Lcy09g002990 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g002990
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	F-box protein
Location	Chr09: 2559212 .. 2561982 (-)
RNA-Seq Expression	Lcy09g002990
Synteny	Lcy09g002990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAAGGTTGGCGGCTGTGGTGCCGGTCTGGACTGGAGCAGTATATCTGCCATTGGTGGAGTAATTTTCTCGTTTTCTTGTTTCTTTGGCTATTGCGTACGGCCACTGGAGTCTATACTCCAATTCTTGCATCAACAATCATGTCTCAACTGCAAGAGGAGAAGTCTCTAATTAAACAACTTACAGAATTGAAAGTCACAGCAGAGGCAAAAGCATACATATTTAAACTAAAGGAGGAAGAATGTGTTATCAAAATCGTATGATACAAATCGAAACGGGAGGAAAACGATTCAGAACGTGATTTTGAATCGGAAATTTCATGTCTAGTACGATTCACAGAGCTTAATCAATAAACCTGAAAAAAAATTGCAACATACCTGCGATTTTGGGTTTAGGATTACTTGCCAGCACGCCCACGAAGGACTTCGCCAGCATGGAGCGGCGTAGAAAAAACCCTCGTGAAGAAGTTCGTAATACTCCAGAACTGGAAGAAGATGAAGAGCGAGAGAGCGAAAGGTTGTGGGCTGCTTTGGGTTTTGTTTGATTGAAGAAGATGAAGCAGAGGGAGAGTGAAAGGCTGGAGCTTGGAGGCGCGAGGCGTGAAGAAGACGAGAGAAATTAGGAAAAGCGTCAAACTTGAAACTTGAAAGGAAATTTGTTTTCTTTTTTTTTCAAATGGGTATTCTTGATTCTCCCTCCACAGCAGGGTAATTCCGAATTTTCTTCATTTTAGTTGCCAGTTGGGGTGCAGATAATTCTTTTTCTCCGATGAGAGGGTTTAGTTTTATCGGCCAATGTATTTTGAAAATACTTGATAGATTATATGAAACCAAATAGTAGTTTGTTGGCAAGAGCCTATTTATTAAGCCAACAAGTGGTCAACTGATATAAAGTCGTATGGATAACTACGAGATTTGTGATTCGAATCCTCCACTCCATATATGGTAAAAAAAAAAAAAAAAAAAAACTCTACTTATTAAAGGATGTTGATTTATTATCATCGTTCTCGGTTGCCTTCCTAGAAATTTTTATCCTTTAATCTTTCCATGGTTGATGAGGAAATAGAGGGGTTAGGTCGAGAGACATTCTTGTGAGGTTTGAGCTAATACTAGATTGTAGGGGTGAGCAAAAATTTCCGAAAAACCGATCCGACCGACCGAAACCGGCCGAACCGACGTCGGTCGGTCGGTTTCACTCCATGGTCGGTCGGTTTCGGTTTGGCATGGTTCGACGTCGGTCGGTCGGTTTCACTCCATGGTCGGTCGGTTTCGGTTTGGCATAATGCCAAACCGAAAAAGTCGGTCGGTCGGTCCAATATGGAGGTCGAGAACCGACCGGACCGACCGACATATATATAAAAAAAAAATCCCTCTGATTTCTTCTATTAAGCCCACTCACTCCCAGCCCACCCCACGCCCTGGCCCAACCCACCACCCTCTCATCTCAGACAAACCAGAAACCGAAGCCCACTGCCCACATTTATTATTACTTTAAAAAAAAATAATAAATTCCATTTACTCAAATTCCCATTTTCATCTTCTTCGATAAACCTACCCCCCTCCCCTCACGCACGCCTCTCACTCTCTCAGATCAACAAACCCTTGTCGTTGCAACTCGTCGTCCCTCGCCCGTCGTTTTCTTTTTCTTCTTCTTCGTCTGCAGCTCACCGTGACCCTCGTCGTCGCCGTCGCCGCCCCTCCGCCAGTCCTTTTCTTTTTCTTCTTCTTCTTCGTCTGCAGCTCACCGTGACCGCGCAACCGCCGTTTTCTTTTTCTTCTTCTTCATCTGCAGCTCACCGTGACCCTCACCGTCGTCGTCGGTTAAACCGACCAAACCGACCGACCGACCAGTCGGTCGATCGGTCGGTGAAAATACCAATTTTAAAATAATCGGTTTCCAGTTTTGGAAACCGATTACGGTCGGTTCAGCGTCAGTTTGGGGCCAAAACCGACCCCGACCGACCGATGCTCAGGCCTACTAGATTGTCAGTTTCTTTATGGGCCTCAGTTTCCAAGGCTTTCTGTAATTACCCATAAAATAATTTTTTTAATACAAAAATTTTGTCACGTCAGCAACCCATTAAGTATTAACTGAAAATTGGATGGATGGACCAAAATGAAATTAAAACCAAACATCAAGAGCTATATTGTTGAGTTTGAAAACTCATGGACTAAAATGAAACCTAACCCAGACCTTAAAGACTAAAAGTGTATTTTTCTTCTTTTTTTTCTTGTCAAATTTTCACATGGGCCGGTTGCAAGGATGACAAACTGGGCCAAACTAATTACAAATATAGCAGCCCACAAAAAAAATTGCAAAAATAGCAAAAATTGAAGGTATGAAACACGCATTTACTAAAATACTCATCCTCCTAAACCCTGAACCCTATCTTCCATTTTCTATCATCTCCATTTCAAATTTGCTTGATTTCTATCAGTCTACATCTCCATTTCAATCCTTCCTCTTCGGCTTCATCAAATCCATCATCAAGTCGTTCTTCGATTTGATTTCCTTTATTCTCGTACAATCCGAGTCGCAGAACTCTCCGACGCAAATCCTCCGCCAGTTTGCTCGGATCCACCGCCTCGAGATCGAGTTTCCGACAGGCGATCCCAAGGTCGACAGAGTCGGGGGCGTTAAATGGAAAGCGGAGTTTGGGATTACGATGAGAAGCTGCGTGATTTTGATTTTTCGAGGGATTAGGGATTTGGATGATCGGGCGGCAATGGCGGAGGATTTCGATTTCATTGGAGGGCTGAAATTTTGA

mRNA sequence

ATGGCAGAAGGTTGGCGGCTGTGGTGCCGGTCTGGACTGGAGCAGTATATCTGCCATTGGTGGAGTAATTTTCTCGTTTTCTTGTTTCTTTGGCTATTGCGTACGGCCACTGGAGTCTATACTCCAATTCTTGCATCAACAATCATGTCTCAACTGCAAGAGGAGAAGTCTCTAATTAAACAACTTACAGAATTGAAAGTCACAGCAGAGGCAAAAGCATACATATTTAAACTAAAGGAGGAAGAATGTGTTATCAAAATCTCTACATCTCCATTTCAATCCTTCCTCTTCGGCTTCATCAAATCCATCATCAAGTCGTTCTTCGATTTGATTTCCTTTATTCTCGTACAATCCGAGTCGCAGAACTCTCCGACGCAAATCCTCCGCCAGTTTGCTCGGATCCACCGCCTCGAGATCGAGTTTCCGACAGGCGATCCCAAGGTCGACAGAGTCGGGGGCGTTAAATGGAAAGCGGAGTTTGGGATTACGATGAGAAGCTGCGTGATTTTGATTTTTCGAGGGATTAGGGATTTGGATGATCGGGCGGCAATGGCGGAGGATTTCGATTTCATTGGAGGGCTGAAATTTTGA

Coding sequence (CDS)

ATGGCAGAAGGTTGGCGGCTGTGGTGCCGGTCTGGACTGGAGCAGTATATCTGCCATTGGTGGAGTAATTTTCTCGTTTTCTTGTTTCTTTGGCTATTGCGTACGGCCACTGGAGTCTATACTCCAATTCTTGCATCAACAATCATGTCTCAACTGCAAGAGGAGAAGTCTCTAATTAAACAACTTACAGAATTGAAAGTCACAGCAGAGGCAAAAGCATACATATTTAAACTAAAGGAGGAAGAATGTGTTATCAAAATCTCTACATCTCCATTTCAATCCTTCCTCTTCGGCTTCATCAAATCCATCATCAAGTCGTTCTTCGATTTGATTTCCTTTATTCTCGTACAATCCGAGTCGCAGAACTCTCCGACGCAAATCCTCCGCCAGTTTGCTCGGATCCACCGCCTCGAGATCGAGTTTCCGACAGGCGATCCCAAGGTCGACAGAGTCGGGGGCGTTAAATGGAAAGCGGAGTTTGGGATTACGATGAGAAGCTGCGTGATTTTGATTTTTCGAGGGATTAGGGATTTGGATGATCGGGCGGCAATGGCGGAGGATTTCGATTTCATTGGAGGGCTGAAATTTTGA

Protein sequence

MAEGWRLWCRSGLEQYICHWWSNFLVFLFLWLLRTATGVYTPILASTIMSQLQEEKSLIKQLTELKVTAEAKAYIFKLKEEECVIKISTSPFQSFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHRLEIEFPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIRDLDDRAAMAEDFDFIGGLKF

Homology

[Close]

BLAST of Lcy09g002990 vs. ExPASy Swiss-Prot
Match: Q9LM18 (F-box protein AUF2 OS=Arabidopsis thaliana OX=3702 GN=AUF2 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11
Identity = 49/164 (29.88%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 38  GVYTPILASTIMSQLQEEKSLIKQLTELK----VTAEAKAYIFKLKEEECVIKISTSPFQ 97
           G+  PI+   I++++ + K+L++  +  K    +  ++++   +L        + TS F+
Sbjct: 6   GLPDPIIVD-ILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVSDSPVVTSIFR 65

Query: 98  SFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHRLEIEFPTGDPKVDRVGG 157
           S   G +  + K        I + + S + P +IL +F RI  L++E P GD K+++   
Sbjct: 66  SLFNGLVSLLSKP----AKPITITTLSPSLPFKILSRFDRIRNLDVELPGGDVKLEKGAA 125

Query: 158 VKWKAEFGITMRSCVILIFRGIRDLDDRAAM--AEDFDFIGGLK 196
           VKWKAEFG T++SCVI+ FR    +    A+    D +F+ GLK
Sbjct: 126 VKWKAEFGKTLKSCVIVAFRSAGTVSSPVAVEGESDAEFVTGLK 164

[Close]

BLAST of Lcy09g002990 vs. ExPASy Swiss-Prot
Match: Q9C9S2 (F-box protein AUF1 OS=Arabidopsis thaliana OX=3702 GN=AUF1 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.1e-11
Identity = 45/125 (36.00%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 88  STSPFQSFLFGFIKSIIKSFFDLISFIL--------VQSESQNSPTQILRQFARIHRLEI 147
           S S   S +  F +S+ KS   L+  I         + + S  +P QIL  F RI  LE+
Sbjct: 58  SDSEIDSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNLEV 117

Query: 148 EFPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIRDLDDRAAMA---------EDFDF 196
           E   GD K+++   VKWKAEFG T++SCVI+ FR        A  A          D +F
Sbjct: 118 ELYGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVESDSEF 177

[Close]

BLAST of Lcy09g002990 vs. ExPASy Swiss-Prot
Match: O49508 (F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.2e-07
Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 120 SQNSPTQILRQFARIHRLEIEFPTGDPKVDRVGGVKWKAEFGITMRSCVIL 171
           + +SPTQ+L+ F  I  L+IE P+G+  +D    +KW+AEFG T+ +CVIL
Sbjct: 147 THHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVIL 197

[Close]

BLAST of Lcy09g002990 vs. ExPASy Swiss-Prot
Match: Q9FNK5 (F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 8.1e-07
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 120 SQNSPTQILRQFARIHRLEIEFPTGDPKVDRVGGVKWKAEFGITMRSCVIL 171
           + +SPTQ+L+ F  I  L IE P+G+  +D    +KW+AEFG T+ +CVIL
Sbjct: 156 THHSPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDNCVIL 206

[Close]

BLAST of Lcy09g002990 vs. ExPASy Swiss-Prot
Match: Q9C534 (F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.2e-06
Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 106 SFFDLISFILVQSE---SQNSPTQILRQFARIHRLEIEFPTGDPKVDRVGGVKWKAEFGI 165
           S FD  SF  +  E   + +SPTQ+L+ F  I  L+IE PTG+  ++    +KW+A+FG 
Sbjct: 135 SSFD-ASFSAINDEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGS 194

Query: 166 TMRSCVIL 171
           T+ +C+IL
Sbjct: 195 TLDNCMIL 201

[Close]

BLAST of Lcy09g002990 vs. ExPASy TrEMBL
Match: A0A6J1KRK0 (F-box protein At1g78100-like OS=Cucurbita maxima OX=3661 GN=LOC111496576 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.3e-35
Identity = 83/116 (71.55%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 82  ECVIKI-STSPFQSFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHRLEIE 141
           +CVI   S S   SFL+GF KS++KSFFDLIS ILVQSESQNSP QILRQF RI RLEIE
Sbjct: 62  DCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEIE 121

Query: 142 FPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIR-DLDDRAAMAEDFDFIGGLK 196
           FPTGD KV+R+GGVKW+AEFGIT+RSCVIL+FRGIR +  D  A+A+ FDFI  LK
Sbjct: 122 FPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELK 177

[Close]

BLAST of Lcy09g002990 vs. ExPASy TrEMBL
Match: A0A6J1GI01 (F-box protein At1g22220-like OS=Cucurbita moschata OX=3662 GN=LOC111454360 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.3e-35
Identity = 83/116 (71.55%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 82  ECVIKI-STSPFQSFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHRLEIE 141
           +CVI   S S   SFL+GF KS++KSFFDLIS ILVQSESQNSP QILRQF RI RLEIE
Sbjct: 62  DCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEIE 121

Query: 142 FPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIR-DLDDRAAMAEDFDFIGGLK 196
           FPTGD KV+R+GGVKW+AEFGIT+RSCVIL+FRGIR +  D  A+A+ FDFI  LK
Sbjct: 122 FPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELK 177

[Close]

BLAST of Lcy09g002990 vs. ExPASy TrEMBL
Match: A0A0A0LN04 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G307320 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-24
Identity = 73/121 (60.33%), Postives = 85/121 (70.25%), Query Frame = 0


Query: 82  ECVIKI---STSPFQSFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHRLE 141
           +CVI     S S   SFL  F KS++KSF DL+S IL+QSESQNSP QILRQF RI  L+
Sbjct: 78  DCVISSDSDSDSHQNSFLLSFFKSVLKSFLDLLSPILLQSESQNSPAQILRQFRRIQHLQ 137

Query: 142 IEFPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIR----DLDDRAAMAEDFDFIGGL 196
           IEFPT D KV+RV  VKW+AEFG  ++SCVILIFR IR    + DD   +  D DFIGGL
Sbjct: 138 IEFPTTDLKVERV--VKWRAEFGDALKSCVILIFREIRKGAIEEDD---VDSDLDFIGGL 193

[Close]

BLAST of Lcy09g002990 vs. ExPASy TrEMBL
Match: A0A5A7VGI7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001430 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.4e-24
Identity = 72/124 (58.06%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 82  ECVIKI-----STSPFQSFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHR 141
           +CVI       S S   SFL  F KS++KSF DL+S ILVQSE+QNSP QILRQF +I  
Sbjct: 56  DCVISSDSDSDSDSDQNSFLLSFFKSVVKSFLDLLSPILVQSETQNSPAQILRQFLQIQH 115

Query: 142 LEIEFPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIRDLDDRAAMAED-----FDFI 196
           L+IEFPT D KV+RV  VKW+AEFG  ++SCVILIFR IR    + A+ ED      DFI
Sbjct: 116 LQIEFPTTDLKVERV--VKWRAEFGDALKSCVILIFREIR----KGAIEEDDVDYNLDFI 173

[Close]

BLAST of Lcy09g002990 vs. ExPASy TrEMBL
Match: A0A1S3BC00 (F-box protein At1g22220 OS=Cucumis melo OX=3656 GN=LOC103488404 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.4e-24
Identity = 72/124 (58.06%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 82  ECVIKI-----STSPFQSFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHR 141
           +CVI       S S   SFL  F KS++KSF DL+S ILVQSE+QNSP QILRQF +I  
Sbjct: 74  DCVISSDSDSDSDSDQNSFLLSFFKSVVKSFLDLLSPILVQSETQNSPAQILRQFLQIQH 133

Query: 142 LEIEFPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIRDLDDRAAMAED-----FDFI 196
           L+IEFPT D KV+RV  VKW+AEFG  ++SCVILIFR IR    + A+ ED      DFI
Sbjct: 134 LQIEFPTTDLKVERV--VKWRAEFGDALKSCVILIFREIR----KGAIEEDDVDYNLDFI 191

[Close]

BLAST of Lcy09g002990 vs. NCBI nr
Match: XP_023002829.1 (F-box protein At1g78100-like [Cucurbita maxima])

HSP 1 Score: 157.9 bits (398), Expect = 8.8e-35
Identity = 83/116 (71.55%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 82  ECVIKI-STSPFQSFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHRLEIE 141
           +CVI   S S   SFL+GF KS++KSFFDLIS ILVQSESQNSP QILRQF RI RLEIE
Sbjct: 62  DCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEIE 121

Query: 142 FPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIR-DLDDRAAMAEDFDFIGGLK 196
           FPTGD KV+R+GGVKW+AEFGIT+RSCVIL+FRGIR +  D  A+A+ FDFI  LK
Sbjct: 122 FPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELK 177

[Close]

BLAST of Lcy09g002990 vs. NCBI nr
Match: XP_022951596.1 (F-box protein At1g22220-like [Cucurbita moschata])

HSP 1 Score: 157.9 bits (398), Expect = 8.8e-35
Identity = 83/116 (71.55%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 82  ECVIKI-STSPFQSFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHRLEIE 141
           +CVI   S S   SFL+GF KS++KSFFDLIS ILVQSESQNSP QILRQF RI RLEIE
Sbjct: 62  DCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEIE 121

Query: 142 FPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIR-DLDDRAAMAEDFDFIGGLK 196
           FPTGD KV+R+GGVKW+AEFGIT+RSCVIL+FRGIR +  D  A+A+ FDFI  LK
Sbjct: 122 FPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELK 177

[Close]

BLAST of Lcy09g002990 vs. NCBI nr
Match: XP_023537288.1 (F-box protein At1g22220-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 157.9 bits (398), Expect = 8.8e-35
Identity = 83/116 (71.55%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 82  ECVIKI-STSPFQSFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHRLEIE 141
           +CVI   S S   SFL+GF KS++KSFFDLIS ILVQSESQNSP QILRQF RI RLEIE
Sbjct: 62  DCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEIE 121

Query: 142 FPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIR-DLDDRAAMAEDFDFIGGLK 196
           FPTGD KV+R+GGVKW+AEFGIT+RSCVIL+FRGIR +  D  A+A+ FDFI  LK
Sbjct: 122 FPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELK 177

[Close]

BLAST of Lcy09g002990 vs. NCBI nr
Match: KAG6585288.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020208.1 F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157.9 bits (398), Expect = 8.8e-35
Identity = 83/116 (71.55%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 82  ECVIKI-STSPFQSFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHRLEIE 141
           +CVI   S S   SFL+GF KS++KSFFDLIS ILVQSESQNSP QILRQF RI RLEIE
Sbjct: 62  DCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEIE 121

Query: 142 FPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIR-DLDDRAAMAEDFDFIGGLK 196
           FPTGD KV+R+GGVKW+AEFGIT+RSCVIL+FRGIR +  D  A+A+ FDFI  LK
Sbjct: 122 FPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELK 177

[Close]

BLAST of Lcy09g002990 vs. NCBI nr
Match: XP_038886087.1 (F-box protein At1g22220 [Benincasa hispida])

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-29
Identity = 77/115 (66.96%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 82  ECVIKI-STSPFQSFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHRLEIE 141
           +CVI   S S   SFL  F KS++KSFF LIS +LVQSESQNSP QILRQF +I RL+IE
Sbjct: 65  DCVISSDSDSDQDSFLLTFFKSVVKSFFHLISTVLVQSESQNSPAQILRQFRQIQRLQIE 124

Query: 142 FPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIRDLDDRAAMAEDFDFIGGLK 196
           FPTGD KV+RV  VKWKAEFG  ++SCVILIFRGIR  +  A    DFDFIGGLK
Sbjct: 125 FPTGDLKVERV--VKWKAEFGDALKSCVILIFRGIRSGEIVADEDVDFDFIGGLK 177

[Close]

BLAST of Lcy09g002990 vs. TAIR 10
Match: AT1G22220.1 (F-box family protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-12
Identity = 49/164 (29.88%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 38  GVYTPILASTIMSQLQEEKSLIKQLTELK----VTAEAKAYIFKLKEEECVIKISTSPFQ 97
           G+  PI+   I++++ + K+L++  +  K    +  ++++   +L        + TS F+
Sbjct: 6   GLPDPIIVD-ILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVSDSPVVTSIFR 65

Query: 98  SFLFGFIKSIIKSFFDLISFILVQSESQNSPTQILRQFARIHRLEIEFPTGDPKVDRVGG 157
           S   G +  + K        I + + S + P +IL +F RI  L++E P GD K+++   
Sbjct: 66  SLFNGLVSLLSKP----AKPITITTLSPSLPFKILSRFDRIRNLDVELPGGDVKLEKGAA 125

Query: 158 VKWKAEFGITMRSCVILIFRGIRDLDDRAAM--AEDFDFIGGLK 196
           VKWKAEFG T++SCVI+ FR    +    A+    D +F+ GLK
Sbjct: 126 VKWKAEFGKTLKSCVIVAFRSAGTVSSPVAVEGESDAEFVTGLK 164

[Close]

BLAST of Lcy09g002990 vs. TAIR 10
Match: AT1G78100.1 (F-box family protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.9e-12
Identity = 45/125 (36.00%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 88  STSPFQSFLFGFIKSIIKSFFDLISFIL--------VQSESQNSPTQILRQFARIHRLEI 147
           S S   S +  F +S+ KS   L+  I         + + S  +P QIL  F RI  LE+
Sbjct: 58  SDSEIDSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNLEV 117

Query: 148 EFPTGDPKVDRVGGVKWKAEFGITMRSCVILIFRGIRDLDDRAAMA---------EDFDF 196
           E   GD K+++   VKWKAEFG T++SCVI+ FR        A  A          D +F
Sbjct: 118 ELYGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVESDSEF 177

[Close]

BLAST of Lcy09g002990 vs. TAIR 10
Match: AT4G18380.1 (F-box family protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.4e-08
Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 120 SQNSPTQILRQFARIHRLEIEFPTGDPKVDRVGGVKWKAEFGITMRSCVIL 171
           + +SPTQ+L+ F  I  L+IE P+G+  +D    +KW+AEFG T+ +CVIL
Sbjct: 147 THHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVIL 197

[Close]

BLAST of Lcy09g002990 vs. TAIR 10
Match: AT4G18380.2 (F-box family protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.4e-08
Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 120 SQNSPTQILRQFARIHRLEIEFPTGDPKVDRVGGVKWKAEFGITMRSCVIL 171
           + +SPTQ+L+ F  I  L+IE P+G+  +D    +KW+AEFG T+ +CVIL
Sbjct: 147 THHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVIL 197

[Close]

BLAST of Lcy09g002990 vs. TAIR 10
Match: AT5G46170.1 (F-box family protein )

HSP 1 Score: 55.5 bits (132), Expect = 5.7e-08
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 120 SQNSPTQILRQFARIHRLEIEFPTGDPKVDRVGGVKWKAEFGITMRSCVIL 171
           + +SPTQ+L+ F  I  L IE P+G+  +D    +KW+AEFG T+ +CVIL
Sbjct: 156 THHSPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDNCVIL 206

The following BLAST results are available for this feature:

BLAST of Lcy09g002990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LM18	1.4e-11	29.88	F-box protein AUF2 OS=Arabidopsis thaliana OX=3702 GN=AUF2 PE=2 SV=1	[more]
Q9C9S2	4.1e-11	36.00	F-box protein AUF1 OS=Arabidopsis thaliana OX=3702 GN=AUF1 PE=1 SV=1	[more]
O49508	6.2e-07	47.06	F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1	[more]
Q9FNK5	8.1e-07	47.06	F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1	[more]
Q9C534	5.2e-06	41.18	F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1	[more]

BLAST of Lcy09g002990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KRK0	4.3e-35	71.55	F-box protein At1g78100-like OS=Cucurbita maxima OX=3661 GN=LOC111496576 PE=4 SV...	[more]
A0A6J1GI01	4.3e-35	71.55	F-box protein At1g22220-like OS=Cucurbita moschata OX=3662 GN=LOC111454360 PE=4 ...	[more]
A0A0A0LN04	1.2e-24	60.33	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G307320 PE=4 ...	[more]
A0A5A7VGI7	3.4e-24	58.06	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001430 ...	[more]
A0A1S3BC00	3.4e-24	58.06	F-box protein At1g22220 OS=Cucumis melo OX=3656 GN=LOC103488404 PE=4 SV=1	[more]

BLAST of Lcy09g002990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002829.1	8.8e-35	71.55	F-box protein At1g78100-like [Cucurbita maxima]	[more]
XP_022951596.1	8.8e-35	71.55	F-box protein At1g22220-like [Cucurbita moschata]	[more]
XP_023537288.1	8.8e-35	71.55	F-box protein At1g22220-like [Cucurbita pepo subsp. pepo]	[more]
KAG6585288.1	8.8e-35	71.55	F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020208.1 F-b...	[more]
XP_038886087.1	4.2e-29	66.96	F-box protein At1g22220 [Benincasa hispida]	[more]

BLAST of Lcy09g002990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22220.1	1.0e-12	29.88	F-box family protein	[more]
AT1G78100.1	2.9e-12	36.00	F-box family protein	[more]
AT4G18380.1	4.4e-08	47.06	F-box family protein	[more]
AT4G18380.2	4.4e-08	47.06	F-box family protein	[more]
AT5G46170.1	5.7e-08	47.06	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 52..72
None	No IPR available	PANTHER	PTHR31215:SF32	BNAA07G10620D PROTEIN	coord: 83..195
IPR044809	F-box protein AUF1-like	PANTHER	PTHR31215	OS05G0510400 PROTEIN-RELATED	coord: 83..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g002990.1	Lcy09g002990.1	mRNA