Lcy09g000730 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g000730
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc finger protein 6-like
Location	Chr09: 686161 .. 686652 (-)
RNA-Seq Expression	Lcy09g000730
Synteny	Lcy09g000730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAACTCTCAGCTGAAGCTCTTTGGTTTCAACATCTCAGAAGAGAATAAACCAGTTTCAAATTTTACAGAGCCGCCGCCGGCGGAGTGGCCGGAATCGGAAAATCCCCATGGCCCAAAGTTCGAGTGCCAATACTGTTGCAGAGAATTTTCAAATTCGCAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAGAGACAGCTCTTGAAGAGAACTCAAATGAAATCTTGCCATCGTAATTATTTCACTGCTCTGCACGTGCAGAACTGGCTGTCGTCGTCCTTTGCGCCGCCTCCGACGGTGGCGGGTCCTCCTCCACGGACGGCGGCGGGGGTTTACGCTATGACACGGCCGCCGTTGTCCCAAGAGGCTCGGCAGCAGGGCGGAGTTTTTACAGGGACGGTCGGAGTTGTAGGAGATGATGCAGTTGCCGGTCGGAGTTTGGGGGTGGATCTACGGCTTAGTCTTGGGCCTGGTAAGCCTTGA

mRNA sequence

ATGGCTAACTCTCAGCTGAAGCTCTTTGGTTTCAACATCTCAGAAGAGAATAAACCAGTTTCAAATTTTACAGAGCCGCCGCCGGCGGAGTGGCCGGAATCGGAAAATCCCCATGGCCCAAAGTTCGAGTGCCAATACTGTTGCAGAGAATTTTCAAATTCGCAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAGAGACAGCTCTTGAAGAGAACTCAAATGAAATCTTGCCATCGTAATTATTTCACTGCTCTGCACGTGCAGAACTGGCTGTCGTCGTCCTTTGCGCCGCCTCCGACGGTGGCGGGTCCTCCTCCACGGACGGCGGCGGGGGTTTACGCTATGACACGGCCGCCGTTGTCCCAAGAGGCTCGGCAGCAGGGCGGAGTTTTTACAGGGACGGTCGGAGTTGTAGGAGATGATGCAGTTGCCGGTCGGAGTTTGGGGGTGGATCTACGGCTTAGTCTTGGGCCTGGTAAGCCTTGA

Coding sequence (CDS)

ATGGCTAACTCTCAGCTGAAGCTCTTTGGTTTCAACATCTCAGAAGAGAATAAACCAGTTTCAAATTTTACAGAGCCGCCGCCGGCGGAGTGGCCGGAATCGGAAAATCCCCATGGCCCAAAGTTCGAGTGCCAATACTGTTGCAGAGAATTTTCAAATTCGCAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAGAGACAGCTCTTGAAGAGAACTCAAATGAAATCTTGCCATCGTAATTATTTCACTGCTCTGCACGTGCAGAACTGGCTGTCGTCGTCCTTTGCGCCGCCTCCGACGGTGGCGGGTCCTCCTCCACGGACGGCGGCGGGGGTTTACGCTATGACACGGCCGCCGTTGTCCCAAGAGGCTCGGCAGCAGGGCGGAGTTTTTACAGGGACGGTCGGAGTTGTAGGAGATGATGCAGTTGCCGGTCGGAGTTTGGGGGTGGATCTACGGCTTAGTCTTGGGCCTGGTAAGCCTTGA

Protein sequence

MANSQLKLFGFNISEENKPVSNFTEPPPAEWPESENPHGPKFECQYCCREFSNSQALGGHQNAHREERQLLKRTQMKSCHRNYFTALHVQNWLSSSFAPPPTVAGPPPRTAAGVYAMTRPPLSQEARQQGGVFTGTVGVVGDDAVAGRSLGVDLRLSLGPGKP

Homology

[Close]

BLAST of Lcy09g000730 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.2e-17
Identity = 56/113 (49.56%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 4   SQLKLFGFNISEENKPVSNFTEPPPAEWPESENPHGPKFECQYCCREFSNSQALGGHQNA 63
           S LKLFG N+ E     +  +EP P     SE+    K+ECQYCCREF+NSQALGGHQNA
Sbjct: 6   SSLKLFGINLLETTSVQNQSSEPRPGSGSGSES---RKYECQYCCREFANSQALGGHQNA 65

Query: 64  HREERQLLKRTQMKSC-----HRNYFTALHVQNWLSSSFAPPPTVAG---PPP 109
           H++ERQLLKR QM +      H N+       N L S+FAP P +     PPP
Sbjct: 66  HKKERQLLKRAQMLATRGLPRHHNFHPH---TNPLLSAFAPLPHLLSQPHPPP 112

[Close]

BLAST of Lcy09g000730 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.3e-13
Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 41  KFECQYCCREFSNSQALGGHQNAHREERQLLKRTQMKSCHR---NYFTA----LHVQNWL 100
           K+ECQYCCREF NSQALGGHQNAH++ERQ LKR Q+++      N+  A      ++N +
Sbjct: 72  KYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRNPI 131

Query: 101 SSSFAPPP 102
            S+FAPPP
Sbjct: 132 VSAFAPPP 139

[Close]

BLAST of Lcy09g000730 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07
Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 2   ANSQLKLFGFN-ISEENKPVSNFTEPPPAEWPESENPHGPKFECQYCCREFSNSQALGGH 61
           ++  +KLFGF  IS    P     E   +    +      + ECQYC +EF+NSQALGGH
Sbjct: 19  SDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGH 78

Query: 62  QNAHREERQLLKRTQMKSCHRN--YFTALHVQ 91
           QNAH++ER   KR Q+++   +  Y+   H Q
Sbjct: 79  QNAHKKERLKKKRLQLQARRASIGYYLTNHQQ 110

[Close]

BLAST of Lcy09g000730 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-07
Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 33  ESENPHGPKFECQYCCREFSNSQALGGHQNAHREERQLLKRTQMKSC--HRNYFTALHVQ 92
           + +N +  +FEC YC R F  SQALGGHQNAH+ ERQ  KR  M S   H       H+ 
Sbjct: 86  DKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIY 145

Query: 93  NWLSS 96
            +L++
Sbjct: 146 GFLNN 150

[Close]

BLAST of Lcy09g000730 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-07
Identity = 36/90 (40.00%), Postives = 46/90 (51.11%), Query Frame = 0


Query: 38  HGPKFECQYCCREFSNSQALGGHQNAHREERQLLKR---TQMKSCHRNYFTALHVQNWLS 97
           H  +FEC YC R F  SQALGGHQNAH+ ERQL KR   +       N ++  H  +W +
Sbjct: 87  HNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSSYFYHPDNNPYSYRHYPSWTN 146

Query: 98  SSFAPPPTV----AGPPPRTAAGVYAMTRP 121
                  +     +GP P   +G Y  TRP
Sbjct: 147 GPLTAARSYGGFSSGPKP---SGYY--TRP 171

[Close]

BLAST of Lcy09g000730 vs. ExPASy TrEMBL
Match: A0A6J1FG99 (zinc finger protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111445220 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 122/164 (74.39%), Postives = 137/164 (83.54%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEENKPVSNFTEPPPAEWPESENPHGPKFECQYCCREFSNSQALGGH 60
           MANSQLKLFGFNISE++K VSNFTEPPPAE PES  PH PKFECQYCCR FSNSQALGGH
Sbjct: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60

Query: 61  QNAHREERQLLKRTQMKSCHRNYFTALHVQNWLSSSFAP-PPTVAGPPPRTAAGVYAMTR 120
           QNAHREER+LLKR Q+KSCH NYFT LH+ NWLSSSFAP PP++    P  AAG++AM+R
Sbjct: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHLHNWLSSSFAPQPPSI----PPQAAGLHAMSR 120

Query: 121 PPLSQEARQQGGVFTGTVGVVGDDAVAGRSLGVDLRLSLGPGKP 164
           P LSQ+  +Q GV TG VG VGD+AV GR LG+DL+LSLGP KP
Sbjct: 121 PLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160

[Close]

BLAST of Lcy09g000730 vs. ExPASy TrEMBL
Match: A0A6J1JW51 (zinc finger protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111489415 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.9e-60
Identity = 121/163 (74.23%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEENKPVSNFTEPPPAEWPESENPHGPKFECQYCCREFSNSQALGGH 60
           MANSQLKLFGFNISE +  VSNFTEPPPAE PES  PH PKFECQYCCR FSNSQALGGH
Sbjct: 1   MANSQLKLFGFNISEHHNSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60

Query: 61  QNAHREERQLLKRTQMKSCHRNYFTALHVQNWLSSSFAPPPTVAGPPPRTAAGVYAMTRP 120
           QNAHREER+LLKR Q+KSCH NYFT LHV+NWLSSSF P P      P  AAG++AM+RP
Sbjct: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVRNWLSSSFVPQPP---STPLQAAGLHAMSRP 120

Query: 121 PLSQEARQQGGVFTGTVGVVGDDAVAGRSLGVDLRLSLGPGKP 164
           PLSQ+  +Q GV TG VG VGD+AV GR LG+DL+LSLGP KP
Sbjct: 121 PLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160

[Close]

BLAST of Lcy09g000730 vs. ExPASy TrEMBL
Match: A0A0A0LQ31 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404810 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 5.7e-25
Identity = 62/85 (72.94%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEENKPVSNFTEPP-PAEWPESENPHGPKFECQYCCREFSNSQALGG 60
           ++NS LKLFGF+IS+ENK VSNF EPP   E PESEN   PKFEC+YCCR+FSNSQALGG
Sbjct: 34  VSNSHLKLFGFSISKENKRVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGG 93

Query: 61  HQNAHREERQLLKRTQMKSCHRNYF 85
           HQNAH+EERQLLK  Q+K   RNYF
Sbjct: 94  HQNAHKEERQLLKTPQIKYFRRNYF 118

[Close]

BLAST of Lcy09g000730 vs. ExPASy TrEMBL
Match: A0A4S4DGM3 (C2H2-type domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_009917 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-19
Identity = 75/165 (45.45%), Postives = 97/165 (58.79%), Query Frame = 0


Query: 2   ANSQLKLFGFNISEENKPVSNFTEPPPAEWPES---ENPHGPKFECQYCCREFSNSQALG 61
           +NS+LKLFGF++SE+ +  S  T   P+  PES       G K+ECQYCCREF+NSQALG
Sbjct: 24  SNSRLKLFGFHVSEDEEVDSTKT---PSGSPESGCFPAAEGRKYECQYCCREFANSQALG 83

Query: 62  GHQNAHREERQLLKRTQMKSCHRNYFTALHVQNWLSSSFAPPPTVAGPP-----PRTAAG 121
           GHQNAH++ERQ LKR QM++ HRN   +  ++N + S+FAPP  +   P     P TAAG
Sbjct: 84  GHQNAHKKERQQLKRAQMQAHHRNAAVSF-MRNPMVSAFAPPHHLLPSPGQVVLPATAAG 143

Query: 122 -----VYA-MTRPPLSQEARQQGGVFTGTVGVVGDDAVAGRSLGV 153
                VY     PP        G VF+ T G V    + GR  G+
Sbjct: 144 QSPSWVYVPRAAPPFHV---SHGCVFSSTAGAV----LGGRDAGM 177

[Close]

BLAST of Lcy09g000730 vs. ExPASy TrEMBL
Match: A0A6A1VGC0 (Zinc finger protein 6 OS=Morella rubra OX=262757 GN=CJ030_MR6G021594 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.7e-19
Identity = 75/198 (37.88%), Postives = 97/198 (48.99%), Query Frame = 0


Query: 6   LKLFGFNI---SEENKPVSNFTEPPPAEWPESENPHGPKFECQYCCREFSNSQALGGHQN 65
           LKLFGFNI   SEEN   ++ +     E    ++  G K+ECQYCCREF+NSQALGGHQN
Sbjct: 20  LKLFGFNIGNVSEENDSDASKSPSGSQESETIQSSDGRKYECQYCCREFANSQALGGHQN 79

Query: 66  AHREERQLLKRTQMKSCHRNYFTALHV-QNWLSSSFAPPPTVAGP--PPRT--------- 125
           AH++ERQLLKR QM++       A H+ QN + S+F PP  +  P  PP++         
Sbjct: 80  AHKKERQLLKRAQMQASRNQLAAASHLRQNTMMSAFTPPAHLFAPAAPPQSSWFLVSHAG 139

Query: 126 --------------------------AAGVYAMTRPPLSQEARQQGGVFTGTVGVVGDDA 161
                                     A GV        S     + GV  G  G  GD  
Sbjct: 140 AATPFSLPNGGAYPSGAASVPGRRVYAGGVGESMMAVFSHGVGNRAGVVPGLTGFTGDGE 199

[Close]

BLAST of Lcy09g000730 vs. NCBI nr
Match: XP_038886238.1 (zinc finger protein 6-like [Benincasa hispida])

HSP 1 Score: 255.8 bits (652), Expect = 2.6e-64
Identity = 128/166 (77.11%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEENKPVSNFTEPPPA-EWPESENPHGPKFECQYCCREFSNSQALGG 60
           M  S+LKLFGFNIS+E K VSN T+PPPA EWPESENPH PKFECQYCCREFSNSQALGG
Sbjct: 1   MPKSRLKLFGFNISKEKKTVSNVTKPPPAMEWPESENPHAPKFECQYCCREFSNSQALGG 60

Query: 61  HQNAHREERQLLKRTQMKSCHRNYFTALHVQNWLSSSFAPP--PTVAGPPPRTAAGVYAM 120
           HQNAHREERQLLK  QMKSCHRNY TALHVQNWLSSSF PP  P V G PP TA  +YAM
Sbjct: 61  HQNAHREERQLLKSAQMKSCHRNYITALHVQNWLSSSFPPPPLPAVVGGPPSTAEMIYAM 120

Query: 121 TRPPLSQEARQQGGVFTGTVGVVGDDAVAGRSLGVDLRLSLGPGKP 164
           +RP LSQE R+Q G  TG +GVVGD+ V+G SLG+DL+LSLGPGKP
Sbjct: 121 SRPLLSQEVRRQAGDLTGVIGVVGDEDVSGWSLGLDLQLSLGPGKP 166

[Close]

BLAST of Lcy09g000730 vs. NCBI nr
Match: XP_022939247.1 (zinc finger protein 6-like [Cucurbita moschata])

HSP 1 Score: 242.7 bits (618), Expect = 2.3e-60
Identity = 122/164 (74.39%), Postives = 137/164 (83.54%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEENKPVSNFTEPPPAEWPESENPHGPKFECQYCCREFSNSQALGGH 60
           MANSQLKLFGFNISE++K VSNFTEPPPAE PES  PH PKFECQYCCR FSNSQALGGH
Sbjct: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60

Query: 61  QNAHREERQLLKRTQMKSCHRNYFTALHVQNWLSSSFAP-PPTVAGPPPRTAAGVYAMTR 120
           QNAHREER+LLKR Q+KSCH NYFT LH+ NWLSSSFAP PP++    P  AAG++AM+R
Sbjct: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHLHNWLSSSFAPQPPSI----PPQAAGLHAMSR 120

Query: 121 PPLSQEARQQGGVFTGTVGVVGDDAVAGRSLGVDLRLSLGPGKP 164
           P LSQ+  +Q GV TG VG VGD+AV GR LG+DL+LSLGP KP
Sbjct: 121 PLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160

[Close]

BLAST of Lcy09g000730 vs. NCBI nr
Match: KAG6578343.1 (Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 242.3 bits (617), Expect = 3.0e-60
Identity = 122/163 (74.85%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEENKPVSNFTEPPPAEWPESENPHGPKFECQYCCREFSNSQALGGH 60
           MANSQLKLFGFNISE++K VSNFTEPPPAE PES  PH PKFECQYCCR FSNSQALGGH
Sbjct: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60

Query: 61  QNAHREERQLLKRTQMKSCHRNYFTALHVQNWLSSSFAPPPTVAGPPPRTAAGVYAMTRP 120
           QNAHREER+LLKR Q+KSCH NYFT LHVQNWLSSSF P P      P  AAG++AM+RP
Sbjct: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPKPP---STPLQAAGLHAMSRP 120

Query: 121 PLSQEARQQGGVFTGTVGVVGDDAVAGRSLGVDLRLSLGPGKP 164
            LSQ+  +Q GV TG VG VGD+AV GR LG+DL+LSLGP KP
Sbjct: 121 LLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160

[Close]

BLAST of Lcy09g000730 vs. NCBI nr
Match: XP_023550962.1 (zinc finger protein 6-like [Cucurbita pepo subsp. pepo] >KAG7015922.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242.3 bits (617), Expect = 3.0e-60
Identity = 122/163 (74.85%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEENKPVSNFTEPPPAEWPESENPHGPKFECQYCCREFSNSQALGGH 60
           MANSQLKLFGFNISE++K VSNFTEPPPAE PES  PH PKFECQYCCR FSNSQALGGH
Sbjct: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60

Query: 61  QNAHREERQLLKRTQMKSCHRNYFTALHVQNWLSSSFAPPPTVAGPPPRTAAGVYAMTRP 120
           QNAHREER+LLKR Q+KSCH NYFT LHVQNWLSSSF P P      P  AAG++AM+RP
Sbjct: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPP---STPLQAAGLHAMSRP 120

Query: 121 PLSQEARQQGGVFTGTVGVVGDDAVAGRSLGVDLRLSLGPGKP 164
            LSQ+  +Q GV TG VG VGD+AV GR LG+DL+LSLGP KP
Sbjct: 121 LLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160

[Close]

BLAST of Lcy09g000730 vs. NCBI nr
Match: XP_022993371.1 (zinc finger protein 6-like [Cucurbita maxima])

HSP 1 Score: 241.9 bits (616), Expect = 3.9e-60
Identity = 121/163 (74.23%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEENKPVSNFTEPPPAEWPESENPHGPKFECQYCCREFSNSQALGGH 60
           MANSQLKLFGFNISE +  VSNFTEPPPAE PES  PH PKFECQYCCR FSNSQALGGH
Sbjct: 1   MANSQLKLFGFNISEHHNSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60

Query: 61  QNAHREERQLLKRTQMKSCHRNYFTALHVQNWLSSSFAPPPTVAGPPPRTAAGVYAMTRP 120
           QNAHREER+LLKR Q+KSCH NYFT LHV+NWLSSSF P P      P  AAG++AM+RP
Sbjct: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVRNWLSSSFVPQPP---STPLQAAGLHAMSRP 120

Query: 121 PLSQEARQQGGVFTGTVGVVGDDAVAGRSLGVDLRLSLGPGKP 164
           PLSQ+  +Q GV TG VG VGD+AV GR LG+DL+LSLGP KP
Sbjct: 121 PLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160

[Close]

BLAST of Lcy09g000730 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 89.4 bits (220), Expect = 3.0e-18
Identity = 56/113 (49.56%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 4   SQLKLFGFNISEENKPVSNFTEPPPAEWPESENPHGPKFECQYCCREFSNSQALGGHQNA 63
           S LKLFG N+ E     +  +EP P     SE+    K+ECQYCCREF+NSQALGGHQNA
Sbjct: 6   SSLKLFGINLLETTSVQNQSSEPRPGSGSGSES---RKYECQYCCREFANSQALGGHQNA 65

Query: 64  HREERQLLKRTQMKSC-----HRNYFTALHVQNWLSSSFAPPPTVAG---PPP 109
           H++ERQLLKR QM +      H N+       N L S+FAP P +     PPP
Sbjct: 66  HKKERQLLKRAQMLATRGLPRHHNFHPH---TNPLLSAFAPLPHLLSQPHPPP 112

[Close]

BLAST of Lcy09g000730 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 4.5e-14
Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 41  KFECQYCCREFSNSQALGGHQNAHREERQLLKRTQMKSCHR---NYFTA----LHVQNWL 100
           K+ECQYCCREF NSQALGGHQNAH++ERQ LKR Q+++      N+  A      ++N +
Sbjct: 72  KYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRNPI 131

Query: 101 SSSFAPPP 102
            S+FAPPP
Sbjct: 132 VSAFAPPP 139

[Close]

BLAST of Lcy09g000730 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 58.2 bits (139), Expect = 7.4e-09
Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 2   ANSQLKLFGFN-ISEENKPVSNFTEPPPAEWPESENPHGPKFECQYCCREFSNSQALGGH 61
           ++  +KLFGF  IS    P     E   +    +      + ECQYC +EF+NSQALGGH
Sbjct: 19  SDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGH 78

Query: 62  QNAHREERQLLKRTQMKSCHRN--YFTALHVQ 91
           QNAH++ER   KR Q+++   +  Y+   H Q
Sbjct: 79  QNAHKKERLKKKRLQLQARRASIGYYLTNHQQ 110

[Close]

BLAST of Lcy09g000730 vs. TAIR 10
Match: AT2G41940.1 (zinc finger protein 8 )

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-08
Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 33  ESENPHGPKFECQYCCREFSNSQALGGHQNAHREERQLLKRTQMKSC--HRNYFTALHVQ 92
           + +N +  +FEC YC R F  SQALGGHQNAH+ ERQ  KR  M S   H       H+ 
Sbjct: 86  DKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIY 145

Query: 93  NWLSS 96
            +L++
Sbjct: 146 GFLNN 150

[Close]

BLAST of Lcy09g000730 vs. TAIR 10
Match: AT3G58070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 3.7e-08
Identity = 36/90 (40.00%), Postives = 46/90 (51.11%), Query Frame = 0


Query: 38  HGPKFECQYCCREFSNSQALGGHQNAHREERQLLKR---TQMKSCHRNYFTALHVQNWLS 97
           H  +FEC YC R F  SQALGGHQNAH+ ERQL KR   +       N ++  H  +W +
Sbjct: 87  HNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSSYFYHPDNNPYSYRHYPSWTN 146

Query: 98  SSFAPPPTV----AGPPPRTAAGVYAMTRP 121
                  +     +GP P   +G Y  TRP
Sbjct: 147 GPLTAARSYGGFSSGPKP---SGYY--TRP 171

The following BLAST results are available for this feature:

BLAST of Lcy09g000730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39265	4.2e-17	49.56	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q9C9H1	6.3e-13	55.88	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39264	1.0e-07	39.13	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
P93751	2.3e-07	44.62	Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1	[more]
Q84WI0	5.2e-07	40.00	Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1	[more]

BLAST of Lcy09g000730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FG99	1.1e-60	74.39	zinc finger protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111445220 PE=4 SV...	[more]
A0A6J1JW51	1.9e-60	74.23	zinc finger protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111489415 PE=4 SV=1	[more]
A0A0A0LQ31	5.7e-25	72.94	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404810 P...	[more]
A0A4S4DGM3	2.1e-19	45.45	C2H2-type domain-containing protein OS=Camellia sinensis var. sinensis OX=542762...	[more]
A0A6A1VGC0	2.7e-19	37.88	Zinc finger protein 6 OS=Morella rubra OX=262757 GN=CJ030_MR6G021594 PE=4 SV=1	[more]

BLAST of Lcy09g000730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886238.1	2.6e-64	77.11	zinc finger protein 6-like [Benincasa hispida]	[more]
XP_022939247.1	2.3e-60	74.39	zinc finger protein 6-like [Cucurbita moschata]	[more]
KAG6578343.1	3.0e-60	74.85	Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023550962.1	3.0e-60	74.85	zinc finger protein 6-like [Cucurbita pepo subsp. pepo] >KAG7015922.1 Zinc finge...	[more]
XP_022993371.1	3.9e-60	74.23	zinc finger protein 6-like [Cucurbita maxima]	[more]

BLAST of Lcy09g000730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67030.1	3.0e-18	49.56	zinc finger protein 6	[more]
AT1G68360.1	4.5e-14	55.88	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G10480.1	7.4e-09	39.13	zinc finger protein 5	[more]
AT2G41940.1	1.6e-08	44.62	zinc finger protein 8	[more]
AT3G58070.1	3.7e-08	40.00	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 31..90 e-value: 1.6E-5 score: 26.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..36
None	No IPR available	PANTHER	PTHR46353:SF9	ZINC FINGER PROTEIN GIS3	coord: 3..134
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 3..134
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 44..64
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 42..69 score: 11.551563
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 41..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g000730.1	Lcy09g000730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010090	trichome morphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding