Homology
BLAST of Lcy09g003050 vs. ExPASy Swiss-Prot
Match:
Q8L6J3 (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT2-TOM PE=2 SV=2)
HSP 1 Score: 1482.2 bits (3836), Expect = 0.0e+00
Identity = 755/1046 (72.18%), Postives = 864/1046 (82.60%), Query Frame = 0
Query: 1 MSFCQCSLSLTSKIDHSLLLQKPT-----NSHQNPSMISTWKTIAKQAISRN-RKFHLDW 60
MS + +SLT K++ KPT H +P M W+ I KQ SR +K
Sbjct: 1 MSSTKTPISLTIKLNQ--FTDKPTGLDINRYHNSPIM---WRNIIKQLSSRTPQKLLFSS 60
Query: 61 YCFSRSVLGHPHEALFREK--------LISGNFVL------SSLPKFGILEMGIGRNEIS 120
+ S LG +++F++ + N V+ LP L + +N+++
Sbjct: 61 KNRTYSFLGFGQDSVFKDNTKFRSLIPISCSNIVMGFQNLGEYLPGDEFLSRPLLKNQVN 120
Query: 121 SQEDYGSRFCFGSLGARIGLNGSCPKGYSSVAE--AVSSTDVDEDASVDDEIQELLQEMS 180
S + FC C K Y+SVAE AVSSTD +ED SV DE+QELL E+
Sbjct: 121 SND-----FC-------------CRKSYASVAEAVAVSSTDAEEDVSVVDEVQELLTELK 180
Query: 181 KEEKRQVEYRRRRLKM-AKGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKL 240
KEEK+Q +RRR+ +M GMG KYQ LKRRQV +ETEAWEQA KEYKELL DMC+QKL
Sbjct: 181 KEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKL 240
Query: 241 APNLPYMKSLFLGWFEPLHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMG 300
APNLPY+KSLFLGWFEPL D I++EQEL +GK++ AYA Y QLPADMM+VITMHKLMG
Sbjct: 241 APNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMG 300
Query: 301 LLMMGHEHGNARVVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQE 360
LLM G +HG ARVVQAA VIGDAIEQEVRIH FLEK KK++ KD + E + +EQE
Sbjct: 301 LLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK-EDGEHVTQEQE 360
Query: 361 RLRKKVTNLIKKQKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQL 420
+LRKKVTNL+KKQKL AV QIV+ DDSKPWGQDAKAKVGSRLIELL QTAYIQPPA+QL
Sbjct: 361 KLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQL 420
Query: 421 ADGPPDIRPAFRHSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVP 480
A PPDIRPAF HS RTV K+ K++SRR G+I+CD LV KGLERTARHMVIPYMPMLVP
Sbjct: 421 AVDPPDIRPAFLHSVRTVAKET-KSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVP 480
Query: 481 PVNWTGYDKGGHIFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKK 540
PV WTGYDKGGH++LPS+VMRTHGA+QQR+AVKR + QL PVFEALDTLG+TKWRINK+
Sbjct: 481 PVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKR 540
Query: 541 ILSVVDRIWTSGGRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRC 600
+LSV+DRIW GGRLADLVD+DD PLPE+PD+EDE L KW+WKVKSVKKEN ERHSQRC
Sbjct: 541 VLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRC 600
Query: 601 DIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKS 660
DIELKLAVARKMKDEEGF+YPHN+DFRGRAYPMHP+LNHLGSD+CRG+L FAEGRPL +S
Sbjct: 601 DIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGES 660
Query: 661 GLRWLKIHLANLFAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFL 720
GLRWLKIHLANLFAGGV+KLS +GR+AF ENH++DIFDSAD+PLEGRRWWLNAEDPFQ L
Sbjct: 661 GLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCL 720
Query: 721 AACMNLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADV 780
A C+NL+EA+RSSSPET ISHIP+HQDGSCNGLQHYAALGRD+LGAAAVNLV EKPADV
Sbjct: 721 AVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADV 780
Query: 781 YSGIAARVLEIMRRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQ 840
YSGIAARVL+IM+RDAQ+DPA FPDA+RA+ L++QVDRKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 781 YSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQ 840
Query: 841 IKRRLKERAAISDDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPV 900
IKRRLKER AI+DDSELFG +CYAAK TLTALGEMFEAAR IM+WLG+CAKIIASEN+PV
Sbjct: 841 IKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPV 900
Query: 901 RWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHM 960
RWTTPLGLPVVQPYRK+GRHLIKTSLQILTLQ+ET+KV+ KRQRTAFPPNF+HSLDGSHM
Sbjct: 901 RWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHM 960
Query: 961 MMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFP 1020
MMTAVAC++AGLNFAGVHDSYWTHACDVD++NRILREKFVELYETPILE LLE FQ S+P
Sbjct: 961 MMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYP 1020
Query: 1021 TLDFPPLPERGEFDLKEVLESPYFFN 1024
TL FPPLPERG+FDL++VLESPYFFN
Sbjct: 1021 TLLFPPLPERGDFDLRDVLESPYFFN 1021
BLAST of Lcy09g003050 vs. ExPASy Swiss-Prot
Match:
Q8VWF8 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT2 PE=2 SV=2)
HSP 1 Score: 1481.1 bits (3833), Expect = 0.0e+00
Identity = 749/1029 (72.79%), Postives = 860/1029 (83.58%), Query Frame = 0
Query: 1 MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMIS--TWKTIAKQAISRN-RKFHLDWYCF 60
MS + +SLT K++ KPT NP S W+ I KQ SR +K
Sbjct: 1 MSSTKTPISLTIKLNQ--FTDKPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKNR 60
Query: 61 SRSVLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGAR 120
+ S LG +++F++ + + S + +G E +++ SR + +
Sbjct: 61 TYSFLGFGQDSIFKDNTKFRSLIPISCSNIVMGFQNLG--EYLPGDEFLSR---PLIKNQ 120
Query: 121 IGLNGSCPKGYSSVAE--AVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKM- 180
+ N C K Y+SVAE AVSSTD +ED SV DE+ ELL E+ KEEK+Q +RRR+ +M
Sbjct: 121 VNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRML 180
Query: 181 AKGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEP 240
GMG KYQ LKRRQV +ETEAWEQA KEYKELL DMC+QKLAPNLPY+KSLFLGWFEP
Sbjct: 181 TSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEP 240
Query: 241 LHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAA 300
L D I++EQEL +GK++ AYA YF QLPADMM+VITMHKLMGLLM G +HG ARVVQAA
Sbjct: 241 LRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAA 300
Query: 301 CVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPA 360
VIGDAIEQEVRIH FLEK KK++ KD + E + +EQE+LRKKVTNL+KKQKL A
Sbjct: 301 LVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK-EDGEHVTQEQEKLRKKVTNLMKKQKLRA 360
Query: 361 VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT 420
V QIV+ DDSKPWGQDA+AKVGSRLI+LL QTAYIQPPA+QLA PPDIRPAF HS RT
Sbjct: 361 VGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRT 420
Query: 421 VMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS 480
V K+ K++SRR G+I+CD LV KGLERTARHMVIPYMPMLVPPV WTGYDKGGH++LPS
Sbjct: 421 VAKET-KSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPS 480
Query: 481 FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLAD 540
+VMRTHGA+QQR+AVKR + QL PVFEALDTLGNTKWRINK++LSVVDRIW GGRLAD
Sbjct: 481 YVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLAD 540
Query: 541 LVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG 600
LVD+DD PLPE+PD+EDE L KW+WKVKSVKKEN ERHSQRCDIELKLAVARKMKDEE
Sbjct: 541 LVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEES 600
Query: 601 FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGV 660
F+YPHN+DFRGRAYPMHP+LNHLGSD+CRG+LEFAEGRPL +SGLRWLKIHLANLFAGGV
Sbjct: 601 FFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGV 660
Query: 661 DKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPET 720
+KLS +GR+ F ENH++DIFDS+D+PLEGRRWWLNAEDPFQ LA C+NL+EA+RSSSPET
Sbjct: 661 EKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPET 720
Query: 721 FISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQ 780
+SHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLV EKPADVYSGIAARVL+IM+RDAQ
Sbjct: 721 SVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQ 780
Query: 781 KDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSEL 840
+DPA FPDA+RA+ L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AI+DDSEL
Sbjct: 781 RDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSEL 840
Query: 841 FGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKL 900
FG +CYAAK TLTALGEMFEAAR IM+WLG+CAKIIASEN+PVRWTTPLGLPVVQPYRK+
Sbjct: 841 FGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKI 900
Query: 901 GRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGV 960
GRHLIKTSLQILTLQRET+KV+ KRQRTAFPPNF+HSLDGSHMMMTAVAC++AGLNFAGV
Sbjct: 901 GRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGV 960
Query: 961 HDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKE 1020
HDSYWTHACDVD++NRILREKFVELYE PILE LLE FQ S+PTL FPPLPERG+FD+++
Sbjct: 961 HDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRD 1020
Query: 1021 VLESPYFFN 1024
VLESPYFFN
Sbjct: 1021 VLESPYFFN 1020
BLAST of Lcy09g003050 vs. ExPASy Swiss-Prot
Match:
Q8L6J5 (DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT1-TOM PE=2 SV=2)
HSP 1 Score: 1409.8 bits (3648), Expect = 0.0e+00
Identity = 722/1017 (70.99%), Postives = 818/1017 (80.43%), Query Frame = 0
Query: 36 WKTIAKQAISRN-RKFH----LDWYCFSRSV-LGHPHEALFREKLISGNFVLSSLPKF-- 95
W+ I+K A SR R H L + +S S P + L E N LS F
Sbjct: 2 WRYISKHAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTHPNLGLSQNSIFSR 61
Query: 96 ---------GILE-------MGIGRNEISSQEDYGSRFC----FGSLGARIGLNGSCPKG 155
GI E +G+ +N S R C GSLG +
Sbjct: 62 ISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRL--------RS 121
Query: 156 YSSVAEAVSSTDVDEDASVDDEIQELLQEMSKE-EKRQVEYRRRRLKMAKGMGQGKYQML 215
Y S AEA+ ST +ED DEIQEL++EM KE E + + ++ K GMG GKY L
Sbjct: 122 YGSAAEAIVSTS-EEDI---DEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFL 181
Query: 216 KRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISKEQELI 275
+RRQ+ +ETEAWE+A KEY+ELLMDMC+QKLAPNLPYMKSLFLGWFEPL DAI+ EQ+L
Sbjct: 182 RRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLC 241
Query: 276 REGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVR 335
EGKNR AYAP+FDQLPA+MM+VITMHKLMGLLM G G+ARVVQAA IG+AIE E R
Sbjct: 242 DEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEAR 301
Query: 336 IHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVRQIVKGADDSK 395
IH+FLEK KK + + +E P +KE+ERLRKKV L+KKQKL VR+IVK DD K
Sbjct: 302 IHRFLEKTKKS-NALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEK 361
Query: 396 PWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVMKQAIKNSSRR 455
PWGQD KVG RLI++L +TAYIQPP DQL DGPPDIRPAF H+ +TV SRR
Sbjct: 362 PWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV---ETMKGSRR 421
Query: 456 CGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQR 515
GVI+CDPLV KGL++TARHMVIPYMPMLVPP +W GYDKGG++FLPS++MRTHGAKQQR
Sbjct: 422 YGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQR 481
Query: 516 DAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLVDQDDIPLPEK 575
+AVKR PK+QL PVF+ALDTLGNTKWR+N+K+L +VDRIW SGGRLADLVD++D+PLPE
Sbjct: 482 EAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEA 541
Query: 576 PDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGR 635
PD+EDE +RKWKWKVK VKKEN ERHSQRCDIELKLAVARKMKDE+GFYYPHNLDFRGR
Sbjct: 542 PDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGR 601
Query: 636 AYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMAFI 695
AYPMHPYLNHLGSDLCRGILEFAEGRPL SGLRWLKIHLAN++ GGVDKLS++GR+AF
Sbjct: 602 AYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFS 661
Query: 696 ENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFISHIPIHQDGS 755
ENHLEDIFDSA+RPLEG+RWWL AEDPFQ LA C+N+ EALRS SPET IS++PIHQDGS
Sbjct: 662 ENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGS 721
Query: 756 CNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKDPATFPDALRA 815
CNGLQHYAALGRDKLGAAAVNLV +KPADVYSGIAARVL+IM+RDA KDPA P+ +RA
Sbjct: 722 CNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRA 781
Query: 816 KTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKTTL 875
+ LI+QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER I DD+ELF +CYAAKTTL
Sbjct: 782 RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTL 841
Query: 876 TALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL 935
TALGEMFEAAR IMSWLGDCAKIIA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL
Sbjct: 842 TALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL 901
Query: 936 TLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVD 995
TLQRETDKV+ KRQRTAFPPNFVHSLDGSHMMMTA+ACK++GL+FAGVHDSYWTHACDVD
Sbjct: 902 TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVD 961
Query: 996 EMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVLESPYFFN 1024
+MN+ILREKFVELY+ PILENLLE FQ+SFP L FPPLPERG+FDL+EVLESPYFFN
Sbjct: 962 QMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
BLAST of Lcy09g003050 vs. ExPASy Swiss-Prot
Match:
Q93Y94 (DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT1 PE=2 SV=1)
HSP 1 Score: 1402.5 bits (3629), Expect = 0.0e+00
Identity = 718/1017 (70.60%), Postives = 822/1017 (80.83%), Query Frame = 0
Query: 36 WKTIAKQAISRN-RKFH----LDWYCFSRSV-LGHPHEALFREKLISGNFVLSSLPKF-- 95
W+ I+KQA SR R H L + +S S P + L E + N LS F
Sbjct: 2 WRYISKQAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNSIFSR 61
Query: 96 ---------GILE-------MGIGRNEISSQEDYGSRFC----FGSLGARIGLNGSCPKG 155
GI E +G+ +N + S R C GSLG +
Sbjct: 62 ISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFL--------RS 121
Query: 156 YSSVAEAVSSTDVDEDASVDDEIQELLQEMSKE-EKRQVEYRRRRLKMAKGMGQGKYQML 215
Y S AEA++ST +ED DEIQEL++EM+KE E + + ++ K GMG GKY +L
Sbjct: 122 YGSAAEAIASTS-EEDI---DEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLL 181
Query: 216 KRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISKEQELI 275
+RRQ+ +ETEAWE+A KEY+ELLMDMC+QKLAPNLPYMKSLFLGWFEPL DAI+ EQ+L
Sbjct: 182 RRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLC 241
Query: 276 REGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVR 335
EGKNR AYAP+FDQLPA+MM+VITMHKLMGLLM G G+ARVVQAA IG+AIE E R
Sbjct: 242 DEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEAR 301
Query: 336 IHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVRQIVKGADDSK 395
IH+FLEK KK + + ++ P +KE+ER+RKKV L+KKQKL VR+IVK DD K
Sbjct: 302 IHRFLEKTKKS-NALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEK 361
Query: 396 PWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVMKQAIKNSSRR 455
PWGQD KVG RLI++L +TAYIQPP DQL D PPDIRPAF H+ +TV SRR
Sbjct: 362 PWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV---ETMKGSRR 421
Query: 456 CGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQR 515
GVI+CDPLV KGL++TARHMVIPYMPMLVPP +W GYDKG ++FLPS++MRTHGAKQQR
Sbjct: 422 YGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQR 481
Query: 516 DAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLVDQDDIPLPEK 575
+AVKR PK+QL PVF+ALDTLGNTKWR+N+K+L +VDRIW SGGRLADLVD++D+PLPE+
Sbjct: 482 EAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEE 541
Query: 576 PDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGR 635
PD+EDE +RKWKWKVK VKKEN ERHSQRCDIELKLAVARKMKDE+GFYYPHNLDFRGR
Sbjct: 542 PDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGR 601
Query: 636 AYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMAFI 695
AYPMHPYLNHLGSDLCRGILEFAEGRPL KSGLRWLKIHLAN++ GGVDKLS++GR+AF
Sbjct: 602 AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFS 661
Query: 696 ENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFISHIPIHQDGS 755
ENH+EDIFDSA+RPLEG+RWWL AEDPFQ LA C+N+ EALRS SPET IS++PIHQDGS
Sbjct: 662 ENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGS 721
Query: 756 CNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKDPATFPDALRA 815
CNGLQHYAALGRD LGAAAVNLV +KPADVYSGIAARVL+IM+RDA KDPA P+ +RA
Sbjct: 722 CNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRA 781
Query: 816 KTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKTTL 875
+ LI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER I DD+ELF +CYAAKTTL
Sbjct: 782 RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTL 841
Query: 876 TALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL 935
TALGEMFEAAR IMSWLGDCAKIIA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL
Sbjct: 842 TALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL 901
Query: 936 TLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVD 995
TLQRETDKV+ KRQRTAFPPNFVHSLDGSHMMMTA+ACK++GL+FAGVHDSYWTHA DVD
Sbjct: 902 TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVD 961
Query: 996 EMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVLESPYFFN 1024
+MN+ILREKFVELY+ PILENLLE FQ+SFP L FPPLPERG+FDL+EVLESPYFFN
Sbjct: 962 QMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
BLAST of Lcy09g003050 vs. ExPASy Swiss-Prot
Match:
Q9LFV6 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPOT2 PE=1 SV=1)
HSP 1 Score: 1323.5 bits (3424), Expect = 0.0e+00
Identity = 685/1034 (66.25%), Postives = 813/1034 (78.63%), Query Frame = 0
Query: 1 MSFCQCSLSL---TSKIDHSLLLQKPTNSHQNP--SMISTWKTIAKQAISRNRKFHLDWY 60
MS Q L L T DH + L KP S NP W+ IAKQAISR+ L+
Sbjct: 1 MSSAQTPLFLANQTKVFDHLIPLHKPFISSPNPVSQSFPMWRNIAKQAISRSAA-RLNVS 60
Query: 61 CFSRSVLGHPHEALFREKLISGNFVLSSLPKFG---ILEMGIGRNEISSQEDYGSRFCFG 120
+R +L E++F K +S F + P G GI R E S+ S C
Sbjct: 61 SQTRGLLVSSPESIF-SKNLSFRFPVLGSPCHGKGFRCLSGITRREEFSK----SERC-- 120
Query: 121 SLGARIGLNGSCPKGYSSVA-EAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRR 180
L+G+ +GY+SVA E V STDV+E+ VD ELL+EM KE+KR+ +R R
Sbjct: 121 -------LSGTLARGYTSVAEEEVLSTDVEEEPEVD----ELLKEMKKEKKRE-SHRSWR 180
Query: 181 LKMAK--GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFL 240
+K GMG+ K+Q L RRQV IETE WE+A EY ELL DMC+QKLAPNLPY+KSLFL
Sbjct: 181 MKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFL 240
Query: 241 GWFEPLHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNAR 300
GWFEPL DAI+K+QEL R GK++ YA Y DQLPAD +SVITMHKLMG LM G ++G +
Sbjct: 241 GWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGGDNGCVK 300
Query: 301 VVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKK 360
VV AAC +GDAIEQE+RI FL+K KK N+++ E ++ +KEQ++LRKKV LIKK
Sbjct: 301 VVHAACTVGDAIEQEIRICTFLDKKKKGDDNEESGGVEN-ETSMKEQDKLRKKVNELIKK 360
Query: 361 QKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFR 420
QKL AVR+I++ D +KPW D +AKVGSRLIELL +TAYIQ PADQ + PD+RPAF
Sbjct: 361 QKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFV 420
Query: 421 HSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGH 480
H+F+ + + NS R+ GVIECDPLV KGLE++ R+ V+PYMPMLVPP+ W+GYDKG +
Sbjct: 421 HTFK--VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAY 480
Query: 481 IFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSG 540
+FL S++M+THGAKQQR+A+K PK QL PVFEALDTLG+TKWR+NK++L+VVDRIW+SG
Sbjct: 481 LFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSG 540
Query: 541 GRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKM 600
G +AD+VD+ D+PLPEKPD+EDE +L+KWKW+VKS KK N ERHSQRCD ELKL+VARKM
Sbjct: 541 GCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKM 600
Query: 601 KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANL 660
KDEE FYYPHN+DFRGRAYPM P+LNHLGSDLCRG+LEFAEGRP+ SGLRWLKIHLANL
Sbjct: 601 KDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANL 660
Query: 661 FAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRS 720
+AGGVDKLS DGR+AF ENHL+DIFDSADRPLEG RWWL AEDPFQ LA C++LTEALRS
Sbjct: 661 YAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRS 720
Query: 721 SSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIM 780
SPET +SHIPIHQDGSCNGLQHYAALGRD LGA AVNLV EKPADVYSGIA RVL+IM
Sbjct: 721 PSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIM 780
Query: 781 RRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAIS 840
RRDA +DP FP+ALRA+ L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER+
Sbjct: 781 RRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFG 840
Query: 841 DDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQ 900
D+ E+FG +CYAAK TL A+ EMF+AAR IM W G+CAKIIASEN+ VRWTTPLGLPVVQ
Sbjct: 841 DEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQ 900
Query: 901 PYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL 960
PY ++G L+KTSLQ L+LQ ETD+V+ +RQRTAFPPNF+HSLDGSHMMMTAVACK+AG+
Sbjct: 901 PYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGV 960
Query: 961 NFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGE 1020
FAGVHDS+WTHACDVD++N ILREKFVELY PILENLLE F++SFP LDFPPLPERG+
Sbjct: 961 CFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGD 1011
Query: 1021 FDLKEVLESPYFFN 1024
DLK VL+SPYFFN
Sbjct: 1021 LDLKVVLDSPYFFN 1011
BLAST of Lcy09g003050 vs. ExPASy TrEMBL
Match:
A0A6J1JUF5 (DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111489816 PE=3 SV=1)
HSP 1 Score: 1889.0 bits (4892), Expect = 0.0e+00
Identity = 928/1027 (90.36%), Postives = 981/1027 (95.52%), Query Frame = 0
Query: 1 MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYCFS 60
MSFCQCS +LT K ++ LLLQ+PTN HQNP MIST WKTIAKQAIS+NR+FHLDW+C S
Sbjct: 1 MSFCQCSFNLTGKFENFLLLQQPTNFHQNPPMISTSMWKTIAKQAISKNRQFHLDWHCLS 60
Query: 61 RS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGA 120
RS V+G +E++ REKLIS FVLSSLPKFGI E+GIGR+E+ SQ+DYGSRFCFGS+G
Sbjct: 61 RSHGVMGRLNESIIREKLISDKFVLSSLPKFGISELGIGRSEVLSQDDYGSRFCFGSMGV 120
Query: 121 RIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKMAK 180
RIGLNGSCPKGYSSVAEAVSSTDVDED+S+D+EIQELLQEM KEEKRQV+ RRR LK K
Sbjct: 121 RIGLNGSCPKGYSSVAEAVSSTDVDEDSSIDEEIQELLQEMRKEEKRQVQRRRRGLKRVK 180
Query: 181 GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLH 240
GMG+ KYQMLKRRQVAIETEAW+QAVKEYKELLMDMC+QKLAPNLPYMKSLFLGWFEPL
Sbjct: 181 GMGEEKYQMLKRRQVAIETEAWKQAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 240
Query: 241 DAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACV 300
DAISKEQELIR GKNRTAYAPYFDQL ADMMSV+TMHKLMGLLMMGHEHGNARVVQAACV
Sbjct: 241 DAISKEQELIRIGKNRTAYAPYFDQLSADMMSVVTMHKLMGLLMMGHEHGNARVVQAACV 300
Query: 301 IGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVR 360
IGDAIEQEVRIH+FLEKMKKK+H+KDNEN++KPDSQ+KEQERLRKKVTNLIK QKLPAVR
Sbjct: 301 IGDAIEQEVRIHRFLEKMKKKKHDKDNENNDKPDSQLKEQERLRKKVTNLIKMQKLPAVR 360
Query: 361 QIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVM 420
IVKGADDSKPWG DAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFR VM
Sbjct: 361 HIVKGADDSKPWGPDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRIVM 420
Query: 421 KQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFV 480
K+A KNSSRR GVIECDPLV+KGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSF+
Sbjct: 421 KEANKNSSRRYGVIECDPLVVKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFI 480
Query: 481 MRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLV 540
MRT GA QQR+AVKRTPKQQLTPVFEALDTLGNTKWRINKKILS+VDRIWTSGG LADLV
Sbjct: 481 MRTRGANQQREAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSIVDRIWTSGGCLADLV 540
Query: 541 DQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFY 600
D+DD+PLPEKPDSEDETLLRKWKWKVKSVKKEN+ERHSQRCDIELKLAVARKMKDEEGFY
Sbjct: 541 DRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENVERHSQRCDIELKLAVARKMKDEEGFY 600
Query: 601 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 660
+PHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK
Sbjct: 601 FPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 660
Query: 661 LSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFI 720
LSHDGR+ FI++H+EDIFDSADRPLEGRRWWLNAEDPFQFLA CMNLTEALRSSSPET I
Sbjct: 661 LSHDGRITFIDDHVEDIFDSADRPLEGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETVI 720
Query: 721 SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKD 780
SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL V EKPADVYSGIAARVLEI+R+DAQ+D
Sbjct: 721 SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLTVTEKPADVYSGIAARVLEIVRKDAQRD 780
Query: 781 PATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFG 840
P TFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDD+ELFG
Sbjct: 781 PETFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDTELFG 840
Query: 841 CSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 900
C+CYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR
Sbjct: 841 CACYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 900
Query: 901 HLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 960
HL+KTSLQ+LTLQ+ETDKVL KRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD
Sbjct: 901 HLVKTSLQVLTLQQETDKVLVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 960
Query: 961 SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVL 1020
SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQ+SFP LDFPPLPERGE DLKEVL
Sbjct: 961 SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQQSFPVLDFPPLPERGELDLKEVL 1020
Query: 1021 ESPYFFN 1024
ESPYFFN
Sbjct: 1021 ESPYFFN 1027
BLAST of Lcy09g003050 vs. ExPASy TrEMBL
Match:
A0A6J1FHA8 (DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111445458 PE=3 SV=1)
HSP 1 Score: 1879.0 bits (4866), Expect = 0.0e+00
Identity = 924/1027 (89.97%), Postives = 978/1027 (95.23%), Query Frame = 0
Query: 1 MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYCFS 60
MSFCQCS +LT K ++ LLLQ+PTN HQNP MIST WKTIAKQAIS+NR+FHLDW+C S
Sbjct: 1 MSFCQCSFNLTGKFENFLLLQQPTNFHQNPPMISTSMWKTIAKQAISKNRQFHLDWHCLS 60
Query: 61 RS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGA 120
RS V+G +E++ REKLIS FVLSSLPKFGI E+GIGR+E+ SQEDYGSRFCFGS+G
Sbjct: 61 RSHGVMGRLNESIIREKLISDKFVLSSLPKFGISELGIGRSEVLSQEDYGSRFCFGSMGV 120
Query: 121 RIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKMAK 180
RIGLNGS PKGYSSVAEAVSSTDVDED+S D+EIQELLQEM KEEKRQV+ RRRRLK K
Sbjct: 121 RIGLNGSIPKGYSSVAEAVSSTDVDEDSSSDEEIQELLQEMRKEEKRQVQRRRRRLKWVK 180
Query: 181 GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLH 240
GMG+ KYQMLKRRQVAIETEAW+QAVKEYKELLMDMC+QKLAPNLPYMKSLFLGWFEPL
Sbjct: 181 GMGEQKYQMLKRRQVAIETEAWKQAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 240
Query: 241 DAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACV 300
DAISKEQELIR GKNR AYAPYFDQL ADMMSV+TMHKL+GLLMMGHEHGNARVVQAAC
Sbjct: 241 DAISKEQELIRIGKNRAAYAPYFDQLSADMMSVVTMHKLIGLLMMGHEHGNARVVQAACA 300
Query: 301 IGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVR 360
IGDAIEQEVRIH+FLEKMKKK+H+KDNEN++KPDSQ+KEQE LRKKVTNLIKKQKLPAVR
Sbjct: 301 IGDAIEQEVRIHRFLEKMKKKKHDKDNENNDKPDSQLKEQEWLRKKVTNLIKKQKLPAVR 360
Query: 361 QIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVM 420
IVKGADDSKPWG DAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFR VM
Sbjct: 361 HIVKGADDSKPWGPDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRIVM 420
Query: 421 KQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFV 480
K+A KNSSRR GVIECDPLV+KGLE+TARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSF+
Sbjct: 421 KEANKNSSRRYGVIECDPLVVKGLEKTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFI 480
Query: 481 MRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLV 540
MRT GA QQR+AVKRTPKQQLTPVFEALDTLGNTKWRINKKILS+VDRIWTSGGRLADLV
Sbjct: 481 MRTRGANQQREAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSIVDRIWTSGGRLADLV 540
Query: 541 DQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFY 600
D+DD+PLPEKPDSEDETLLRKWKWKVKSVKKEN+ERHSQRCDIELKLAVA KMKDEEGFY
Sbjct: 541 DRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENVERHSQRCDIELKLAVAHKMKDEEGFY 600
Query: 601 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 660
YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPL KSGLRWLKIHLANLFAGGVDK
Sbjct: 601 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAGGVDK 660
Query: 661 LSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFI 720
LSHDGR+ FI++H+EDIFDSADRPLEGRRWWLNAEDPFQFLA CMNLTEALRSSSPET I
Sbjct: 661 LSHDGRITFIDDHVEDIFDSADRPLEGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETVI 720
Query: 721 SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKD 780
SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL VREKPADVYSGIAARVLEI+R+DAQ+D
Sbjct: 721 SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLAVREKPADVYSGIAARVLEIVRKDAQRD 780
Query: 781 PATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFG 840
P TFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDD+ELFG
Sbjct: 781 PETFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDTELFG 840
Query: 841 CSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 900
C+CYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLG+
Sbjct: 841 CACYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGK 900
Query: 901 HLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 960
HL+KTSLQ+LTLQ+ETDKVL KRQRTAFPPNFVHSLDGSHMMMTAVACK+AGLNFAGVHD
Sbjct: 901 HLVKTSLQVLTLQQETDKVLVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHD 960
Query: 961 SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVL 1020
SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQ+SFP LDFPPLPERGE DLKEVL
Sbjct: 961 SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQQSFPALDFPPLPERGELDLKEVL 1020
Query: 1021 ESPYFFN 1024
ESPYFFN
Sbjct: 1021 ESPYFFN 1027
BLAST of Lcy09g003050 vs. ExPASy TrEMBL
Match:
A0A6J1C0Y4 (DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111006419 PE=3 SV=1)
HSP 1 Score: 1875.5 bits (4857), Expect = 0.0e+00
Identity = 936/1029 (90.96%), Postives = 970/1029 (94.27%), Query Frame = 0
Query: 1 MSFCQCSLSLTSKID--HSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYC 60
MSFCQCS +LTSK D HSL LQKPTN H PSMIST WK IAKQAISRNRKF LDW+
Sbjct: 1 MSFCQCSSNLTSKFDHHHSLPLQKPTNFHLAPSMISTSVWKIIAKQAISRNRKFRLDWHS 60
Query: 61 FSRS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSL 120
FSRS VLG PHE+LF EK +SG+ V SSLPKFG EM IGRNEI SQE YGSRFCFGS+
Sbjct: 61 FSRSHGVLGRPHESLFPEKFMSGSSVFSSLPKFGTWEMDIGRNEILSQEVYGSRFCFGSV 120
Query: 121 GARIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKM 180
G RIGLNG CPKG+SSVAEAVSSTDVDEDASVDDEIQELLQEM+KEEKRQVEYRRRR KM
Sbjct: 121 GTRIGLNGMCPKGFSSVAEAVSSTDVDEDASVDDEIQELLQEMTKEEKRQVEYRRRRQKM 180
Query: 181 AKGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEP 240
AKGMGQGKYQMLKRRQV IETEAWE AVKEYKELLMDMC+QKLAPNLPYMKSLFLGWFEP
Sbjct: 181 AKGMGQGKYQMLKRRQVKIETEAWELAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEP 240
Query: 241 LHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAA 300
L DAI KEQELIREGKNRTAYAPYFD+LPADMMSVITMHKLMGLLMMGHEHGNARVVQAA
Sbjct: 241 LRDAIIKEQELIREGKNRTAYAPYFDRLPADMMSVITMHKLMGLLMMGHEHGNARVVQAA 300
Query: 301 CVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPA 360
CVIGDAIEQE+RIH FLEKMKKK+H+KD EN++KPDS IKEQE+LRKKVTNLIKKQKLPA
Sbjct: 301 CVIGDAIEQEIRIHNFLEKMKKKKHDKDGENNDKPDSLIKEQEKLRKKVTNLIKKQKLPA 360
Query: 361 VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT 420
VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT
Sbjct: 361 VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT 420
Query: 421 VMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS 480
VMK+A KNSSRR GVIECDPLV+KGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS
Sbjct: 421 VMKEANKNSSRRYGVIECDPLVVKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS 480
Query: 481 FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLAD 540
FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINK+ILSVVDRIWT GGRLAD
Sbjct: 481 FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKRILSVVDRIWTGGGRLAD 540
Query: 541 LVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG 600
LVD+DD+PLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG
Sbjct: 541 LVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG 600
Query: 601 FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGV 660
FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGL WLKIHLANLFAGGV
Sbjct: 601 FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLNWLKIHLANLFAGGV 660
Query: 661 DKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPET 720
DKLSHDGRM FIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRS SPET
Sbjct: 661 DKLSHDGRMTFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSFSPET 720
Query: 721 FISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQ 780
FISHIP+HQDGSCNGLQHYAALGRDKLGA AVNLV EKPADVY+GIAARVLEIM+RDAQ
Sbjct: 721 FISHIPVHQDGSCNGLQHYAALGRDKLGATAVNLVTGEKPADVYTGIAARVLEIMQRDAQ 780
Query: 781 KDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSEL 840
+DPA FPDALRAK LIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERA+IS +
Sbjct: 781 RDPAIFPDALRAKRLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERASISXXXXV 840
Query: 841 FGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKL 900
+ + + TLTALGEMFEAARGIM+WLGDCAKIIASENQPVRWTTPLGLPVVQPYR L
Sbjct: 841 MSSNIMSEQITLTALGEMFEAARGIMNWLGDCAKIIASENQPVRWTTPLGLPVVQPYRVL 900
Query: 901 GRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGV 960
GRHLIKTSLQ+LTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL+FAGV
Sbjct: 901 GRHLIKTSLQVLTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLSFAGV 960
Query: 961 HDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKE 1020
HDSYWTHACDVDEMNRILREKFVELYE PILENLLEGFQRSFPTL+FPPLPERGEFDLKE
Sbjct: 961 HDSYWTHACDVDEMNRILREKFVELYEMPILENLLEGFQRSFPTLNFPPLPERGEFDLKE 1020
Query: 1021 VLESPYFFN 1024
VLESPYFFN
Sbjct: 1021 VLESPYFFN 1029
BLAST of Lcy09g003050 vs. ExPASy TrEMBL
Match:
A0A0A0KXM5 (DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G642180 PE=3 SV=1)
HSP 1 Score: 1662.1 bits (4303), Expect = 0.0e+00
Identity = 830/998 (83.17%), Postives = 892/998 (89.38%), Query Frame = 0
Query: 32 MIST--WKTIAKQAISRNRKFHLDWYCFSR--SVLGHPHEALFREKLISGNFVLSSLPKF 91
MIST WKTIAK+ I RNR+FH DW SR VLG P+E+LFR+KLISGNFV SSLPKF
Sbjct: 1 MISTSMWKTIAKRGICRNRQFHPDWRWLSRFNGVLGRPNESLFRDKLISGNFVPSSLPKF 60
Query: 92 GILEMGIGRNEISSQED-YGSRFCFGSLGARIGLNGSCPKGYSSVAEAVSSTDVDEDASV 151
G EMG+GR+EI SQED Y SRFCFGS+GARIGLNG CPKGYSSVAEAVSSTDVDEDASV
Sbjct: 61 GSFEMGVGRSEILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASV 120
Query: 152 DDEIQELLQEMSKEEKRQVEYRRRRLKMAKGMGQGKYQMLKRRQVAIETEAWEQAVKEYK 211
D ++QE +QEMSKEEK RLK KGMGQ KY ML+RRQV IE EAWE A KEY+
Sbjct: 121 DGKVQESVQEMSKEEK--------RLKPVKGMGQWKYNMLRRRQVTIEAEAWENAAKEYR 180
Query: 212 ELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISKEQELIREGK-NRTAYAPYFDQLPAD 271
ELL+DMCKQKLAPNLPY+KSLFLGWFEP DAI KEQELI+EGK +R YAPYF QLPAD
Sbjct: 181 ELLVDMCKQKLAPNLPYVKSLFLGWFEPFQDAIIKEQELIQEGKRSRAPYAPYFLQLPAD 240
Query: 272 MMSVITMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNEN 331
MSVITMHKLMGLLM G EHG+ RVVQAAC IGDAIEQEVRIHKFLEK K++ HNKDNEN
Sbjct: 241 KMSVITMHKLMGLLMRGSEHGSVRVVQAACAIGDAIEQEVRIHKFLEKKKERTHNKDNEN 300
Query: 332 DEKPDSQIKEQERLRKKVTNLIKKQKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLT 391
+++PD + KEQERLRKKVTNLIKK+K A QI K ADDS+PWG++ KAKVG+RLIELL
Sbjct: 301 NDQPDIERKEQERLRKKVTNLIKKKKHLAAGQIAKRADDSRPWGRELKAKVGARLIELLI 360
Query: 392 QTAYIQPPADQLADGPPDIRPAFRHSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTAR 451
QTAYIQPPADQLADGPPD RPAF HS +T +K N R GVIECDPLV+KGL+ TAR
Sbjct: 361 QTAYIQPPADQLADGPPDPRPAFVHSLKTSVKDG-TNFMGRLGVIECDPLVVKGLDWTAR 420
Query: 452 HMVIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALD 511
+VIPYMPML+PPV W GYDKGGHI LPSF MRTHGAKQQRDA KRTPKQQLTPVFEALD
Sbjct: 421 QIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKQQLTPVFEALD 480
Query: 512 TLGNTKWRINKKILSVVDRIWTSGGRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSV 571
TLGNTKWRINK+IL+VV+RIWTSGG LA LVDQDD+PLPEKPD+EDETL++KWKW+V+SV
Sbjct: 481 TLGNTKWRINKRILNVVERIWTSGGHLAGLVDQDDVPLPEKPDTEDETLIKKWKWEVRSV 540
Query: 572 KKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 631
KKENMERHSQRCDIELKL VARKMKDEEGFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGI
Sbjct: 541 KKENMERHSQRCDIELKLTVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGI 600
Query: 632 LEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRR 691
LEFAEGR LRKSGL WLKIHLANLFAGGVDKLSHDGRM FIENHLEDIFDSADRPLEG R
Sbjct: 601 LEFAEGRSLRKSGLIWLKIHLANLFAGGVDKLSHDGRMTFIENHLEDIFDSADRPLEGGR 660
Query: 692 WWLNAEDPFQFLAACMNLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAA 751
WW+NAEDPFQFLA CMNLTEALRSSSPET+ISHIPIHQDGSCNGLQHYAALGRDK GAAA
Sbjct: 661 WWMNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKSGAAA 720
Query: 752 VNLVVREKPADVYSGIAARVLEIMRRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTS 811
VNLV EKPADVYSGIAARVLEI++RDAQKDP TFPDAL AK LIDQVDRKLVKQTVMTS
Sbjct: 721 VNLVAGEKPADVYSGIAARVLEILKRDAQKDPETFPDALHAKILIDQVDRKLVKQTVMTS 780
Query: 812 VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGD 871
VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAK TL ALGEMF AAR IM+WL D
Sbjct: 781 VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKITLEALGEMFVAAREIMNWLSD 840
Query: 872 CAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFP 931
CAKIIAS+N+ VRWTTPLGLPVVQPYRKLG H IKTSLQ+LTL+RETDK+L+ RQRTAFP
Sbjct: 841 CAKIIASKNETVRWTTPLGLPVVQPYRKLGIHAIKTSLQVLTLRRETDKILSSRQRTAFP 900
Query: 932 PNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL 991
PNFVHSLD SHMMMTAVACK+AGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL
Sbjct: 901 PNFVHSLDSSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL 960
Query: 992 ENLLEGFQRSFPTLDFPPLPERGEFDLKEVLESPYFFN 1024
ENLLE F++SFP LDFPPLPERGEF+LKEVL+SPYFFN
Sbjct: 961 ENLLESFEQSFPALDFPPLPERGEFNLKEVLDSPYFFN 989
BLAST of Lcy09g003050 vs. ExPASy TrEMBL
Match:
A0A1S3CBC4 (DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103498556 PE=3 SV=1)
HSP 1 Score: 1656.3 bits (4288), Expect = 0.0e+00
Identity = 821/998 (82.26%), Postives = 892/998 (89.38%), Query Frame = 0
Query: 32 MIST--WKTIAKQAISRNRKFHLDWYCFSR--SVLGHPHEALFREKLISGNFVLSSLPKF 91
MIST WKTIAK+ I RNR+FH DW CFSR VLG P+E+LFR+KLISGN V SSLPKF
Sbjct: 1 MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60
Query: 92 GILEMGIGRNEISSQED-YGSRFCFGSLGARIGLNGSCPKGYSSVAEAVSSTDVDEDASV 151
G +MG+GRN+I SQED Y SRFCFGS+GARIGLNG CPKGYSSVAEAVSSTDVDEDAS+
Sbjct: 61 GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120
Query: 152 DDEIQELLQEMSKEEKRQVEYRRRRLKMAKGMGQGKYQMLKRRQVAIETEAWEQAVKEYK 211
D E+QELLQEMSKEE RLK KGM KY ML+RRQV +E EAWE+AVKEYK
Sbjct: 121 DGEVQELLQEMSKEE--------TRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYK 180
Query: 212 ELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISKEQELIREGKN-RTAYAPYFDQLPAD 271
ELL DMCKQKLAPNLPY+KSLFLGWFEP +AI+KEQELI++GK R YAPYF QLPAD
Sbjct: 181 ELLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPAD 240
Query: 272 MMSVITMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNEN 331
MSVITMHKLMG+LM G EHGN +VV AAC IGDAIEQEVRIHKFLEK K+K+HNK+NEN
Sbjct: 241 KMSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNEN 300
Query: 332 DEKPDSQIKEQERLRKKVTNLIKKQKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLT 391
+ +PDSQ+KEQERLRK V NLIKK+K AV QI KG DDS+PWG++AKAKVG+RLIELL
Sbjct: 301 NYQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLI 360
Query: 392 QTAYIQPPADQLADGPPDIRPAFRHSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTAR 451
QTAYIQPPADQLADGPPDIRPAF HS +TV+ NS R GVIECDPLVIKGL+RTAR
Sbjct: 361 QTAYIQPPADQLADGPPDIRPAFWHSLKTVVTD---NSVGRLGVIECDPLVIKGLDRTAR 420
Query: 452 HMVIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALD 511
+VIPYMPML+PPV W GYDKGGHI LPSF MRTHGAKQQRDA KRTPK+QLTPVF+ALD
Sbjct: 421 QIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALD 480
Query: 512 TLGNTKWRINKKILSVVDRIWTSGGRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSV 571
TLGNTKWRINK+IL VV+RIW+SGG LA LV++DD+PLPEKPD+EDETL++KWKW+++SV
Sbjct: 481 TLGNTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSV 540
Query: 572 KKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 631
KKENMERHSQRCDIELKLAVAR MKDEEGFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGI
Sbjct: 541 KKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGI 600
Query: 632 LEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRR 691
LEFAEGRPLRKSGL WLKIHLANLFAGGVDKLSHDGRM F+ENHLEDIFDSAD+PL GRR
Sbjct: 601 LEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRR 660
Query: 692 WWLNAEDPFQFLAACMNLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAA 751
WWLNAEDPFQFLA CMNLTEALRSSSPET+ISHIPIHQDGSCNGLQHYAALGRDKLGAA+
Sbjct: 661 WWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAAS 720
Query: 752 VNLVVREKPADVYSGIAARVLEIMRRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTS 811
VNLV EKPADVYSGIAARV EI+RRDAQKDP TFPDA+ AK LIDQVDRKLVKQTVMTS
Sbjct: 721 VNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTS 780
Query: 812 VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGD 871
VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAK TL ALGEMF AAR IM+WL D
Sbjct: 781 VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSD 840
Query: 872 CAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFP 931
CAKIIAS+N+ VRWTTPLGLPVVQPYRKLG IKTSLQ+LTL+RETDK+L RQRTAFP
Sbjct: 841 CAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFP 900
Query: 932 PNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL 991
PNFVHSLD SHMMMTA+AC +AGL FAGVHDSYWTHACDVDEMNRILR+KFVELYETPIL
Sbjct: 901 PNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETPIL 960
Query: 992 ENLLEGFQRSFPTLDFPPLPERGEFDLKEVLESPYFFN 1024
E+LLE FQ+SFP LDFPPLPERGEFDLKEVL+SPYFFN
Sbjct: 961 EDLLESFQQSFPALDFPPLPERGEFDLKEVLDSPYFFN 987
BLAST of Lcy09g003050 vs. NCBI nr
Match:
XP_022993982.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 1889.0 bits (4892), Expect = 0.0e+00
Identity = 928/1027 (90.36%), Postives = 981/1027 (95.52%), Query Frame = 0
Query: 1 MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYCFS 60
MSFCQCS +LT K ++ LLLQ+PTN HQNP MIST WKTIAKQAIS+NR+FHLDW+C S
Sbjct: 1 MSFCQCSFNLTGKFENFLLLQQPTNFHQNPPMISTSMWKTIAKQAISKNRQFHLDWHCLS 60
Query: 61 RS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGA 120
RS V+G +E++ REKLIS FVLSSLPKFGI E+GIGR+E+ SQ+DYGSRFCFGS+G
Sbjct: 61 RSHGVMGRLNESIIREKLISDKFVLSSLPKFGISELGIGRSEVLSQDDYGSRFCFGSMGV 120
Query: 121 RIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKMAK 180
RIGLNGSCPKGYSSVAEAVSSTDVDED+S+D+EIQELLQEM KEEKRQV+ RRR LK K
Sbjct: 121 RIGLNGSCPKGYSSVAEAVSSTDVDEDSSIDEEIQELLQEMRKEEKRQVQRRRRGLKRVK 180
Query: 181 GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLH 240
GMG+ KYQMLKRRQVAIETEAW+QAVKEYKELLMDMC+QKLAPNLPYMKSLFLGWFEPL
Sbjct: 181 GMGEEKYQMLKRRQVAIETEAWKQAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 240
Query: 241 DAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACV 300
DAISKEQELIR GKNRTAYAPYFDQL ADMMSV+TMHKLMGLLMMGHEHGNARVVQAACV
Sbjct: 241 DAISKEQELIRIGKNRTAYAPYFDQLSADMMSVVTMHKLMGLLMMGHEHGNARVVQAACV 300
Query: 301 IGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVR 360
IGDAIEQEVRIH+FLEKMKKK+H+KDNEN++KPDSQ+KEQERLRKKVTNLIK QKLPAVR
Sbjct: 301 IGDAIEQEVRIHRFLEKMKKKKHDKDNENNDKPDSQLKEQERLRKKVTNLIKMQKLPAVR 360
Query: 361 QIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVM 420
IVKGADDSKPWG DAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFR VM
Sbjct: 361 HIVKGADDSKPWGPDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRIVM 420
Query: 421 KQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFV 480
K+A KNSSRR GVIECDPLV+KGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSF+
Sbjct: 421 KEANKNSSRRYGVIECDPLVVKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFI 480
Query: 481 MRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLV 540
MRT GA QQR+AVKRTPKQQLTPVFEALDTLGNTKWRINKKILS+VDRIWTSGG LADLV
Sbjct: 481 MRTRGANQQREAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSIVDRIWTSGGCLADLV 540
Query: 541 DQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFY 600
D+DD+PLPEKPDSEDETLLRKWKWKVKSVKKEN+ERHSQRCDIELKLAVARKMKDEEGFY
Sbjct: 541 DRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENVERHSQRCDIELKLAVARKMKDEEGFY 600
Query: 601 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 660
+PHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK
Sbjct: 601 FPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 660
Query: 661 LSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFI 720
LSHDGR+ FI++H+EDIFDSADRPLEGRRWWLNAEDPFQFLA CMNLTEALRSSSPET I
Sbjct: 661 LSHDGRITFIDDHVEDIFDSADRPLEGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETVI 720
Query: 721 SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKD 780
SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL V EKPADVYSGIAARVLEI+R+DAQ+D
Sbjct: 721 SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLTVTEKPADVYSGIAARVLEIVRKDAQRD 780
Query: 781 PATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFG 840
P TFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDD+ELFG
Sbjct: 781 PETFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDTELFG 840
Query: 841 CSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 900
C+CYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR
Sbjct: 841 CACYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 900
Query: 901 HLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 960
HL+KTSLQ+LTLQ+ETDKVL KRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD
Sbjct: 901 HLVKTSLQVLTLQQETDKVLVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 960
Query: 961 SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVL 1020
SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQ+SFP LDFPPLPERGE DLKEVL
Sbjct: 961 SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQQSFPVLDFPPLPERGELDLKEVL 1020
Query: 1021 ESPYFFN 1024
ESPYFFN
Sbjct: 1021 ESPYFFN 1027
BLAST of Lcy09g003050 vs. NCBI nr
Match:
XP_022939617.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 1879.0 bits (4866), Expect = 0.0e+00
Identity = 924/1027 (89.97%), Postives = 978/1027 (95.23%), Query Frame = 0
Query: 1 MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYCFS 60
MSFCQCS +LT K ++ LLLQ+PTN HQNP MIST WKTIAKQAIS+NR+FHLDW+C S
Sbjct: 1 MSFCQCSFNLTGKFENFLLLQQPTNFHQNPPMISTSMWKTIAKQAISKNRQFHLDWHCLS 60
Query: 61 RS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGA 120
RS V+G +E++ REKLIS FVLSSLPKFGI E+GIGR+E+ SQEDYGSRFCFGS+G
Sbjct: 61 RSHGVMGRLNESIIREKLISDKFVLSSLPKFGISELGIGRSEVLSQEDYGSRFCFGSMGV 120
Query: 121 RIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKMAK 180
RIGLNGS PKGYSSVAEAVSSTDVDED+S D+EIQELLQEM KEEKRQV+ RRRRLK K
Sbjct: 121 RIGLNGSIPKGYSSVAEAVSSTDVDEDSSSDEEIQELLQEMRKEEKRQVQRRRRRLKWVK 180
Query: 181 GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLH 240
GMG+ KYQMLKRRQVAIETEAW+QAVKEYKELLMDMC+QKLAPNLPYMKSLFLGWFEPL
Sbjct: 181 GMGEQKYQMLKRRQVAIETEAWKQAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 240
Query: 241 DAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAACV 300
DAISKEQELIR GKNR AYAPYFDQL ADMMSV+TMHKL+GLLMMGHEHGNARVVQAAC
Sbjct: 241 DAISKEQELIRIGKNRAAYAPYFDQLSADMMSVVTMHKLIGLLMMGHEHGNARVVQAACA 300
Query: 301 IGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAVR 360
IGDAIEQEVRIH+FLEKMKKK+H+KDNEN++KPDSQ+KEQE LRKKVTNLIKKQKLPAVR
Sbjct: 301 IGDAIEQEVRIHRFLEKMKKKKHDKDNENNDKPDSQLKEQEWLRKKVTNLIKKQKLPAVR 360
Query: 361 QIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVM 420
IVKGADDSKPWG DAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFR VM
Sbjct: 361 HIVKGADDSKPWGPDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRIVM 420
Query: 421 KQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFV 480
K+A KNSSRR GVIECDPLV+KGLE+TARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSF+
Sbjct: 421 KEANKNSSRRYGVIECDPLVVKGLEKTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFI 480
Query: 481 MRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLV 540
MRT GA QQR+AVKRTPKQQLTPVFEALDTLGNTKWRINKKILS+VDRIWTSGGRLADLV
Sbjct: 481 MRTRGANQQREAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSIVDRIWTSGGRLADLV 540
Query: 541 DQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFY 600
D+DD+PLPEKPDSEDETLLRKWKWKVKSVKKEN+ERHSQRCDIELKLAVA KMKDEEGFY
Sbjct: 541 DRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENVERHSQRCDIELKLAVAHKMKDEEGFY 600
Query: 601 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 660
YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPL KSGLRWLKIHLANLFAGGVDK
Sbjct: 601 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAGGVDK 660
Query: 661 LSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFI 720
LSHDGR+ FI++H+EDIFDSADRPLEGRRWWLNAEDPFQFLA CMNLTEALRSSSPET I
Sbjct: 661 LSHDGRITFIDDHVEDIFDSADRPLEGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETVI 720
Query: 721 SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKD 780
SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL VREKPADVYSGIAARVLEI+R+DAQ+D
Sbjct: 721 SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLAVREKPADVYSGIAARVLEIVRKDAQRD 780
Query: 781 PATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFG 840
P TFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDD+ELFG
Sbjct: 781 PETFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDTELFG 840
Query: 841 CSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 900
C+CYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLG+
Sbjct: 841 CACYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGK 900
Query: 901 HLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 960
HL+KTSLQ+LTLQ+ETDKVL KRQRTAFPPNFVHSLDGSHMMMTAVACK+AGLNFAGVHD
Sbjct: 901 HLVKTSLQVLTLQQETDKVLVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHD 960
Query: 961 SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVL 1020
SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQ+SFP LDFPPLPERGE DLKEVL
Sbjct: 961 SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQQSFPALDFPPLPERGELDLKEVL 1020
Query: 1021 ESPYFFN 1024
ESPYFFN
Sbjct: 1021 ESPYFFN 1027
BLAST of Lcy09g003050 vs. NCBI nr
Match:
XP_022134053.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Momordica charantia])
HSP 1 Score: 1875.5 bits (4857), Expect = 0.0e+00
Identity = 936/1029 (90.96%), Postives = 970/1029 (94.27%), Query Frame = 0
Query: 1 MSFCQCSLSLTSKID--HSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYC 60
MSFCQCS +LTSK D HSL LQKPTN H PSMIST WK IAKQAISRNRKF LDW+
Sbjct: 1 MSFCQCSSNLTSKFDHHHSLPLQKPTNFHLAPSMISTSVWKIIAKQAISRNRKFRLDWHS 60
Query: 61 FSRS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSL 120
FSRS VLG PHE+LF EK +SG+ V SSLPKFG EM IGRNEI SQE YGSRFCFGS+
Sbjct: 61 FSRSHGVLGRPHESLFPEKFMSGSSVFSSLPKFGTWEMDIGRNEILSQEVYGSRFCFGSV 120
Query: 121 GARIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRLKM 180
G RIGLNG CPKG+SSVAEAVSSTDVDEDASVDDEIQELLQEM+KEEKRQVEYRRRR KM
Sbjct: 121 GTRIGLNGMCPKGFSSVAEAVSSTDVDEDASVDDEIQELLQEMTKEEKRQVEYRRRRQKM 180
Query: 181 AKGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEP 240
AKGMGQGKYQMLKRRQV IETEAWE AVKEYKELLMDMC+QKLAPNLPYMKSLFLGWFEP
Sbjct: 181 AKGMGQGKYQMLKRRQVKIETEAWELAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEP 240
Query: 241 LHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAA 300
L DAI KEQELIREGKNRTAYAPYFD+LPADMMSVITMHKLMGLLMMGHEHGNARVVQAA
Sbjct: 241 LRDAIIKEQELIREGKNRTAYAPYFDRLPADMMSVITMHKLMGLLMMGHEHGNARVVQAA 300
Query: 301 CVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPA 360
CVIGDAIEQE+RIH FLEKMKKK+H+KD EN++KPDS IKEQE+LRKKVTNLIKKQKLPA
Sbjct: 301 CVIGDAIEQEIRIHNFLEKMKKKKHDKDGENNDKPDSLIKEQEKLRKKVTNLIKKQKLPA 360
Query: 361 VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT 420
VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT
Sbjct: 361 VRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRT 420
Query: 421 VMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS 480
VMK+A KNSSRR GVIECDPLV+KGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS
Sbjct: 421 VMKEANKNSSRRYGVIECDPLVVKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPS 480
Query: 481 FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLAD 540
FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINK+ILSVVDRIWT GGRLAD
Sbjct: 481 FVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKRILSVVDRIWTGGGRLAD 540
Query: 541 LVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG 600
LVD+DD+PLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG
Sbjct: 541 LVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEG 600
Query: 601 FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGV 660
FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGL WLKIHLANLFAGGV
Sbjct: 601 FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLNWLKIHLANLFAGGV 660
Query: 661 DKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPET 720
DKLSHDGRM FIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRS SPET
Sbjct: 661 DKLSHDGRMTFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSFSPET 720
Query: 721 FISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQ 780
FISHIP+HQDGSCNGLQHYAALGRDKLGA AVNLV EKPADVY+GIAARVLEIM+RDAQ
Sbjct: 721 FISHIPVHQDGSCNGLQHYAALGRDKLGATAVNLVTGEKPADVYTGIAARVLEIMQRDAQ 780
Query: 781 KDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSEL 840
+DPA FPDALRAK LIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERA+IS +
Sbjct: 781 RDPAIFPDALRAKRLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERASISXXXXV 840
Query: 841 FGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKL 900
+ + + TLTALGEMFEAARGIM+WLGDCAKIIASENQPVRWTTPLGLPVVQPYR L
Sbjct: 841 MSSNIMSEQITLTALGEMFEAARGIMNWLGDCAKIIASENQPVRWTTPLGLPVVQPYRVL 900
Query: 901 GRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGV 960
GRHLIKTSLQ+LTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL+FAGV
Sbjct: 901 GRHLIKTSLQVLTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLSFAGV 960
Query: 961 HDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKE 1020
HDSYWTHACDVDEMNRILREKFVELYE PILENLLEGFQRSFPTL+FPPLPERGEFDLKE
Sbjct: 961 HDSYWTHACDVDEMNRILREKFVELYEMPILENLLEGFQRSFPTLNFPPLPERGEFDLKE 1020
Query: 1021 VLESPYFFN 1024
VLESPYFFN
Sbjct: 1021 VLESPYFFN 1029
BLAST of Lcy09g003050 vs. NCBI nr
Match:
XP_038890080.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like isoform X1 [Benincasa hispida])
HSP 1 Score: 1873.2 bits (4851), Expect = 0.0e+00
Identity = 931/1028 (90.56%), Postives = 971/1028 (94.46%), Query Frame = 0
Query: 1 MSFCQCSLSLTSKIDHSLLLQKPTNSHQNPSMIST--WKTIAKQAISRNRKFHLDWYCFS 60
MSFCQCS +LTSK D+ LLL+ PT H+NP MIST WKT+AKQAI RNR+FHL W+CFS
Sbjct: 1 MSFCQCSSNLTSKFDNFLLLKNPTIFHENPPMISTSMWKTLAKQAICRNRQFHLGWHCFS 60
Query: 61 RS--VLGHPHEALFREKLISGNFVLSSLPKFGILEMGIGRNEISSQEDYGSRFCFGSLGA 120
S VLG P+E+LFREKLISGNFVLSSLPKFG EMGIGRNE+ SQEDYGSR CFGS+GA
Sbjct: 61 CSSGVLGRPNESLFREKLISGNFVLSSLPKFGSWEMGIGRNEVLSQEDYGSRLCFGSMGA 120
Query: 121 RIGLNGSCPKGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYR-RRRLKMA 180
RIGLNGSC KGYSSVAEAVSSTDVDEDASVD+EIQELLQEMSKEEKRQV RRR+KM
Sbjct: 121 RIGLNGSCSKGYSSVAEAVSSTDVDEDASVDNEIQELLQEMSKEEKRQVTCSWRRRMKMV 180
Query: 181 KGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPL 240
KGMG GKYQML+RRQVAIETEAWEQAVKEYKELLMDMC+QKLAP LPYMKSLFLGWFEPL
Sbjct: 181 KGMGAGKYQMLRRRQVAIETEAWEQAVKEYKELLMDMCEQKLAPTLPYMKSLFLGWFEPL 240
Query: 241 HDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQAAC 300
DAISKEQELIR+GKNRT YAPYFDQLPADMMSVITMHKLMGLLMMGHE GN RVVQAAC
Sbjct: 241 CDAISKEQELIRQGKNRTPYAPYFDQLPADMMSVITMHKLMGLLMMGHERGNTRVVQAAC 300
Query: 301 VIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLPAV 360
VIGDAIEQEVRIHKFLEK KKK H+KDNEN+++PDSQ+KE E LR+KV+NLIKKQKLPAV
Sbjct: 301 VIGDAIEQEVRIHKFLEKKKKKTHDKDNENNDQPDSQMKEHEGLRQKVSNLIKKQKLPAV 360
Query: 361 RQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTV 420
RQI+KG DDS+PWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHS RTV
Sbjct: 361 RQILKGTDDSRPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSLRTV 420
Query: 421 MKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSF 480
MK+A KNS RR GVIECDPLV+KGLERTARH+VIPYMPMLVPPVNWTGYDKGGHIFLPSF
Sbjct: 421 MKKATKNSGRRYGVIECDPLVVKGLERTARHIVIPYMPMLVPPVNWTGYDKGGHIFLPSF 480
Query: 481 VMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADL 540
VMRTHGAKQQR+AVKR PKQQL PVFEALDTLG+TKWRIN KILSVVDRIWTSGGRLADL
Sbjct: 481 VMRTHGAKQQREAVKRAPKQQLAPVFEALDTLGSTKWRINVKILSVVDRIWTSGGRLADL 540
Query: 541 VDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGF 600
VD+DD+P PEKPDSEDE LLRKWKWKVKSVKKENMERHSQRCDIELKLAVA KMKDEEGF
Sbjct: 541 VDRDDVPFPEKPDSEDEVLLRKWKWKVKSVKKENMERHSQRCDIELKLAVAGKMKDEEGF 600
Query: 601 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVD 660
YYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGL WLKIHLANLFAGGVD
Sbjct: 601 YYPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLGWLKIHLANLFAGGVD 660
Query: 661 KLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETF 720
KLSHDGRM FIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETF
Sbjct: 661 KLSHDGRMTFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETF 720
Query: 721 ISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQK 780
ISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLV EKPADVY GIAARVLEIMRRDAQK
Sbjct: 721 ISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYLGIAARVLEIMRRDAQK 780
Query: 781 DPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELF 840
DPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDS+LF
Sbjct: 781 DPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSDLF 840
Query: 841 GCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLG 900
GCSCYAAKTT+TALGEMFEAARGIM+WLGDCAKIIASENQPVRWTTP+GLPVVQPYRKLG
Sbjct: 841 GCSCYAAKTTMTALGEMFEAARGIMNWLGDCAKIIASENQPVRWTTPIGLPVVQPYRKLG 900
Query: 901 RHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVH 960
H IKTSLQ+LTL+RETDKVL +RQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVH
Sbjct: 901 EHHIKTSLQVLTLRRETDKVLTRRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVH 960
Query: 961 DSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEV 1020
DSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFP L FPPLPE GEFDLKEV
Sbjct: 961 DSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPGLVFPPLPELGEFDLKEV 1020
Query: 1021 LESPYFFN 1024
LESPYFFN
Sbjct: 1021 LESPYFFN 1028
BLAST of Lcy09g003050 vs. NCBI nr
Match:
XP_023551171.1 (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1838.5 bits (4761), Expect = 0.0e+00
Identity = 902/996 (90.56%), Postives = 951/996 (95.48%), Query Frame = 0
Query: 32 MIST--WKTIAKQAISRNRKFHLDWYCFSRS--VLGHPHEALFREKLISGNFVLSSLPKF 91
MIST WKTIAKQAIS+NR+FHLDW+C SRS V+G +E++ EKLIS FVLSSLPKF
Sbjct: 1 MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF 60
Query: 92 GILEMGIGRNEISSQEDYGSRFCFGSLGARIGLNGSCPKGYSSVAEAVSSTDVDEDASVD 151
GI E+GIGR+E+ SQEDYGSRFCFGS+G RIGLNGS PKGYSSVAEAVSSTDVDED+S+D
Sbjct: 61 GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSID 120
Query: 152 DEIQELLQEMSKEEKRQVEYRRRRLKMAKGMGQGKYQMLKRRQVAIETEAWEQAVKEYKE 211
+EIQELLQEM KEEKRQV+ RRRRLK KGMG+ KYQMLKRRQVAIETEAW+QAVKEYKE
Sbjct: 121 EEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 180
Query: 212 LLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISKEQELIREGKNRTAYAPYFDQLPADMM 271
LLMDMC+QKLAPNLPYMKSLFLGWFEPL DAISKEQELIR GKNR AYAPYFDQL ADMM
Sbjct: 181 LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 240
Query: 272 SVITMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDE 331
SV+TMHKL+GLLMMGHEHGNARVVQAAC IGDAIEQEVRIH+FLEKMKKK+H+KDNEN++
Sbjct: 241 SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 300
Query: 332 KPDSQIKEQERLRKKVTNLIKKQKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQT 391
KPDSQ+KEQE LRKKVTNLIKKQKLPAVR IVKG DDSKPWG DAKAKVGSRLIELLTQT
Sbjct: 301 KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQT 360
Query: 392 AYIQPPADQLADGPPDIRPAFRHSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTARHM 451
AYIQPP DQLADGPPDIRPAFRHSFR VMK+A KNSSRR GVIECDPLV+ GLERTARHM
Sbjct: 361 AYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHM 420
Query: 452 VIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTL 511
VIPYMPMLVPPVNWTGYDKGGHIFLPSF+MRT GA QQR+AVKRTPKQQLTPVFEALDTL
Sbjct: 421 VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 480
Query: 512 GNTKWRINKKILSVVDRIWTSGGRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKK 571
GNTKWRINKKILS+VDRIWTSGGRLADLVD+DD+PLPEKPDSEDETLLRKWKWKVKSVKK
Sbjct: 481 GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 540
Query: 572 ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 631
ENMERHSQRCDIELKLAVARKMKDEEGFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILE
Sbjct: 541 ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILE 600
Query: 632 FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWW 691
FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRM FI+NH+EDIFDSADRPLEGRRWW
Sbjct: 601 FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWW 660
Query: 692 LNAEDPFQFLAACMNLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 751
LNAEDPFQFLA CMNLTEALR+SSPET ISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN
Sbjct: 661 LNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 720
Query: 752 LVVREKPADVYSGIAARVLEIMRRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVY 811
L VREKPADVYSGIAARVLEI+R+DAQ+DP TFPDALRAKTLIDQVDRKLVKQTVMTSVY
Sbjct: 721 LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 780
Query: 812 GVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCA 871
GVTYIGAR+QIKRRLKERA ISDD+ELFGC+CYAAKTTLTALGEMFEAARGIMSWLGDCA
Sbjct: 781 GVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 840
Query: 872 KIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPN 931
KIIASENQPVRWTTPLGLPVVQPYRKLG+H++KTSLQ+LTLQ+ETDKVL KRQRTAFPPN
Sbjct: 841 KIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPN 900
Query: 932 FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 991
FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN
Sbjct: 901 FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 960
Query: 992 LLEGFQRSFPTLDFPPLPERGEFDLKEVLESPYFFN 1024
LLEGFQ+SFP LDFPPLPERGE DLKEVLESPYFFN
Sbjct: 961 LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996
BLAST of Lcy09g003050 vs. TAIR 10
Match:
AT5G15700.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 1323.5 bits (3424), Expect = 0.0e+00
Identity = 685/1034 (66.25%), Postives = 813/1034 (78.63%), Query Frame = 0
Query: 1 MSFCQCSLSL---TSKIDHSLLLQKPTNSHQNP--SMISTWKTIAKQAISRNRKFHLDWY 60
MS Q L L T DH + L KP S NP W+ IAKQAISR+ L+
Sbjct: 1 MSSAQTPLFLANQTKVFDHLIPLHKPFISSPNPVSQSFPMWRNIAKQAISRSAA-RLNVS 60
Query: 61 CFSRSVLGHPHEALFREKLISGNFVLSSLPKFG---ILEMGIGRNEISSQEDYGSRFCFG 120
+R +L E++F K +S F + P G GI R E S+ S C
Sbjct: 61 SQTRGLLVSSPESIF-SKNLSFRFPVLGSPCHGKGFRCLSGITRREEFSK----SERC-- 120
Query: 121 SLGARIGLNGSCPKGYSSVA-EAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRR 180
L+G+ +GY+SVA E V STDV+E+ VD ELL+EM KE+KR+ +R R
Sbjct: 121 -------LSGTLARGYTSVAEEEVLSTDVEEEPEVD----ELLKEMKKEKKRE-SHRSWR 180
Query: 181 LKMAK--GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFL 240
+K GMG+ K+Q L RRQV IETE WE+A EY ELL DMC+QKLAPNLPY+KSLFL
Sbjct: 181 MKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFL 240
Query: 241 GWFEPLHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNAR 300
GWFEPL DAI+K+QEL R GK++ YA Y DQLPAD +SVITMHKLMG LM G ++G +
Sbjct: 241 GWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGGDNGCVK 300
Query: 301 VVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKK 360
VV AAC +GDAIEQE+RI FL+K KK N+++ E ++ +KEQ++LRKKV LIKK
Sbjct: 301 VVHAACTVGDAIEQEIRICTFLDKKKKGDDNEESGGVEN-ETSMKEQDKLRKKVNELIKK 360
Query: 361 QKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFR 420
QKL AVR+I++ D +KPW D +AKVGSRLIELL +TAYIQ PADQ + PD+RPAF
Sbjct: 361 QKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFV 420
Query: 421 HSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGH 480
H+F+ + + NS R+ GVIECDPLV KGLE++ R+ V+PYMPMLVPP+ W+GYDKG +
Sbjct: 421 HTFK--VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAY 480
Query: 481 IFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSG 540
+FL S++M+THGAKQQR+A+K PK QL PVFEALDTLG+TKWR+NK++L+VVDRIW+SG
Sbjct: 481 LFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSG 540
Query: 541 GRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKM 600
G +AD+VD+ D+PLPEKPD+EDE +L+KWKW+VKS KK N ERHSQRCD ELKL+VARKM
Sbjct: 541 GCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKM 600
Query: 601 KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANL 660
KDEE FYYPHN+DFRGRAYPM P+LNHLGSDLCRG+LEFAEGRP+ SGLRWLKIHLANL
Sbjct: 601 KDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANL 660
Query: 661 FAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRS 720
+AGGVDKLS DGR+AF ENHL+DIFDSADRPLEG RWWL AEDPFQ LA C++LTEALRS
Sbjct: 661 YAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRS 720
Query: 721 SSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIM 780
SPET +SHIPIHQDGSCNGLQHYAALGRD LGA AVNLV EKPADVYSGIA RVL+IM
Sbjct: 721 PSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIM 780
Query: 781 RRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAIS 840
RRDA +DP FP+ALRA+ L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER+
Sbjct: 781 RRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFG 840
Query: 841 DDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQ 900
D+ E+FG +CYAAK TL A+ EMF+AAR IM W G+CAKIIASEN+ VRWTTPLGLPVVQ
Sbjct: 841 DEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQ 900
Query: 901 PYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL 960
PY ++G L+KTSLQ L+LQ ETD+V+ +RQRTAFPPNF+HSLDGSHMMMTAVACK+AG+
Sbjct: 901 PYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGV 960
Query: 961 NFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGE 1020
FAGVHDS+WTHACDVD++N ILREKFVELY PILENLLE F++SFP LDFPPLPERG+
Sbjct: 961 CFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGD 1011
Query: 1021 FDLKEVLESPYFFN 1024
DLK VL+SPYFFN
Sbjct: 1021 LDLKVVLDSPYFFN 1011
BLAST of Lcy09g003050 vs. TAIR 10
Match:
AT5G15700.2 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 1306.2 bits (3379), Expect = 0.0e+00
Identity = 677/1024 (66.11%), Postives = 804/1024 (78.52%), Query Frame = 0
Query: 1 MSFCQCSLSL---TSKIDHSLLLQKPTNSHQNP--SMISTWKTIAKQAISRNRKFHLDWY 60
MS Q L L T DH + L KP S NP W+ IAKQAISR+ L+
Sbjct: 1 MSSAQTPLFLANQTKVFDHLIPLHKPFISSPNPVSQSFPMWRNIAKQAISRSAA-RLNVS 60
Query: 61 CFSRSVLGHPHEALFREKLISGNFVLSSLPKFG---ILEMGIGRNEISSQEDYGSRFCFG 120
+R +L E++F K +S F + P G GI R E S+ S C
Sbjct: 61 SQTRGLLVSSPESIF-SKNLSFRFPVLGSPCHGKGFRCLSGITRREEFSK----SERC-- 120
Query: 121 SLGARIGLNGSCPKGYSSVA-EAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRR 180
L+G+ +GY+SVA E V STDV+E+ VD ELL+EM KE+KR+ +R R
Sbjct: 121 -------LSGTLARGYTSVAEEEVLSTDVEEEPEVD----ELLKEMKKEKKRE-SHRSWR 180
Query: 181 LKMAK--GMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFL 240
+K GMG+ K+Q L RRQV IETE WE+A EY ELL DMC+QKLAPNLPY+KSLFL
Sbjct: 181 MKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFL 240
Query: 241 GWFEPLHDAISKEQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNAR 300
GWFEPL DAI+K+QEL R GK++ YA Y DQLPAD +SVITMHKLMG LM G ++G +
Sbjct: 241 GWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGGDNGCVK 300
Query: 301 VVQAACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKK 360
VV AAC +GDAIEQE+RI FL+K KK N+++ E ++ +KEQ++LRKKV LIKK
Sbjct: 301 VVHAACTVGDAIEQEIRICTFLDKKKKGDDNEESGGVEN-ETSMKEQDKLRKKVNELIKK 360
Query: 361 QKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFR 420
QKL AVR+I++ D +KPW D +AKVGSRLIELL +TAYIQ PADQ + PD+RPAF
Sbjct: 361 QKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFV 420
Query: 421 HSFRTVMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGH 480
H+F+ + + NS R+ GVIECDPLV KGLE++ R+ V+PYMPMLVPP+ W+GYDKG +
Sbjct: 421 HTFK--VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAY 480
Query: 481 IFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSG 540
+FL S++M+THGAKQQR+A+K PK QL PVFEALDTLG+TKWR+NK++L+VVDRIW+SG
Sbjct: 481 LFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSG 540
Query: 541 GRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKM 600
G +AD+VD+ D+PLPEKPD+EDE +L+KWKW+VKS KK N ERHSQRCD ELKL+VARKM
Sbjct: 541 GCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKM 600
Query: 601 KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANL 660
KDEE FYYPHN+DFRGRAYPM P+LNHLGSDLCRG+LEFAEGRP+ SGLRWLKIHLANL
Sbjct: 601 KDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANL 660
Query: 661 FAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRS 720
+AGGVDKLS DGR+AF ENHL+DIFDSADRPLEG RWWL AEDPFQ LA C++LTEALRS
Sbjct: 661 YAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRS 720
Query: 721 SSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIM 780
SPET +SHIPIHQDGSCNGLQHYAALGRD LGA AVNLV EKPADVYSGIA RVL+IM
Sbjct: 721 PSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIM 780
Query: 781 RRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAIS 840
RRDA +DP FP+ALRA+ L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER+
Sbjct: 781 RRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFG 840
Query: 841 DDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQ 900
D+ E+FG +CYAAK TL A+ EMF+AAR IM W G+CAKIIASEN+ VRWTTPLGLPVVQ
Sbjct: 841 DEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQ 900
Query: 901 PYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL 960
PY ++G L+KTSLQ L+LQ ETD+V+ +RQRTAFPPNF+HSLDGSHMMMTAVACK+AG+
Sbjct: 901 PYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGV 960
Query: 961 NFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGE 1014
FAGVHDS+WTHACDVD++N ILREKFVELY PILENLLE F++SFP LDFPPLPERG+
Sbjct: 961 CFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGD 1001
BLAST of Lcy09g003050 vs. TAIR 10
Match:
AT1G68990.1 (male gametophyte defective 3 )
HSP 1 Score: 1271.5 bits (3289), Expect = 0.0e+00
Identity = 621/907 (68.47%), Postives = 743/907 (81.92%), Query Frame = 0
Query: 126 KGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRL----KMAKGMGQG 185
+GY++ A+A+ STD ++++S DE+ EL+ EM KE +R + R ++ GMG
Sbjct: 71 EGYATAAQAIDSTDPEDESSGSDEVNELITEMEKETERIRKKARLAAIPPKRVIAGMGAQ 130
Query: 186 KYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISK 245
K+ MLK+RQV +ETE WE+A +E +E+L DMC+QKLAPNLPYMKSLFLGWFEP+ +AI
Sbjct: 131 KFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQD 190
Query: 246 EQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEH-GNARVVQAACVIGDA 305
+ + + K + YAP+ +QLPAD M+VITMHK+MGLLM E G ++V AA IG+A
Sbjct: 191 DLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGEA 250
Query: 306 IEQEVRIHKFLEKMKKKRHNKDNENDE----KPDSQIKEQERLRKKVTNLIKKQKLPAVR 365
+EQEVRI+ FL+K KK N E + KE E+ RK+VT L++K KL V+
Sbjct: 251 VEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQVK 310
Query: 366 QIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVM 425
+V+ D KPWGQ+A+ KVG+RLI+LL + AYIQPPA+Q DGPPDIRPAF+ +FRTV
Sbjct: 311 ALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTVT 370
Query: 426 KQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFV 485
+ K +SRR G IECDPLV+KGL+++ARHMVIPY+PML+PP NWTGYD+G H FLPS+V
Sbjct: 371 LENTK-TSRRYGCIECDPLVLKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYV 430
Query: 486 MRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLADLV 545
MRTHGAKQQR +KRTPK+QL PV+EALDTLGNTKW+INKK+LS+VDRIW +GGR+ LV
Sbjct: 431 MRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANGGRIGGLV 490
Query: 546 DQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFY 605
D++D+P+PE+P+ ED+ + W+W+ K K+N ERHSQRCDIELKL VARKMKDEEGFY
Sbjct: 491 DREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKMKDEEGFY 550
Query: 606 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDK 665
YPHN+DFRGRAYP+HPYLNHLGSDLCRGILEF EG+PL KSGLRWLKIH+ANL+AGGVDK
Sbjct: 551 YPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVDK 610
Query: 666 LSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPETFI 725
L+++ R+AF E+HLEDIFDS+DRPLEG+RWWLNAEDPFQ LAAC+NL+EALRS PE I
Sbjct: 611 LAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPEAAI 670
Query: 726 SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDAQKD 785
SHIPIHQDGSCNGLQHYAALGRDKLGA AVNLV EKPADVY+ IAARVL+IM++DA++D
Sbjct: 671 SHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIMQQDAEED 730
Query: 786 PATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFG 845
P TFP+A AK ++DQVDRKLVKQTVMTSVYGVTY GARDQIK+RLKER DDS F
Sbjct: 731 PETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSLTFH 790
Query: 846 CSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 905
SCYAAK TL AL EMFEAAR I SW GDCAKIIASEN V WTTPLGLPVVQPYRK GR
Sbjct: 791 ASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQPYRKPGR 850
Query: 906 HLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 965
HL+KT+LQ+LTL RETDKV+A+RQ TAF PNF+HSLDGSHMMMTAVAC +AGL+FAGVHD
Sbjct: 851 HLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGLSFAGVHD 910
Query: 966 SYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLKEVL 1024
S+WTHACDVD MN ILREKFVELYE PILENLLE FQ+SFP + FPPLPERG+FDL++VL
Sbjct: 911 SFWTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGDFDLRKVL 970
BLAST of Lcy09g003050 vs. TAIR 10
Match:
AT1G68990.2 (male gametophyte defective 3 )
HSP 1 Score: 1264.6 bits (3271), Expect = 0.0e+00
Identity = 621/914 (67.94%), Postives = 743/914 (81.29%), Query Frame = 0
Query: 126 KGYSSVAEAVSSTDVDEDASVDDEIQELLQEMSKEEKRQVEYRRRRL----KMAKGMGQG 185
+GY++ A+A+ STD ++++S DE+ EL+ EM KE +R + R ++ GMG
Sbjct: 71 EGYATAAQAIDSTDPEDESSGSDEVNELITEMEKETERIRKKARLAAIPPKRVIAGMGAQ 130
Query: 186 KYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPLHDAISK 245
K+ MLK+RQV +ETE WE+A +E +E+L DMC+QKLAPNLPYMKSLFLGWFEP+ +AI
Sbjct: 131 KFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQD 190
Query: 246 EQELIREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEH-GNARVVQAACVIGDA 305
+ + + K + YAP+ +QLPAD M+VITMHK+MGLLM E G ++V AA IG+A
Sbjct: 191 DLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGEA 250
Query: 306 IEQEVRIHKFLEKMKKKRHNKDNENDE----KPDSQIKEQERLRKKVTNLIKKQKLPAVR 365
+EQEVRI+ FL+K KK N E + KE E+ RK+VT L++K KL V+
Sbjct: 251 VEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQVK 310
Query: 366 QIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFRTVM 425
+V+ D KPWGQ+A+ KVG+RLI+LL + AYIQPPA+Q DGPPDIRPAF+ +FRTV
Sbjct: 311 ALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTVT 370
Query: 426 KQAIKNSSRRCGVIECDPLVIKGLERT-------ARHMVIPYMPMLVPPVNWTGYDKGGH 485
+ K +SRR G IECDPLV+KGL+++ ARHMVIPY+PML+PP NWTGYD+G H
Sbjct: 371 LENTK-TSRRYGCIECDPLVLKGLDKSVSRIVDYARHMVIPYLPMLIPPQNWTGYDQGAH 430
Query: 486 IFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSG 545
FLPS+VMRTHGAKQQR +KRTPK+QL PV+EALDTLGNTKW+INKK+LS+VDRIW +G
Sbjct: 431 FFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANG 490
Query: 546 GRLADLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKM 605
GR+ LVD++D+P+PE+P+ ED+ + W+W+ K K+N ERHSQRCDIELKL VARKM
Sbjct: 491 GRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKM 550
Query: 606 KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANL 665
KDEEGFYYPHN+DFRGRAYP+HPYLNHLGSDLCRGILEF EG+PL KSGLRWLKIH+ANL
Sbjct: 551 KDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANL 610
Query: 666 FAGGVDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRS 725
+AGGVDKL+++ R+AF E+HLEDIFDS+DRPLEG+RWWLNAEDPFQ LAAC+NL+EALRS
Sbjct: 611 YAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRS 670
Query: 726 SSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIM 785
PE ISHIPIHQDGSCNGLQHYAALGRDKLGA AVNLV EKPADVY+ IAARVL+IM
Sbjct: 671 PFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIM 730
Query: 786 RRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAIS 845
++DA++DP TFP+A AK ++DQVDRKLVKQTVMTSVYGVTY GARDQIK+RLKER
Sbjct: 731 QQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFE 790
Query: 846 DDSELFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQ 905
DDS F SCYAAK TL AL EMFEAAR I SW GDCAKIIASEN V WTTPLGLPVVQ
Sbjct: 791 DDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQ 850
Query: 906 PYRKLGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGL 965
PYRK GRHL+KT+LQ+LTL RETDKV+A+RQ TAF PNF+HSLDGSHMMMTAVAC +AGL
Sbjct: 851 PYRKPGRHLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGL 910
Query: 966 NFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGE 1024
+FAGVHDS+WTHACDVD MN ILREKFVELYE PILENLLE FQ+SFP + FPPLPERG+
Sbjct: 911 SFAGVHDSFWTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGD 970
BLAST of Lcy09g003050 vs. TAIR 10
Match:
AT2G24120.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 561/850 (66.00%), Postives = 685/850 (80.59%), Query Frame = 0
Query: 176 KGMGQGKYQMLKRRQVAIETEAWEQAVKEYKELLMDMCKQKLAPNLPYMKSLFLGWFEPL 235
K + + K+ L+RRQV ETEAWE+ V EY++L +MC++ LAPNLPY+K +FLGWF+PL
Sbjct: 152 KDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPL 211
Query: 236 HDAISKEQEL--IREGKNRTAYAPYFDQLPADMMSVITMHKLMGLLMMGHEHGNARVVQA 295
D I +EQ+L + K R AYAP+ + LPAD M+VI MHK+MGL+M GHE G +VVQA
Sbjct: 212 KDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCIQVVQA 271
Query: 296 ACVIGDAIEQEVRIHKFLEKMKKKRHNKDNENDEKPDSQIKEQERLRKKVTNLIKKQKLP 355
A IG AIEQEVRIH FL KR K+N D + ++KE++ LRK+V +LI+++++
Sbjct: 272 AVSIGIAIEQEVRIHNFL-----KRTRKNNAGDSQ--EELKEKQLLRKRVNSLIRRKRII 331
Query: 356 AVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQTAYIQPPADQLADGPPDIRPAFRHSFR 415
++VK ++ +KPWG+ +AK+GSRL+ELL + AY+QPP Q D P+ RPAFRH F+
Sbjct: 332 DALKVVK-SEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHRFK 391
Query: 416 TVMKQAIKNSSRRCGVIECDPLVIKGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLP 475
TV K RR GVIECD L++ GL+++A+HM+IPY+PMLVPP W GYDKGG++FLP
Sbjct: 392 TVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLFLP 451
Query: 476 SFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSVVDRIWTSGGRLA 535
S++MRTHG+K+Q+DA+K + VFEALDTLGNTKWR+N+ IL VV+R+W GG +A
Sbjct: 452 SYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGNIA 511
Query: 536 DLVDQDDIPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEE 595
LV+++D+P+PEKP SED L+ WKW + K N ERHS RCD+ELKL+VARKMKDEE
Sbjct: 512 GLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKDEE 571
Query: 596 GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGG 655
GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG LEFAEGRPL KSGL WLKIHLANL+AGG
Sbjct: 572 GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGG 631
Query: 656 VDKLSHDGRMAFIENHLEDIFDSADRPLEGRRWWLNAEDPFQFLAACMNLTEALRSSSPE 715
V+KLSHD R+AF+ENHL+DI DSA+ P+ G+RWWL AEDPFQ LAAC+ LT+AL+S SP
Sbjct: 632 VEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPY 691
Query: 716 TFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVVREKPADVYSGIAARVLEIMRRDA 775
+ ISH+PIHQDGSCNGLQHYAALGRD AAAVNLV EKPADVYS I+ RV EIM++D+
Sbjct: 692 SVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDS 751
Query: 776 QKDPATFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSE 835
KDP + P A AK LI QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+ I+D+
Sbjct: 752 SKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERM 811
Query: 836 LFGCSCYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRK 895
LF +CY+AK TL ALGE+FEAAR IMSWLGDCAKIIAS+N PVRW TPLGLPVVQPY +
Sbjct: 812 LFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCR 871
Query: 896 LGRHLIKTSLQILTLQRETDKVLAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAG 955
RHLI+TSLQ+L LQRE + V ++QRTAFPPNFVHSLDG+HMMMTAVAC++AGLNFAG
Sbjct: 872 SERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAG 931
Query: 956 VHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQRSFPTLDFPPLPERGEFDLK 1015
VHDSYWTHACDVD MNRILREKFVELY TPILE+LL+ FQ S+P L FPP+P+RG+FDLK
Sbjct: 932 VHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLK 991
Query: 1016 EVLESPYFFN 1024
EVL+S YFFN
Sbjct: 992 EVLKSQYFFN 993
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q8L6J3 | 0.0e+00 | 72.18 | DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum... | [more] |
| Q8VWF8 | 0.0e+00 | 72.79 | DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestr... | [more] |
| Q8L6J5 | 0.0e+00 | 70.99 | DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RP... | [more] |
| Q93Y94 | 0.0e+00 | 70.60 | DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=... | [more] |
| Q9LFV6 | 0.0e+00 | 66.25 | DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Arabidopsis thalia... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1JUF5 | 0.0e+00 | 90.36 | DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111489816 PE=3 SV=... | [more] |
| A0A6J1FHA8 | 0.0e+00 | 89.97 | DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111445458 PE=3 S... | [more] |
| A0A6J1C0Y4 | 0.0e+00 | 90.96 | DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111006419 PE=3 ... | [more] |
| A0A0A0KXM5 | 0.0e+00 | 83.17 | DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G642180 PE=3 SV=1 | [more] |
| A0A1S3CBC4 | 0.0e+00 | 82.26 | DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103498556 PE=3 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022993982.1 | 0.0e+00 | 90.36 | DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Cucurbita maxim... | [more] |
| XP_022939617.1 | 0.0e+00 | 89.97 | DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Cucurbita mosch... | [more] |
| XP_022134053.1 | 0.0e+00 | 90.96 | DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Momordica chara... | [more] |
| XP_038890080.1 | 0.0e+00 | 90.56 | DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like isoform X1 [Beni... | [more] |
| XP_023551171.1 | 0.0e+00 | 90.56 | DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like [Cucurbita pepo... | [more] |
