Lcy09g002400 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCAACTTCCAATGTGTTACAACCCTTTAATTTATTATACATTGTTCAACAACTGCATAGACTACGCATTTAGAACCCAAGTAGCTAGCTACTTCATATAGAATCCTTTCACCTCTAGCTCCTTTATTTTTTATCTCCCATTGTCATTATAATATCAATTTCATTCAGCTGCTTTGGATCTTGAAATCTCTCAGATCTGTCTAACAAAAGAGAGATCTCTTTCAGTGCTAAATTTTTGCTTCAAGATGCAAAGTGGAAACTACGACCAAATCTCTCAAAAACCCCTTCAAATCAAACATGAAGATGGATTCTTCACAAGGGCTCTATCCAAAGAGCCTAATTCCGCCGCCAACTCTTCTTTTAGAGTCTACTACGGCGGCGCCGCCGGTGCAATTCCGTTCAGGTGGGAGTCCCGGCCGGGCACTCCAAAGCATACTTTTTCAGAAACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCTCTTCACATTCTACCTCCAAGTCCTCTTCCAAACCAACCCTTTTGAGCTCGATTTTTCCCCGGCTCACGCCGAGGAAATCTCGAACCTCCTCGTCATTCTCCTTCTCCTCTGGCTCTTCCTCCTCTTCGTCCTTGGCGTCGTGGTCGTCCTCTCGCTCTTCGTCCTGCTCGTCGCCATCGCCTTTCGTGAGACCGAAATTCTTCAAGCGTCGTCGGCGCTCCTTGGATTCTCCGAGCCTGCCGTTCGAGCATAATTTCGACGACAACGACGGGGACGAGGCGGTGGGGAGCTCGAATTCTCCGACGTCGACTTTGTGCTTTGGTGGCTCTTCAAGTAGAGCTTCATTATTCGGAGGTTGTTACCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGCCGAGGTACCGTTAATTAGTTGACGTAATTTGCAGTGTGAATGAAATTAGTTAATTCCCATAAGGCCTTTTGTTTTTGTTTTTTGTCTATTTGTTTGATCTTCTCATTGTGTCTTTGTGTGGAGTTTAATGTTTTGGGCTATTAGGCTCAAACATCAGTTTGTTGAATGGCATATCTCATGTCAAAATATATATCAAAATCAAAACATTTTTAGTTTTATTGTAACTCTCTTTTAATTTCTCTTGCATCCAC GTCAACTTCCAATGTGTTACAACCCTTTAATTTATTATACATTGTTCAACAACTGCATAGACTACGCATTTAGAACCCAAGTAGCTAGCTACTTCATATAGAATCCTTTCACCTCTAGCTCCTTTATTTTTTATCTCCCATTGTCATTATAATATCAATTTCATTCAGCTGCTTTGGATCTTGAAATCTCTCAGATCTGTCTAACAAAAGAGAGATCTCTTTCAGTGCTAAATTTTTGCTTCAAGATGCAAAGTGGAAACTACGACCAAATCTCTCAAAAACCCCTTCAAATCAAACATGAAGATGGATTCTTCACAAGGGCTCTATCCAAAGAGCCTAATTCCGCCGCCAACTCTTCTTTTAGAGTCTACTACGGCGGCGCCGCCGGTGCAATTCCGTTCAGGTGGGAGTCCCGGCCGGGCACTCCAAAGCATACTTTTTCAGAAACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCTCTTCACATTCTACCTCCAAGTCCTCTTCCAAACCAACCCTTTTGAGCTCGATTTTTCCCCGGCTCACGCCGAGGAAATCTCGAACCTCCTCGTCATTCTCCTTCTCCTCTGGCTCTTCCTCCTCTTCGTCCTTGGCGTCGTGGTCGTCCTCTCGCTCTTCGTCCTGCTCGTCGCCATCGCCTTTCGTGAGACCGAAATTCTTCAAGCGTCGTCGGCGCTCCTTGGATTCTCCGAGCCTGCCGTTCGAGCATAATTTCGACGACAACGACGGGGACGAGGCGGTGGGGAGCTCGAATTCTCCGACGTCGACTTTGTGCTTTGGTGGCTCTTCAAGTAGAGCTTCATTATTCGGAGGTTGTTACCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGCCGAGGTACCGTTAATTAGTTGACGTAATTTGCAGTGTGAATGAAATTAGTTAATTCCCATAAGGCCTTTTGTTTTTGTTTTTTGTCTATTTGTTTGATCTTCTCATTGTGTCTTTGTGTGGAGTTTAATGTTTTGGGCTATTAGGCTCAAACATCAGTTTGTTGAATGGCATATCTCATGTCAAAATATATATCAAAATCAAAACATTTTTAGTTTTATTGTAACTCTCTTTTAATTTCTCTTGCATCCAC ATGCAAAGTGGAAACTACGACCAAATCTCTCAAAAACCCCTTCAAATCAAACATGAAGATGGATTCTTCACAAGGGCTCTATCCAAAGAGCCTAATTCCGCCGCCAACTCTTCTTTTAGAGTCTACTACGGCGGCGCCGCCGGTGCAATTCCGTTCAGGTGGGAGTCCCGGCCGGGCACTCCAAAGCATACTTTTTCAGAAACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCTCTTCACATTCTACCTCCAAGTCCTCTTCCAAACCAACCCTTTTGAGCTCGATTTTTCCCCGGCTCACGCCGAGGAAATCTCGAACCTCCTCGTCATTCTCCTTCTCCTCTGGCTCTTCCTCCTCTTCGTCCTTGGCGTCGTGGTCGTCCTCTCGCTCTTCGTCCTGCTCGTCGCCATCGCCTTTCGTGAGACCGAAATTCTTCAAGCGTCGTCGGCGCTCCTTGGATTCTCCGAGCCTGCCGTTCGAGCATAATTTCGACGACAACGACGGGGACGAGGCGGTGGGGAGCTCGAATTCTCCGACGTCGACTTTGTGCTTTGGTGGCTCTTCAAGTAGAGCTTCATTATTCGGAGGTTGTTACCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGCCGAGGTACCGTTAATTAG MQSGNYDQISQKPLQIKHEDGFFTRALSKEPNSAANSSFRVYYGGAAGAIPFRWESRPGTPKHTFSETSIPPLTPPPSYYSSSHSTSKSSSKPTLLSSIFPRLTPRKSRTSSSFSFSSGSSSSSSLASWSSSRSSSCSSPSPFVRPKFFKRRRRSLDSPSLPFEHNFDDNDGDEAVGSSNSPTSTLCFGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTVN Homology
BLAST of Lcy09g002400 vs. ExPASy TrEMBL
Match: A0A0A0K7T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 2.4e-90 Identity = 196/231 (84.85%), Postives = 205/231 (88.74%), Query Frame = 0
BLAST of Lcy09g002400 vs. ExPASy TrEMBL
Match: A0A5A7UC51 (Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005080 PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 9.1e-90 Identity = 196/232 (84.48%), Postives = 203/232 (87.50%), Query Frame = 0
BLAST of Lcy09g002400 vs. ExPASy TrEMBL
Match: A0A1S4E178 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 9.1e-90 Identity = 196/232 (84.48%), Postives = 203/232 (87.50%), Query Frame = 0
BLAST of Lcy09g002400 vs. ExPASy TrEMBL
Match: A0A6J1BX95 (Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111006479 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 2.5e-79 Identity = 179/230 (77.83%), Postives = 195/230 (84.78%), Query Frame = 0
BLAST of Lcy09g002400 vs. ExPASy TrEMBL
Match: A0A6J1HHB7 (uncharacterized protein LOC111462925 OS=Cucurbita moschata OX=3662 GN=LOC111462925 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 4.0e-77 Identity = 167/226 (73.89%), Postives = 184/226 (81.42%), Query Frame = 0
BLAST of Lcy09g002400 vs. NCBI nr
Match: XP_038885974.1 (putative protein TPRXL [Benincasa hispida]) HSP 1 Score: 344.4 bits (882), Expect = 7.7e-91 Identity = 196/230 (85.22%), Postives = 204/230 (88.70%), Query Frame = 0
BLAST of Lcy09g002400 vs. NCBI nr
Match: XP_011656432.1 (putative protein TPRXL [Cucumis sativus]) HSP 1 Score: 341.7 bits (875), Expect = 5.0e-90 Identity = 196/231 (84.85%), Postives = 205/231 (88.74%), Query Frame = 0
BLAST of Lcy09g002400 vs. NCBI nr
Match: XP_016901982.1 (PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0052017.1 putative serine-rich protein [Cucumis melo var. makuwa]) HSP 1 Score: 339.7 bits (870), Expect = 1.9e-89 Identity = 196/232 (84.48%), Postives = 203/232 (87.50%), Query Frame = 0
BLAST of Lcy09g002400 vs. NCBI nr
Match: KAE8646577.1 (hypothetical protein Csa_005771 [Cucumis sativus]) HSP 1 Score: 337.0 bits (863), Expect = 1.2e-88 Identity = 194/228 (85.09%), Postives = 202/228 (88.60%), Query Frame = 0
BLAST of Lcy09g002400 vs. NCBI nr
Match: KAG6602592.1 (hypothetical protein SDJN03_07825, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 305.1 bits (780), Expect = 5.2e-79 Identity = 172/229 (75.11%), Postives = 187/229 (81.66%), Query Frame = 0
BLAST of Lcy09g002400 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). ) HSP 1 Score: 89.4 bits (220), Expect = 4.1e-18 Identity = 87/216 (40.28%), Postives = 118/216 (54.63%), Query Frame = 0
BLAST of Lcy09g002400 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 5.8e-12 Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of Lcy09g002400 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). ) HSP 1 Score: 60.5 bits (145), Expect = 2.1e-09 Identity = 75/187 (40.11%), Postives = 95/187 (50.80%), Query Frame = 0
BLAST of Lcy09g002400 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 2.5e-07 Identity = 50/129 (38.76%), Postives = 70/129 (54.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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