Lcy09g001850 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g001850
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	GATA type zinc finger transcription factor family protein
Location	Chr09: 1504636 .. 1507577 (-)
RNA-Seq Expression	Lcy09g001850
Synteny	Lcy09g001850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAATGGTGGGTCACAATTCCTGCCAACCTGATCTTTATCTTTTATGTTCTTCTTTTCTTTTCCTTTTAATTATTTGTAATGGGTTGTAATCAGATTCATTAAAGCATAAATCTTTCTTAATTTTTTCTCTTCATTATTATTATTCCTTTTTCTAATAATTCTTTATCCCAAATTCGAACATAAAACTCCCACTACGCTGCGATAAAAAGGGGTCCAATCCAATCCCTGTTCTTGGTTTTCTCCTCTTCCCTCTATTTTTCTCGCTTTTCCCATCGGCCCCTCGAATTTCTCTGACGATTTCGCTTTTGGGTTCTCTGTTTTGGCTCTCTTGCTTCGCAGATCCACCATTTTTTCAATCTCTAACCTCAGGTATGCGATTTTAATTCGATTTTGTTTCACATTTCCCAGCTCCCGGATCATGATCGATTTTTGTTTTTGAGATCTTTGCTGCCTCTTTTGGTTGTTGAGCGGTCGTTTTTCTGCGTTTGTTGGCTTGAGATTGAAGTTTGTTCGTTGCAATTTTATAATCTAATCTTGAATGGGATTGGAAGTTTTAAATTAATTTCTGTCTGTCGATATATCTATGCATTTTCTTCTACACGAAACCAAAGTGATTTGAGAAGCATCTATTTTCTGTCCGATTAATGTAGTTATGATTTTGATCTAACAAAACAGAGGAGGGAAGTTAGCTCTGAGAGTTGGGGATTGATCATCTTAGTTTGGTGAAAAAGGCTCAGATCTAAATCCAAAGGCTTAGCTATGTCTTTCACTGGCACACAACAAAAGTGCAAGGCCTGCGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCCGATGGAATTACCTACCACAAGTCTTGCTTCAAATGCTCCCATTGCAAAGGGACTCTGAAGGTATTGCTTTGTGTTTTTTTAGCTGGATTCTGATCTTCAAGATTCCTAAATCGTCAATAAACCAAAGGGTTATGATTTATTTATTCCTTTATTTGTATTTCAGAAGCTCTGATGTCATGTTAATTGACATCTAAACCAAAAAGTGTAAGTTGATAAACTGTAATATATATATTCTTTTACATGTAATCTTAACAATAATTCTTCTGCTCATTATACAGGGAATTTAATGCATCTAGCCAAACTATTTTCTAAAGGATATTTAAATGTGGTATCAACTTCTGTCTTAAGTATCCATCTGTTGATGTATCTATCACAAGTAAATACAATCTAGTTTAAGGGATACATCAATGGTTCCAAAGTATGGTTAGAATTAGGCATATGGCATTTAACAGTGAATAGGACCTAAAATATCTAGCATAATGACCCTTGATCTTGATTCGAACGATGACAAAAGATTTTCTTGAAGGATTGGAAGGTGATTGATGTTTTGAAAATTGTAACTCCATCTTGCTGTTGTTTAACCTTGTTCTCTGTTTGCCTTCAGCTGAGCAATTATTCTTCAATGGAAGGTGTTCTGTACTGTAAGCCTCATTTTGAGCAGCTCTTCAAGGAGACAGGCAACTTCAACAAGAACTTCCAATCTCGTACGTTCCTATCTTCTTTCAGATAACTTTATGTTTCATTTGCCAAAAATTCTGCTTTCATATGTTTAATTGTTTTTGAGTTTTATTTTCAACAGCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGGTAATTTCCTGCTGAAATTAGTTATAATTTGATCTTGAGGAGTTTTATCTCCTTGATTAGGCTGTGTATTGCAACTGATTCTTATAATGACTTACTGGTTTCAGACTAGGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTATAGACAAATGTGCTACTTGTGGTAAAACTGTTTATCCTCTAGAGAAGGTAACCACTAACTGAGATCTTGACAAATAATTCATTATCCTCCTCCCCTTCAACAAAAGAGAGAGAGCAAACATCTGTTAGAACATCCAATCTACGAATGAACATCTGTTAGAGCAGGCTAATTAGTTTGGGTACAATGTTAAAATCTTTATAAGCTTTTCTATAAAGCTGTGAAGATACAAAATCTGAACAGCATCGTTGGGGCTTTGTGAATGCTCTTAGTTGCATAGATTACAATATCCATCACATCCTGCAATACACACACACAAGAAAAACGAAGGTTGAATATGAGTTTAGTCTCCAAACTTTTAGGTTTGTGTCTATTTGACTCATGAACTTTAAAAGGTCTCTTGACATTCTATTTTATATCCAATAGGCCTCTGAACTTTCAATTTTGTATCTTATAGGTACCTGAATGTATCTAATAGGTCCTTAAACATTCAATTTTGAATCTAATAGGTCCAAATAAGAAAAAGAAAAATGAAAGTAGTTGCATCATCTTTATTTACATATGTTATACTTATATCAATTCCATGGCTATTGGTTCATAAATTTGAGGAGGATTACAAGAATCTGTTATTACAAATACTTGCAGGTAACAGTTGAAAGCCAATGCTTTCACAAGTCCTGTTTTAAGTGCTCCCATGGAGGGTGTGCTATATCCCCATCAAATTATGCTGCCTTGGAGGGAATCCTATATTGCAAACACCACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTGCTGCTGCCTCCGTTCCCGAAGCTTGAATTTCTAATTCTCGCATCGTCATTCACGGTTTCGGACCTAACTCTCTATTTACCTGAATGTGTTTAACTTAAAACTTTATGATTTCAAGATGGGAAAAAGGGAAAAGGCAAAATATATATATATCTATATTTACCATCATTTCGGCTCGTGTGTTTGTTTGGGCAAACTGTTGCATTTGATCGATATTTGAGGTGCAAAGCTTATATATGATTTCCAGGATTTGCATATTTGAGCATTATGCATTTTGTTTTCGTGCATACAAAAATTATAC

mRNA sequence

AATTAATGGTGGGTCACAATTCCTGCCAACCTGATCTTTATCTTTTATGTTCTTCTTTTCTTTTCCTTTTAATTATTTGTAATGGGTTGTAATCAGATTCATTAAAGCATAAATCTTTCTTAATTTTTTCTCTTCATTATTATTATTCCTTTTTCTAATAATTCTTTATCCCAAATTCGAACATAAAACTCCCACTACGCTGCGATAAAAAGGGGTCCAATCCAATCCCTGTTCTTGGTTTTCTCCTCTTCCCTCTATTTTTCTCGCTTTTCCCATCGGCCCCTCGAATTTCTCTGACGATTTCGCTTTTGGGTTCTCTGTTTTGGCTCTCTTGCTTCGCAGATCCACCATTTTTTCAATCTCTAACCTCAGAGGAGGGAAGTTAGCTCTGAGAGTTGGGGATTGATCATCTTAGTTTGGTGAAAAAGGCTCAGATCTAAATCCAAAGGCTTAGCTATGTCTTTCACTGGCACACAACAAAAGTGCAAGGCCTGCGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCCGATGGAATTACCTACCACAAGTCTTGCTTCAAATGCTCCCATTGCAAAGGGACTCTGAAGCTGAGCAATTATTCTTCAATGGAAGGTGTTCTGTACTGTAAGCCTCATTTTGAGCAGCTCTTCAAGGAGACAGGCAACTTCAACAAGAACTTCCAATCTCCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGACTAGGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTATAGACAAATGTGCTACTTGTGGTAAAACTGTTTATCCTCTAGAGAAGGTAACAGTTGAAAGCCAATGCTTTCACAAGTCCTGTTTTAAGTGCTCCCATGGAGGGTGTGCTATATCCCCATCAAATTATGCTGCCTTGGAGGGAATCCTATATTGCAAACACCACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTGCTGCTGCCTCCGTTCCCGAAGCTTGAATTTCTAATTCTCGCATCGTCATTCACGGTTTCGGACCTAACTCTCTATTTACCTGAATGTGTTTAACTTAAAACTTTATGATTTCAAGATGGGAAAAAGGGAAAAGGCAAAATATATATATATCTATATTTACCATCATTTCGGCTCGTGTGTTTGTTTGGGCAAACTGTTGCATTTGATCGATATTTGAGGTGCAAAGCTTATATATGATTTCCAGGATTTGCATATTTGAGCATTATGCATTTTGTTTTCGTGCATACAAAAATTATAC

Coding sequence (CDS)

ATGTCTTTCACTGGCACACAACAAAAGTGCAAGGCCTGCGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCCGATGGAATTACCTACCACAAGTCTTGCTTCAAATGCTCCCATTGCAAAGGGACTCTGAAGCTGAGCAATTATTCTTCAATGGAAGGTGTTCTGTACTGTAAGCCTCATTTTGAGCAGCTCTTCAAGGAGACAGGCAACTTCAACAAGAACTTCCAATCTCCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGACTAGGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTATAGACAAATGTGCTACTTGTGGTAAAACTGTTTATCCTCTAGAGAAGGTAACAGTTGAAAGCCAATGCTTTCACAAGTCCTGTTTTAAGTGCTCCCATGGAGGGTGTGCTATATCCCCATCAAATTATGCTGCCTTGGAGGGAATCCTATATTGCAAACACCACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTGCTGCTGCCTCCGTTCCCGAAGCTTGA

Protein sequence

MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEKVTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRAAASVPEA

Homology

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BLAST of Lcy09g001850 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.1e-92
Identity = 158/189 (83.60%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTQQKCKACEKTVY VE LSADG+ YHKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGT +KCATC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RAAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of Lcy09g001850 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.3e-91
Identity = 157/190 (82.63%), Postives = 174/190 (91.58%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTQQKC+ACEKTVYPVE LSADGI+YHK+CFKCSHCK  L+LSNYSSMEGV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKS-AEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLE 120
           HFEQLFKE+G+F+KNFQSPAK   +K TPEL R+PS+ AGMFSGT DKCATC KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASM 180
           KVTVESQC+HKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KRAAASVPEA 190
           KRA A+   A
Sbjct: 181 KRATAAATAA 190

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BLAST of Lcy09g001850 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.0e-70
Identity = 116/184 (63.04%), Postives = 154/184 (83.70%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KC  C+KTVY V+ LS +G+ YHKSCF+C+HCKGTL++SNYSSM+GVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKE+GNF+KNFQ P K+ +   PELTR+PSK + +F GT DKCA C KTVYPLEK
Sbjct: 61  HFEQLFKESGNFSKNFQ-PGKTEK---PELTRTPSKISSIFCGTQDKCAACEKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           + +E +CFHK+CF+C+HGGC ++ S+YA+L+ +LYC+HHF+QLF EKG+Y H++++A+ +
Sbjct: 121 IQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHR 180

Query: 181 RAAA 185
           R A+
Sbjct: 181 RTAS 180

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BLAST of Lcy09g001850 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.7e-70
Identity = 121/185 (65.41%), Postives = 152/185 (82.16%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKAC+KTVY ++ L+ +G TYHKSCF+C+HCKGTL +SNYSSM+GVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKE+GN++KNFQ  A   EK    LTR+PSK +  FSGT DKCATC KTVYPLEK
Sbjct: 61  HFEQLFKESGNYSKNFQ--AGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VT+E + +HK+CF+C+H GC ++ S+YA+L G+LYCK HF+QLF EKGSYNH+ ++A+  
Sbjct: 121 VTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANH 180

Query: 181 RAAAS 186
           R +AS
Sbjct: 181 RRSAS 183

[Close]

BLAST of Lcy09g001850 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.6e-68
Identity = 121/189 (64.02%), Postives = 146/189 (77.25%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTQ KC AC+KTV+ ++ L+ADG+ YHK+CFKCSHCKG L + +YSSM+GVLYCK 
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKETG+F+K F    +S +K   EL R+PSK    FSGT DKCA C KTVYPLEK
Sbjct: 61  HFEQLFKETGSFSKKFAPGCRSTDK---ELARAPSKICSAFSGTQDKCAACQKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL-IKSASM 180
           +T+E + +HKSCFKCSHGGC ++ S+YAAL G+LYCK HF QLF EKGSYNH+  KS S 
Sbjct: 121 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQ 180

Query: 181 KRAAASVPE 189
           +     VPE
Sbjct: 181 EVLPEVVPE 186

[Close]

BLAST of Lcy09g001850 vs. ExPASy TrEMBL
Match: A0A1S3B3E4 (LIM domain-containing protein WLIM2b OS=Cucumis melo OX=3656 GN=LOC103485550 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.8e-102
Identity = 180/189 (95.24%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVYPVEQLSADG++YHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGT DKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RAAASVPEA 190
           R+AA VPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of Lcy09g001850 vs. ExPASy TrEMBL
Match: A0A0A0KAA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009480 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.8e-102
Identity = 180/189 (95.24%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVYPVEQLSADG++YHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGT DKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RAAASVPEA 190
           R+AA VPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of Lcy09g001850 vs. ExPASy TrEMBL
Match: A0A6J1K140 (LIM domain-containing protein WLIM2b OS=Cucurbita maxima OX=3661 GN=LOC111489197 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 8.7e-102
Identity = 179/189 (94.71%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVYPVEQLS DG++YHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGT DKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RAAASVPEA 190
           R AASVPEA
Sbjct: 181 RPAASVPEA 189

[Close]

BLAST of Lcy09g001850 vs. ExPASy TrEMBL
Match: A0A6J1FFI9 (LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC111445264 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 8.7e-102
Identity = 179/189 (94.71%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVYPVEQLS DG++YHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGT DKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RAAASVPEA 190
           R AASVPEA
Sbjct: 181 RPAASVPEA 189

[Close]

BLAST of Lcy09g001850 vs. ExPASy TrEMBL
Match: A0A6J1BZQ6 (LIM domain-containing protein WLIM2b-like OS=Momordica charantia OX=3673 GN=LOC111006716 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.1e-101
Identity = 179/189 (94.71%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVYPVEQLSADG+ YHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGT DKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQCFHK CFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RAAASVPEA 190
           R AASVPEA
Sbjct: 181 RTAASVPEA 189

[Close]

BLAST of Lcy09g001850 vs. NCBI nr
Match: XP_038884117.1 (LIM domain-containing protein WLIM2b [Benincasa hispida] >XP_038884118.1 LIM domain-containing protein WLIM2b [Benincasa hispida])

HSP 1 Score: 385.2 bits (988), Expect = 3.3e-103
Identity = 183/189 (96.83%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTQQKCKACEKTVYPVEQLSADGI+YHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYPVEQLSADGISYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGT DKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RAAASVPEA 190
           R+AA VPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of Lcy09g001850 vs. NCBI nr
Match: XP_004138434.1 (LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_008441430.1 PREDICTED: LIM domain-containing protein WLIM2b [Cucumis melo] >XP_008441431.1 PREDICTED: LIM domain-containing protein WLIM2b [Cucumis melo] >XP_011656401.1 LIM domain-containing protein WLIM2b [Cucumis sativus] >KGN45769.1 hypothetical protein Csa_005194 [Cucumis sativus])

HSP 1 Score: 381.7 bits (979), Expect = 3.6e-102
Identity = 180/189 (95.24%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVYPVEQLSADG++YHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGT DKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RAAASVPEA 190
           R+AA VPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of Lcy09g001850 vs. NCBI nr
Match: XP_022939310.1 (LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022939311.1 LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022939312.1 LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022993072.1 LIM domain-containing protein WLIM2b [Cucurbita maxima] >XP_022993073.1 LIM domain-containing protein WLIM2b [Cucurbita maxima] >KAG7015999.1 LIM domain-containing protein WLIM2b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 379.4 bits (973), Expect = 1.8e-101
Identity = 179/189 (94.71%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVYPVEQLS DG++YHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGT DKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RAAASVPEA 190
           R AASVPEA
Sbjct: 181 RPAASVPEA 189

[Close]

BLAST of Lcy09g001850 vs. NCBI nr
Match: XP_022134482.1 (LIM domain-containing protein WLIM2b-like [Momordica charantia])

HSP 1 Score: 379.0 bits (972), Expect = 2.3e-101
Identity = 179/189 (94.71%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVYPVEQLSADG+ YHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGT DKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQCFHK CFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RAAASVPEA 190
           R AASVPEA
Sbjct: 181 RTAASVPEA 189

[Close]

BLAST of Lcy09g001850 vs. NCBI nr
Match: KAG6578438.1 (LIM domain-containing protein WLIM2b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378.3 bits (970), Expect = 4.0e-101
Identity = 178/189 (94.18%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCK+CEKTVYPVEQLS DG++YHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKSCEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGT DKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RAAASVPEA 190
           R AASVPEA
Sbjct: 181 RPAASVPEA 189

[Close]

BLAST of Lcy09g001850 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 339.7 bits (870), Expect = 1.5e-93
Identity = 158/189 (83.60%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTQQKCKACEKTVY VE LSADG+ YHKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGT +KCATC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RAAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of Lcy09g001850 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 339.7 bits (870), Expect = 1.5e-93
Identity = 158/189 (83.60%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTQQKCKACEKTVY VE LSADG+ YHKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGT +KCATC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RAAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of Lcy09g001850 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 339.7 bits (870), Expect = 1.5e-93
Identity = 158/189 (83.60%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTQQKCKACEKTVY VE LSADG+ YHKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGT +KCATC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RAAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of Lcy09g001850 vs. TAIR 10
Match: AT3G55770.4 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 339.7 bits (870), Expect = 1.5e-93
Identity = 158/189 (83.60%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTQQKCKACEKTVY VE LSADG+ YHKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGT +KCATC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RAAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of Lcy09g001850 vs. TAIR 10
Match: AT3G55770.5 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 339.7 bits (870), Expect = 1.5e-93
Identity = 158/189 (83.60%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MSFTGTQQKCKACEKTVYPVEQLSADGITYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTQQKCKACEKTVY VE LSADG+ YHKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTIDKCATCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGT +KCATC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RAAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

The following BLAST results are available for this feature:

BLAST of Lcy09g001850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M047	2.1e-92	83.60	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O04193	1.3e-91	82.63	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q1ECF5	1.0e-70	63.04	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
O80839	1.7e-70	65.41	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q7F9R9	4.6e-68	64.02	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of Lcy09g001850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3E4	1.8e-102	95.24	LIM domain-containing protein WLIM2b OS=Cucumis melo OX=3656 GN=LOC103485550 PE=...	[more]
A0A0A0KAA4	1.8e-102	95.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009480 PE=4 SV=1	[more]
A0A6J1K140	8.7e-102	94.71	LIM domain-containing protein WLIM2b OS=Cucurbita maxima OX=3661 GN=LOC111489197...	[more]
A0A6J1FFI9	8.7e-102	94.71	LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC1114452...	[more]
A0A6J1BZQ6	1.1e-101	94.71	LIM domain-containing protein WLIM2b-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Lcy09g001850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884117.1	3.3e-103	96.83	LIM domain-containing protein WLIM2b [Benincasa hispida] >XP_038884118.1 LIM dom...	[more]
XP_004138434.1	3.6e-102	95.24	LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_008441430.1 PREDICTED...	[more]
XP_022939310.1	1.8e-101	94.71	LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022939311.1 LIM do...	[more]
XP_022134482.1	2.3e-101	94.71	LIM domain-containing protein WLIM2b-like [Momordica charantia]	[more]
KAG6578438.1	4.0e-101	94.18	LIM domain-containing protein WLIM2b, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of Lcy09g001850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55770.1	1.5e-93	83.60	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	1.5e-93	83.60	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	1.5e-93	83.60	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.4	1.5e-93	83.60	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.5	1.5e-93	83.60	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 107..159 e-value: 2.4E-11 score: 53.7 coord: 9..61 e-value: 1.0E-13 score: 61.6
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 108..163 e-value: 9.1E-10 score: 38.6 coord: 10..65 e-value: 3.7E-12 score: 46.3
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.622499
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 106..166 score: 12.2167
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 104..172 e-value: 6.8E-19 score: 69.8 coord: 4..74 e-value: 5.9E-21 score: 76.4
None	No IPR available	PANTHER	PTHR24206:SF94	LIM DOMAIN-CONTAINING PROTEIN WLIM2B	coord: 1..189
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..189
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 108..168 e-value: 4.54341E-36 score: 118.342
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 1.47137E-41 score: 132.589
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 134..173
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 100..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g001850.1	Lcy09g001850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding