Lcy09g002790 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g002790
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	cyclin-B1-2-like
Location	Chr09: 2365253 .. 2371477 (+)
RNA-Seq Expression	Lcy09g002790
Synteny	Lcy09g002790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTGTGAGTTCATGGTTACTTCTGGAAGTACTAAATATTAATTAAATATTTTAAAGGTATACTCATTATTCCTCACCATTTATAGACGTTTTTTAAAATATGTTAAAAAAGACTTTTGGTCCCTGAACTTTCATCAAAGTTAGTTTAGTCTTTAAACTTTAAATTGTAACCATTTAGACAATTTAGTCTCTAAACTTACAGTTTAGTCCAATTGATCATACTGTGAGAGAGAAGATTAACGACCAGGAGGTGAGATCTTCTTAAGATTCCATTCTTTTATCTTCGTTCTTGAGTTCAAGATTGTTTCGGTGTTTCTTTAGATATTTCTTGACGAGAACTGTAGGTCGGAAGGAGGGTAAAATTGGAATTGAAAACATAATCGTTTGTGACGTGGACGGAACCGCTTTCTTGAAAGCAAAACTCGACATGACCTCGGTGCTAAATTGTTTTACTACCGGTATGCTCCCCAAGGTTAACACAACCTCTGAATCAGACAAACACTCTTCGAGACATAATGAAATCATTTTCGTGCTTAGGAAAGGAAAATGGAAAACTGAGAGGAGAAGTGGAAAGTTGAGAGGAGGAGAAGAGAGAATGAGGTGGGATGATGAAGAATGCAGGAGAATGACTGTATTTATACTGCAGAAGTGACCCAAAATATAAGTGAATTTTTAAAATAAAAAAAAAACTCCAAAAATTTGTGGTCAACCACATGTCGTTGACCAACCTTTCCTTCCTCAAACCAACGTCTCCATCCTCCACTTCCTCTAAAACCACCACGTGGATTTGACTAAGCAGAATACTATTGAAACAAATTTGAAGAAGAAAAATGTCCCAAAAAGATAAGTCAGACATGGCTTGCGCCCAAGCCGGTCGAACGTAAATTCCTCTTGTTTACTATTACCACTGTTTTTTTTTTCCTTTATTACAACATGAAGATGGCGTTCAAAAGGATCCATAATTACAACATGTAGATGGTGTTCCACAGGATCCTGAGGAACAAGTGTTCATATTTTGTAATTTCAAAACAGGATGCAAGGTTCCATGCTGTAATTTAGGATCCTGTGGTGAGACGATTAACGACTCGAAGGTGAGAGAGACGATCAACGACTCGGAGGTGAGACCTTCTCAAGATTCCATTCTTTTTCTCTGTTTTTGAGTTTAAGATTGTTTCAGTGTTTCTTTAGGTATTTCTTGACAAAAACTGTAGGTCGGAAGGAAGGTAAAATTGGAATTGAAAACATAATTGTTGTGACGTGGACGAAACCACTACCTTGAAAGCAAAACTCGGCACGACCTCGGTGCTAAATCGTTTGACTATCGGTATGCTCTCCAAGGTTAACACAAACCTCCGAATCAGATGTACACTCGTTGGGACAGAGTGGAATCAATTTCGTGCTCAAGAGAGAAAAATGGAAAGTTGAGAGGAGAAGTGGAAAGCTGAGTAGGATAAAAGAGAATGAGATGGGATGATGAAAAAGGCAGGGAAATGGTTGTATTTATACGACAGGAGTGGCTCAAAATAGAAGTGGATTTTTAAAATAAAAAGCTCCAAAAATTTGTGGCCACCCACGTGTCCTTGACCAACCTTCCCTTACTCAGACCAACGTCTCCATCCTCCACTTCCTCTGAGACCGCCACATGGGCTTGACTAAGCAGAATACTATTGAAAGAAATTTGAAGAAGAAAAATGTTCCAAAAAGATAAGCCAAGCTCGACCCGTGCTTACTATTATCTTTTTTTTTTTCCTTTATTACAGCATTGAAGACGGCGTTCCACAGGATCCTCAATTACAACATAAAAATGGCGACTGATGTTTTGCCTTTCTCTCACGTTGAAGCATGGCTCTTGCCTTCTAAACTTCACCTCTCTCCAACATTGAAGTGGGAGTGTCGGGAAGAAACGTGGCTGAGATTGTAATGAACAGTGTTGGCACTACAGCACTGCTCAAACTTACTCGCCACCCCCATCCACCATGAATATTGGCAGTATCATAATTGACAAAATTAGCAACTAGAATACCTATTGTAATGAAAAGTTGAAAAACAACATTGAGAGAGCCTTTTATACTTAGATGGAGCCATCTTCGGAACATAAAGCGGAATAGATTGAAGTGAAAATCCAACGTCAATGCCCAAACAAATACGACCAATGATTAACATGGCGATGTTTTGAGCTGCAATATTAACGACAACACCAACCAAGAACACAAAACCACCAAGAAGCATAGACTTTACCAAAGGTTTTGGTGACCCAAGATACTACAAAAGAGGCCAAAAGTACAACTAGATAAAGAGAAGAAGTGAACATAGTAAGAGTAAGACTGTCAAACTTGTAGTAGCTTCATTCTGATAAACCGATGGAAAAAGTTTCTGCAAAAAAGGAGCCATGGAGGTGACACCACCTATGAACAAAAACAAAATAAAAATGGGAGTGAGTGAAAACTGTAGAGGGAAAAAGAAAAGAAAAGAAAAAGATGTGAGACCAAATAATTACTTAAGATACCGATGTCGTAACCGAAGATGAGTCCACCCATGATAGCAACAATGCAAGTAATCAAGACATAAAAAGTGAGCTCTCCGGGATAGTTGTTTATCCCACCGCCATCATTACAGTCGAGCTCGAAACCACCGTCGGCCATGTTGGTTGCTGAGAGAATTGGAAAAATAGAAGTAGATATGATTATTGATTGGAGACGAGAGATTGCAGAATGTGAAAAAACAAGTGTTCAATGGGACAATTTATAATATCACCAAATATTTCCCTACGTTATTAGGAATCTCTTTCCTACTCCTAAAACAAAATCCATGTATTATTAGGAGACTATATTGTGGATAATGACGTAATTAACTTCATAATTCAAAATTTTCAACAATATTAATGTAATATAATTTTTTTTAGGAAAATATTAATGTAATATTTACTCAATGAGATAATTGTAAGTATATGGACTAAATTGTTACCTATTAAAGTTTAGAGACTAGAGTGTTATAAAATTGGATGTATAGAAGTTAAATCGGTTAAATGATCAAAAATACCCTTGAACTATGGGTTAGTTTCAATTATATTCATAAACTTTCAAAAATTTCATTTTAGCTCTCGAAGTTTGAAGTTTGTTTAAAAAAAATCATTGAAGACATTTTTCGTTAAATTTATGGACAGAAGATGACGAGTTTGCATATATTATTGTTGTTTATGTGAATGTATTTGAACATATACATGGAAAAGCAATAAAAACACGTGCAAATACATGATTTTTTGTCCATAAATTTAACAAAAAATGTCTATATGGATTGAAAAACAGGATAAAATAGAACTTTTTAAACCTTTAGGAATATAATTGAACCTAATTTCGTAGTTGAAGATATTATGTTTTTTTTTTTGATAACGTAGTTGAAGATATTATTGATAATTTAACTAAATTAAATTTTTACAAATTAAAGTTTTGAAATTAATTGTTACCCCATAAAAGTTTAGGGATGAAAAATATTTTATAACCAGTTATTTAAATAGTCGTGGGATTATTTTGGGCAAAAATGAAAACTTTTCTTCGAAGTCACTGAGTTTTATATAAATAGCAAAACGATACCAATTCGCAGTTCGCAAAGGCTCAGCTTTCTGCTCTCGACTTGCAGAAGAAGTTTTCTGGAGCTTGTTCCTTGAAGAAGAAAAATGGAGTCTTCGAAGACCATACCCCATGAAATCGGTGGGATCCAAAACGATGCCCTTCGATTTGGCCTCCAAGGCGTTAGGAGCGACCTCGTCGGATCTCATCCTGTCGAATCCCTCTACGAAACTGTAAGTTCCTCTCTCGCTCTCGCTATCGCCATTTTATATAATGCAGAACAGTGAATTGGAAGTAAATTTCTTCAATCTAAGTTGCCCTATTTGATCTCTGTATGGATTTCTCTGTTTAGTAGTTGCAGTTAGACTAGATTGTTATTGGAAATAGAATCTAGGTTCGAGGGAGCTGATGAACTCACTGTTTTGCCTAAGTTGCTTGGATTAGGAACTTGAAGTTTTATTTGCTGGCTAGTGGTTAATTTTCTTTATTATACCCTTATTATGGATTTCTCTGTTTAGTAGTTGCAGTTAGACTAGATTGTTATTGGAAATAGAATCTAGGTTCGAGGGAGCTGATGAACTCACTGTTTTGCCTAAGTTGCTTGGATTAGGAACTTGAAGTTTTATTTGCTGGCTAGTGGTTAATTTTCTTTATTATACCCTTATTATGAATTTTGTTAGAGTCCATCCTTTAAAGTTTTGTAAATAGTGGTGGCATCTGTGATCTGCCGACTCTCAGTGTCTTCAAATTCATCTCTTCTTACTGAAATGTGCATGACTTAGTGATTTTCCTCACATGCGATTCGACATTTTTATGGGAAAAACCTTCAAAGAATTCCGAATTTCCGGGTAAAGGACAGTGGTGAAAATAGGTTATGCTCTCAATTAGATCGCCATGAAGAGGGCATAAGCATCGAAAAGCCTCTTTTGTCTTGAGTACAGGGTTGGGATGCTTCTCTCTTTGTTTTTTCTTTCTTCATTTGCTTAAAGACTTCTTTTTTACCAAAATAAAATCTTATGACAGCACCAGAGAACATTAGTTTGCACTCAGAACAGTTATGAGATAAACCCATAATTCTTTCAAACAATTCTAGACATCGAATTTGGTTTAGTTGCATAATAACCATGAGGTATCCACCAAGAAAGGTGTATCAACCACAATTTTTCTTGTAAGAGTTAAGATAAAGTATAAAAAAAGCTTAACTGGTTGGTTAGAAACTTAGAACAATTCATGTCAGTCTGATATATGTATATCCTTGTTTTCTTGATTTAGACAAGGAGAACAGAAGAGGAGATGAAAAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTCGGTATGGTTATTCTTTTTGCATAGATTCGGTTTCTCCTTTGTTGTGTTGAAATTGGTGCACTTGTGCAAAAGAAATATTACACCAAAATCTGCAGTTTTGTTATTCATTTTATTTTATTTTTAACTAAATGACTTCACTAATCGTTGTCTTATAATGATTCAGTGGGGGAGAAAAAAATTCACTCCACTGGCTCTTCTACATCATGTGATTTGCTCTCTTTGTATGCATGTCAAATTTATTCTTTCTAGCCCCAAGTATATGGCATGAACGAAATAGATTAAACCATTGGATGCGGTAAAAGTATCTCTTTGTTCTTTTCTTATGGACAATTCATCAGACCATTATGATGCCAACTTTGCAACTACTGGAAATGTGGTGGGTGCACTTTCCCCCCTCATTCCATGATAGGTTAGTGCCATGAAAATAGGACGTCTCTTGTGGATTTGATGTTTGATGTGCATGAATTTCATTAGGGACCCTCCAATCTGAGTCCTGCTTTTCTTTTCTTTTCACCAACAGTTTCAACCGATGATGCCCAAGTCAGGCTACTTTAAGTTATTGTCTTATTGGAACTTGGAAGTCATTTCTAATATAATTTCAATTCTAACTCAACGCTATTGCAGATTTCAAAGGCCTCCAGGACCTATTCCATCCTCAATGCTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGGTAAAATGGGAATTTATGAAGTCGCCTATATAACTCATCTGATTCTGCTGTTCTCTATATTCTTTTGTGTTATTAGTGAGAGTTCTCAATTACCTTGATTGTTTCTTTTTCTTAATAAATTTTTTTATTACTCATATAAAACACGAATTACCCCTATTCCTTGAATCTTTCGTGTTGAGATTTGAAGAACAAGGACGAGAGGGATTAAGGATCTTGAATTCCTCAGTTTTAAGCATCCCTCTAGGACCAGTGACATGAATTACATTAATGGCCTGTTAGTAGAAGCTCGTAAGACTTTCTGCTGCTTCTGATAACCAATATACATAGAATTTTCCAACATCTGGTTTGTATTCTTGATCTCCTGTTGCCTTTTGTGATTCTACAAAATGCCCATTTTAGATAATAGTCTCTGCTGGTGTTTAGTTTATCTACAATTTCTTATGTTGACGTCTTTTGCAGACCCGAGGGAGTCCGAATCTTTGAGGCCATCGGACATGCACCATGGAATGGAAGTCCGCCTTGGTCTGTCCAAGGGACCAGTTTGCCCAAGTTTCATGTAA

mRNA sequence

ATGGATTTTGATCCTGAGGAACAAGTGTTCATATTTTGTAATTTCAAAACAGGATGCAAGGTTCCATGCTGTAATTTAGGATCCTGTGGTGAGACGATTAACGACTCGAAGGTGAGAGAGACGATCAACGACTCGGAGACAAGGAGAACAGAAGAGGAGATGAAAAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTCGATTTCAAAGGCCTCCAGGACCTATTCCATCCTCAATGCTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCGAGGGAGTCCGAATCTTTGAGGCCATCGGACATGCACCATGGAATGGAAGTCCGCCTTGGTCTGTCCAAGGGACCAGTTTGCCCAAGTTTCATGTAA

Coding sequence (CDS)

ATGGATTTTGATCCTGAGGAACAAGTGTTCATATTTTGTAATTTCAAAACAGGATGCAAGGTTCCATGCTGTAATTTAGGATCCTGTGGTGAGACGATTAACGACTCGAAGGTGAGAGAGACGATCAACGACTCGGAGACAAGGAGAACAGAAGAGGAGATGAAAAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTCGATTTCAAAGGCCTCCAGGACCTATTCCATCCTCAATGCTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCGAGGGAGTCCGAATCTTTGAGGCCATCGGACATGCACCATGGAATGGAAGTCCGCCTTGGTCTGTCCAAGGGACCAGTTTGCCCAAGTTTCATGTAA

Protein sequence

MDFDPEEQVFIFCNFKTGCKVPCCNLGSCGETINDSKVRETINDSETRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM

Homology

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BLAST of Lcy09g002790 vs. ExPASy Swiss-Prot
Match: Q0DWQ7 (Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 63  YGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESE 119
           YGSAF ++ DLD QILS+FQRPPG +PSSMLG EALTGSLDDFGFEDYLN    SE
Sbjct: 59  YGSAFNIRKDLDAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASE 114

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BLAST of Lcy09g002790 vs. ExPASy Swiss-Prot
Match: Q55G18 (Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=pomp PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.6e-10
Identity = 35/88 (39.77%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 49  RTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFE 108
           +TE ++K   + N +G+   +  ++++QI S+F+R P  + SSM+GLE + G  +DF F 
Sbjct: 37  KTEIKLKNFAMKNVFGTHMVMNNEIEKQIYSQFKRLP-TLQSSMVGLETILGLDEDFDFG 96

Query: 109 DYLNDPRESESLRPSDMHHGMEVRLGLS 137
           DYL DP  SE+  P  +H  ME RLG++
Sbjct: 97  DYLCDPATSEAPLP-QLHTSMEHRLGMT 122

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BLAST of Lcy09g002790 vs. ExPASy Swiss-Prot
Match: Q3SZV5 (Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 32/94 (34.04%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 42  INDSETRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGS 101
           +++   +  +++M    L N  G   PLK+ ++ + + + QR P  +PSS L L+ L G+
Sbjct: 50  LSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQQVQRLPF-LPSSNLSLDILRGN 109

Query: 102 LDDFGFEDYLNDPRESESLRPSDMHHGMEVRLGL 136
            +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 110 DETIGFEDILNDPSQSELM--GEPHLMVEYKLGL 140

[Close]

BLAST of Lcy09g002790 vs. ExPASy Swiss-Prot
Match: Q9Y244 (Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.6e-06
Identity = 31/94 (32.98%), Postives = 53/94 (56.38%), Query Frame = 0


Query: 42  INDSETRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGS 101
           +++   +  +++M    L N  G   PLK+ ++ + + + QR P  + SS L L+ L G+
Sbjct: 50  LSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQQVQRLPF-LSSSNLSLDVLRGN 109

Query: 102 LDDFGFEDYLNDPRESESLRPSDMHHGMEVRLGL 136
            +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 110 DETIGFEDILNDPSQSEVM--GEPHLMVEYKLGL 140

[Close]

BLAST of Lcy09g002790 vs. ExPASy Swiss-Prot
Match: Q9CQT5 (Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.6e-06
Identity = 31/94 (32.98%), Postives = 53/94 (56.38%), Query Frame = 0


Query: 42  INDSETRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGS 101
           +++   +  +++M    L N  G   PLK+ ++ + + +  R P  +PSS L L+ L G+
Sbjct: 50  LSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQQVHRLPF-LPSSNLSLDILRGN 109

Query: 102 LDDFGFEDYLNDPRESESLRPSDMHHGMEVRLGL 136
            +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 110 DETIGFEDILNDPSQSELM--GEPHVMVEHKLGL 140

[Close]

BLAST of Lcy09g002790 vs. ExPASy TrEMBL
Match: A0A6J1JRS1 (cyclin-B1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111486973 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 8.6e-49
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 47  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 106
           TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG
Sbjct: 43  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 102

Query: 107 FEDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           FEDYLNDPRESESLRP DMHHGMEVRLGLSKGPVCPSFM
Sbjct: 103 FEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Lcy09g002790 vs. ExPASy TrEMBL
Match: A0A5D3BR37 (Cyclin-B1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001840 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.9e-48
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 47  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 106
           TRRT+EEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG
Sbjct: 43  TRRTQEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 102

Query: 107 FEDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           FEDYLNDPRESESLRP DMHHGMEVRLGLSKGPVCPSFM
Sbjct: 103 FEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Lcy09g002790 vs. ExPASy TrEMBL
Match: A0A1S3CAQ6 (cyclin-B1-2 OS=Cucumis melo OX=3656 GN=LOC103498587 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.9e-48
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 47  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 106
           TRRT+EEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG
Sbjct: 43  TRRTQEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 102

Query: 107 FEDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           FEDYLNDPRESESLRP DMHHGMEVRLGLSKGPVCPSFM
Sbjct: 103 FEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Lcy09g002790 vs. ExPASy TrEMBL
Match: A0A0A0KUK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.5e-48
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 47  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 106
           TRRT+EEMKRK+LVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG
Sbjct: 43  TRRTQEEMKRKVLVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 102

Query: 107 FEDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           FEDYLNDPRESESLRP DMHHGMEVRLGLSKGPVCPSFM
Sbjct: 103 FEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Lcy09g002790 vs. ExPASy TrEMBL
Match: A0A6J1GWZ3 (cyclin-B1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111458201 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.5e-48
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 47  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 106
           TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG
Sbjct: 43  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 102

Query: 107 FEDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           FEDYLNDPRESESLRP DMHHG+EVRLGLSKGPVCPSFM
Sbjct: 103 FEDYLNDPRESESLRPLDMHHGIEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Lcy09g002790 vs. NCBI nr
Match: XP_038889455.1 (cyclin-B1-2-like [Benincasa hispida])

HSP 1 Score: 203.0 bits (515), Expect = 1.8e-48
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 47  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 106
           TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG
Sbjct: 43  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 102

Query: 107 FEDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           FEDYLNDPRESESLRP DMHHGMEVRLGLSKGPVCPSFM
Sbjct: 103 FEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Lcy09g002790 vs. NCBI nr
Match: KAG7033243.1 (Cyclin-B1-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.0 bits (515), Expect = 1.8e-48
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 47  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 106
           TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG
Sbjct: 43  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 102

Query: 107 FEDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           FEDYLNDPRESESLRP DMHHGMEVRLGLSKGPVCPSFM
Sbjct: 103 FEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Lcy09g002790 vs. NCBI nr
Match: XP_022989933.1 (cyclin-B1-2-like [Cucurbita maxima])

HSP 1 Score: 203.0 bits (515), Expect = 1.8e-48
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 47  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 106
           TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG
Sbjct: 43  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 102

Query: 107 FEDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           FEDYLNDPRESESLRP DMHHGMEVRLGLSKGPVCPSFM
Sbjct: 103 FEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Lcy09g002790 vs. NCBI nr
Match: XP_008459455.1 (PREDICTED: cyclin-B1-2 [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 3.9e-48
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 47  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 106
           TRRT+EEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG
Sbjct: 43  TRRTQEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 102

Query: 107 FEDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           FEDYLNDPRESESLRP DMHHGMEVRLGLSKGPVCPSFM
Sbjct: 103 FEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Lcy09g002790 vs. NCBI nr
Match: KAA0039381.1 (cyclin-B1-2 [Cucumis melo var. makuwa] >TYK00569.1 cyclin-B1-2 [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 3.9e-48
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 47  TRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 106
           TRRT+EEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG
Sbjct: 43  TRRTQEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFG 102

Query: 107 FEDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           FEDYLNDPRESESLRP DMHHGMEVRLGLSKGPVCPSFM
Sbjct: 103 FEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Lcy09g002790 vs. TAIR 10
Match: AT5G38650.1 (Proteasome maturation factor UMP1 )

HSP 1 Score: 170.6 bits (431), Expect = 9.1e-43
Identity = 77/98 (78.57%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 48  RRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGF 107
           ++++EEMKR+++ +TYG+A PLKMDLDRQILSRFQRPPGPIPSSMLGLE  TG+LD+FGF
Sbjct: 44  KQSQEEMKRRVITHTYGAALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGF 103

Query: 108 EDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           EDYLNDPRESE+L+P D HHGMEVRLGLSKGP  PSFM
Sbjct: 104 EDYLNDPRESETLKPVDFHHGMEVRLGLSKGPASPSFM 141

[Close]

BLAST of Lcy09g002790 vs. TAIR 10
Match: AT5G38660.2 (acclimation of photosynthesis to environment )

HSP 1 Score: 170.6 bits (431), Expect = 9.1e-43
Identity = 77/98 (78.57%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 48  RRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGF 107
           ++++EEMKR+++ +TYG+A PLKMDLDRQILSRFQRPPGPIPSSMLGLE  TG+LD+FGF
Sbjct: 334 KQSQEEMKRRVITHTYGAALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGF 393

Query: 108 EDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           EDYLNDPRESE+L+P D HHGMEVRLGLSKGP  PSFM
Sbjct: 394 EDYLNDPRESETLKPVDFHHGMEVRLGLSKGPASPSFM 431

[Close]

BLAST of Lcy09g002790 vs. TAIR 10
Match: AT1G67250.1 (Proteasome maturation factor UMP1 )

HSP 1 Score: 161.0 bits (406), Expect = 7.2e-40
Identity = 73/106 (68.87%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 40  ETINDSETRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALT 99
           E+  +SE ++++E +KR ++ + YG+A PLKMD+DRQILSRFQRPPGPIPSSMLGLE  T
Sbjct: 37  ESSYESE-KKSKEALKRTVIAHAYGTALPLKMDMDRQILSRFQRPPGPIPSSMLGLEVYT 96

Query: 100 GSLDDFGFEDYLNDPRESESLRPSDMHHGMEVRLGLSKGPVCPSFM 146
           G++DDFGFEDYLNDPR+SE+ +P D HHGMEVRLG+SKGP+ PSFM
Sbjct: 97  GAVDDFGFEDYLNDPRDSETFKPVDFHHGMEVRLGISKGPIYPSFM 141

[Close]

BLAST of Lcy09g002790 vs. TAIR 10
Match: AT1G62920.1 (CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-09
Identity = 34/71 (47.89%), Postives = 37/71 (52.11%), Query Frame = 0


Query: 66  AFPLKMDLDRQILSRF------------------------QRPPGPIPSSMLGLEALTGS 113
           A PLKMDLDR IL R+                         RP GPIPS ML LE  TG+
Sbjct: 4   ALPLKMDLDRPILPRYGMLDQYHYEIIPLNSDAYSAIRYENRPTGPIPSLMLDLEVYTGA 63

The following BLAST results are available for this feature:

BLAST of Lcy09g002790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0DWQ7	1.3e-17	76.79	Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1	[more]
Q55G18	7.6e-10	39.77	Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=po...	[more]
Q3SZV5	1.3e-06	34.04	Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1	[more]
Q9Y244	8.6e-06	32.98	Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1	[more]
Q9CQT5	8.6e-06	32.98	Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1	[more]

BLAST of Lcy09g002790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRS1	8.6e-49	98.99	cyclin-B1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111486973 PE=4 SV=1	[more]
A0A5D3BR37	1.9e-48	97.98	Cyclin-B1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001840 P...	[more]
A0A1S3CAQ6	1.9e-48	97.98	cyclin-B1-2 OS=Cucumis melo OX=3656 GN=LOC103498587 PE=4 SV=1	[more]
A0A0A0KUK6	2.5e-48	96.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1	[more]
A0A6J1GWZ3	2.5e-48	97.98	cyclin-B1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111458201 PE=4 SV=1	[more]

BLAST of Lcy09g002790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889455.1	1.8e-48	98.99	cyclin-B1-2-like [Benincasa hispida]	[more]
KAG7033243.1	1.8e-48	98.99	Cyclin-B1-2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022989933.1	1.8e-48	98.99	cyclin-B1-2-like [Cucurbita maxima]	[more]
XP_008459455.1	3.9e-48	97.98	PREDICTED: cyclin-B1-2 [Cucumis melo]	[more]
KAA0039381.1	3.9e-48	97.98	cyclin-B1-2 [Cucumis melo var. makuwa] >TYK00569.1 cyclin-B1-2 [Cucumis melo var...	[more]

BLAST of Lcy09g002790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38650.1	9.1e-43	78.57	Proteasome maturation factor UMP1	[more]
AT5G38660.2	9.1e-43	78.57	acclimation of photosynthesis to environment	[more]
AT1G67250.1	7.2e-40	68.87	Proteasome maturation factor UMP1	[more]
AT1G62920.1	1.0e-09	47.89	CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR00801...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008012	Proteasome maturation factor Ump1	PFAM	PF05348	UMP1	coord: 46..133 e-value: 2.3E-24 score: 85.8
IPR008012	Proteasome maturation factor Ump1	PANTHER	PTHR12828	PROTEASOME MATURATION PROTEIN UMP1	coord: 33..145
None	No IPR available	PANTHER	PTHR12828:SF8	BNAA07G25120D PROTEIN	coord: 33..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g002790.1	Lcy09g002790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043248	proteasome assembly
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000502	proteasome complex