Lcy09g002060 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g002060
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	NF-X1-type zinc finger protein NFXL2
Location	Chr09: 1682994 .. 1683613 (+)
RNA-Seq Expression	Lcy09g002060
Synteny	Lcy09g002060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTCAACCGCCGACCCTCGACGGACCATCTCCGACTCCGATTCTAATTCCGATGATGACAACGGCGGATCCCAATCCCTCCGTCACCTTGATCTCTCCGATTCCATTTTTAAAGCCTATTTCGAATTCACCGGCCGATCTACCACTGCCGCCGACCTATCTAAGATCCAATCCTTCCTCACCTCCTCCTCCTCCGGCGCATTGTCTTGCTTGATATGCCTCGAACGCATCAGGCTCTCCGACCCCACCTGGTCCTGTTCTTCTCTCTGTTTTGCCGTCTTTCATCTCTTCTGCATTCAGAGTTGGGCTCGCCAGGCTTCCGACTTGGCCGCCGCGCGAGCTGCCACGCGCTCTCTCGTCTCCCCCGATAAGCCCGACGAACACTCTGTGTGGAACTGTCCCAAATGCAGAGTCGAGTATTCCAAATCTTCAATTCCTAAGAGGTACTTTTGTTTCTGTGGGAAATTGGAAAACCCACCAAGCGATGATCCGTGGATTTTACCCCATTCATGTGGTGAGGTATGCGGCAGGCCATTGAAACACAATTGCGGTCATCATTGTCTGCTCTTGTGCCATCCCGGTCCTTGCCCCTCATGCCCGAAGATAGTGCAGGCTAG

mRNA sequence

ATGATCTCAACCGCCGACCCTCGACGGACCATCTCCGACTCCGATTCTAATTCCGATGATGACAACGGCGGATCCCAATCCCTCCGTCACCTTGATCTCTCCGATTCCATTTTTAAAGCCTATTTCGAATTCACCGGCCGATCTACCACTGCCGCCGACCTATCTAAGATCCAATCCTTCCTCACCTCCTCCTCCTCCGGCGCATTGTCTTGCTTGATATGCCTCGAACGCATCAGGCTCTCCGACCCCACCTGGTCCTGTTCTTCTCTCTGTTTTGCCGTCTTTCATCTCTTCTGCATTCAGAGTTGGGCTCGCCAGGCTTCCGACTTGGCCGCCGCGCGAGCTGCCACGCGCTCTCTCGTCTCCCCCGATAAGCCCGACGAACACTCTGCCATTGAAACACAATTGCGGTCATCATTGTCTGCTCTTGTGCCATCCCGGTCCTTGCCCCTCATGCCCGAAGATAGTGCAGGCTAG

Coding sequence (CDS)

ATGATCTCAACCGCCGACCCTCGACGGACCATCTCCGACTCCGATTCTAATTCCGATGATGACAACGGCGGATCCCAATCCCTCCGTCACCTTGATCTCTCCGATTCCATTTTTAAAGCCTATTTCGAATTCACCGGCCGATCTACCACTGCCGCCGACCTATCTAAGATCCAATCCTTCCTCACCTCCTCCTCCTCCGGCGCATTGTCTTGCTTGATATGCCTCGAACGCATCAGGCTCTCCGACCCCACCTGGTCCTGTTCTTCTCTCTGTTTTGCCGTCTTTCATCTCTTCTGCATTCAGAGTTGGGCTCGCCAGGCTTCCGACTTGGCCGCCGCGCGAGCTGCCACGCGCTCTCTCGTCTCCCCCGATAAGCCCGACGAACACTCTGCCATTGAAACACAATTGCGGTCATCATTGTCTGCTCTTGTGCCATCCCGGTCCTTGCCCCTCATGCCCGAAGATAGTGCAGGCTAG

Protein sequence

MISTADPRRTISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTAADLSKIQSFLTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSLVSPDKPDEHSAIETQLRSSLSALVPSRSLPLMPEDSAG

Homology

[Close]

BLAST of Lcy09g002060 vs. ExPASy Swiss-Prot
Match: Q9FFK8 (NF-X1-type zinc finger protein NFXL2 OS=Arabidopsis thaliana OX=3702 GN=NFXL2 PE=1 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-31
Identity = 76/118 (64.41%), Postives = 92/118 (77.97%), Query Frame = 0


Query: 11  ISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFE-FTGRSTTAADLSKIQSFLTSSSSGAL 70
           ISDSDS+S  D+   Q  RH DLS+SIF+AY +  +  S ++ DL+KIQSFL SSSSGA+
Sbjct: 27  ISDSDSDSGSDSENHQH-RHNDLSNSIFEAYLDCHSSSSPSSIDLAKIQSFLASSSSGAV 86

Query: 71  SCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSLVSPDKPD 128
           SCLICLERI+ +DPTWSC+S CFAVFHLFCIQSWARQ  DL AARA TR   +P +P+
Sbjct: 87  SCLICLERIKRTDPTWSCTSSCFAVFHLFCIQSWARQCLDLQAARAVTRPSSNPTEPE 143

[Close]

BLAST of Lcy09g002060 vs. ExPASy Swiss-Prot
Match: A0JMY5 (NF-X1-type zinc finger protein NFXL1 OS=Xenopus laevis OX=8355 GN=nfxl1 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.6e-05
Identity = 35/126 (27.78%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 8   RRTISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTA------ADLSKIQSFL 67
           ++   D  S+SDD++G          +D   K     T  S T+      ++L++ Q ++
Sbjct: 100 KKLAEDHYSSSDDEDGDED-------ADGKQKKILALTFTSYTSQTDGDLSELARTQQYV 159

Query: 68  TSS-SSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 127
             +  +GA++CLIC+  ++ +   WSCS  CF +FH+ CIQ WA+ +  L ++       
Sbjct: 160 NEAFQAGAVTCLICIASVKRNQAVWSCSG-CFCIFHMPCIQKWAKDSVFLVSSPLTDDDF 217

[Close]

BLAST of Lcy09g002060 vs. ExPASy Swiss-Prot
Match: Q6ZNB6 (NF-X1-type zinc finger protein NFXL1 OS=Homo sapiens OX=9606 GN=NFXL1 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-04
Identity = 32/102 (31.37%), Postives = 51/102 (50.00%), Query Frame = 0


Query: 12  SDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTAADLSKIQSFLTSSSSGALSC 71
           S S    D+D  G Q      +  + F  Y   T   T   + +K Q    +  +GA++C
Sbjct: 106 SSSSEEGDEDFEGKQG----KILANTFITYTTQTDGDTRELERTK-QYVNEAFQAGAMTC 165

Query: 72  LICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAA 114
           LIC+  ++ +   WSCS  CF +FH+ CIQ WA+ +  L ++
Sbjct: 166 LICIASVKRNQAVWSCSG-CFCIFHMPCIQKWAKDSQFLVSS 201

[Close]

BLAST of Lcy09g002060 vs. ExPASy TrEMBL
Match: A0A5D3DLJ6 (NF-X1-type zinc finger protein NFXL2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002400 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 9.0e-60
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MISTADPRRTISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTAADLSKIQSF 60
           MIST D RRT SDSDSNSDDDNGGS+SLRHLDLSDSIFKAYFEFTGRSTT ADLSKIQSF
Sbjct: 1   MISTHDHRRTTSDSDSNSDDDNGGSESLRHLDLSDSIFKAYFEFTGRSTTTADLSKIQSF 60

Query: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120
           LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL
Sbjct: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120

Query: 121 VSPDKPDEHS 131
           +SPDKPDEHS
Sbjct: 121 ISPDKPDEHS 130

[Close]

BLAST of Lcy09g002060 vs. ExPASy TrEMBL
Match: A0A0A0K7R1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G011660 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 9.0e-60
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MISTADPRRTISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTAADLSKIQSF 60
           MIST D RRT SDSDSNSDDDNGGS+SLRHLDLSDSIFKAYFEFTGRSTT ADLSKIQSF
Sbjct: 1   MISTHDHRRTTSDSDSNSDDDNGGSESLRHLDLSDSIFKAYFEFTGRSTTTADLSKIQSF 60

Query: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120
           LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL
Sbjct: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120

Query: 121 VSPDKPDEHS 131
           +SPDKPDEHS
Sbjct: 121 ISPDKPDEHS 130

[Close]

BLAST of Lcy09g002060 vs. ExPASy TrEMBL
Match: A0A1S3B324 (NF-X1-type zinc finger protein NFXL2 OS=Cucumis melo OX=3656 GN=LOC103485574 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 9.0e-60
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MISTADPRRTISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTAADLSKIQSF 60
           MIST D RRT SDSDSNSDDDNGGS+SLRHLDLSDSIFKAYFEFTGRSTT ADLSKIQSF
Sbjct: 1   MISTHDHRRTTSDSDSNSDDDNGGSESLRHLDLSDSIFKAYFEFTGRSTTTADLSKIQSF 60

Query: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120
           LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL
Sbjct: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120

Query: 121 VSPDKPDEHS 131
           +SPDKPDEHS
Sbjct: 121 ISPDKPDEHS 130

[Close]

BLAST of Lcy09g002060 vs. ExPASy TrEMBL
Match: A0A6J1JRB4 (NF-X1-type zinc finger protein NFXL2 OS=Cucurbita maxima OX=3661 GN=LOC111489116 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.9e-58
Identity = 123/131 (93.89%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MISTADPRRTISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTAADLSKIQSF 60
           MIST D RRTISDSDSNSDDDN GSQSLRHLDLSDS+FKAYFEFTGRSTT ADLSKIQSF
Sbjct: 1   MISTHDHRRTISDSDSNSDDDNTGSQSLRHLDLSDSVFKAYFEFTGRSTTTADLSKIQSF 60

Query: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120
           LTSSSSGALSCLICLERIRL DPTWSC SLCF VFHLFCIQSWARQASDLAAARAATRSL
Sbjct: 61  LTSSSSGALSCLICLERIRLMDPTWSCYSLCFDVFHLFCIQSWARQASDLAAARAATRSL 120

Query: 121 VSPDKPDEHSA 132
           VSPDKPDEHSA
Sbjct: 121 VSPDKPDEHSA 131

[Close]

BLAST of Lcy09g002060 vs. ExPASy TrEMBL
Match: A0A6J1FFH6 (NF-X1-type zinc finger protein NFXL2 OS=Cucurbita moschata OX=3662 GN=LOC111445012 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.9e-58
Identity = 122/130 (93.85%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MISTADPRRTISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTAADLSKIQSF 60
           MIST D RRTISDSDSNSDDDN GSQSLRHLDLSDS+FKAYFEFTGRSTT ADLSKIQSF
Sbjct: 1   MISTHDHRRTISDSDSNSDDDNTGSQSLRHLDLSDSVFKAYFEFTGRSTTTADLSKIQSF 60

Query: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120
           LTSSSSGALSCLICLERIRL+DPTWSC SLCF VFHLFCIQSWARQASDLAAARAATRSL
Sbjct: 61  LTSSSSGALSCLICLERIRLTDPTWSCYSLCFDVFHLFCIQSWARQASDLAAARAATRSL 120

Query: 121 VSPDKPDEHS 131
           VSPDKPDEHS
Sbjct: 121 VSPDKPDEHS 130

[Close]

BLAST of Lcy09g002060 vs. NCBI nr
Match: XP_038886402.1 (NF-X1-type zinc finger protein NFXL2 [Benincasa hispida])

HSP 1 Score: 240.7 bits (613), Expect = 8.3e-60
Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MISTADPRRTISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTAADLSKIQSF 60
           M+ST D RRTISDSDSNSDDDNGGS+SLRHLDLSDSIFKAYFEFTGRSTT ADLSKIQSF
Sbjct: 18  MMSTHDHRRTISDSDSNSDDDNGGSESLRHLDLSDSIFKAYFEFTGRSTTTADLSKIQSF 77

Query: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120
           LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL
Sbjct: 78  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 137

Query: 121 VSPDKPDEHS 131
           VSPDKPDEHS
Sbjct: 138 VSPDKPDEHS 147

[Close]

BLAST of Lcy09g002060 vs. NCBI nr
Match: XP_004138563.1 (NF-X1-type zinc finger protein NFXL2 [Cucumis sativus] >KGN45790.1 hypothetical protein Csa_005417 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 1.9e-59
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MISTADPRRTISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTAADLSKIQSF 60
           MIST D RRT SDSDSNSDDDNGGS+SLRHLDLSDSIFKAYFEFTGRSTT ADLSKIQSF
Sbjct: 1   MISTHDHRRTTSDSDSNSDDDNGGSESLRHLDLSDSIFKAYFEFTGRSTTTADLSKIQSF 60

Query: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120
           LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL
Sbjct: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120

Query: 121 VSPDKPDEHS 131
           +SPDKPDEHS
Sbjct: 121 ISPDKPDEHS 130

[Close]

BLAST of Lcy09g002060 vs. NCBI nr
Match: XP_008441467.1 (PREDICTED: NF-X1-type zinc finger protein NFXL2 [Cucumis melo] >KAA0055039.1 NF-X1-type zinc finger protein NFXL2 [Cucumis melo var. makuwa] >TYK24438.1 NF-X1-type zinc finger protein NFXL2 [Cucumis melo var. makuwa])

HSP 1 Score: 239.6 bits (610), Expect = 1.9e-59
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MISTADPRRTISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTAADLSKIQSF 60
           MIST D RRT SDSDSNSDDDNGGS+SLRHLDLSDSIFKAYFEFTGRSTT ADLSKIQSF
Sbjct: 1   MISTHDHRRTTSDSDSNSDDDNGGSESLRHLDLSDSIFKAYFEFTGRSTTTADLSKIQSF 60

Query: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120
           LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL
Sbjct: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120

Query: 121 VSPDKPDEHS 131
           +SPDKPDEHS
Sbjct: 121 ISPDKPDEHS 130

[Close]

BLAST of Lcy09g002060 vs. NCBI nr
Match: XP_022992932.1 (NF-X1-type zinc finger protein NFXL2 [Cucurbita maxima])

HSP 1 Score: 234.6 bits (597), Expect = 6.0e-58
Identity = 123/131 (93.89%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MISTADPRRTISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTAADLSKIQSF 60
           MIST D RRTISDSDSNSDDDN GSQSLRHLDLSDS+FKAYFEFTGRSTT ADLSKIQSF
Sbjct: 1   MISTHDHRRTISDSDSNSDDDNTGSQSLRHLDLSDSVFKAYFEFTGRSTTTADLSKIQSF 60

Query: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120
           LTSSSSGALSCLICLERIRL DPTWSC SLCF VFHLFCIQSWARQASDLAAARAATRSL
Sbjct: 61  LTSSSSGALSCLICLERIRLMDPTWSCYSLCFDVFHLFCIQSWARQASDLAAARAATRSL 120

Query: 121 VSPDKPDEHSA 132
           VSPDKPDEHSA
Sbjct: 121 VSPDKPDEHSA 131

[Close]

BLAST of Lcy09g002060 vs. NCBI nr
Match: KAG6578451.1 (NF-X1-type zinc finger protein NFXL2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 234.2 bits (596), Expect = 7.8e-58
Identity = 122/130 (93.85%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MISTADPRRTISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFEFTGRSTTAADLSKIQSF 60
           MIST D RRTISDSDSNSDDDN GSQSLRHLDLSDS+FKAYFEFTGRSTT ADLSKIQSF
Sbjct: 1   MISTQDHRRTISDSDSNSDDDNTGSQSLRHLDLSDSVFKAYFEFTGRSTTTADLSKIQSF 60

Query: 61  LTSSSSGALSCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSL 120
           LTSSSSGALSCLICLERIRL+DPTWSC SLCF VFHLFCIQSWARQASDLAAARAATRSL
Sbjct: 61  LTSSSSGALSCLICLERIRLTDPTWSCYSLCFDVFHLFCIQSWARQASDLAAARAATRSL 120

Query: 121 VSPDKPDEHS 131
           VSPDKPDEHS
Sbjct: 121 VSPDKPDEHS 130

[Close]

BLAST of Lcy09g002060 vs. TAIR 10
Match: AT5G05660.1 (sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors )

HSP 1 Score: 137.5 bits (345), Expect = 9.3e-33
Identity = 76/118 (64.41%), Postives = 92/118 (77.97%), Query Frame = 0


Query: 11  ISDSDSNSDDDNGGSQSLRHLDLSDSIFKAYFE-FTGRSTTAADLSKIQSFLTSSSSGAL 70
           ISDSDS+S  D+   Q  RH DLS+SIF+AY +  +  S ++ DL+KIQSFL SSSSGA+
Sbjct: 24  ISDSDSDSGSDSENHQH-RHNDLSNSIFEAYLDCHSSSSPSSIDLAKIQSFLASSSSGAV 83

Query: 71  SCLICLERIRLSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRSLVSPDKPD 128
           SCLICLERI+ +DPTWSC+S CFAVFHLFCIQSWARQ  DL AARA TR   +P +P+
Sbjct: 84  SCLICLERIKRTDPTWSCTSSCFAVFHLFCIQSWARQCLDLQAARAVTRPSSNPTEPE 140

The following BLAST results are available for this feature:

BLAST of Lcy09g002060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFK8	1.3e-31	64.41	NF-X1-type zinc finger protein NFXL2 OS=Arabidopsis thaliana OX=3702 GN=NFXL2 PE...	[more]
A0JMY5	3.6e-05	27.78	NF-X1-type zinc finger protein NFXL1 OS=Xenopus laevis OX=8355 GN=nfxl1 PE=2 SV=...	[more]
Q6ZNB6	1.8e-04	31.37	NF-X1-type zinc finger protein NFXL1 OS=Homo sapiens OX=9606 GN=NFXL1 PE=1 SV=2	[more]

BLAST of Lcy09g002060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DLJ6	9.0e-60	95.38	NF-X1-type zinc finger protein NFXL2 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0K7R1	9.0e-60	95.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G011660 PE=3 SV=1	[more]
A0A1S3B324	9.0e-60	95.38	NF-X1-type zinc finger protein NFXL2 OS=Cucumis melo OX=3656 GN=LOC103485574 PE=...	[more]
A0A6J1JRB4	2.9e-58	93.89	NF-X1-type zinc finger protein NFXL2 OS=Cucurbita maxima OX=3661 GN=LOC111489116...	[more]
A0A6J1FFH6	4.9e-58	93.85	NF-X1-type zinc finger protein NFXL2 OS=Cucurbita moschata OX=3662 GN=LOC1114450...	[more]

BLAST of Lcy09g002060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886402.1	8.3e-60	96.15	NF-X1-type zinc finger protein NFXL2 [Benincasa hispida]	[more]
XP_004138563.1	1.9e-59	95.38	NF-X1-type zinc finger protein NFXL2 [Cucumis sativus] >KGN45790.1 hypothetical ...	[more]
XP_008441467.1	1.9e-59	95.38	PREDICTED: NF-X1-type zinc finger protein NFXL2 [Cucumis melo] >KAA0055039.1 NF-...	[more]
XP_022992932.1	6.0e-58	93.89	NF-X1-type zinc finger protein NFXL2 [Cucurbita maxima]	[more]
KAG6578451.1	7.8e-58	93.85	NF-X1-type zinc finger protein NFXL2, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of Lcy09g002060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05660.1	9.3e-33	64.41	sequence-specific DNA binding transcription factors;zinc ion binding;sequence-sp...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 62..147 e-value: 2.8E-6 score: 29.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR12360:SF1	NF-X1-TYPE ZINC FINGER PROTEIN NFXL1	coord: 12..121
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 67..106
IPR034078	Transcription factor NFX1 family	PANTHER	PTHR12360	NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1	coord: 12..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g002060.1	Lcy09g002060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003700	DNA-binding transcription factor activity