Homology
BLAST of Lcy09g003040 vs. ExPASy Swiss-Prot
Match:
Q84J46 (Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana OX=3702 GN=EMB2076 PE=2 SV=1)
HSP 1 Score: 501.9 bits (1291), Expect = 1.0e-140
Identity = 255/467 (54.60%), Postives = 335/467 (71.73%), Query Frame = 0
Query: 120 MAHQAEPSFQSEDVNQSKMLEVEALVNDSKVHFLEETDKVMLSKRILILSRKNKVRSALE 179
++ + + SF E+V LE + + +++HFLEE ++ LSKR+ LSR +KVRSALE
Sbjct: 69 VSSELDSSFNGENVVCGLELEEKTAGDRNRIHFLEERNEETLSKRLRKLSRLDKVRSALE 128
Query: 180 LFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVAG 239
LF SM+ GL P+ HA NS L+CLLRNG +FEFM+ + TGHTYSL+LKAVA
Sbjct: 129 LFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSLMLKAVAE 188
Query: 240 TRGFLSALEMFKAWEHEYDLKQ-FDAIVYNTMISVCGKENNWVEAERTWRLMEASGCRAT 299
+G SAL MF+ E E + FD ++YNT IS+CG+ NN E ER WR+M+ G T
Sbjct: 189 VKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGT 248
Query: 300 RITYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMWDFALRVFQ 359
ITYSLL+S FVRC ++ELA+D Y +MV N D M A+I A +KE WD AL++FQ
Sbjct: 249 EITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQ 308
Query: 360 AMLKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNALLGALYQAN 419
+MLK G++PN VA N LI++LGKA KV L F +Y+V+KS+GH D YTWNALL ALY+AN
Sbjct: 309 SMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKAN 368
Query: 420 RYNDAIHLYEFVKREK-TQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLLISASSY 479
RY D + L++ ++ E LN ++YNT ++SC KLG W++A+++L+EME SGL +S SSY
Sbjct: 369 RYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSY 428
Query: 480 NIVISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRSCIWGSLWDEVELLLNKSAP 539
N+VISACE +RK ++AL VYE M + P+TFT+LSL+RSCIWGSLWDEVE +L K P
Sbjct: 429 NLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEP 488
Query: 540 DVSVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNL 585
DVS+YNA I GMCLR + AK+LY KMRE G++PDGKTRA+MLQNL
Sbjct: 489 DVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNL 535
BLAST of Lcy09g003040 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 3.3e-30
Identity = 103/439 (23.46%), Postives = 211/439 (48.06%), Query Frame = 0
Query: 157 DKVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIF 216
D +++ I +L ++ +V SA +F +Q G +++ SL++ +G + + + +F
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 217 EFMKSNKLS-TGHTYSLILKAVAGTRG-----FLSALEMFKAWEHEYDLKQFDAIVYNTM 276
+ M+ + T TY++IL V G G S +E K+ D DA YNT+
Sbjct: 232 KKMEEDGCKPTLITYNVILN-VFGKMGTPWNKITSLVEKMKS-----DGIAPDAYTYNTL 291
Query: 277 ISVCGKENNWVEAERTWRLMEASGCRATRITYSLLISTFVRCNQNELAIDTYVKMVQNYF 336
I+ C + + EA + + M+A+G ++TY+ L+ + + ++ + A+ +MV N F
Sbjct: 292 ITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 351
Query: 337 KPGNDMMQAIIGASSKEGMWDFALRVFQAMLKCGLQPNSVAFNALIHALGKAKKVNLAFS 396
P ++I A +++GM D A+ + M + G +P+ + L+ +A KV A S
Sbjct: 352 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 411
Query: 397 IYNVMKSMGHPSDVYTWNALLGALYQANRYNDAIHLYEFVKREKTQLNIHIYNTILMSCS 456
I+ M++ G ++ T+NA + ++ + + +++ + +I +NT+L
Sbjct: 412 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 471
Query: 457 KLGLWDRALQILWEMEASGLLISASSYNIVISACEMARKPEIALQVYERMIHQKHAPDTF 516
+ G+ + EM+ +G + ++N +ISA E A+ VY RM+ PD
Sbjct: 472 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 531
Query: 517 THLSLIRSCIWGSLWDEVELLL-----NKSAPDVSVYNAVIQGMCLRGKTDLAKKLYTKM 576
T+ +++ + G +W++ E +L + P+ Y +++ + L L ++
Sbjct: 532 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 591
Query: 577 RESGIQPDGKTRALMLQNL 585
I+P RA++L+ L
Sbjct: 592 YSGVIEP----RAVLLKTL 600
BLAST of Lcy09g003040 vs. ExPASy Swiss-Prot
Match:
Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 2.3e-28
Identity = 105/419 (25.06%), Postives = 196/419 (46.78%), Query Frame = 0
Query: 173 KVRSALELFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTG-HTYS 232
K A++LFR M + LP++ N L + + + ++ L + + M+S ++ +T S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 233 LILKAVAGTRGFLSALE-MFKAWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERTWRLM 292
+++ R A M K + Y+ D +++NT+++ E EA M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEP---DTVIFNTLLNGLCLECRVSEALELVDRM 187
Query: 293 EASGCRATRITYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMW 352
G + T IT + L++ + A+ +MV+ F+P ++ K G
Sbjct: 188 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 247
Query: 353 DFALRVFQAMLKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNAL 412
A+ + + M + ++ ++V ++ +I L K ++ AF+++N M+ G +D+ T+N L
Sbjct: 248 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 307
Query: 413 LGALYQANRYNDAIHLYEFVKREKTQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGL 472
+G A R++D L + + K N+ ++ ++ S K G A Q+L EM G+
Sbjct: 308 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 367
Query: 473 LISASSYNIVISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRS-CIWGSLWDEVE 532
+ +YN +I + E A+Q+ + MI + PD T LI C + D +E
Sbjct: 368 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 427
Query: 533 LLLNKSAPDV----SVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNL 585
L S V YN ++QG C GK ++AKKL+ +M ++PD + ++L L
Sbjct: 428 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
BLAST of Lcy09g003040 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 3.1e-28
Identity = 106/427 (24.82%), Postives = 186/427 (43.56%), Query Frame = 0
Query: 157 DKVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIF 216
+ V+ I LS+ N+V AL+L M L G +P N ++ L + ++ ++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 217 EFMKSNKLSTGH-TYSLILKAVAGTRGFLSALEMFKAWEHEYDLKQFDAIVYNTMISVCG 276
M + TY ++ + +A ++F Y + + + +++NT+I
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF------YRIPKPEIVIFNTLIHGFV 370
Query: 277 KENNWVEAERTWRLMEAS-GCRATRITYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGN 336
+A+ M S G TY+ LI + + LA++ M KP
Sbjct: 371 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 430
Query: 337 DMMQAIIGASSKEGMWDFALRVFQAMLKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNV 396
++ K G D A V M GL+PN+V FN LI A K ++ A I+
Sbjct: 431 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 490
Query: 397 MKSMGHPSDVYTWNALLGALYQANRYNDAIHLYEFVKREKTQLNIHIYNTILMSCSKLGL 456
M G DVYT+N+L+ L + + A+ L + E N YNT++ + + G
Sbjct: 491 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 550
Query: 457 WDRALQILWEMEASGLLISASSYNIVISACEMARKPEIALQVYERMIHQKHAPDTFTHLS 516
A +++ EM G + +YN +I A + + A ++E+M+ HAP +
Sbjct: 551 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 610
Query: 517 LIRSCIWGSLWDEV-----ELLLNKSAPDVSVYNAVIQGMCLRGKTDLAKKLYTKMRESG 576
LI + +E E++L S PD+ +N++I G+C G+ + ++ K++ G
Sbjct: 611 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 670
BLAST of Lcy09g003040 vs. ExPASy Swiss-Prot
Match:
Q9M907 (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN=At3g06920 PE=2 SV=1)
HSP 1 Score: 124.4 bits (311), Expect = 4.4e-27
Identity = 78/315 (24.76%), Postives = 147/315 (46.67%), Query Frame = 0
Query: 270 MISVCGKENNWVEAERTWRLMEASGCRATRITYSLLISTFVRCNQNELAIDTYVKMVQNY 329
M+ C K N E ++M R Y+ LI F N +++ + + +M +
Sbjct: 139 MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198
Query: 330 FKPGNDMMQAIIGASSKEGMWDFALRVFQAMLKCGLQPNSVAFNALIHALGKAKKVNLAF 389
++P + +I +KEG D AL + M L + V +N I + GK KV++A+
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258
Query: 390 SIYNVMKSMGHPSDVYTWNALLGALYQANRYNDAIHLYEFVKREKTQLNIHIYNTILMSC 449
++ +++ G D T+ +++G L +ANR ++A+ ++E +++ + + YNT++M
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY 318
Query: 450 SKLGLWDRALQILWEMEASGLLISASSYNIVISACEMARKPEIALQVYERMIHQKHAPDT 509
G +D A +L A G + S +YN +++ K + AL+V+E M
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM--------- 378
Query: 510 FTHLSLIRSCIWGSLWDEVELLLNKSAPDVSVYNAVIQGMCLRGKTDLAKKLYTKMRESG 569
+AP++S YN +I +C GK D A +L M+++G
Sbjct: 379 ----------------------KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 422
Query: 570 IQPDGKTRALMLQNL 585
+ P+ +T +M+ L
Sbjct: 439 LFPNVRTVNIMVDRL 422
BLAST of Lcy09g003040 vs. ExPASy TrEMBL
Match:
A0A1S3C9M1 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498557 PE=4 SV=1)
HSP 1 Score: 1013.1 bits (2618), Expect = 5.0e-292
Identity = 508/611 (83.14%), Postives = 540/611 (88.38%), Query Frame = 0
Query: 1 MRGLLGNPSPTLIFSNELNYQHDSYYPVSCVDKHFHKCINVNPGLKSCIRCTVTCGGNVV 60
MRG+LGN SPTLI NE NYQHDSYYP DKH +CINVNP LKSC+RCT+ GN V
Sbjct: 1 MRGVLGNSSPTLILLNEFNYQHDSYYPFRREDKHLRQCINVNPMLKSCMRCTIMYDGNAV 60
Query: 61 SMLSISIPRLNSVVQSTRAMKFRTGVGTLLNCEEDEPTELAID-EGVEESSEWKLPPWGD 120
SML +S PRLN VVQS R M+FRTGVGTLLNC EDE EL ID EGVE S EWKLPPWGD
Sbjct: 61 SMLPMSTPRLNLVVQSIRGMQFRTGVGTLLNCGEDEAIELVIDEEGVESSREWKLPPWGD 120
Query: 121 MAHQAEPSFQSEDVNQSKMLEVEALVNDSKVHFLEETDKVMLSKRILILSRKNKVRSALE 180
M HQ E +FQSEDVN K+LE EAL N+SKVHFLEETDKV+LSKRILILSRKNKVRSALE
Sbjct: 121 MTHQDEAAFQSEDVNLPKILEGEALENESKVHFLEETDKVLLSKRILILSRKNKVRSALE 180
Query: 181 LFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVAG 240
LFRSMQLAG+LP+LHALNSLLACLLRNGLF DGLRIFEFMK N+LSTGHTYSL+LKAVA
Sbjct: 181 LFRSMQLAGVLPNLHALNSLLACLLRNGLFADGLRIFEFMKLNELSTGHTYSLVLKAVAN 240
Query: 241 TRGFLSALEMFKAWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERTWRLMEASGCRATR 300
GFLSALEMFKAWEH+Y L QFDAIVYNTMIS+CGK+NNWVEAERTWRLME +GC AT
Sbjct: 241 AHGFLSALEMFKAWEHKYVLTQFDAIVYNTMISICGKDNNWVEAERTWRLMEKNGCTATH 300
Query: 301 ITYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMWDFALRVFQA 360
ITYSLL+STFVRCNQNELAID YVKMVQ+ FKPGND MQAIIGASSKEG WDFAL VFQ
Sbjct: 301 ITYSLLVSTFVRCNQNELAIDAYVKMVQSSFKPGNDTMQAIIGASSKEGKWDFALGVFQD 360
Query: 361 MLKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNALLGALYQANR 420
MLKCGLQPNSV+FNALI+ALGKAK+V LAFSIYNVMKSMGH DVYTWNALLGALY+ANR
Sbjct: 361 MLKCGLQPNSVSFNALINALGKAKEVTLAFSIYNVMKSMGHSPDVYTWNALLGALYKANR 420
Query: 421 YNDAIHLYEFVKR-EKTQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLLISASSYN 480
YNDAIHL+ FVKR EK QLNIHIYNTILM CSKLGLW+RALQILWEME SGLLIS +SYN
Sbjct: 421 YNDAIHLFGFVKREEKAQLNIHIYNTILMCCSKLGLWERALQILWEMEVSGLLISTTSYN 480
Query: 481 IVISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRSCIWGSLWDEVELLLNKSAPD 540
IV++ACE ARKPEIALQVYERM+HQKH PDTFTHLSLIR CIWGSLWDEVELLLNKS PD
Sbjct: 481 IVLTACETARKPEIALQVYERMVHQKHTPDTFTHLSLIRCCIWGSLWDEVELLLNKSGPD 540
Query: 541 VSVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNLPNDPARVKNRWVSR 600
VSVYN VIQGMCLRGKTDLAKKLYTKMRE+ IQ DGKTRALMLQNLP DPAR+KNRW S
Sbjct: 541 VSVYNVVIQGMCLRGKTDLAKKLYTKMRENSIQSDGKTRALMLQNLPKDPARLKNRWASG 600
Query: 601 FKKRHRHYHHR 610
FKKR R YHHR
Sbjct: 601 FKKRRRRYHHR 611
BLAST of Lcy09g003040 vs. ExPASy TrEMBL
Match:
A0A6J1BY07 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006743 PE=4 SV=1)
HSP 1 Score: 1007.7 bits (2604), Expect = 2.1e-290
Identity = 499/609 (81.94%), Postives = 542/609 (89.00%), Query Frame = 0
Query: 1 MRGLLGNPSPTLIFSNELNYQHDSYYPVSCVDKHFHKCINVNPGLKSCIRCTVTCGGNVV 60
MRG+L NPSPTL+ SNELNYQ DSYYPV+ + H+C NVN LKS +RC++ GNV+
Sbjct: 1 MRGVLINPSPTLLLSNELNYQQDSYYPVTYAHRLLHQCRNVNSFLKSRMRCSIIYRGNVI 60
Query: 61 SMLSISIPRLNSVVQSTRAMKFRTGVGTLLNCEEDEPTELAIDEGVEESSEWKLPPWGDM 120
SMLS+S+PRLN V++STRAM+F TGVGTLLNCEEDE EL DE ES EWK PPWGD+
Sbjct: 61 SMLSMSVPRLNLVIRSTRAMEFSTGVGTLLNCEEDEAIELVTDEEGLESFEWKSPPWGDI 120
Query: 121 AHQAEPSFQSEDVNQSKMLEVEALVNDSKVHFLEETDKVMLSKRILILSRKNKVRSALEL 180
E SFQSED NQ +MLE EA +N SKVHFLEETD+VMLSKRILILSRKNKVRSA+EL
Sbjct: 121 VKHDESSFQSEDTNQPRMLEAEAFINGSKVHFLEETDEVMLSKRILILSRKNKVRSAMEL 180
Query: 181 FRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVAGT 240
FRSMQLAGLLPSLHALNSLLACLLRN LFDDGLRIF MK+NKLSTGHTYSLILKAVA
Sbjct: 181 FRSMQLAGLLPSLHALNSLLACLLRNELFDDGLRIFALMKTNKLSTGHTYSLILKAVADA 240
Query: 241 RGFLSALEMFKAWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERTWRLMEASGCRATRI 300
RGFLSALEMFKAWE EYD+K FD IVYNTMISVCGKENNWVEAERTWRLMEA+GC ATRI
Sbjct: 241 RGFLSALEMFKAWEQEYDVKHFDPIVYNTMISVCGKENNWVEAERTWRLMEANGCGATRI 300
Query: 301 TYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMWDFALRVFQAM 360
TY LL+STFVRC QNELAIDTYVKMVQN+FKPGND MQ IIGAS KEG WDFALRVF+ M
Sbjct: 301 TYCLLVSTFVRCKQNELAIDTYVKMVQNHFKPGNDTMQTIIGASLKEGKWDFALRVFEDM 360
Query: 361 LKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNALLGALYQANRY 420
LKCGLQPNSVAFNALIHALGKAKKV LAF++YN+MKSMGHP D YTWNALLG+LY+ANRY
Sbjct: 361 LKCGLQPNSVAFNALIHALGKAKKVTLAFNVYNMMKSMGHPPDAYTWNALLGSLYEANRY 420
Query: 421 NDAIHLYEFVKRE-KTQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLLISASSYNI 480
NDAI L+EFVKRE K QLNIH+YNTILMSCSKLGLWDR +QILWEMEASGLLIS +SYNI
Sbjct: 421 NDAIRLFEFVKREDKPQLNIHVYNTILMSCSKLGLWDRTIQILWEMEASGLLISTASYNI 480
Query: 481 VISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRSCIWGSLWDEVELLLNKSAPDV 540
VISACEMARKP+IALQVYERMIHQKH PDTFTHLSL+R CIWGSLWDEVE+LLNKSAP+V
Sbjct: 481 VISACEMARKPKIALQVYERMIHQKHTPDTFTHLSLVRCCIWGSLWDEVEVLLNKSAPNV 540
Query: 541 SVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNLPNDPARVKNRWVSRF 600
SVYNAVIQGMCLRGKTDLAK+LY+KMRE+GIQ DGKTRALMLQNLP DPAR NRW SRF
Sbjct: 541 SVYNAVIQGMCLRGKTDLAKRLYSKMRENGIQADGKTRALMLQNLPKDPARFNNRWASRF 600
Query: 601 KKRHRHYHH 609
+KR+RHYHH
Sbjct: 601 RKRNRHYHH 609
BLAST of Lcy09g003040 vs. ExPASy TrEMBL
Match:
A0A6J1C280 (pentatricopeptide repeat-containing protein At3g29290 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006743 PE=4 SV=1)
HSP 1 Score: 1007.7 bits (2604), Expect = 2.1e-290
Identity = 499/609 (81.94%), Postives = 542/609 (89.00%), Query Frame = 0
Query: 1 MRGLLGNPSPTLIFSNELNYQHDSYYPVSCVDKHFHKCINVNPGLKSCIRCTVTCGGNVV 60
MRG+L NPSPTL+ SNELNYQ DSYYPV+ + H+C NVN LKS +RC++ GNV+
Sbjct: 1 MRGVLINPSPTLLLSNELNYQQDSYYPVTYAHRLLHQCRNVNSFLKSRMRCSIIYRGNVI 60
Query: 61 SMLSISIPRLNSVVQSTRAMKFRTGVGTLLNCEEDEPTELAIDEGVEESSEWKLPPWGDM 120
SMLS+S+PRLN V++STRAM+F TGVGTLLNCEEDE EL DE ES EWK PPWGD+
Sbjct: 61 SMLSMSVPRLNLVIRSTRAMEFSTGVGTLLNCEEDEAIELVTDEEGLESFEWKSPPWGDI 120
Query: 121 AHQAEPSFQSEDVNQSKMLEVEALVNDSKVHFLEETDKVMLSKRILILSRKNKVRSALEL 180
E SFQSED NQ +MLE EA +N SKVHFLEETD+VMLSKRILILSRKNKVRSA+EL
Sbjct: 121 VKHDESSFQSEDTNQPRMLEAEAFINGSKVHFLEETDEVMLSKRILILSRKNKVRSAMEL 180
Query: 181 FRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVAGT 240
FRSMQLAGLLPSLHALNSLLACLLRN LFDDGLRIF MK+NKLSTGHTYSLILKAVA
Sbjct: 181 FRSMQLAGLLPSLHALNSLLACLLRNELFDDGLRIFALMKTNKLSTGHTYSLILKAVADA 240
Query: 241 RGFLSALEMFKAWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERTWRLMEASGCRATRI 300
RGFLSALEMFKAWE EYD+K FD IVYNTMISVCGKENNWVEAERTWRLMEA+GC ATRI
Sbjct: 241 RGFLSALEMFKAWEQEYDVKHFDPIVYNTMISVCGKENNWVEAERTWRLMEANGCGATRI 300
Query: 301 TYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMWDFALRVFQAM 360
TY LL+STFVRC QNELAIDTYVKMVQN+FKPGND MQ IIGAS KEG WDFALRVF+ M
Sbjct: 301 TYCLLVSTFVRCKQNELAIDTYVKMVQNHFKPGNDTMQTIIGASLKEGKWDFALRVFEDM 360
Query: 361 LKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNALLGALYQANRY 420
LKCGLQPNSVAFNALIHALGKAKKV LAF++YN+MKSMGHP D YTWNALLG+LY+ANRY
Sbjct: 361 LKCGLQPNSVAFNALIHALGKAKKVTLAFNVYNMMKSMGHPPDAYTWNALLGSLYEANRY 420
Query: 421 NDAIHLYEFVKRE-KTQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLLISASSYNI 480
NDAI L+EFVKRE K QLNIH+YNTILMSCSKLGLWDR +QILWEMEASGLLIS +SYNI
Sbjct: 421 NDAIRLFEFVKREDKPQLNIHVYNTILMSCSKLGLWDRTIQILWEMEASGLLISTASYNI 480
Query: 481 VISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRSCIWGSLWDEVELLLNKSAPDV 540
VISACEMARKP+IALQVYERMIHQKH PDTFTHLSL+R CIWGSLWDEVE+LLNKSAP+V
Sbjct: 481 VISACEMARKPKIALQVYERMIHQKHTPDTFTHLSLVRCCIWGSLWDEVEVLLNKSAPNV 540
Query: 541 SVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNLPNDPARVKNRWVSRF 600
SVYNAVIQGMCLRGKTDLAK+LY+KMRE+GIQ DGKTRALMLQNLP DPAR NRW SRF
Sbjct: 541 SVYNAVIQGMCLRGKTDLAKRLYSKMRENGIQADGKTRALMLQNLPKDPARFNNRWASRF 600
Query: 601 KKRHRHYHH 609
+KR+RHYHH
Sbjct: 601 RKRNRHYHH 609
BLAST of Lcy09g003040 vs. ExPASy TrEMBL
Match:
A0A0A0KVV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G642190 PE=4 SV=1)
HSP 1 Score: 994.6 bits (2570), Expect = 1.8e-286
Identity = 501/610 (82.13%), Postives = 536/610 (87.87%), Query Frame = 0
Query: 1 MRGLLGNPSPTLIFSNELNYQHDSYYPVSCVDKHFHKCINVNPGLKSCIRCTVTCGGNVV 60
MRG+LGN SPTL+ NE NYQHDS+YP DK +CINVNP LKS +RCT+ GN V
Sbjct: 1 MRGVLGNSSPTLVLLNEFNYQHDSHYPFRREDKRLRQCINVNPMLKSWMRCTIMYDGNAV 60
Query: 61 SMLSISIPRLNSVVQSTRAMKFRTGVGTLLNCEEDEPTELAIDEGVEESS-EWKLPPWGD 120
S+L S PRLN VVQSTR +NC EDE EL IDEGVEESS EWKLPPWGD
Sbjct: 61 SVLPRSTPRLNLVVQSTRG----------VNCGEDEAIELVIDEGVEESSREWKLPPWGD 120
Query: 121 MAHQAEPSFQSEDVNQSKMLEVEALVNDSKVHFLEETDKVMLSKRILILSRKNKVRSALE 180
+AHQ E +FQSEDVNQ K+LE + L N+SK+HFLEETDKVMLSKRILILSRKNKVRSALE
Sbjct: 121 IAHQDEATFQSEDVNQPKILEGKVLENESKLHFLEETDKVMLSKRILILSRKNKVRSALE 180
Query: 181 LFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVAG 240
L RSMQLAGLLPSLHALNSLLACLLRN LF DGLRIFEFMK N+LSTGHTYSL+LKAVA
Sbjct: 181 LLRSMQLAGLLPSLHALNSLLACLLRNELFADGLRIFEFMKLNELSTGHTYSLVLKAVAN 240
Query: 241 TRGFLSALEMFKAWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERTWRLMEASGCRATR 300
GFLSALEMFKAWEH+ L QFDAIVYNTMIS+CGK+NNWVEAERTWRLME +GC ATR
Sbjct: 241 AHGFLSALEMFKAWEHQCVLAQFDAIVYNTMISICGKDNNWVEAERTWRLMEKNGCSATR 300
Query: 301 ITYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMWDFALRVFQA 360
ITYSLL+STFVRCNQNELAIDTYVKMVQN FKPGND MQAIIGASSKEG WDFALRVFQ
Sbjct: 301 ITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQAIIGASSKEGKWDFALRVFQD 360
Query: 361 MLKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNALLGALYQANR 420
MLKCGLQPNSV+FNALI+ALGKAK+V LAFS+YNVMKSMGH DVYTWNALLGALY+ANR
Sbjct: 361 MLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKSMGHSPDVYTWNALLGALYKANR 420
Query: 421 YNDAIHLYEFVKREKTQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLLISASSYNI 480
Y+DAIHL+EFVKREK QLNIHIYNTILMSCSKLGLW+RA+QILWEME SGL IS SSYNI
Sbjct: 421 YSDAIHLFEFVKREKVQLNIHIYNTILMSCSKLGLWERAVQILWEMEVSGLSISTSSYNI 480
Query: 481 VISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRSCIWGSLWDEVELLLNKSAPDV 540
V++ACEMARKPEIALQVYERM+HQKH PDTFTHLSLIR CIWGSLWDEVELLLNKSAPDV
Sbjct: 481 VMTACEMARKPEIALQVYERMVHQKHTPDTFTHLSLIRCCIWGSLWDEVELLLNKSAPDV 540
Query: 541 SVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNLPNDPARVKNRWVSRF 600
SVYN VIQGMCLRGK+DLAKKLYTKMRE+GIQPDGKTRALMLQNLP DPAR KNRW S F
Sbjct: 541 SVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTRALMLQNLPKDPARRKNRWASGF 600
Query: 601 KKRHRHYHHR 610
KKR RHYHHR
Sbjct: 601 KKRQRHYHHR 600
BLAST of Lcy09g003040 vs. ExPASy TrEMBL
Match:
A0A6J1JSM4 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487480 PE=4 SV=1)
HSP 1 Score: 952.2 bits (2460), Expect = 1.0e-273
Identity = 495/612 (80.88%), Postives = 529/612 (86.44%), Query Frame = 0
Query: 1 MRGLLGNPSPTLIFSNELNYQHDSYYPVSCVDKHFHKCINVNPGLKSCIRCTVTCGGNVV 60
MRGLL N PTLI SNELNYQ S YPVSC KHFH V P LKSCIR +T GGNV
Sbjct: 1 MRGLLIN--PTLILSNELNYQLHSCYPVSCAHKHFH----VIPELKSCIRRRITHGGNVA 60
Query: 61 SMLSISIPRLNSVVQSTRAMKFRTGVGTLLNCEEDEPTELAIDEGVEESS-EWKLPPWGD 120
SM S+SIPRLN VV+ST+ ++FRT CEEDE L +DEGVEESS EWK PPWG+
Sbjct: 61 SMSSMSIPRLNFVVRSTKFLEFRT-------CEEDEAISLVVDEGVEESSREWKSPPWGE 120
Query: 121 MAHQAEPSFQSEDVNQSKMLEVEALVNDSKVHFLEETDKVMLSKRILILSRKNKVRSALE 180
+ +Q EP FQSEDVNQS++LE E LV+D KV+FLEETD+VMLSKRILILSRKNKVRSA+E
Sbjct: 121 VKNQDEPIFQSEDVNQSEVLEGEGLVSDRKVYFLEETDEVMLSKRILILSRKNKVRSAME 180
Query: 181 LFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVAG 240
LFRSM LAGLLPS HA NSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVA
Sbjct: 181 LFRSMHLAGLLPSFHASNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVAD 240
Query: 241 TRGFLSALEMFKAWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERTWRLMEASGCRATR 300
T GFLSALEMF+ WEHEYDLKQFDAIVYN MISVCGKENNWVEAER WRLME +GC AT
Sbjct: 241 THGFLSALEMFRTWEHEYDLKQFDAIVYNMMISVCGKENNWVEAERIWRLMEENGCSATH 300
Query: 301 ITYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMWDFALRVFQA 360
+TYSLL+ST+VRCNQNELAID YVKMVQN +KP ND MQAIIGASS+EG WDFALRVFQ
Sbjct: 301 LTYSLLVSTYVRCNQNELAIDIYVKMVQNCYKPANDTMQAIIGASSREGRWDFALRVFQE 360
Query: 361 MLKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNALLGALYQANR 420
MLKCGL+PNSVAFNALI+ALGKA +V LAFSIYN MKSMGH DVYTW ALLGALY+ANR
Sbjct: 361 MLKCGLEPNSVAFNALINALGKANEVTLAFSIYNRMKSMGHSPDVYTWKALLGALYKANR 420
Query: 421 YNDAIHLYEFVKR-EKTQLNIHIYNTILMSCSKLGLWDRALQILWEME-ASGLLISASSY 480
YNDAI L+EFVKR EK QLNIHIYNT+L+SCSKLGLWDRALQILWEME ASG L+SASSY
Sbjct: 421 YNDAIRLFEFVKREEKAQLNIHIYNTVLLSCSKLGLWDRALQILWEMEAASGCLVSASSY 480
Query: 481 NIVISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRSCIWGSLWDEVELLLNKSAP 540
NIVISACEMARKPEIAL+VYERMIHQK PDTFT LSLIRSCIWGSLWDEVELLL+KSA
Sbjct: 481 NIVISACEMARKPEIALRVYERMIHQKLTPDTFTLLSLIRSCIWGSLWDEVELLLSKSAH 540
Query: 541 DVSVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNLPNDPARVKNRWVS 600
D SVYNAVIQGMCLRGKTDLAKK YTKM E GIQPDGKTRALMLQ LP D A +KNR S
Sbjct: 541 DASVYNAVIQGMCLRGKTDLAKKFYTKMHEIGIQPDGKTRALMLQTLPKDRAGLKNRLAS 599
Query: 601 RFKKRHRHYHHR 610
RFKKRHRHYHHR
Sbjct: 601 RFKKRHRHYHHR 599
BLAST of Lcy09g003040 vs. NCBI nr
Match:
XP_038891011.1 (pentatricopeptide repeat-containing protein At3g29290 [Benincasa hispida] >XP_038891012.1 pentatricopeptide repeat-containing protein At3g29290 [Benincasa hispida])
HSP 1 Score: 1048.1 bits (2709), Expect = 2.9e-302
Identity = 524/611 (85.76%), Postives = 552/611 (90.34%), Query Frame = 0
Query: 1 MRGLLGNPSPTLIFSNELNYQHDSYYPVSCVDKHFHKCINVNPGLKSCIRCTVTCGGNVV 60
MRG +GNPSPTLI NE +YQHDSYYP S +K CINVNP KSCIRCT+T GN V
Sbjct: 1 MRGFVGNPSPTLILLNEFHYQHDSYYPFSWTEKRLRPCINVNPVSKSCIRCTITYKGNAV 60
Query: 61 SMLSISIPRLNSVVQSTRAMKFRTGVGTLLNCEEDEPTELAID-EGVEESS-EWKLPPWG 120
SML +S PRLN +VQSTR M+FRT VGTLLNC EDE +L ID EGV ESS EWKLPPWG
Sbjct: 61 SMLLMSTPRLNLMVQSTRGMEFRTCVGTLLNCGEDEAIDLVIDEEGVGESSREWKLPPWG 120
Query: 121 DMAHQAEPSFQSEDVNQSKMLEVEALVNDSKVHFLEETDKVMLSKRILILSRKNKVRSAL 180
DMAHQ EP+FQSED NQSK+LE E L NDSKVHFLEETDKVMLSKR+LILSRKNKVRSAL
Sbjct: 121 DMAHQDEPTFQSEDANQSKILEGEPLENDSKVHFLEETDKVMLSKRLLILSRKNKVRSAL 180
Query: 181 ELFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVA 240
ELFRS+QLA LLPSLHALNSLLACLLR GLFDDGLRIFEFMKSN+L TGHTYSL+LKAVA
Sbjct: 181 ELFRSLQLAALLPSLHALNSLLACLLRKGLFDDGLRIFEFMKSNELLTGHTYSLVLKAVA 240
Query: 241 GTRGFLSALEMFKAWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERTWRLMEASGCRAT 300
GFLSALEMFKAWEH+YDL QFDA+VYNTMIS+CGK+NNWVEAERTWRLME +GC AT
Sbjct: 241 NAHGFLSALEMFKAWEHKYDLTQFDAVVYNTMISICGKDNNWVEAERTWRLMEENGCSAT 300
Query: 301 RITYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMWDFALRVFQ 360
ITY+LL+STFVRCNQNELAIDTYVKMVQN FKPGND MQAIIGASSKEG WDFALRVF
Sbjct: 301 HITYTLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQAIIGASSKEGKWDFALRVFH 360
Query: 361 AMLKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNALLGALYQAN 420
MLKCGLQPNSVAFNALI+ALG AK+V LAFSIYNVMKSMGH DVYTWNALLGALY+AN
Sbjct: 361 DMLKCGLQPNSVAFNALINALGNAKEVTLAFSIYNVMKSMGHSPDVYTWNALLGALYKAN 420
Query: 421 RYNDAIHLYEFVKREKTQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLLISASSYN 480
RYNDAIHL+EFVKREK QLNIHIYNTILMSCSKLGLWDRALQILWEMEASGL ISASSYN
Sbjct: 421 RYNDAIHLFEFVKREKAQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLAISASSYN 480
Query: 481 IVISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRSCIWGSLWDEVELLLNKSAPD 540
IVI+ACEMARKPEIALQVYERMIHQKH PDTFTHLSLIR CIWGSLWDEVELLLNKSAPD
Sbjct: 481 IVITACEMARKPEIALQVYERMIHQKHTPDTFTHLSLIRCCIWGSLWDEVELLLNKSAPD 540
Query: 541 VSVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNLPNDPARVKNRWVSR 600
VSVYNAVIQGMCLRGKTDLAKKLYTKMRE+GIQPDGKTRALMLQNLP DPAR+KNRW S
Sbjct: 541 VSVYNAVIQGMCLRGKTDLAKKLYTKMRENGIQPDGKTRALMLQNLPKDPARLKNRWASG 600
Query: 601 FKKRHRHYHHR 610
FKKRHRHYHHR
Sbjct: 601 FKKRHRHYHHR 611
BLAST of Lcy09g003040 vs. NCBI nr
Match:
XP_008459413.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cucumis melo])
HSP 1 Score: 1013.1 bits (2618), Expect = 1.0e-291
Identity = 508/611 (83.14%), Postives = 540/611 (88.38%), Query Frame = 0
Query: 1 MRGLLGNPSPTLIFSNELNYQHDSYYPVSCVDKHFHKCINVNPGLKSCIRCTVTCGGNVV 60
MRG+LGN SPTLI NE NYQHDSYYP DKH +CINVNP LKSC+RCT+ GN V
Sbjct: 1 MRGVLGNSSPTLILLNEFNYQHDSYYPFRREDKHLRQCINVNPMLKSCMRCTIMYDGNAV 60
Query: 61 SMLSISIPRLNSVVQSTRAMKFRTGVGTLLNCEEDEPTELAID-EGVEESSEWKLPPWGD 120
SML +S PRLN VVQS R M+FRTGVGTLLNC EDE EL ID EGVE S EWKLPPWGD
Sbjct: 61 SMLPMSTPRLNLVVQSIRGMQFRTGVGTLLNCGEDEAIELVIDEEGVESSREWKLPPWGD 120
Query: 121 MAHQAEPSFQSEDVNQSKMLEVEALVNDSKVHFLEETDKVMLSKRILILSRKNKVRSALE 180
M HQ E +FQSEDVN K+LE EAL N+SKVHFLEETDKV+LSKRILILSRKNKVRSALE
Sbjct: 121 MTHQDEAAFQSEDVNLPKILEGEALENESKVHFLEETDKVLLSKRILILSRKNKVRSALE 180
Query: 181 LFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVAG 240
LFRSMQLAG+LP+LHALNSLLACLLRNGLF DGLRIFEFMK N+LSTGHTYSL+LKAVA
Sbjct: 181 LFRSMQLAGVLPNLHALNSLLACLLRNGLFADGLRIFEFMKLNELSTGHTYSLVLKAVAN 240
Query: 241 TRGFLSALEMFKAWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERTWRLMEASGCRATR 300
GFLSALEMFKAWEH+Y L QFDAIVYNTMIS+CGK+NNWVEAERTWRLME +GC AT
Sbjct: 241 AHGFLSALEMFKAWEHKYVLTQFDAIVYNTMISICGKDNNWVEAERTWRLMEKNGCTATH 300
Query: 301 ITYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMWDFALRVFQA 360
ITYSLL+STFVRCNQNELAID YVKMVQ+ FKPGND MQAIIGASSKEG WDFAL VFQ
Sbjct: 301 ITYSLLVSTFVRCNQNELAIDAYVKMVQSSFKPGNDTMQAIIGASSKEGKWDFALGVFQD 360
Query: 361 MLKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNALLGALYQANR 420
MLKCGLQPNSV+FNALI+ALGKAK+V LAFSIYNVMKSMGH DVYTWNALLGALY+ANR
Sbjct: 361 MLKCGLQPNSVSFNALINALGKAKEVTLAFSIYNVMKSMGHSPDVYTWNALLGALYKANR 420
Query: 421 YNDAIHLYEFVKR-EKTQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLLISASSYN 480
YNDAIHL+ FVKR EK QLNIHIYNTILM CSKLGLW+RALQILWEME SGLLIS +SYN
Sbjct: 421 YNDAIHLFGFVKREEKAQLNIHIYNTILMCCSKLGLWERALQILWEMEVSGLLISTTSYN 480
Query: 481 IVISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRSCIWGSLWDEVELLLNKSAPD 540
IV++ACE ARKPEIALQVYERM+HQKH PDTFTHLSLIR CIWGSLWDEVELLLNKS PD
Sbjct: 481 IVLTACETARKPEIALQVYERMVHQKHTPDTFTHLSLIRCCIWGSLWDEVELLLNKSGPD 540
Query: 541 VSVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNLPNDPARVKNRWVSR 600
VSVYN VIQGMCLRGKTDLAKKLYTKMRE+ IQ DGKTRALMLQNLP DPAR+KNRW S
Sbjct: 541 VSVYNVVIQGMCLRGKTDLAKKLYTKMRENSIQSDGKTRALMLQNLPKDPARLKNRWASG 600
Query: 601 FKKRHRHYHHR 610
FKKR R YHHR
Sbjct: 601 FKKRRRRYHHR 611
BLAST of Lcy09g003040 vs. NCBI nr
Match:
XP_022134520.1 (pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Momordica charantia] >XP_022134521.1 pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Momordica charantia] >XP_022134522.1 pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Momordica charantia])
HSP 1 Score: 1007.7 bits (2604), Expect = 4.3e-290
Identity = 499/609 (81.94%), Postives = 542/609 (89.00%), Query Frame = 0
Query: 1 MRGLLGNPSPTLIFSNELNYQHDSYYPVSCVDKHFHKCINVNPGLKSCIRCTVTCGGNVV 60
MRG+L NPSPTL+ SNELNYQ DSYYPV+ + H+C NVN LKS +RC++ GNV+
Sbjct: 1 MRGVLINPSPTLLLSNELNYQQDSYYPVTYAHRLLHQCRNVNSFLKSRMRCSIIYRGNVI 60
Query: 61 SMLSISIPRLNSVVQSTRAMKFRTGVGTLLNCEEDEPTELAIDEGVEESSEWKLPPWGDM 120
SMLS+S+PRLN V++STRAM+F TGVGTLLNCEEDE EL DE ES EWK PPWGD+
Sbjct: 61 SMLSMSVPRLNLVIRSTRAMEFSTGVGTLLNCEEDEAIELVTDEEGLESFEWKSPPWGDI 120
Query: 121 AHQAEPSFQSEDVNQSKMLEVEALVNDSKVHFLEETDKVMLSKRILILSRKNKVRSALEL 180
E SFQSED NQ +MLE EA +N SKVHFLEETD+VMLSKRILILSRKNKVRSA+EL
Sbjct: 121 VKHDESSFQSEDTNQPRMLEAEAFINGSKVHFLEETDEVMLSKRILILSRKNKVRSAMEL 180
Query: 181 FRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVAGT 240
FRSMQLAGLLPSLHALNSLLACLLRN LFDDGLRIF MK+NKLSTGHTYSLILKAVA
Sbjct: 181 FRSMQLAGLLPSLHALNSLLACLLRNELFDDGLRIFALMKTNKLSTGHTYSLILKAVADA 240
Query: 241 RGFLSALEMFKAWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERTWRLMEASGCRATRI 300
RGFLSALEMFKAWE EYD+K FD IVYNTMISVCGKENNWVEAERTWRLMEA+GC ATRI
Sbjct: 241 RGFLSALEMFKAWEQEYDVKHFDPIVYNTMISVCGKENNWVEAERTWRLMEANGCGATRI 300
Query: 301 TYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMWDFALRVFQAM 360
TY LL+STFVRC QNELAIDTYVKMVQN+FKPGND MQ IIGAS KEG WDFALRVF+ M
Sbjct: 301 TYCLLVSTFVRCKQNELAIDTYVKMVQNHFKPGNDTMQTIIGASLKEGKWDFALRVFEDM 360
Query: 361 LKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNALLGALYQANRY 420
LKCGLQPNSVAFNALIHALGKAKKV LAF++YN+MKSMGHP D YTWNALLG+LY+ANRY
Sbjct: 361 LKCGLQPNSVAFNALIHALGKAKKVTLAFNVYNMMKSMGHPPDAYTWNALLGSLYEANRY 420
Query: 421 NDAIHLYEFVKRE-KTQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLLISASSYNI 480
NDAI L+EFVKRE K QLNIH+YNTILMSCSKLGLWDR +QILWEMEASGLLIS +SYNI
Sbjct: 421 NDAIRLFEFVKREDKPQLNIHVYNTILMSCSKLGLWDRTIQILWEMEASGLLISTASYNI 480
Query: 481 VISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRSCIWGSLWDEVELLLNKSAPDV 540
VISACEMARKP+IALQVYERMIHQKH PDTFTHLSL+R CIWGSLWDEVE+LLNKSAP+V
Sbjct: 481 VISACEMARKPKIALQVYERMIHQKHTPDTFTHLSLVRCCIWGSLWDEVEVLLNKSAPNV 540
Query: 541 SVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNLPNDPARVKNRWVSRF 600
SVYNAVIQGMCLRGKTDLAK+LY+KMRE+GIQ DGKTRALMLQNLP DPAR NRW SRF
Sbjct: 541 SVYNAVIQGMCLRGKTDLAKRLYSKMRENGIQADGKTRALMLQNLPKDPARFNNRWASRF 600
Query: 601 KKRHRHYHH 609
+KR+RHYHH
Sbjct: 601 RKRNRHYHH 609
BLAST of Lcy09g003040 vs. NCBI nr
Match:
XP_022134523.1 (pentatricopeptide repeat-containing protein At3g29290 isoform X2 [Momordica charantia])
HSP 1 Score: 1007.7 bits (2604), Expect = 4.3e-290
Identity = 499/609 (81.94%), Postives = 542/609 (89.00%), Query Frame = 0
Query: 1 MRGLLGNPSPTLIFSNELNYQHDSYYPVSCVDKHFHKCINVNPGLKSCIRCTVTCGGNVV 60
MRG+L NPSPTL+ SNELNYQ DSYYPV+ + H+C NVN LKS +RC++ GNV+
Sbjct: 1 MRGVLINPSPTLLLSNELNYQQDSYYPVTYAHRLLHQCRNVNSFLKSRMRCSIIYRGNVI 60
Query: 61 SMLSISIPRLNSVVQSTRAMKFRTGVGTLLNCEEDEPTELAIDEGVEESSEWKLPPWGDM 120
SMLS+S+PRLN V++STRAM+F TGVGTLLNCEEDE EL DE ES EWK PPWGD+
Sbjct: 61 SMLSMSVPRLNLVIRSTRAMEFSTGVGTLLNCEEDEAIELVTDEEGLESFEWKSPPWGDI 120
Query: 121 AHQAEPSFQSEDVNQSKMLEVEALVNDSKVHFLEETDKVMLSKRILILSRKNKVRSALEL 180
E SFQSED NQ +MLE EA +N SKVHFLEETD+VMLSKRILILSRKNKVRSA+EL
Sbjct: 121 VKHDESSFQSEDTNQPRMLEAEAFINGSKVHFLEETDEVMLSKRILILSRKNKVRSAMEL 180
Query: 181 FRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVAGT 240
FRSMQLAGLLPSLHALNSLLACLLRN LFDDGLRIF MK+NKLSTGHTYSLILKAVA
Sbjct: 181 FRSMQLAGLLPSLHALNSLLACLLRNELFDDGLRIFALMKTNKLSTGHTYSLILKAVADA 240
Query: 241 RGFLSALEMFKAWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERTWRLMEASGCRATRI 300
RGFLSALEMFKAWE EYD+K FD IVYNTMISVCGKENNWVEAERTWRLMEA+GC ATRI
Sbjct: 241 RGFLSALEMFKAWEQEYDVKHFDPIVYNTMISVCGKENNWVEAERTWRLMEANGCGATRI 300
Query: 301 TYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMWDFALRVFQAM 360
TY LL+STFVRC QNELAIDTYVKMVQN+FKPGND MQ IIGAS KEG WDFALRVF+ M
Sbjct: 301 TYCLLVSTFVRCKQNELAIDTYVKMVQNHFKPGNDTMQTIIGASLKEGKWDFALRVFEDM 360
Query: 361 LKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNALLGALYQANRY 420
LKCGLQPNSVAFNALIHALGKAKKV LAF++YN+MKSMGHP D YTWNALLG+LY+ANRY
Sbjct: 361 LKCGLQPNSVAFNALIHALGKAKKVTLAFNVYNMMKSMGHPPDAYTWNALLGSLYEANRY 420
Query: 421 NDAIHLYEFVKRE-KTQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLLISASSYNI 480
NDAI L+EFVKRE K QLNIH+YNTILMSCSKLGLWDR +QILWEMEASGLLIS +SYNI
Sbjct: 421 NDAIRLFEFVKREDKPQLNIHVYNTILMSCSKLGLWDRTIQILWEMEASGLLISTASYNI 480
Query: 481 VISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRSCIWGSLWDEVELLLNKSAPDV 540
VISACEMARKP+IALQVYERMIHQKH PDTFTHLSL+R CIWGSLWDEVE+LLNKSAP+V
Sbjct: 481 VISACEMARKPKIALQVYERMIHQKHTPDTFTHLSLVRCCIWGSLWDEVEVLLNKSAPNV 540
Query: 541 SVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNLPNDPARVKNRWVSRF 600
SVYNAVIQGMCLRGKTDLAK+LY+KMRE+GIQ DGKTRALMLQNLP DPAR NRW SRF
Sbjct: 541 SVYNAVIQGMCLRGKTDLAKRLYSKMRENGIQADGKTRALMLQNLPKDPARFNNRWASRF 600
Query: 601 KKRHRHYHH 609
+KR+RHYHH
Sbjct: 601 RKRNRHYHH 609
BLAST of Lcy09g003040 vs. NCBI nr
Match:
XP_004141597.1 (pentatricopeptide repeat-containing protein At3g29290 [Cucumis sativus])
HSP 1 Score: 994.6 bits (2570), Expect = 3.8e-286
Identity = 501/610 (82.13%), Postives = 536/610 (87.87%), Query Frame = 0
Query: 1 MRGLLGNPSPTLIFSNELNYQHDSYYPVSCVDKHFHKCINVNPGLKSCIRCTVTCGGNVV 60
MRG+LGN SPTL+ NE NYQHDS+YP DK +CINVNP LKS +RCT+ GN V
Sbjct: 1 MRGVLGNSSPTLVLLNEFNYQHDSHYPFRREDKRLRQCINVNPMLKSWMRCTIMYDGNAV 60
Query: 61 SMLSISIPRLNSVVQSTRAMKFRTGVGTLLNCEEDEPTELAIDEGVEESS-EWKLPPWGD 120
S+L S PRLN VVQSTR +NC EDE EL IDEGVEESS EWKLPPWGD
Sbjct: 61 SVLPRSTPRLNLVVQSTRG----------VNCGEDEAIELVIDEGVEESSREWKLPPWGD 120
Query: 121 MAHQAEPSFQSEDVNQSKMLEVEALVNDSKVHFLEETDKVMLSKRILILSRKNKVRSALE 180
+AHQ E +FQSEDVNQ K+LE + L N+SK+HFLEETDKVMLSKRILILSRKNKVRSALE
Sbjct: 121 IAHQDEATFQSEDVNQPKILEGKVLENESKLHFLEETDKVMLSKRILILSRKNKVRSALE 180
Query: 181 LFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVAG 240
L RSMQLAGLLPSLHALNSLLACLLRN LF DGLRIFEFMK N+LSTGHTYSL+LKAVA
Sbjct: 181 LLRSMQLAGLLPSLHALNSLLACLLRNELFADGLRIFEFMKLNELSTGHTYSLVLKAVAN 240
Query: 241 TRGFLSALEMFKAWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERTWRLMEASGCRATR 300
GFLSALEMFKAWEH+ L QFDAIVYNTMIS+CGK+NNWVEAERTWRLME +GC ATR
Sbjct: 241 AHGFLSALEMFKAWEHQCVLAQFDAIVYNTMISICGKDNNWVEAERTWRLMEKNGCSATR 300
Query: 301 ITYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMWDFALRVFQA 360
ITYSLL+STFVRCNQNELAIDTYVKMVQN FKPGND MQAIIGASSKEG WDFALRVFQ
Sbjct: 301 ITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQAIIGASSKEGKWDFALRVFQD 360
Query: 361 MLKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNALLGALYQANR 420
MLKCGLQPNSV+FNALI+ALGKAK+V LAFS+YNVMKSMGH DVYTWNALLGALY+ANR
Sbjct: 361 MLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKSMGHSPDVYTWNALLGALYKANR 420
Query: 421 YNDAIHLYEFVKREKTQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLLISASSYNI 480
Y+DAIHL+EFVKREK QLNIHIYNTILMSCSKLGLW+RA+QILWEME SGL IS SSYNI
Sbjct: 421 YSDAIHLFEFVKREKVQLNIHIYNTILMSCSKLGLWERAVQILWEMEVSGLSISTSSYNI 480
Query: 481 VISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRSCIWGSLWDEVELLLNKSAPDV 540
V++ACEMARKPEIALQVYERM+HQKH PDTFTHLSLIR CIWGSLWDEVELLLNKSAPDV
Sbjct: 481 VMTACEMARKPEIALQVYERMVHQKHTPDTFTHLSLIRCCIWGSLWDEVELLLNKSAPDV 540
Query: 541 SVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNLPNDPARVKNRWVSRF 600
SVYN VIQGMCLRGK+DLAKKLYTKMRE+GIQPDGKTRALMLQNLP DPAR KNRW S F
Sbjct: 541 SVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTRALMLQNLPKDPARRKNRWASGF 600
Query: 601 KKRHRHYHHR 610
KKR RHYHHR
Sbjct: 601 KKRQRHYHHR 600
BLAST of Lcy09g003040 vs. TAIR 10
Match:
AT3G29290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 501.9 bits (1291), Expect = 7.2e-142
Identity = 255/467 (54.60%), Postives = 335/467 (71.73%), Query Frame = 0
Query: 120 MAHQAEPSFQSEDVNQSKMLEVEALVNDSKVHFLEETDKVMLSKRILILSRKNKVRSALE 179
++ + + SF E+V LE + + +++HFLEE ++ LSKR+ LSR +KVRSALE
Sbjct: 69 VSSELDSSFNGENVVCGLELEEKTAGDRNRIHFLEERNEETLSKRLRKLSRLDKVRSALE 128
Query: 180 LFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTGHTYSLILKAVAG 239
LF SM+ GL P+ HA NS L+CLLRNG +FEFM+ + TGHTYSL+LKAVA
Sbjct: 129 LFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSLMLKAVAE 188
Query: 240 TRGFLSALEMFKAWEHEYDLKQ-FDAIVYNTMISVCGKENNWVEAERTWRLMEASGCRAT 299
+G SAL MF+ E E + FD ++YNT IS+CG+ NN E ER WR+M+ G T
Sbjct: 189 VKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGT 248
Query: 300 RITYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMWDFALRVFQ 359
ITYSLL+S FVRC ++ELA+D Y +MV N D M A+I A +KE WD AL++FQ
Sbjct: 249 EITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQ 308
Query: 360 AMLKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNALLGALYQAN 419
+MLK G++PN VA N LI++LGKA KV L F +Y+V+KS+GH D YTWNALL ALY+AN
Sbjct: 309 SMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKAN 368
Query: 420 RYNDAIHLYEFVKREK-TQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGLLISASSY 479
RY D + L++ ++ E LN ++YNT ++SC KLG W++A+++L+EME SGL +S SSY
Sbjct: 369 RYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSY 428
Query: 480 NIVISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRSCIWGSLWDEVELLLNKSAP 539
N+VISACE +RK ++AL VYE M + P+TFT+LSL+RSCIWGSLWDEVE +L K P
Sbjct: 429 NLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEP 488
Query: 540 DVSVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNL 585
DVS+YNA I GMCLR + AK+LY KMRE G++PDGKTRA+MLQNL
Sbjct: 489 DVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNL 535
BLAST of Lcy09g003040 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 134.8 bits (338), Expect = 2.3e-31
Identity = 103/439 (23.46%), Postives = 211/439 (48.06%), Query Frame = 0
Query: 157 DKVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIF 216
D +++ I +L ++ +V SA +F +Q G +++ SL++ +G + + + +F
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 217 EFMKSNKLS-TGHTYSLILKAVAGTRG-----FLSALEMFKAWEHEYDLKQFDAIVYNTM 276
+ M+ + T TY++IL V G G S +E K+ D DA YNT+
Sbjct: 232 KKMEEDGCKPTLITYNVILN-VFGKMGTPWNKITSLVEKMKS-----DGIAPDAYTYNTL 291
Query: 277 ISVCGKENNWVEAERTWRLMEASGCRATRITYSLLISTFVRCNQNELAIDTYVKMVQNYF 336
I+ C + + EA + + M+A+G ++TY+ L+ + + ++ + A+ +MV N F
Sbjct: 292 ITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 351
Query: 337 KPGNDMMQAIIGASSKEGMWDFALRVFQAMLKCGLQPNSVAFNALIHALGKAKKVNLAFS 396
P ++I A +++GM D A+ + M + G +P+ + L+ +A KV A S
Sbjct: 352 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 411
Query: 397 IYNVMKSMGHPSDVYTWNALLGALYQANRYNDAIHLYEFVKREKTQLNIHIYNTILMSCS 456
I+ M++ G ++ T+NA + ++ + + +++ + +I +NT+L
Sbjct: 412 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 471
Query: 457 KLGLWDRALQILWEMEASGLLISASSYNIVISACEMARKPEIALQVYERMIHQKHAPDTF 516
+ G+ + EM+ +G + ++N +ISA E A+ VY RM+ PD
Sbjct: 472 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 531
Query: 517 THLSLIRSCIWGSLWDEVELLL-----NKSAPDVSVYNAVIQGMCLRGKTDLAKKLYTKM 576
T+ +++ + G +W++ E +L + P+ Y +++ + L L ++
Sbjct: 532 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 591
Query: 577 RESGIQPDGKTRALMLQNL 585
I+P RA++L+ L
Sbjct: 592 YSGVIEP----RAVLLKTL 600
BLAST of Lcy09g003040 vs. TAIR 10
Match:
AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 128.6 bits (322), Expect = 1.7e-29
Identity = 105/419 (25.06%), Postives = 196/419 (46.78%), Query Frame = 0
Query: 173 KVRSALELFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIFEFMKSNKLSTG-HTYS 232
K A++LFR M + LP++ N L + + + ++ L + + M+S ++ +T S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 233 LILKAVAGTRGFLSALE-MFKAWEHEYDLKQFDAIVYNTMISVCGKENNWVEAERTWRLM 292
+++ R A M K + Y+ D +++NT+++ E EA M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEP---DTVIFNTLLNGLCLECRVSEALELVDRM 187
Query: 293 EASGCRATRITYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGNDMMQAIIGASSKEGMW 352
G + T IT + L++ + A+ +MV+ F+P ++ K G
Sbjct: 188 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 247
Query: 353 DFALRVFQAMLKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNVMKSMGHPSDVYTWNAL 412
A+ + + M + ++ ++V ++ +I L K ++ AF+++N M+ G +D+ T+N L
Sbjct: 248 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 307
Query: 413 LGALYQANRYNDAIHLYEFVKREKTQLNIHIYNTILMSCSKLGLWDRALQILWEMEASGL 472
+G A R++D L + + K N+ ++ ++ S K G A Q+L EM G+
Sbjct: 308 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 367
Query: 473 LISASSYNIVISACEMARKPEIALQVYERMIHQKHAPDTFTHLSLIRS-CIWGSLWDEVE 532
+ +YN +I + E A+Q+ + MI + PD T LI C + D +E
Sbjct: 368 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 427
Query: 533 LLLNKSAPDV----SVYNAVIQGMCLRGKTDLAKKLYTKMRESGIQPDGKTRALMLQNL 585
L S V YN ++QG C GK ++AKKL+ +M ++PD + ++L L
Sbjct: 428 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
BLAST of Lcy09g003040 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 128.3 bits (321), Expect = 2.2e-29
Identity = 106/427 (24.82%), Postives = 186/427 (43.56%), Query Frame = 0
Query: 157 DKVMLSKRILILSRKNKVRSALELFRSMQLAGLLPSLHALNSLLACLLRNGLFDDGLRIF 216
+ V+ I LS+ N+V AL+L M L G +P N ++ L + ++ ++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 217 EFMKSNKLSTGH-TYSLILKAVAGTRGFLSALEMFKAWEHEYDLKQFDAIVYNTMISVCG 276
M + TY ++ + +A ++F Y + + + +++NT+I
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF------YRIPKPEIVIFNTLIHGFV 370
Query: 277 KENNWVEAERTWRLMEAS-GCRATRITYSLLISTFVRCNQNELAIDTYVKMVQNYFKPGN 336
+A+ M S G TY+ LI + + LA++ M KP
Sbjct: 371 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 430
Query: 337 DMMQAIIGASSKEGMWDFALRVFQAMLKCGLQPNSVAFNALIHALGKAKKVNLAFSIYNV 396
++ K G D A V M GL+PN+V FN LI A K ++ A I+
Sbjct: 431 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 490
Query: 397 MKSMGHPSDVYTWNALLGALYQANRYNDAIHLYEFVKREKTQLNIHIYNTILMSCSKLGL 456
M G DVYT+N+L+ L + + A+ L + E N YNT++ + + G
Sbjct: 491 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 550
Query: 457 WDRALQILWEMEASGLLISASSYNIVISACEMARKPEIALQVYERMIHQKHAPDTFTHLS 516
A +++ EM G + +YN +I A + + A ++E+M+ HAP +
Sbjct: 551 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 610
Query: 517 LIRSCIWGSLWDEV-----ELLLNKSAPDVSVYNAVIQGMCLRGKTDLAKKLYTKMRESG 576
LI + +E E++L S PD+ +N++I G+C G+ + ++ K++ G
Sbjct: 611 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 670
BLAST of Lcy09g003040 vs. TAIR 10
Match:
AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 124.4 bits (311), Expect = 3.1e-28
Identity = 78/315 (24.76%), Postives = 147/315 (46.67%), Query Frame = 0
Query: 270 MISVCGKENNWVEAERTWRLMEASGCRATRITYSLLISTFVRCNQNELAIDTYVKMVQNY 329
M+ C K N E ++M R Y+ LI F N +++ + + +M +
Sbjct: 139 MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198
Query: 330 FKPGNDMMQAIIGASSKEGMWDFALRVFQAMLKCGLQPNSVAFNALIHALGKAKKVNLAF 389
++P + +I +KEG D AL + M L + V +N I + GK KV++A+
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258
Query: 390 SIYNVMKSMGHPSDVYTWNALLGALYQANRYNDAIHLYEFVKREKTQLNIHIYNTILMSC 449
++ +++ G D T+ +++G L +ANR ++A+ ++E +++ + + YNT++M
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY 318
Query: 450 SKLGLWDRALQILWEMEASGLLISASSYNIVISACEMARKPEIALQVYERMIHQKHAPDT 509
G +D A +L A G + S +YN +++ K + AL+V+E M
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM--------- 378
Query: 510 FTHLSLIRSCIWGSLWDEVELLLNKSAPDVSVYNAVIQGMCLRGKTDLAKKLYTKMRESG 569
+AP++S YN +I +C GK D A +L M+++G
Sbjct: 379 ----------------------KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 422
Query: 570 IQPDGKTRALMLQNL 585
+ P+ +T +M+ L
Sbjct: 439 LFPNVRTVNIMVDRL 422
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q84J46 | 1.0e-140 | 54.60 | Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana OX... | [more] |
Q9LYZ9 | 3.3e-30 | 23.46 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
Q9LPX2 | 2.3e-28 | 25.06 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... | [more] |
Q9FMF6 | 3.1e-28 | 24.82 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q9M907 | 4.4e-27 | 24.76 | Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3C9M1 | 5.0e-292 | 83.14 | pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucumis melo... | [more] |
A0A6J1BY07 | 2.1e-290 | 81.94 | pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Momordica ch... | [more] |
A0A6J1C280 | 2.1e-290 | 81.94 | pentatricopeptide repeat-containing protein At3g29290 isoform X2 OS=Momordica ch... | [more] |
A0A0A0KVV0 | 1.8e-286 | 82.13 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G642190 PE=4 SV=1 | [more] |
A0A6J1JSM4 | 1.0e-273 | 80.88 | pentatricopeptide repeat-containing protein At3g29290 isoform X1 OS=Cucurbita ma... | [more] |
Match Name | E-value | Identity | Description | |
XP_038891011.1 | 2.9e-302 | 85.76 | pentatricopeptide repeat-containing protein At3g29290 [Benincasa hispida] >XP_03... | [more] |
XP_008459413.1 | 1.0e-291 | 83.14 | PREDICTED: pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Cuc... | [more] |
XP_022134520.1 | 4.3e-290 | 81.94 | pentatricopeptide repeat-containing protein At3g29290 isoform X1 [Momordica char... | [more] |
XP_022134523.1 | 4.3e-290 | 81.94 | pentatricopeptide repeat-containing protein At3g29290 isoform X2 [Momordica char... | [more] |
XP_004141597.1 | 3.8e-286 | 82.13 | pentatricopeptide repeat-containing protein At3g29290 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
AT3G29290.1 | 7.2e-142 | 54.60 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G02860.1 | 2.3e-31 | 23.46 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G12775.1 | 1.7e-29 | 25.06 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G64320.1 | 2.2e-29 | 24.82 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G06920.1 | 3.1e-28 | 24.76 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |