Lcy09g001730 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g001730
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Maternal effect embryo arrest
Location	Chr09: 1402799 .. 1403593 (-)
RNA-Seq Expression	Lcy09g001730
Synteny	Lcy09g001730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACTCACTTTACCAATCGCGTCCGTCCACTCCACTCCGCCCAGAATCCGCCCTTCCTCCGCCGTGTGCAAAATGCCGGCCGGCACCAGCATTCACATGTCAGCCCTAGACGGCATCATGAACGTCAATTCCATGTTCACTCTCGCCGTCTTCTTAGGCCTGACCTGGAACCCCAACGATCCGACGAACAACCTCATCCAAAGCCCTAATTGCTTGGCCGGCCCCTCCGTTGCCGAGAATCTCGTCGCCTTCCATGTCTATTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAATCGCCCTCGGCCTCAAGCAGGCCATTCGGATCTCCAAAAGCCCCTTCTATCACCCGACCGAGTTCTTCGTTCGCGTCAACAAAACCGCCGTCCGAATCGGGATGCTGGTTTCGGGAATCGGCTCGGTTTGCGGCTGCGGATTCCTTATGATAGCGCTTATCAATGTTGTGCAGATCAAGCTTGGTACTCTGAGCTGCGGCAGCTCTCAGACTTACGCGGCGGTGGTTCCGCTGGTGATTCTGGTTCCTTTTGCACTTCTGATTTACATCTGCCTTGTTTCTTACGCTTTTATCAATTAGAACATTGTGTGTTTCCTGAATATACGACGATTCTTGATTTCCATTTGACGTTGATCTGTGTTGCGTGTAGTATTTCGAATGAGTACCATGATCGGAGGAATTCTAATTCTACTGTTCCAGTATTGTTATCAATCTTCTCGTCGGACTGGGTTGAAATAATTTTGTTTGATTAGATTGAATCGACTCCAGATCTTGCGTTTTTTA

mRNA sequence

TTACTCACTTTACCAATCGCGTCCGTCCACTCCACTCCGCCCAGAATCCGCCCTTCCTCCGCCGTGTGCAAAATGCCGGCCGGCACCAGCATTCACATGTCAGCCCTAGACGGCATCATGAACGTCAATTCCATGTTCACTCTCGCCGTCTTCTTAGGCCTGACCTGGAACCCCAACGATCCGACGAACAACCTCATCCAAAGCCCTAATTGCTTGGCCGGCCCCTCCGTTGCCGAGAATCTCGTCGCCTTCCATGTCTATTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAATCGCCCTCGGCCTCAAGCAGGCCATTCGGATCTCCAAAAGCCCCTTCTATCACCCGACCGAGTTCTTCGTTCGCGTCAACAAAACCGCCGTCCGAATCGGGATGCTGGTTTCGGGAATCGGCTCGGTTTGCGGCTGCGGATTCCTTATGATAGCGCTTATCAATGTTGTGCAGATCAAGCTTGGTACTCTGAGCTGCGGCAGCTCTCAGACTTACGCGGCGGTGGTTCCGCTGGTGATTCTGGTTCCTTTTGCACTTCTGATTTACATCTGCCTTGTTTCTTACGCTTTTATCAATTAGAACATTGTGTGTTTCCTGAATATACGACGATTCTTGATTTCCATTTGACGTTGATCTGTGTTGCGTGTAGTATTTCGAATGAGTACCATGATCGGAGGAATTCTAATTCTACTGTTCCAGTATTGTTATCAATCTTCTCGTCGGACTGGGTTGAAATAATTTTGTTTGATTAGATTGAATCGACTCCAGATCTTGCGTTTTTTA

Coding sequence (CDS)

ATGCCGGCCGGCACCAGCATTCACATGTCAGCCCTAGACGGCATCATGAACGTCAATTCCATGTTCACTCTCGCCGTCTTCTTAGGCCTGACCTGGAACCCCAACGATCCGACGAACAACCTCATCCAAAGCCCTAATTGCTTGGCCGGCCCCTCCGTTGCCGAGAATCTCGTCGCCTTCCATGTCTATTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAATCGCCCTCGGCCTCAAGCAGGCCATTCGGATCTCCAAAAGCCCCTTCTATCACCCGACCGAGTTCTTCGTTCGCGTCAACAAAACCGCCGTCCGAATCGGGATGCTGGTTTCGGGAATCGGCTCGGTTTGCGGCTGCGGATTCCTTATGATAGCGCTTATCAATGTTGTGCAGATCAAGCTTGGTACTCTGAGCTGCGGCAGCTCTCAGACTTACGCGGCGGTGGTTCCGCTGGTGATTCTGGTTCCTTTTGCACTTCTGATTTACATCTGCCTTGTTTCTTACGCTTTTATCAATTAG

Protein sequence

MPAGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCGFLMIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN

Homology

[Close]

BLAST of Lcy09g001730 vs. ExPASy TrEMBL
Match: A0A6J1JSD7 (uncharacterized protein LOC111487406 OS=Cucurbita maxima OX=3661 GN=LOC111487406 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.2e-83
Identity = 161/172 (93.60%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MPAGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAF 60
           MP GT+IHMSALDGI+NVNSMFTLAVFLGL WNPNDPTNNL++SPNCLA P+VAENLVAF
Sbjct: 1   MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120

Query: 121 FLMIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN 173
           FLM+ALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFAL+IYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 172

[Close]

BLAST of Lcy09g001730 vs. ExPASy TrEMBL
Match: A0A6J1HD70 (uncharacterized protein LOC111463051 OS=Cucurbita moschata OX=3662 GN=LOC111463051 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.7e-83
Identity = 161/172 (93.60%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MPAGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAF 60
           MP GT+IHMSALDGI+NVNSMFTLAVFLGL WNPNDPTNNL++SPNCLA P+VAENLVAF
Sbjct: 1   MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLATPNVAENLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120

Query: 121 FLMIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN 173
           FLM+ALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFAL+IYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 172

[Close]

BLAST of Lcy09g001730 vs. ExPASy TrEMBL
Match: A0A6J1BXU9 (uncharacterized protein LOC111006700 OS=Momordica charantia OX=3673 GN=LOC111006700 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.4e-82
Identity = 158/172 (91.86%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MPAGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAF 60
           MPAGTSIH+SALDGI+NVNSMFTLAVFLGL WNPNDPTNNL+Q+PNCLA PS+AENLVAF
Sbjct: 54  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 113

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNK+A+RIGML+SGIGSVCGCG
Sbjct: 114 HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 173

Query: 121 FLMIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN 173
           FLM+ALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL+IYICLVSYAFIN
Sbjct: 174 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIIYICLVSYAFIN 225

[Close]

BLAST of Lcy09g001730 vs. ExPASy TrEMBL
Match: A0A0A0KA88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008850 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.7e-81
Identity = 157/172 (91.28%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MPAGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAF 60
           MP GTSIH+SALDGI+NVNSMFTLAVFLGL WNPNDP NNLIQSPNCLAGPSVA NLV+F
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVNKTA+RIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN 173
           FLM+ALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL++YICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAFIN 172

[Close]

BLAST of Lcy09g001730 vs. ExPASy TrEMBL
Match: A0A5D3DL39 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001250 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.0e-80
Identity = 157/172 (91.28%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MPAGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAF 60
           MP GTSIH+SALDGI+NVNSMFTLAVFLGL WNPNDP NNLIQSP+CLAGPSVA NLVAF
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPSCLAGPSVAANLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEF +RVNKTA+RIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFLIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN 173
           FLM+ALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL++YICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAFIN 172

[Close]

BLAST of Lcy09g001730 vs. NCBI nr
Match: XP_038885575.1 (uncharacterized protein LOC120075905 [Benincasa hispida])

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 163/172 (94.77%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MPAGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAF 60
           MPAGTSIH+SALDGI+NVNSMFTLAVFLGL WNPNDPTNNLIQSPNCLAGPSVA NLVAF
Sbjct: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLIQSPNCLAGPSVAANLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVR+GMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRVGMLVSGIGSVCGCG 120

Query: 121 FLMIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN 173
           FLM+ALINVVQIKLG LSCGSSQT+AAVVPLVILVPFAL+IYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGVLSCGSSQTFAAVVPLVILVPFALVIYICLVSYAFIN 172

[Close]

BLAST of Lcy09g001730 vs. NCBI nr
Match: XP_022990564.1 (uncharacterized protein LOC111487406 [Cucurbita maxima] >XP_023515774.1 uncharacterized protein LOC111779812 [Cucurbita pepo subsp. pepo] >KAG6602640.1 hypothetical protein SDJN03_07873, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033327.1 hypothetical protein SDJN02_07382, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.2 bits (814), Expect = 4.5e-83
Identity = 161/172 (93.60%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MPAGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAF 60
           MP GT+IHMSALDGI+NVNSMFTLAVFLGL WNPNDPTNNL++SPNCLA P+VAENLVAF
Sbjct: 1   MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120

Query: 121 FLMIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN 173
           FLM+ALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFAL+IYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 172

[Close]

BLAST of Lcy09g001730 vs. NCBI nr
Match: XP_022962637.1 (uncharacterized protein LOC111463051 [Cucurbita moschata])

HSP 1 Score: 317.4 bits (812), Expect = 7.6e-83
Identity = 161/172 (93.60%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MPAGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAF 60
           MP GT+IHMSALDGI+NVNSMFTLAVFLGL WNPNDPTNNL++SPNCLA P+VAENLVAF
Sbjct: 1   MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLATPNVAENLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120

Query: 121 FLMIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN 173
           FLM+ALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFAL+IYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 172

[Close]

BLAST of Lcy09g001730 vs. NCBI nr
Match: XP_022134461.1 (uncharacterized protein LOC111006700 [Momordica charantia])

HSP 1 Score: 314.7 bits (805), Expect = 5.0e-82
Identity = 158/172 (91.86%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MPAGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAF 60
           MPAGTSIH+SALDGI+NVNSMFTLAVFLGL WNPNDPTNNL+Q+PNCLA PS+AENLVAF
Sbjct: 54  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 113

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNK+A+RIGML+SGIGSVCGCG
Sbjct: 114 HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 173

Query: 121 FLMIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN 173
           FLM+ALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL+IYICLVSYAFIN
Sbjct: 174 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIIYICLVSYAFIN 225

[Close]

BLAST of Lcy09g001730 vs. NCBI nr
Match: XP_004138443.1 (uncharacterized protein LOC101208865 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 5.5e-81
Identity = 157/172 (91.28%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MPAGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAF 60
           MP GTSIH+SALDGI+NVNSMFTLAVFLGL WNPNDP NNLIQSPNCLAGPSVA NLV+F
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVNKTA+RIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAFIN 173
           FLM+ALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL++YICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAFIN 172

[Close]

BLAST of Lcy09g001730 vs. TAIR 10
Match: AT5G05950.1 (maternal effect embryo arrest 60 )

HSP 1 Score: 222.6 bits (566), Expect = 2.4e-58
Identity = 118/173 (68.21%), Postives = 142/173 (82.08%), Query Frame = 0


Query: 5   TSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAFHVYS 64
           TSIH++ALDGI+NVNS+FTLAVF+GL WNP DP N+L+  PNC+    +AENLVAFHVYS
Sbjct: 3   TSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVYS 62

Query: 65  FSSFLFSSLIALGLKQAIRISKSPFYH------PTEFFVRVNKTAVRIGMLVSGIGSVCG 124
           F+SFLFSSLIALGLKQA+R++ +  +H      P  ++  VNKTA+R GM+ SG+GSVCG
Sbjct: 63  FASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYY--VNKTALRFGMVTSGLGSVCG 122

Query: 125 CGFLMIALINVVQIKLGTLSCGSS-QTYAAVVPLVILVPFALLIYICLVSYAF 171
           CGFLM+ALINVVQIKLGTL CG+S  TYAAVVPLVILVP AL IY+ L+ YAF
Sbjct: 123 CGFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAF 173

[Close]

BLAST of Lcy09g001730 vs. TAIR 10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 142.5 bits (358), Expect = 3.1e-34
Identity = 93/185 (50.27%), Postives = 123/185 (66.49%), Query Frame = 0


Query: 5   TSIHMSALDGIMNVNSMFTLAVFLGLTWNPN--------DPTNNLIQSPNCLAGPSVAEN 64
           T IH++A+DGI+NVNS+F+LA+FLGLT + N           N+ ++      GP++AE 
Sbjct: 19  TLIHVTAIDGIVNVNSLFSLALFLGLTTSGNITFPVSSSASENHHLRRCISAKGPALAER 78

Query: 65  LVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYH---PTEFFV------RVNKTAVRIG 124
           LV+ HVYSFS FLFSSLIA+ LKQAIR + +         E  V      RVN  A+R+G
Sbjct: 79  LVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGRVNLAALRVG 138

Query: 125 MLVSGIGSVCGCGFLMIALINVVQIKLGTLSCGSS-QTYAAVVPLVILVPFALLIYICLV 172
           ++ S + SV GCGFL +AL+++VQIKLG L C  S    AA+VPLV+LVP AL+IY+ LV
Sbjct: 139 IVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLVVLVPSALIIYVFLV 198

[Close]

BLAST of Lcy09g001730 vs. TAIR 10
Match: AT3G07510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 139.8 bits (351), Expect = 2.0e-33
Identity = 84/168 (50.00%), Postives = 111/168 (66.07%), Query Frame = 0


Query: 3   AGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAFHV 62
           A TS+H+SALDG++NVNS+FT+AVF+GL+       ++L Q  +C A   VA+ L+ F V
Sbjct: 22  ATTSVHVSALDGLVNVNSLFTIAVFVGLSL-ATPGQHSLEQRSSCDASADVAKKLLVFEV 81

Query: 63  YSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCGFL 122
            SFS FLFSSL+A GLK A+ +  S   +   F   +N   +R GM+ S +GSV GC FL
Sbjct: 82  VSFSFFLFSSLVAQGLKLALNLLNSKDVNEI-FRAHINIKVLRWGMMASAVGSVMGCLFL 141

Query: 123 MIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAF 171
           M++++NV+QI+LG LSCGS     AV  LV LV  ALLIYI    YAF
Sbjct: 142 MLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 187

[Close]

BLAST of Lcy09g001730 vs. TAIR 10
Match: AT3G07510.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 139.8 bits (351), Expect = 2.0e-33
Identity = 84/168 (50.00%), Postives = 111/168 (66.07%), Query Frame = 0


Query: 3   AGTSIHMSALDGIMNVNSMFTLAVFLGLTWNPNDPTNNLIQSPNCLAGPSVAENLVAFHV 62
           A TS+H+SALDG++NVNS+FT+AVF+GL+       ++L Q  +C A   VA+ L+ F V
Sbjct: 22  ATTSVHVSALDGLVNVNSLFTIAVFVGLSL-ATPGQHSLEQRSSCDASADVAKKLLVFEV 81

Query: 63  YSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCGFL 122
            SFS FLFSSL+A GLK A+ +  S   +   F   +N   +R GM+ S +GSV GC FL
Sbjct: 82  VSFSFFLFSSLVAQGLKLALNLLNSKDVNEI-FRAHINIKVLRWGMMASAVGSVMGCLFL 141

Query: 123 MIALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAF 171
           M++++NV+QI+LG LSCGS     AV  LV LV  ALLIYI    YAF
Sbjct: 142 MLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 187

[Close]

BLAST of Lcy09g001730 vs. TAIR 10
Match: AT2G01580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28
Identity = 72/167 (43.11%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 5   TSIHMSALDGIMNVNSMFTLAVFLGLTWN-PNDPTNNLIQSPNCLAGPSVAENLVAFHVY 64
           TS+H++ALDGI++ NS+FT+AVF+G++++ P+D T  L     C AG  V  +LV F V 
Sbjct: 26  TSVHVTALDGIVSANSLFTVAVFVGISFDQPSDLT--LTDRTECSAGRDVERDLVVFEVI 85

Query: 65  SFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCGFLM 124
           SF+ FLFSSL+A G+K AI +  S       F   +N+  +R G++ +  GS+ GC FL+
Sbjct: 86  SFAFFLFSSLVAQGMKLAINLLNSKETDEV-FKANINRDVLRFGVVGAAGGSILGCVFLL 145

Query: 125 IALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALLIYICLVSYAF 171
           +++++V+Q++LG LSCG++     V+ LV+LV  AL +YI  V Y+F
Sbjct: 146 LSIVDVIQLRLGLLSCGNALAIHTVLVLVVLVSSALSVYIFTVFYSF 189

The following BLAST results are available for this feature:

BLAST of Lcy09g001730 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g001730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSD7	2.2e-83	93.60	uncharacterized protein LOC111487406 OS=Cucurbita maxima OX=3661 GN=LOC111487406...	[more]
A0A6J1HD70	3.7e-83	93.60	uncharacterized protein LOC111463051 OS=Cucurbita moschata OX=3662 GN=LOC1114630...	[more]
A0A6J1BXU9	2.4e-82	91.86	uncharacterized protein LOC111006700 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A0A0KA88	2.7e-81	91.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008850 PE=4 SV=1	[more]
A0A5D3DL39	1.0e-80	91.28	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lcy09g001730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885575.1	2.0e-83	94.77	uncharacterized protein LOC120075905 [Benincasa hispida]	[more]
XP_022990564.1	4.5e-83	93.60	uncharacterized protein LOC111487406 [Cucurbita maxima] >XP_023515774.1 uncharac...	[more]
XP_022962637.1	7.6e-83	93.60	uncharacterized protein LOC111463051 [Cucurbita moschata]	[more]
XP_022134461.1	5.0e-82	91.86	uncharacterized protein LOC111006700 [Momordica charantia]	[more]
XP_004138443.1	5.5e-81	91.28	uncharacterized protein LOC101208865 [Cucumis sativus]	[more]

BLAST of Lcy09g001730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05950.1	2.4e-58	68.21	maternal effect embryo arrest 60	[more]
AT3G46890.1	3.1e-34	50.27	BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TA...	[more]
AT3G07510.1	2.0e-33	50.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G07510.2	2.0e-33	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G01580.1	1.2e-28	43.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33430	MATERNAL EFFECT EMBRYO ARREST PROTEIN	coord: 3..171
None	No IPR available	PANTHER	PTHR33430:SF7	OS07G0240400 PROTEIN	coord: 3..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g001730.1	Lcy09g001730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008289	lipid binding