
Lcy09g000620 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATCCACTGTGAGAAGGCAGAGGAGAAAGCGGTGTGCTTTGGTATACTAGAATGAAGCTGCATTGCGCAACTCTTCAGACCTCCTTCTCTTTCCCTGTCAGAGGCAGAGTTCTCGCTCATGGAGACGCCTCCGCCGCCTGCTCTCCCTCCTCGTGCTCGCTTTCAAGAATTCCAGCTCGAAATTTCTCATTGGGTTCAAAAAGTAGAGGTAAGGTAACTGAACTTTCAATTTCTCATTGTTAAAGTTTCCGATGAATCGCGAACATAAGACAATGAGATTGATTGAGATTGATACCTCTGTATACAGTATACCTCAGTTATATTGCTCAACGCTTTCAATTTCTGCCGGTTGTTGAAAGGAGAGCGTCGAGGAAAAGGACGTAGTTTTTGATTATGTGCTCTATTCGCATTCTGCTCGTCATATGATTGAATTATTCATGGCTTTGAAGATGGTCCTTAAGAATTTTTGAACGGAAAACCGAAACTCGGAAATTTGGCTGTAAAAATTTTATATGTATGTCTGTATGCATTGGTCTAGATGTCGAATATCTTTTGTTTAAATTATTGATTCCTCATAGTTCGTATCCCAACGTCTTATGAAGCCTCATGTTGACTTTGCAGTCCCAAAGTGAAGGCAGCATGTGTTGTTTTAAATTGTAGAAAATTTTATATTGCAAGTTTATCTTCAAAGTTCATTCTTCTCGGGCTTAGAAAAAAGAAAAAAGCTTGTTTAACAACATAGAGTGACGTATTATTTTATTTTGTTGAATACCAGGGTTCCCCTCACTGGTCTGTCGAGTTAGACTGAAGAAATCATCATTTTCTGCCGTTGTCAGAGGGGAGAGTGCAGTACCTAGTGATTGTAGTTCAGAAACTCTTGATTCTTTGAATCCCACTCCCAGTGAGCCAGTAGGAAATGTTCAAAATGTAAAAGATGGCGTTGAATGCTTGGACCAGCATAAAATGACCAAAGTGTGTGACAAGCTCATTGAAGTCTTTCTGGTCGACAAGCCAACTCCAACAGATTGGAGACGATTAGTCGCTTTCAGCAAGGAATGGGACAATATCCGGCCCCATTTCTGTAGGAGGTGCCAAGATCGAGCTGCCAGTGAGGATGATCCTGGGATGCAGCATAAGCTACTCCGGCTTGGAAGAAAGCTGAAAGAGGTCAGTCTTGTTTATTCCGCAAATAAGAAGAGTGGAAACTAACACTTCGTGTGCAAATGAGGTTAATCATCAGTTCTATTGGTGTAAGAGAGCCACATATGATGTGTTGCTGAACGAAGAAACAAGATGAATTGTTGATGATACGTGATATTATTTTACTGATCACGTAGTTGCAGTATGTGAGTTGTTAATCATGTTCTTTTTGTTTCTTTTCTTGTTAATTTTTGCAGATTGATGAAGATGTGCAGAGACATAATGAACTTCTTGAAGTTATCAGAGCAGCAGCACCATCGGAACTTGGTGAAATTGTTTCTAGGCGTCGTAAAGATTTTACAAAAGAATTCTTTGTGCATCTTCACACAGTGGCCGAATCTTATTATGATGATCCGACTGAGCAAAATTGTAATACTGCATACTTTTTAGTCTGCAAAATACTTATGAACTTCTCTTGTTGACAGTGGTGAATAATTAGATTTCTAAGTGGTTGAGGAAGTGTATTTTAGGGAGCAACCTATTCAAAGAATGATTGTGCAACCTAAGCATAGCTTGATTGGGGTACACAAAATCACTTACTTTGTAGGGTGGGCCCTGTACCATGAATGGTGACGCAAAGCTTTTGTAAGAAACCTTAGTCAGAAAGCTCTCTCTCTATAAGATCAGACTAAAAGCTGATCCATTTGACATGAAGGCGTCTTACTATGATATGGTACATTAGGTCCTTTTTTTTTTTTTTGATGAGAAATCGAGCTTTTACACTAGGACAATTTTTCGTTTCCTATCCAATCAAGGATAAAATAAATTTACTCTGTGAAGTATATTTTTTAGGTAATCATTGTTATGACTATAATTTGGGATGGGTGGTTGAAAAGGAATAGAGTACCTTGGAAAGAGATACTTTTATACGCCTCGGGTATCATGAACCTTAATCACAGAGGAATTCAGGAACATCCATCTTTCTTGGACTTTTAACAAGTGGTTTGCTCATTTATAATTAGTTCCTCTCCCTCAAAAGTGTGTTTGGATCTCCTCTTTGTTATTAAGTTACGACATCTTCATTCTTTTTTTATGCATATGTAAGAGTATGACATGGTATTGGCACGGATGAATTGATATTCTTTCCCCTTATATTTCAATTGGTAAGCTTTGGCAAAGCTTGGGAACTCCTGCCTGGCTGCTGTGCAAGCATACGATGCTGCAACCGAAAACATTGAAGCACTAAATGCCGCGGAGTTGAAATTCCAGGATATCATCAATTCTCCAACTTTAGATGCTGCTTGCAGAAAGATAGACAGTTTGGCGGAGAAAAATCAACTTGATTCTGCATTAGTATTGATGATTACAAAAGCTTGGTCAGCTGCAAAGGAGTCGAACATGATGAAAGATGAGGTAATGCATTTTCTACCCTTGCTGTTCGCCATTGATGCGAACATGTAGTTTTATGTTCTTATATGTATAATCTAGTTGGTTGGCATTATCCGACCATTCAAGAAATTCCAATGACTGTGCTGAGTAGTAATTACTGAAACTTCCAATTACGCCTCAAATACTGTTTTCTGTTTGAATGAAATGACTACAGCTTAAGACACTGGAGTATGTCGGGTCGTTAGAGCAAATGGAGAAGACACGTTTAGTTGATGTACTATTATTGTGTAATGACTTTTTTGTGGTGAAAGTATTGATGATTTTCTTCTCTTCCTCAGGTGAAAGACATACTATACCACTTGTACGTGACTGCAAGCGGCAACCTTCAAAGATTAATGCCAAAAGAAATCAGGATTCTGAAGTATCTTCTCACAATCAAGGATCCAGAGGAGAAGCTAAGTGCCCTGAAGGATGCATTTACCCCTGGAGAAGAACTTGAAGGACAAGACGTGGACTGCTTATACACGTATGCTTTTGGACCTTATTGTTAAGAATATGTTGAAATATTTAATATGCCATAATCTATTAGCTTAAACCCAAAAATAGTGAGTTAATATGATATCAGATTAACATGTTCTAAGGTTCTATGTTCAAACTTTTGTGGTGTTATTTTCTTATCAGTAATATTGATAGTCCACTTATTGGATATTGTGCAAATTTTGTAGTCTATGAATGGGAGAGTGTTAAGAGTATATTAAAAGGATCTAGGACAGGTTTGAGAGTGATTTTAGTAAAAATGATTTGTTTATGAGAGTTTTTTTTAGGATCATTTTAATGTTCGGTTTTACATTTTTTAAACGCGATGTTCATACCATCAAAATTAATTTGAATGATTTAATGCATGTTTGTGAGTGATTTTGAACATGACAAAAGTAATTTTAATCCTTTCAAAATCACTCTTAAACATGTTATAAAAATAATCGAACTTATTAGCAGTGATTTAACACCCTGTAATTGGTTTTTTCTTTTTGGAACACTTTTAGGACACCAGAGAAGCTTCACACGTGGATAAAGACAGTGCTGGATGCTTATCATTTCAGCCGGGAAGGCACCCTCGTAAAGGAAGCCAGAGATCTTATGAATCCACAGGTCATCGTTAAACTTGAGGAATTGAAACATCTCGTTGAGAAAAAATTCATGTGAGGTAAAACATCATCAGTAGTATTGCACACTGATTCAAAAGGATTTGGTAGTTAGGTATTAATTTCGGTCTTGAGTTATTGAAAAGTTGTATAGTAGATTTTTCTTCTGTTGTATAACAAAATGAATGTGAATAATGGTTATATTTATTCAAAATCATTTATTTTGTCATGGAATTGAAGTATAGTTCAAGTGGCTAGATATTTGTTCCTTTTTACGGTTAAGTTTTGTGTTAGAATCTCTTCTCTCTTATTTCCAATGAAGTATTCTTGGAAAAAGAGTGTTTTTTTTTTCTAATTAATAATATTTTATGTCCCCTTAGTTTGCCATTTGGATACTTCTTTTGTATTTTG AAAATCCACTGTGAGAAGGCAGAGGAGAAAGCGGTGTGCTTTGGTATACTAGAATGAAGCTGCATTGCGCAACTCTTCAGACCTCCTTCTCTTTCCCTGTCAGAGGCAGAGTTCTCGCTCATGGAGACGCCTCCGCCGCCTGCTCTCCCTCCTCGTGCTCGCTTTCAAGAATTCCAGCTCGAAATTTCTCATTGGGTTCAAAAAGTAGAGGGTTCCCCTCACTGGTCTGTCGAGTTAGACTGAAGAAATCATCATTTTCTGCCGTTGTCAGAGGGGAGAGTGCAGTACCTAGTGATTGTAGTTCAGAAACTCTTGATTCTTTGAATCCCACTCCCAGTGAGCCAGTAGGAAATGTTCAAAATGTAAAAGATGGCGTTGAATGCTTGGACCAGCATAAAATGACCAAAGTGTGTGACAAGCTCATTGAAGTCTTTCTGGTCGACAAGCCAACTCCAACAGATTGGAGACGATTAGTCGCTTTCAGCAAGGAATGGGACAATATCCGGCCCCATTTCTGTAGGAGGTGCCAAGATCGAGCTGCCAGTGAGGATGATCCTGGGATGCAGCATAAGCTACTCCGGCTTGGAAGAAAGCTGAAAGAGATTGATGAAGATGTGCAGAGACATAATGAACTTCTTGAAGTTATCAGAGCAGCAGCACCATCGGAACTTGGTGAAATTGTTTCTAGGCGTCGTAAAGATTTTACAAAAGAATTCTTTGTGCATCTTCACACAGTGGCCGAATCTTATTATGATGATCCGACTGAGCAAAATTCTTTGGCAAAGCTTGGGAACTCCTGCCTGGCTGCTGTGCAAGCATACGATGCTGCAACCGAAAACATTGAAGCACTAAATGCCGCGGAGTTGAAATTCCAGGATATCATCAATTCTCCAACTTTAGATGCTGCTTGCAGAAAGATAGACAGTTTGGCGGAGAAAAATCAACTTGATTCTGCATTAGTATTGATGATTACAAAAGCTTGGTCAGCTGCAAAGGAGTCGAACATGATGAAAGATGAGGTGAAAGACATACTATACCACTTGTACGTGACTGCAAGCGGCAACCTTCAAAGATTAATGCCAAAAGAAATCAGGATTCTGAAGTATCTTCTCACAATCAAGGATCCAGAGGAGAAGCTAAGTGCCCTGAAGGATGCATTTACCCCTGGAGAAGAACTTGAAGGACAAGACGTGGACTGCTTATACACGACACCAGAGAAGCTTCACACGTGGATAAAGACAGTGCTGGATGCTTATCATTTCAGCCGGGAAGGCACCCTCGTAAAGGAAGCCAGAGATCTTATGAATCCACAGGTCATCGTTAAACTTGAGGAATTGAAACATCTCGTTGAGAAAAAATTCATGTGAGGTAAAACATCATCAGTAGTATTGCACACTGATTCAAAAGGATTTGGTAGTTAGGTATTAATTTCGGTCTTGAGTTATTGAAAAGTTGTATAGTAGATTTTTCTTCTGTTGTATAACAAAATGAATGTGAATAATGGTTATATTTATTCAAAATCATTTATTTTGTCATGGAATTGAAGTATAGTTCAAGTGGCTAGATATTTGTTCCTTTTTACGGTTAAGTTTTGTGTTAGAATCTCTTCTCTCTTATTTCCAATGAAGTATTCTTGGAAAAAGAGTGTTTTTTTTTTCTAATTAATAATATTTTATGTCCCCTTAGTTTGCCATTTGGATACTTCTTTTGTATTTTG ATGAAGCTGCATTGCGCAACTCTTCAGACCTCCTTCTCTTTCCCTGTCAGAGGCAGAGTTCTCGCTCATGGAGACGCCTCCGCCGCCTGCTCTCCCTCCTCGTGCTCGCTTTCAAGAATTCCAGCTCGAAATTTCTCATTGGGTTCAAAAAGTAGAGGGTTCCCCTCACTGGTCTGTCGAGTTAGACTGAAGAAATCATCATTTTCTGCCGTTGTCAGAGGGGAGAGTGCAGTACCTAGTGATTGTAGTTCAGAAACTCTTGATTCTTTGAATCCCACTCCCAGTGAGCCAGTAGGAAATGTTCAAAATGTAAAAGATGGCGTTGAATGCTTGGACCAGCATAAAATGACCAAAGTGTGTGACAAGCTCATTGAAGTCTTTCTGGTCGACAAGCCAACTCCAACAGATTGGAGACGATTAGTCGCTTTCAGCAAGGAATGGGACAATATCCGGCCCCATTTCTGTAGGAGGTGCCAAGATCGAGCTGCCAGTGAGGATGATCCTGGGATGCAGCATAAGCTACTCCGGCTTGGAAGAAAGCTGAAAGAGATTGATGAAGATGTGCAGAGACATAATGAACTTCTTGAAGTTATCAGAGCAGCAGCACCATCGGAACTTGGTGAAATTGTTTCTAGGCGTCGTAAAGATTTTACAAAAGAATTCTTTGTGCATCTTCACACAGTGGCCGAATCTTATTATGATGATCCGACTGAGCAAAATTCTTTGGCAAAGCTTGGGAACTCCTGCCTGGCTGCTGTGCAAGCATACGATGCTGCAACCGAAAACATTGAAGCACTAAATGCCGCGGAGTTGAAATTCCAGGATATCATCAATTCTCCAACTTTAGATGCTGCTTGCAGAAAGATAGACAGTTTGGCGGAGAAAAATCAACTTGATTCTGCATTAGTATTGATGATTACAAAAGCTTGGTCAGCTGCAAAGGAGTCGAACATGATGAAAGATGAGGTGAAAGACATACTATACCACTTGTACGTGACTGCAAGCGGCAACCTTCAAAGATTAATGCCAAAAGAAATCAGGATTCTGAAGTATCTTCTCACAATCAAGGATCCAGAGGAGAAGCTAAGTGCCCTGAAGGATGCATTTACCCCTGGAGAAGAACTTGAAGGACAAGACGTGGACTGCTTATACACGACACCAGAGAAGCTTCACACGTGGATAAAGACAGTGCTGGATGCTTATCATTTCAGCCGGGAAGGCACCCTCGTAAAGGAAGCCAGAGATCTTATGAATCCACAGGTCATCGTTAAACTTGAGGAATTGAAACATCTCGTTGAGAAAAAATTCATGTGA MKLHCATLQTSFSFPVRGRVLAHGDASAACSPSSCSLSRIPARNFSLGSKSRGFPSLVCRVRLKKSSFSAVVRGESAVPSDCSSETLDSLNPTPSEPVGNVQNVKDGVECLDQHKMTKVCDKLIEVFLVDKPTPTDWRRLVAFSKEWDNIRPHFCRRCQDRAASEDDPGMQHKLLRLGRKLKEIDEDVQRHNELLEVIRAAAPSELGEIVSRRRKDFTKEFFVHLHTVAESYYDDPTEQNSLAKLGNSCLAAVQAYDAATENIEALNAAELKFQDIINSPTLDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKDEVKDILYHLYVTASGNLQRLMPKEIRILKYLLTIKDPEEKLSALKDAFTPGEELEGQDVDCLYTTPEKLHTWIKTVLDAYHFSREGTLVKEARDLMNPQVIVKLEELKHLVEKKFM Homology
BLAST of Lcy09g000620 vs. ExPASy Swiss-Prot
Match: Q84WN0 (Uncharacterized protein At4g37920 OS=Arabidopsis thaliana OX=3702 GN=At4g37920 PE=2 SV=2) HSP 1 Score: 301.6 bits (771), Expect = 1.4e-80 Identity = 153/374 (40.91%), Postives = 251/374 (67.11%), Query Frame = 0
BLAST of Lcy09g000620 vs. ExPASy TrEMBL
Match: A0A6J1DF51 (uncharacterized protein At4g37920, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020242 PE=4 SV=1) HSP 1 Score: 781.9 bits (2018), Expect = 1.3e-222 Identity = 396/439 (90.21%), Postives = 416/439 (94.76%), Query Frame = 0
BLAST of Lcy09g000620 vs. ExPASy TrEMBL
Match: A0A1S3B306 (uncharacterized protein At4g37920, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485431 PE=4 SV=1) HSP 1 Score: 781.9 bits (2018), Expect = 1.3e-222 Identity = 392/437 (89.70%), Postives = 413/437 (94.51%), Query Frame = 0
BLAST of Lcy09g000620 vs. ExPASy TrEMBL
Match: A0A1S3B2I9 (uncharacterized protein At4g37920, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485431 PE=4 SV=1) HSP 1 Score: 777.3 bits (2006), Expect = 3.3e-221 Identity = 392/438 (89.50%), Postives = 413/438 (94.29%), Query Frame = 0
BLAST of Lcy09g000620 vs. ExPASy TrEMBL
Match: A0A6J1JSR8 (uncharacterized protein At4g37920-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489439 PE=4 SV=1) HSP 1 Score: 771.5 bits (1991), Expect = 1.8e-219 Identity = 390/437 (89.24%), Postives = 409/437 (93.59%), Query Frame = 0
BLAST of Lcy09g000620 vs. ExPASy TrEMBL
Match: A0A6J1JWA0 (uncharacterized protein At4g37920-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489439 PE=4 SV=1) HSP 1 Score: 766.9 bits (1979), Expect = 4.5e-218 Identity = 390/438 (89.04%), Postives = 409/438 (93.38%), Query Frame = 0
BLAST of Lcy09g000620 vs. NCBI nr
Match: XP_038884061.1 (uncharacterized protein At4g37920 isoform X2 [Benincasa hispida]) HSP 1 Score: 790.0 bits (2039), Expect = 1.0e-224 Identity = 397/437 (90.85%), Postives = 416/437 (95.19%), Query Frame = 0
BLAST of Lcy09g000620 vs. NCBI nr
Match: XP_038884058.1 (uncharacterized protein At4g37920 isoform X1 [Benincasa hispida]) HSP 1 Score: 785.4 bits (2027), Expect = 2.5e-223 Identity = 397/438 (90.64%), Postives = 416/438 (94.98%), Query Frame = 0
BLAST of Lcy09g000620 vs. NCBI nr
Match: XP_008441243.1 (PREDICTED: uncharacterized protein At4g37920, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 781.9 bits (2018), Expect = 2.8e-222 Identity = 392/437 (89.70%), Postives = 413/437 (94.51%), Query Frame = 0
BLAST of Lcy09g000620 vs. NCBI nr
Match: XP_022152543.1 (uncharacterized protein At4g37920, chloroplastic [Momordica charantia]) HSP 1 Score: 781.9 bits (2018), Expect = 2.8e-222 Identity = 396/439 (90.21%), Postives = 416/439 (94.76%), Query Frame = 0
BLAST of Lcy09g000620 vs. NCBI nr
Match: XP_008441242.1 (PREDICTED: uncharacterized protein At4g37920, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 777.3 bits (2006), Expect = 6.9e-221 Identity = 392/438 (89.50%), Postives = 413/438 (94.29%), Query Frame = 0
BLAST of Lcy09g000620 vs. TAIR 10
Match: AT1G36320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 525.4 bits (1352), Expect = 4.4e-149 Identity = 256/335 (76.42%), Postives = 302/335 (90.15%), Query Frame = 0
BLAST of Lcy09g000620 vs. TAIR 10
Match: AT4G37920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36320.1); Has 123 Blast hits to 120 proteins in 40 species: Archae - 2; Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 301.6 bits (771), Expect = 1.0e-81 Identity = 153/374 (40.91%), Postives = 251/374 (67.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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