLKIHLANLFAGGVD
Sbjct: 601  YYPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLGWLKIHLANLFAGGVD 660

Query: 661  KLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETF 720
            KLSHDGRM FIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETF
Sbjct: 661  KLSHDGRMTFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETF 720

Query: 721  ISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQK 780
            ISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLV  EKPADVY GIAARVLEIMRRDAQK
Sbjct: 721  ISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYLGIAARVLEIMRRDAQK 780

Query: 781  DPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELF 840
            DPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDS+LF
Sbjct: 781  DPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSDLF 840

Query: 841  GCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLG 900
            GCSCYAAKTT+TALGEMFEAARGIM+WLGDCAKIIASENQPVRWTTP+GLPVVQPYRKLG
Sbjct: 841  GCSCYAAKTTMTALGEMFEAARGIMNWLGDCAKIIASENQPVRWTTPIGLPVVQPYRKLG 900

Query: 901  RHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVH 960
             H IKTSLQ+LTL+RETDKVL +RQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVH
Sbjct: 901  EHHIKTSLQVLTLRRETDKVLTRRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVH 960

Query: 961  DSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEV 1020
            DSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFP L FPPLPE GEFDLKEV
Sbjct: 961  DSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPGLVFPPLPELGEFDLKEV 1020

Query: 1021 LESPYFFN 1024
            LESPYFFN
Sbjct: 1021 LESPYFFN 1028

[Close]

BLAST of Lcy09g003050 vs. NCBI nr
Match: XP_023551171.1 (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1838.5 bits (4761), Expect = 0.0e+00
Identity = 902/996 (90.56%), Postives = 951/996 (95.48%), Query Frame = 0


Query: 32   MIST--WKTIAKQAISRNRKFHLDWYCFSRS--VLGHPHEALFREKLISGNFVLSSLPKF 91
            MIST  WKTIAKQAIS+NR+FHLDW+C SRS  V+G  +E++  EKLIS  FVLSSLPKF
Sbjct: 1    MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF 60

Query: 92   GILEMGIGRNEISSQEDYGSRFCFGSLGARIGLNGSCPKGYSSVAEAVSSTDVDEDASVD 151
            GI E+GIGR+E+ SQEDYGSRFCFGS+G RIGLNGS PKGYSSVAEAVSSTDVDED+S+D
Sbjct: 61   GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSID 120

Query: 152  DEIQELLQEMSKEEKRQVEYRRRRLKMAKGMGQGKYQMLKRRQVAIETEAWEQAVKEYKE 211
            +EIQELLQEM KEEKRQV+ RRRRLK  KGMG+ KYQMLKRRQVAIETEAW+QAVKEYKE
Sbjct: 121  EEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 180

Query: 212  LLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISKEQELIREGKNRTAYAPYFDQLPADMM 271
            LLMDMC+QKLAPNLPYMKSLFLGWFEPL DAISKEQELIR GKNR AYAPYFDQL ADMM
Sbjct: 181  LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 240

Query: 272  SVITMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDE 331
            SV+TMHKL+GLLMMGHEHGNARVVQAAC IGDAIEQEVRIH+FLEKMKKK+H+KDNEN++
Sbjct: 241  SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 300

Query: 332  KPDSQIKEQERLRKKVTNLIKKQKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQT 391
            KPDSQ+KEQE LRKKVTNLIKKQKLPAVR IVKG DDSKPWG DAKAKVGSRLIELLTQT
Sbjct: 301  KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQT 360

Query: 392  AYIQPPADQLADGPPDIRPAFRHSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTARHM 451
            AYIQPP DQLADGPPDIRPAFRHSFR VMK+A KNSSRR GVIECDPLV+ GLERTARHM
Sbjct: 361  AYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHM 420

Query: 452  VIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTL 511
            VIPYMPMLVPPVNWTGYDKGGHIFLPSF+MRT GA QQR+AVKRTPKQQLTPVFEALDTL
Sbjct: 421  VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 480

Query: 512  GNTKWRINKKILSVVDRIWTSGGRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKK 571
            GNTKWRINKKILS+VDRIWTSGGRLADLVD+DD+PLPEKPDSEDETLLRKWKWKVKSVKK
Sbjct: 481  GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 540

Query: 572  ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 631
            ENMERHSQRCDIELKLAVARKMKDEEGFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILE
Sbjct: 541  ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILE 600

Query: 632  FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWW 691
            FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRM FI+NH+EDIFDSADRPLEGRRWW
Sbjct: 601  FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWW 660

Query: 692  LNAEDPFQFLAACMNLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 751
            LNAEDPFQFLA CMNLTEALR+SSPET ISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN
Sbjct: 661  LNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 720

Query: 752  LVVREKPADVYSGIAARVLEIMRRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVY 811
            L VREKPADVYSGIAARVLEI+R+DAQ+DP TFPDALRAKTLIDQVDRKLVKQTVMTSVY
Sbjct: 721  LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 780

Query: 812  GVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCA 871
            GVTYIGAR+QIKRRLKERA ISDD+ELFGC+CYAAKTTLTALGEMFEAARGIMSWLGDCA
Sbjct: 781  GVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 840

Query: 872  KIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPN 931
            KIIASENQPVRWTTPLGLPVVQPYRKLG+H++KTSLQ+LTLQ+ETDKVL KRQRTAFPPN
Sbjct: 841  KIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPN 900

Query: 932  FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 991
            FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN
Sbjct: 901  FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 960

Query: 992  LLEGFQRSFPTLDFPPLPERGEFDLKEVLESPYFFN 1024
            LLEGFQ+SFP LDFPPLPERGE DLKEVLESPYFFN
Sbjct: 961  LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996

[Close]

BLAST of Lcy09g003050 vs. TAIR 10
Match: AT5G15700.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 1323.5 bits (3424), Expect = 0.0e+00
Identity = 685/1034 (66.25%), Postives = 813/1034 (78.63%), Query Frame = 0


Query: 1    MSFCQCSLSL---TSKIDHSLLLQKPTNSHQNP--SMISTWKTIAKQAISRNRKFHLDWY 60
            MS  Q  L L   T   DH + L KP  S  NP       W+ IAKQAISR+    L+  
Sbjct: 1    MSSAQTPLFLANQTKVFDHLIPLHKPFISSPNPVSQSFPMWRNIAKQAISRSAA-RLNVS 60

Query: 61   CFSRSVLGHPHEALFREKLISGNFVLSSLPKFG---ILEMGIGRNEISSQEDYGSRFCFG 120
              +R +L    E++F  K +S  F +   P  G       GI R E  S+    S  C  
Sbjct: 61   SQTRGLLVSSPESIF-SKNLSFRFPVLGSPCHGKGFRCLSGITRREEFSK----SERC-- 120

Query: 121  SLGARIGLNGSCPKGYSSVA-EAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRR 180
                   L+G+  +GY+SVA E V STDV+E+  VD    ELL+EM KE+KR+  +R  R
Sbjct: 121  -------LSGTLARGYTSVAEEEVLSTDVEEEPEVD----ELLKEMKKEKKRE-SHRSWR 180

Query: 181  LKMAK--GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFL 240
            +K     GMG+ K+Q L RRQV IETE WE+A  EY ELL DMC+QKLAPNLPY+KSLFL
Sbjct: 181  MKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFL 240

Query: 241  GWFEPLHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNAR 300
            GWFEPL DAI+K+QEL R GK++  YA Y DQLPAD +SVITMHKLMG LM G ++G  +
Sbjct: 241  GWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGGDNGCVK 300

Query: 301  VVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKK 360
            VV AAC +GDAIEQE+RI  FL+K KK   N+++   E  ++ +KEQ++LRKKV  LIKK
Sbjct: 301  VVHAACTVGDAIEQEIRICTFLDKKKKGDDNEESGGVEN-ETSMKEQDKLRKKVNELIKK 360

Query: 361  QKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFR 420
            QKL AVR+I++  D +KPW  D +AKVGSRLIELL +TAYIQ PADQ  +  PD+RPAF 
Sbjct: 361  QKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFV 420

Query: 421  HSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGH 480
            H+F+  + +   NS R+ GVIECDPLV KGLE++ R+ V+PYMPMLVPP+ W+GYDKG +
Sbjct: 421  HTFK--VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAY 480

Query: 481  IFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSG 540
            +FL S++M+THGAKQQR+A+K  PK QL PVFEALDTLG+TKWR+NK++L+VVDRIW+SG
Sbjct: 481  LFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSG 540

Query: 541  GRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKM 600
            G +AD+VD+ D+PLPEKPD+EDE +L+KWKW+VKS KK N ERHSQRCD ELKL+VARKM
Sbjct: 541  GCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKM 600

Query: 601  KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANL 660
            KDEE FYYPHN+DFRGRAYPM P+LNHLGSDLCRG+LEFAEGRP+  SGLRWLKIHLANL
Sbjct: 601  KDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANL 660

Query: 661  FAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRS 720
            +AGGVDKLS DGR+AF ENHL+DIFDSADRPLEG RWWL AEDPFQ LA C++LTEALRS
Sbjct: 661  YAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRS 720

Query: 721  SSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIM 780
             SPET +SHIPIHQDGSCNGLQHYAALGRD LGA AVNLV  EKPADVYSGIA RVL+IM
Sbjct: 721  PSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIM 780

Query: 781  RRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAIS 840
            RRDA +DP  FP+ALRA+ L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER+   
Sbjct: 781  RRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFG 840

Query: 841  DDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQ 900
            D+ E+FG +CYAAK TL A+ EMF+AAR IM W G+CAKIIASEN+ VRWTTPLGLPVVQ
Sbjct: 841  DEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQ 900

Query: 901  PYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL 960
            PY ++G  L+KTSLQ L+LQ ETD+V+ +RQRTAFPPNF+HSLDGSHMMMTAVACK+AG+
Sbjct: 901  PYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGV 960

Query: 961  NFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGE 1020
             FAGVHDS+WTHACDVD++N ILREKFVELY  PILENLLE F++SFP LDFPPLPERG+
Sbjct: 961  CFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGD 1011

Query: 1021 FDLKEVLESPYFFN 1024
             DLK VL+SPYFFN
Sbjct: 1021 LDLKVVLDSPYFFN 1011

[Close]

BLAST of Lcy09g003050 vs. TAIR 10
Match: AT5G15700.2 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 1306.2 bits (3379), Expect = 0.0e+00
Identity = 677/1024 (66.11%), Postives = 804/1024 (78.52%), Query Frame = 0


Query: 1    MSFCQCSLSL---TSKIDHSLLLQKPTNSHQNP--SMISTWKTIAKQAISRNRKFHLDWY 60
            MS  Q  L L   T   DH + L KP  S  NP       W+ IAKQAISR+    L+  
Sbjct: 1    MSSAQTPLFLANQTKVFDHLIPLHKPFISSPNPVSQSFPMWRNIAKQAISRSAA-RLNVS 60

Query: 61   CFSRSVLGHPHEALFREKLISGNFVLSSLPKFG---ILEMGIGRNEISSQEDYGSRFCFG 120
              +R +L    E++F  K +S  F +   P  G       GI R E  S+    S  C  
Sbjct: 61   SQTRGLLVSSPESIF-SKNLSFRFPVLGSPCHGKGFRCLSGITRREEFSK----SERC-- 120

Query: 121  SLGARIGLNGSCPKGYSSVA-EAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRR 180
                   L+G+  +GY+SVA E V STDV+E+  VD    ELL+EM KE+KR+  +R  R
Sbjct: 121  -------LSGTLARGYTSVAEEEVLSTDVEEEPEVD----ELLKEMKKEKKRE-SHRSWR 180

Query: 181  LKMAK--GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFL 240
            +K     GMG+ K+Q L RRQV IETE WE+A  EY ELL DMC+QKLAPNLPY+KSLFL
Sbjct: 181  MKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFL 240

Query: 241  GWFEPLHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNAR 300
            GWFEPL DAI+K+QEL R GK++  YA Y DQLPAD +SVITMHKLMG LM G ++G  +
Sbjct: 241  GWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGGDNGCVK 300

Query: 301  VVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKK 360
            VV AAC +GDAIEQE+RI  FL+K KK   N+++   E  ++ +KEQ++LRKKV  LIKK
Sbjct: 301  VVHAACTVGDAIEQEIRICTFLDKKKKGDDNEESGGVEN-ETSMKEQDKLRKKVNELIKK 360

Query: 361  QKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFR 420
            QKL AVR+I++  D +KPW  D +AKVGSRLIELL +TAYIQ PADQ  +  PD+RPAF 
Sbjct: 361  QKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFV 420

Query: 421  HSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGH 480
            H+F+  + +   NS R+ GVIECDPLV KGLE++ R+ V+PYMPMLVPP+ W+GYDKG +
Sbjct: 421  HTFK--VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAY 480

Query: 481  IFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSG 540
            +FL S++M+THGAKQQR+A+K  PK QL PVFEALDTLG+TKWR+NK++L+VVDRIW+SG
Sbjct: 481  LFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSG 540

Query: 541  GRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKM 600
            G +AD+VD+ D+PLPEKPD+EDE +L+KWKW+VKS KK N ERHSQRCD ELKL+VARKM
Sbjct: 541  GCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKM 600

Query: 601  KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANL 660
            KDEE FYYPHN+DFRGRAYPM P+LNHLGSDLCRG+LEFAEGRP+  SGLRWLKIHLANL
Sbjct: 601  KDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANL 660

Query: 661  FAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRS 720
            +AGGVDKLS DGR+AF ENHL+DIFDSADRPLEG RWWL AEDPFQ LA C++LTEALRS
Sbjct: 661  YAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRS 720

Query: 721  SSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIM 780
             SPET +SHIPIHQDGSCNGLQHYAALGRD LGA AVNLV  EKPADVYSGIA RVL+IM
Sbjct: 721  PSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIM 780

Query: 781  RRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAIS 840
            RRDA +DP  FP+ALRA+ L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER+   
Sbjct: 781  RRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFG 840

Query: 841  DDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQ 900
            D+ E+FG +CYAAK TL A+ EMF+AAR IM W G+CAKIIASEN+ VRWTTPLGLPVVQ
Sbjct: 841  DEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQ 900

Query: 901  PYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL 960
            PY ++G  L+KTSLQ L+LQ ETD+V+ +RQRTAFPPNF+HSLDGSHMMMTAVACK+AG+
Sbjct: 901  PYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGV 960

Query: 961  NFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGE 1014
             FAGVHDS+WTHACDVD++N ILREKFVELY  PILENLLE F++SFP LDFPPLPERG+
Sbjct: 961  CFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGD 1001

[Close]

BLAST of Lcy09g003050 vs. TAIR 10
Match: AT1G68990.1 (male gametophyte defective 3 )

HSP 1 Score: 1271.5 bits (3289), Expect = 0.0e+00
Identity = 621/907 (68.47%), Postives = 743/907 (81.92%), Query Frame = 0


Query: 126  KGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRL----KMAKGMGQG 185
            +GY++ A+A+ STD ++++S  DE+ EL+ EM KE +R  +  R       ++  GMG  
Sbjct: 71   EGYATAAQAIDSTDPEDESSGSDEVNELITEMEKETERIRKKARLAAIPPKRVIAGMGAQ 130

Query: 186  KYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISK 245
            K+ MLK+RQV +ETE WE+A +E +E+L DMC+QKLAPNLPYMKSLFLGWFEP+ +AI  
Sbjct: 131  KFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQD 190

Query: 246  EQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEH-GNARVVQAACVIGDA 305
            + +  +  K +  YAP+ +QLPAD M+VITMHK+MGLLM   E  G  ++V AA  IG+A
Sbjct: 191  DLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGEA 250

Query: 306  IEQEVRIHKFLEKMKKKRHNKDNENDE----KPDSQIKEQERLRKKVTNLIKKQKLPAVR 365
            +EQEVRI+ FL+K  KK       N E      +   KE E+ RK+VT L++K KL  V+
Sbjct: 251  VEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQVK 310

Query: 366  QIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVM 425
             +V+  D  KPWGQ+A+ KVG+RLI+LL + AYIQPPA+Q  DGPPDIRPAF+ +FRTV 
Sbjct: 311  ALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTVT 370

Query: 426  KQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFV 485
             +  K +SRR G IECDPLV+KGL+++ARHMVIPY+PML+PP NWTGYD+G H FLPS+V
Sbjct: 371  LENTK-TSRRYGCIECDPLVLKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYV 430

Query: 486  MRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLV 545
            MRTHGAKQQR  +KRTPK+QL PV+EALDTLGNTKW+INKK+LS+VDRIW +GGR+  LV
Sbjct: 431  MRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANGGRIGGLV 490

Query: 546  DQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFY 605
            D++D+P+PE+P+ ED+   + W+W+ K   K+N ERHSQRCDIELKL VARKMKDEEGFY
Sbjct: 491  DREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKMKDEEGFY 550

Query: 606  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 665
            YPHN+DFRGRAYP+HPYLNHLGSDLCRGILEF EG+PL KSGLRWLKIH+ANL+AGGVDK
Sbjct: 551  YPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVDK 610

Query: 666  LSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFI 725
            L+++ R+AF E+HLEDIFDS+DRPLEG+RWWLNAEDPFQ LAAC+NL+EALRS  PE  I
Sbjct: 611  LAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPEAAI 670

Query: 726  SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKD 785
            SHIPIHQDGSCNGLQHYAALGRDKLGA AVNLV  EKPADVY+ IAARVL+IM++DA++D
Sbjct: 671  SHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIMQQDAEED 730

Query: 786  PATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFG 845
            P TFP+A  AK ++DQVDRKLVKQTVMTSVYGVTY GARDQIK+RLKER    DDS  F 
Sbjct: 731  PETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSLTFH 790

Query: 846  CSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 905
             SCYAAK TL AL EMFEAAR I SW GDCAKIIASEN  V WTTPLGLPVVQPYRK GR
Sbjct: 791  ASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQPYRKPGR 850

Query: 906  HLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 965
            HL+KT+LQ+LTL RETDKV+A+RQ TAF PNF+HSLDGSHMMMTAVAC +AGL+FAGVHD
Sbjct: 851  HLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGLSFAGVHD 910

Query: 966  SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVL 1024
            S+WTHACDVD MN ILREKFVELYE PILENLLE FQ+SFP + FPPLPERG+FDL++VL
Sbjct: 911  SFWTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGDFDLRKVL 970

[Close]

BLAST of Lcy09g003050 vs. TAIR 10
Match: AT1G68990.2 (male gametophyte defective 3 )

HSP 1 Score: 1264.6 bits (3271), Expect = 0.0e+00
Identity = 621/914 (67.94%), Postives = 743/914 (81.29%), Query Frame = 0


Query: 126  KGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRL----KMAKGMGQG 185
            +GY++ A+A+ STD ++++S  DE+ EL+ EM KE +R  +  R       ++  GMG  
Sbjct: 71   EGYATAAQAIDSTDPEDESSGSDEVNELITEMEKETERIRKKARLAAIPPKRVIAGMGAQ 130

Query: 186  KYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISK 245
            K+ MLK+RQV +ETE WE+A +E +E+L DMC+QKLAPNLPYMKSLFLGWFEP+ +AI  
Sbjct: 131  KFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQD 190

Query: 246  EQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEH-GNARVVQAACVIGDA 305
            + +  +  K +  YAP+ +QLPAD M+VITMHK+MGLLM   E  G  ++V AA  IG+A
Sbjct: 191  DLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGEA 250

Query: 306  IEQEVRIHKFLEKMKKKRHNKDNENDE----KPDSQIKEQERLRKKVTNLIKKQKLPAVR 365
            +EQEVRI+ FL+K  KK       N E      +   KE E+ RK+VT L++K KL  V+
Sbjct: 251  VEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQVK 310

Query: 366  QIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVM 425
             +V+  D  KPWGQ+A+ KVG+RLI+LL + AYIQPPA+Q  DGPPDIRPAF+ +FRTV 
Sbjct: 311  ALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTVT 370

Query: 426  KQAIKNSSRRCGVIECDPLVIKGLERT-------ARHMVIPYMPMLVPPVNWTGYDKGGH 485
             +  K +SRR G IECDPLV+KGL+++       ARHMVIPY+PML+PP NWTGYD+G H
Sbjct: 371  LENTK-TSRRYGCIECDPLVLKGLDKSVSRIVDYARHMVIPYLPMLIPPQNWTGYDQGAH 430

Query: 486  IFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSG 545
             FLPS+VMRTHGAKQQR  +KRTPK+QL PV+EALDTLGNTKW+INKK+LS+VDRIW +G
Sbjct: 431  FFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANG 490

Query: 546  GRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKM 605
            GR+  LVD++D+P+PE+P+ ED+   + W+W+ K   K+N ERHSQRCDIELKL VARKM
Sbjct: 491  GRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKM 550

Query: 606  KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANL 665
            KDEEGFYYPHN+DFRGRAYP+HPYLNHLGSDLCRGILEF EG+PL KSGLRWLKIH+ANL
Sbjct: 551  KDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANL 610

Query: 666  FAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRS 725
            +AGGVDKL+++ R+AF E+HLEDIFDS+DRPLEG+RWWLNAEDPFQ LAAC+NL+EALRS
Sbjct: 611  YAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRS 670

Query: 726  SSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIM 785
              PE  ISHIPIHQDGSCNGLQHYAALGRDKLGA AVNLV  EKPADVY+ IAARVL+IM
Sbjct: 671  PFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIM 730

Query: 786  RRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAIS 845
            ++DA++DP TFP+A  AK ++DQVDRKLVKQTVMTSVYGVTY GARDQIK+RLKER    
Sbjct: 731  QQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFE 790

Query: 846  DDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQ 905
            DDS  F  SCYAAK TL AL EMFEAAR I SW GDCAKIIASEN  V WTTPLGLPVVQ
Sbjct: 791  DDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQ 850

Query: 906  PYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL 965
            PYRK GRHL+KT+LQ+LTL RETDKV+A+RQ TAF PNF+HSLDGSHMMMTAVAC +AGL
Sbjct: 851  PYRKPGRHLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGL 910

Query: 966  NFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGE 1024
            +FAGVHDS+WTHACDVD MN ILREKFVELYE PILENLLE FQ+SFP + FPPLPERG+
Sbjct: 911  SFAGVHDSFWTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGD 970

[Close]

BLAST of Lcy09g003050 vs. TAIR 10
Match: AT2G24120.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 561/850 (66.00%), Postives = 685/850 (80.59%), Query Frame = 0


Query: 176  KGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPL 235
            K + + K+  L+RRQV  ETEAWE+ V EY++L  +MC++ LAPNLPY+K +FLGWF+PL
Sbjct: 152  KDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPL 211

Query: 236  HDAISKEQEL--IREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQA 295
             D I +EQ+L   +  K R AYAP+ + LPAD M+VI MHK+MGL+M GHE G  +VVQA
Sbjct: 212  KDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCIQVVQA 271

Query: 296  ACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLP 355
            A  IG AIEQEVRIH FL     KR  K+N  D +   ++KE++ LRK+V +LI+++++ 
Sbjct: 272  AVSIGIAIEQEVRIHNFL-----KRTRKNNAGDSQ--EELKEKQLLRKRVNSLIRRKRII 331

Query: 356  AVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFR 415
               ++VK ++ +KPWG+  +AK+GSRL+ELL + AY+QPP  Q  D  P+ RPAFRH F+
Sbjct: 332  DALKVVK-SEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHRFK 391

Query: 416  TVMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLP 475
            TV K       RR GVIECD L++ GL+++A+HM+IPY+PMLVPP  W GYDKGG++FLP
Sbjct: 392  TVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLFLP 451

Query: 476  SFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLA 535
            S++MRTHG+K+Q+DA+K    +    VFEALDTLGNTKWR+N+ IL VV+R+W  GG +A
Sbjct: 452  SYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGNIA 511

Query: 536  DLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEE 595
             LV+++D+P+PEKP SED   L+ WKW  +   K N ERHS RCD+ELKL+VARKMKDEE
Sbjct: 512  GLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKDEE 571

Query: 596  GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGG 655
            GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG LEFAEGRPL KSGL WLKIHLANL+AGG
Sbjct: 572  GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGG 631

Query: 656  VDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPE 715
            V+KLSHD R+AF+ENHL+DI DSA+ P+ G+RWWL AEDPFQ LAAC+ LT+AL+S SP 
Sbjct: 632  VEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPY 691

Query: 716  TFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDA 775
            + ISH+PIHQDGSCNGLQHYAALGRD   AAAVNLV  EKPADVYS I+ RV EIM++D+
Sbjct: 692  SVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDS 751

Query: 776  QKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSE 835
             KDP + P A  AK LI QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+  I+D+  
Sbjct: 752  SKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERM 811

Query: 836  LFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRK 895
            LF  +CY+AK TL ALGE+FEAAR IMSWLGDCAKIIAS+N PVRW TPLGLPVVQPY +
Sbjct: 812  LFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCR 871

Query: 896  LGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAG 955
              RHLI+TSLQ+L LQRE + V  ++QRTAFPPNFVHSLDG+HMMMTAVAC++AGLNFAG
Sbjct: 872  SERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAG 931

Query: 956  VHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLK 1015
            VHDSYWTHACDVD MNRILREKFVELY TPILE+LL+ FQ S+P L FPP+P+RG+FDLK
Sbjct: 932  VHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLK 991

Query: 1016 EVLESPYFFN 1024
            EVL+S YFFN
Sbjct: 992  EVLKSQYFFN 993

The following BLAST results are available for this feature:

BLAST of Lcy09g003050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L6J3	0.0e+00	72.18	DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum...	[more]
Q8VWF8	0.0e+00	72.79	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestr...	[more]
Q8L6J5	0.0e+00	70.99	DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RP...	[more]
Q93Y94	0.0e+00	70.60	DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=...	[more]
Q9LFV6	0.0e+00	66.25	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Arabidopsis thalia...	[more]

BLAST of Lcy09g003050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JUF5	0.0e+00	90.36	DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111489816 PE=3 SV=...	[more]
A0A6J1FHA8	0.0e+00	89.97	DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111445458 PE=3 S...	[more]
A0A6J1C0Y4	0.0e+00	90.96	DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111006419 PE=3 ...	[more]
A0A0A0KXM5	0.0e+00	83.17	DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G642180 PE=3 SV=1	[more]
A0A1S3CBC4	0.0e+00	82.26	DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103498556 PE=3 SV=1	[more]

BLAST of Lcy09g003050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993982.1	0.0e+00	90.36	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Cucurbita maxim...	[more]
XP_022939617.1	0.0e+00	89.97	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Cucurbita mosch...	[more]
XP_022134053.1	0.0e+00	90.96	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Momordica chara...	[more]
XP_038890080.1	0.0e+00	90.56	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like isoform X1 [Beni...	[more]
XP_023551171.1	0.0e+00	90.56	DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like [Cucurbita pepo...	[more]

BLAST of Lcy09g003050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15700.1	0.0e+00	66.25	DNA/RNA polymerases superfamily protein	[more]
AT5G15700.2	0.0e+00	66.11	DNA/RNA polymerases superfamily protein	[more]
AT1G68990.1	0.0e+00	68.47	male gametophyte defective 3	[more]
AT1G68990.2	0.0e+00	67.94	male gametophyte defective 3	[more]
AT2G24120.1	0.0e+00	66.00	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 143..170
None	No IPR available	GENE3D	1.10.287.280		coord: 632..710 e-value: 3.8E-27 score: 95.8
None	No IPR available	GENE3D	1.10.150.20		coord: 741..930 e-value: 1.9E-62 score: 212.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..336
None	No IPR available	PANTHER	PTHR10102:SF7	DNA-DIRECTED RNA POLYMERASE	coord: 36..1023
IPR029262	DNA-directed RNA polymerase, N-terminal	SMART	SM01311	RPOL_N_2	coord: 188..509 e-value: 1.8E-135 score: 466.0
IPR029262	DNA-directed RNA polymerase, N-terminal	PFAM	PF14700	RPOL_N	coord: 189..509 e-value: 3.4E-84 score: 283.1
IPR024075	DNA-directed RNA polymerase, helix hairpin domain superfamily	GENE3D	1.10.287.260		coord: 510..592 e-value: 5.5E-13 score: 51.1
IPR037159	DNA-directed RNA polymerase, N-terminal domain superfamily	GENE3D	1.10.1320.10		coord: 147..509 e-value: 3.7E-77 score: 261.6
IPR002092	DNA-directed RNA polymerase, phage-type	PFAM	PF00940	RNA_pol	coord: 632..1023 e-value: 7.0E-158 score: 525.9
IPR002092	DNA-directed RNA polymerase, phage-type	PANTHER	PTHR10102	DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL	coord: 36..1023
IPR002092	DNA-directed RNA polymerase, phage-type	PROSITE	PS00489	RNA_POL_PHAGE_2	coord: 793..807
IPR002092	DNA-directed RNA polymerase, phage-type	PROSITE	PS00900	RNA_POL_PHAGE_1	coord: 720..731
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 174..1023

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g003050.1	Lcy09g003050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006390	mitochondrial transcription
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0034245	mitochondrial DNA-directed RNA polymerase complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity