Lcy09g000760 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g000760
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	50S ribosomal protein-like protein
Location	Chr09: 704202 .. 705519 (-)
RNA-Seq Expression	Lcy09g000760
Synteny	Lcy09g000760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTAAAGAAAAAAAAAATTTATTCGTTGCTGCTGTCTTCTCTCTAACTCAAAGAGTAAAGAGACTCCAAAAGGATCCATTCGCATCACACTTCTCACTTCTCATCCCCAATTCAGATCTCTCCAATTTCTCTCCAGAAATTTCACTCCAAATTTTATTCAATTTTCAATTTCACACAACAGAAATTAAGCAACGAATCTCTCAAATCTCAATCTCAATCTCCCATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCGCCGGTAGCCCTACTCGAAGCCCCACCGCTAGCCCCGTCATTCACCTCCGCCGCCGCCGCCGCAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGACAACTCCGCCGATCCTCAAGATGTCGACGACGACGATGACGACGACAACATGATTCCAGAGAAGAACGATAAGGAGGTCCGAGCCAGGCGGAAACTCAAGGATTTGTTCGTTTCGTCGCCGCCGCTCGAGGATAACGTTTCCGATAGGCGAATCGAAGAACAGGAGGGATTGTTAACGGCGACTAACACCAGCGCCGCTGGAATCGGTACGACCTCCACCACTCGCCGGTCCCTGAGGCCGATTTCGGCGACATTCCGTTACAGATTTCTCCGGCGAGCTTGGCGGCCGGTGCTCGTCGCCATTCCCGAGTAGAAGATGCTCCTCTCTGGTAAAATCTGTACGAAGAAATTCCATATTTTTGCCTTAATTTTTTTTTTCTTTTTTGATTTTCATAACATTTTTTTTTCTAATAAATTCCGACGAGTCGTCTAGCGCTAGAGAAGAAGAGAGAGGTAAGCAATGTAAATATTAAAAAAAAATTATAAAAAATTATTAAAAAAAAAAGAAAATACTTATTAATAAATTATTATACGAATACGATAGATGTAAATTACAATTAAAAGTTTAAAACATGTTTATTATTATTGTAAAAAAAGTAATTAATTAAGTATTGGCGCCGTATTTTGATAAAGTGCGCCGTAGTTGCGTGAGGACGTAACGGCCACGCGACGTTGACAACTGAACTGACCAATCCGTTAACGAAAAATGAACGTTTTTTTTAACGATTAAAACTAAAGAAAACCGTTAGCGTTAAATATTAATTGAATTATAATGATGATTAATATGGAAAAAGCTTGTTTTGGGAGTGCGGTAAAAATTGTAATTTAGCAGTTAAAAATGCGTGTAATTATTATTGTTGGGGTGTAATTTTCGAATTTAATTTATGATTCCACGTGTGTTTGTTTAGAAGTGAGAATAGGCAGTG

mRNA sequence

ATATTAAAGAAAAAAAAAATTTATTCGTTGCTGCTGTCTTCTCTCTAACTCAAAGAGTAAAGAGACTCCAAAAGGATCCATTCGCATCACACTTCTCACTTCTCATCCCCAATTCAGATCTCTCCAATTTCTCTCCAGAAATTTCACTCCAAATTTTATTCAATTTTCAATTTCACACAACAGAAATTAAGCAACGAATCTCTCAAATCTCAATCTCAATCTCCCATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCGCCGGTAGCCCTACTCGAAGCCCCACCGCTAGCCCCGTCATTCACCTCCGCCGCCGCCGCCGCAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGACAACTCCGCCGATCCTCAAGATGTCGACGACGACGATGACGACGACAACATGATTCCAGAGAAGAACGATAAGGAGGTCCGAGCCAGGCGGAAACTCAAGGATTTGTTCGTTTCGTCGCCGCCGCTCGAGGATAACGTTTCCGATAGGCGAATCGAAGAACAGGAGGGATTGTTAACGGCGACTAACACCAGCGCCGCTGGAATCGGTACGACCTCCACCACTCGCCGGTCCCTGAGGCCGATTTCGGCGACATTCCGTTACAGATTTCTCCGGCGAGCTTGGCGGCCGGTGCTCGTCGCCATTCCCGAGTAGAAGATGCTCCTCTCTGGTAAAATCTGTACGAAGAAATTCCATATTTTTGCCTTAATTTTTTTTTTCTTTTTTGATTTTCATAACATTTTTTTTTCTAATAAATTCCGACGAGTCGTCTAGCGCTAGAGAAGAAGAGAGAGGTAAGCAATGTAAATATTAAAAAAAAATTATAAAAAATTATTAAAAAAAAAAGAAAATACTTATTAATAAATTATTATACGAATACGATAGATGTAAATTACAATTAAAAGTTTAAAACATGTTTATTATTATTGTAAAAAAAGTAATTAATTAAGTATTGGCGCCGTATTTTGATAAAGTGCGCCGTAGTTGCGTGAGGACGTAACGGCCACGCGACGTTGACAACTGAACTGACCAATCCGTTAACGAAAAATGAACGTTTTTTTTAACGATTAAAACTAAAGAAAACCGTTAGCGTTAAATATTAATTGAATTATAATGATGATTAATATGGAAAAAGCTTGTTTTGGGAGTGCGGTAAAAATTGTAATTTAGCAGTTAAAAATGCGTGTAATTATTATTGTTGGGGTGTAATTTTCGAATTTAATTTATGATTCCACGTGTGTTTGTTTAGAAGTGAGAATAGGCAGTG

Coding sequence (CDS)

ATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCGCCGGTAGCCCTACTCGAAGCCCCACCGCTAGCCCCGTCATTCACCTCCGCCGCCGCCGCCGCAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGACAACTCCGCCGATCCTCAAGATGTCGACGACGACGATGACGACGACAACATGATTCCAGAGAAGAACGATAAGGAGGTCCGAGCCAGGCGGAAACTCAAGGATTTGTTCGTTTCGTCGCCGCCGCTCGAGGATAACGTTTCCGATAGGCGAATCGAAGAACAGGAGGGATTGTTAACGGCGACTAACACCAGCGCCGCTGGAATCGGTACGACCTCCACCACTCGCCGGTCCCTGAGGCCGATTTCGGCGACATTCCGTTACAGATTTCTCCGGCGAGCTTGGCGGCCGGTGCTCGTCGCCATTCCCGAGTAG

Protein sequence

MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

Homology

[Close]

BLAST of Lcy09g000760 vs. ExPASy TrEMBL
Match: A0A6J1JSX9 (uncharacterized protein LOC111487551 OS=Cucurbita maxima OX=3661 GN=LOC111487551 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.6e-75
Identity = 153/159 (96.23%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SAD
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDASAD 60

Query: 61  PQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSDRRIEEQEGLLTATNTS 120
           PQDVDDDDDD+NMIPEKNDKEVRARRKLKDLFVSSPPLED VSDRRIEEQEGLLTA NTS
Sbjct: 61  PQDVDDDDDDENMIPEKNDKEVRARRKLKDLFVSSPPLEDTVSDRRIEEQEGLLTAINTS 120

Query: 121 AAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160
           AAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of Lcy09g000760 vs. ExPASy TrEMBL
Match: A0A6J1H7N8 (uncharacterized protein LOC111460905 OS=Cucurbita moschata OX=3662 GN=LOC111460905 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.9e-74
Identity = 151/159 (94.97%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SAD
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDTSAD 60

Query: 61  PQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSDRRIEEQEGLLTATNTS 120
           PQDVDDDDDD+NMIPEKNDKEV+ARRKLKDLFVSSPPLED VSDRRIEEQEGLLTA N S
Sbjct: 61  PQDVDDDDDDENMIPEKNDKEVQARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAINAS 120

Query: 121 AAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160
           AAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of Lcy09g000760 vs. ExPASy TrEMBL
Match: A0A6J1BYN1 (uncharacterized protein LOC111006461 OS=Momordica charantia OX=3673 GN=LOC111006461 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.3e-71
Identity = 148/159 (93.08%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQC VAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD
Sbjct: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  PQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSDRRIEEQEGLLTATNTS 120
           PQDVDD++DD+NMIPEKN+KEVRARRKLKDLFVSSPP +D VSDRRIEEQEGLLTA+NTS
Sbjct: 61  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS 120

Query: 121 AAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160
           AAGIG TSTTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIG-TSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 158

[Close]

BLAST of Lcy09g000760 vs. ExPASy TrEMBL
Match: A0A6J1JYC4 (uncharacterized protein LOC111489414 OS=Cucurbita maxima OX=3661 GN=LOC111489414 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.3e-71
Identity = 149/160 (93.12%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQCAVAG PT+SPTASPV HLRRRRRKTLRMLLNRTDRRRFPYQDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  PQDV-DDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSDRRIEEQEGLLTATNT 120
           PQDV DDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED VSDRRIEEQE LLT  NT
Sbjct: 61  PQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEALLTTANT 120

Query: 121 SAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160
           SAAGIGT S TRRSLRPISATFRYRFLRRAWRPVLV IPE
Sbjct: 121 SAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of Lcy09g000760 vs. ExPASy TrEMBL
Match: A0A6J1FG66 (uncharacterized protein LOC111445119 OS=Cucurbita moschata OX=3662 GN=LOC111445119 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.7e-71
Identity = 148/160 (92.50%), Postives = 149/160 (93.12%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQCAVAG PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSAD 60

Query: 61  PQDV-DDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSDRRIEEQEGLLTATNT 120
           PQDV DDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED VSDRRIEEQE LLT  NT
Sbjct: 61  PQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEALLTTANT 120

Query: 121 SAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160
           SAAGIGT S TRRSLRPISATFRYRFLRRAWRPVLV IPE
Sbjct: 121 SAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of Lcy09g000760 vs. NCBI nr
Match: XP_022990769.1 (uncharacterized protein LOC111487551 [Cucurbita maxima])

HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 153/159 (96.23%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SAD
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDASAD 60

Query: 61  PQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSDRRIEEQEGLLTATNTS 120
           PQDVDDDDDD+NMIPEKNDKEVRARRKLKDLFVSSPPLED VSDRRIEEQEGLLTA NTS
Sbjct: 61  PQDVDDDDDDENMIPEKNDKEVRARRKLKDLFVSSPPLEDTVSDRRIEEQEGLLTAINTS 120

Query: 121 AAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160
           AAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of Lcy09g000760 vs. NCBI nr
Match: XP_023546418.1 (uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.5 bits (737), Expect = 3.5e-74
Identity = 152/159 (95.60%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SAD
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDTSAD 60

Query: 61  PQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSDRRIEEQEGLLTATNTS 120
           PQDVDDDDDD+NMIPEKNDKEVRARRKLKDLFVSSPPLED VSDRRIEEQEGLLTA N S
Sbjct: 61  PQDVDDDDDDENMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAINAS 120

Query: 121 AAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160
           AAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of Lcy09g000760 vs. NCBI nr
Match: XP_022960038.1 (uncharacterized protein LOC111460905 [Cucurbita moschata])

HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 151/159 (94.97%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SAD
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDTSAD 60

Query: 61  PQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSDRRIEEQEGLLTATNTS 120
           PQDVDDDDDD+NMIPEKNDKEV+ARRKLKDLFVSSPPLED VSDRRIEEQEGLLTA N S
Sbjct: 61  PQDVDDDDDDENMIPEKNDKEVQARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAINAS 120

Query: 121 AAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160
           AAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of Lcy09g000760 vs. NCBI nr
Match: KAG6602699.1 (hypothetical protein SDJN03_07932, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 286.6 bits (732), Expect = 1.3e-73
Identity = 151/159 (94.97%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SAD
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDTSAD 60

Query: 61  PQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSDRRIEEQEGLLTATNTS 120
           PQDVDDDDDD+NMIPEKNDKEVRARRKLKDLFVSSPPLED VSD RIEEQEGLLTA N S
Sbjct: 61  PQDVDDDDDDENMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDNRIEEQEGLLTAINAS 120

Query: 121 AAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160
           AAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of Lcy09g000760 vs. NCBI nr
Match: XP_022134107.1 (uncharacterized protein LOC111006461 [Momordica charantia])

HSP 1 Score: 278.9 bits (712), Expect = 2.8e-71
Identity = 148/159 (93.08%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQC VAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD
Sbjct: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  PQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSDRRIEEQEGLLTATNTS 120
           PQDVDD++DD+NMIPEKN+KEVRARRKLKDLFVSSPP +D VSDRRIEEQEGLLTA+NTS
Sbjct: 61  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS 120

Query: 121 AAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160
           AAGIG TSTTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIG-TSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 158

[Close]

BLAST of Lcy09g000760 vs. TAIR 10
Match: AT1G66890.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36 Blast hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.4 bits (233), Expect = 9.1e-20
Identity = 76/174 (43.68%), Postives = 96/174 (55.17%), Query Frame = 0


Query: 3   TLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSADP 62
           +L KFKLLA+ C+       SPT SPVIHL  RRRKTLR+LL R +DR R P   N+ D 
Sbjct: 2   SLQKFKLLATHCSTV---AESPTRSPVIHL--RRRKTLRLLLTRSSDRWRLPEIQNNVDE 61

Query: 63  QDVDDDDDDDNMIPEKNDK--EVRARRKLKDLFVSSPPLE--------DNVSDRRIEEQE 122
                         +K DK  ++R+ RKL DLFVSSPP E        D  +   +E + 
Sbjct: 62  S-------------KKTDKRGKIRSSRKLGDLFVSSPPFEESGGGGGGDKGTKMEVEMER 121

Query: 123 GLLTATNTSAAGIGTTSTTRR-----SLRPISA-TFRYRFLRRAWRPVLVAIPE 160
            +     ++ AG G   T RR     S+RP+S+ T R R LRR+WRPVLV IPE
Sbjct: 122 DVPVNGVSNNAGFGEEITARRVGFNGSVRPMSSVTLRCRLLRRSWRPVLVTIPE 157

[Close]

BLAST of Lcy09g000760 vs. TAIR 10
Match: AT5G16200.1 (50S ribosomal protein-related )

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-15
Identity = 68/168 (40.48%), Postives = 91/168 (54.17%), Query Frame = 0


Query: 1   MATLHKFKLLAS----QCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRT--DRRRFPY 60
           ++ LHKFKL A+    + + AGSPT SPT SPV +L  RRRKTLRML +++   RRR   
Sbjct: 3   LSRLHKFKLFAAHRSLEASTAGSPTMSPTKSPVFNL--RRRKTLRMLFDKSSDSRRRNLR 62

Query: 61  QDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVS--SPPLEDNVSDRRIEEQEG 120
           Q     P      + D N   +K       RRKL++L V+  SPP +       I E+  
Sbjct: 63  QILEESP------ESDGNSGNKKRGNHRATRRKLRELLVTSPSPPYKGREDIDGIGEERS 122

Query: 121 LLTATNTSAAGIGTTSTTRRSLRPISA-TFRYRFLRRAWRPVLVAIPE 160
            ++  N ++ G G   T RR     S  +FR R LR+ WRPVLV+IPE
Sbjct: 123 EISPLNVTSNGDGRELTARRFGSSGSVQSFRLRILRKPWRPVLVSIPE 162

[Close]

BLAST of Lcy09g000760 vs. TAIR 10
Match: AT1G68430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66890.1); Has 35 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-09
Identity = 58/165 (35.15%), Postives = 78/165 (47.27%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAG-SPTRSPT--ASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDN 60
           MATL +FK L +QC VA  SPTRSP+   SP++ L RR++ TL+MLL+     R   Q  
Sbjct: 1   MATLQRFKFLGTQCGVAAQSPTRSPSPRTSPLVQL-RRKKTTLKMLLSLASPSRREQQP- 60

Query: 61  SADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSD---RRIEEQEGLL 120
                           +   + K+V A RKLKDLFVSS   E+   +    + + +E +L
Sbjct: 61  ----------------LIHHHHKDV-AGRKLKDLFVSSSSAEEEQEEDERPKGKTKEEVL 120

Query: 121 TATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160
            A                   P+   F  R L+RAWRP L  I E
Sbjct: 121 AAMAAKLNAASRLQCESADAAPVWFGFSKRLLQRAWRPKLGTIHE 146

The following BLAST results are available for this feature:

BLAST of Lcy09g000760 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g000760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSX9	7.6e-75	96.23	uncharacterized protein LOC111487551 OS=Cucurbita maxima OX=3661 GN=LOC111487551...	[more]
A0A6J1H7N8	4.9e-74	94.97	uncharacterized protein LOC111460905 OS=Cucurbita moschata OX=3662 GN=LOC1114609...	[more]
A0A6J1BYN1	1.3e-71	93.08	uncharacterized protein LOC111006461 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1JYC4	2.3e-71	93.13	uncharacterized protein LOC111489414 OS=Cucurbita maxima OX=3661 GN=LOC111489414...	[more]
A0A6J1FG66	8.7e-71	92.50	uncharacterized protein LOC111445119 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]

BLAST of Lcy09g000760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990769.1	1.6e-74	96.23	uncharacterized protein LOC111487551 [Cucurbita maxima]	[more]
XP_023546418.1	3.5e-74	95.60	uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo]	[more]
XP_022960038.1	1.0e-73	94.97	uncharacterized protein LOC111460905 [Cucurbita moschata]	[more]
KAG6602699.1	1.3e-73	94.97	hypothetical protein SDJN03_07932, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022134107.1	2.8e-71	93.08	uncharacterized protein LOC111006461 [Momordica charantia]	[more]

BLAST of Lcy09g000760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66890.1	9.1e-20	43.68	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G16200.1	1.4e-15	40.48	50S ribosomal protein-related	[more]
AT1G68430.1	3.2e-09	35.15	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..80
None	No IPR available	PANTHER	PTHR34542:SF6	50S RIBOSOMAL-LIKE PROTEIN	coord: 1..159
None	No IPR available	PANTHER	PTHR34542	OS08G0359900 PROTEIN	coord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g000760.1	Lcy09g000760.1	mRNA