Lcy09g000600 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g000600
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr09: 572609 .. 576065 (+)
RNA-Seq Expression	Lcy09g000600
Synteny	Lcy09g000600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCACCATCTCCTCTACACCTCCATAAACCCCTTAACCAAACACACCCTTTCTCAGATTCCTTCAATCTCCATCATCTTCTCGCTCTCTTAAAAGCATTCAAATCCCACGGCCCTAAATCAAACACGTCGCAAATTCAAACCTCTCTCACACTCTCTTCATTTTATTTTTTTCTCACAATACATTGATTCTCCGCTTTCCTTTTCTCTCGCTACTTTCATTTTCCCTTTTGTCCTTCTTCTTACCTTCATTTTCTTTCACTTTCCCGCTGTTTTCTCCCTCGTTTTCTTTCGGCTTTTCCTCAGAAACTTCTCGCCTCGCCGAGCTTTTGCAGCTGCGCTTCAGGTATGCAAGAGATAATTCTAGTTTCGTTCTATTTTCCTCTTCTTGTTCTTCCTTTTTCTGTGTCTTACTAATTAGGTTTCAGATCTGGAAGAGATGATTCTAGGTTTTCGATTTTGCCTGAATGTTCGTTTTCTTCTTGTTTCTTTGTTTTTCTGGTTAGACAATGAGTTTTACGAGCTTGTGACTGTTTTCTCTTGCGATCTCGTGCTCGCTTGGACTGGTTGTGAACAGATCTAACGGTGTAGGTTGTTCTTGCGTTCTCTTTGTTTGCAGGTTCTTCGGACCGTACAACAATGGAGACTGAAACTTCTGTTCATCAGCGTTTGCTGCTAACGTGCGCCGGAGGCATTTCGGCCACGTTGCTTGGCCTCGTGGCCATGGCCGAGTTGCTTGCTTCATCTCAGGTGAAGTTACCGCGCGCTCTGTCTTCTTTCAACTTCGTTGATGATCGTGTTTGGTATATTGATTCTGTTTCCATAAATTTTCTTCTAATTTTTTTTATGAACTTTTGGATTTTGTTTTTTTTAAGAAAACGAGTTAGAAGCCGAAAATGATATTAAATATCATATCCACACACACAAAAAAAGAAAAATAAAATAATAAAATAAAATAAATCAGAATAACTCCTCGTGGTCTTTACTTTTTGAATTGTTTTTACAATAAGAAAGACGACATCTCGTGATAATTTTAATTATTATGACGCAAATGATTAGAGACTGAAATCAAAGAGCTTTAACCACTGGAAAAGTATAAATCATATTTTGTCTTATTTAAACTCTAGTTTCTTCGACCCTGTCGTTTCATGAAAGATGATATTCACGAGGTTTTTTTGTCCTCTAATATTTGAACTTTATTTTTCTTTTTCCCTTTTTAAATGCTTTTCCAAACGTTTTTCTTTTTCTTCTTTCTTTCTAAACGTGAAAACTTTTAGGCAGATATATATTTTATTTTTGGCTAAATATATAATGCTACGTTTAATTTTTGTCATTTTTAAAATTTTTGTCACATACCATTTAAAACTCTCGAGATTGTTTCTCCTATTATGGATTTATTTAAATGAATCCTTATCAAGATTTTCTTTTAGAGTTCAACATGTGGAGAGGAATTCAAACTTGTAACTTAGTTGAAAATATATTTCCTTAATCAATCGAGTTGTGTTAGCTCCTAATTGAGACATATATCATTAACTAAGAGATCAAATGTTCAAATCTCTTCAACTCACATGTTGAATAAAAAAAACCAATTGAACTATGTTGAGTTTAAAAAAAGTTTGTGTAAATTTAAAAATGATTTTTATGTGAATGTTGCATTTTCTATAGCGAAAAAAAAAAATTAAATGAGCAAGTCAGTAATGTGTAGTGAGGTTATTTATTTATTTATTTATTTTAAATGGACAAGCATATCTATTAAATCAAATTAAAATATAGAACATTTTAAACCAAGTTAATGATTTTTTTCTTTTCCATCTCGTGTTGTCGTTTTGTCATTAAACTTTAACATACAAAGATAGCAAGGTCTTGACTGGAAAAAAATCAATATATAAAGAATATAATTAATTTTTTTAAAAGATTATGAACAAAATTGAAAAATGCCTTAAACATTATGAACTACATTTAATTAAGTCAAAACTTAATAAGAAAAAAGTTAATGATTATATGTAAATGTTTTTTTAAAAGTTTTTGTAGATCTTAAATACCATAATATTTATAATATATAAATTTATAAAATCAAGAAATATTACAATGTATTCTTTTCTAATAACACCTTTTTATTAGGGTAGGTTGTTGGTGTATATATATATATATATAGTTAATAGAAGTACGATGTGTGTCCATGATAATATACATGAACATTAAGACCGACGTAGAAGTCCGTATAGACAACCTAACTTATAAATTCTAGCAAGATAGTTCATCTAAAACATTTTTTTTCTAAAGCCAAGATCATCTTAAACTTGGAAAACAAATATGATAACTTTTTGAATCTTTGTGATTAATATATGGCAATAAGCGTGACAAACGATTTATTCGTAGGTATATATTGATTTTATCGGATGATATTGATATTATTAAATGGTGATACACTGCAATTTTCTTTTTATCTATAATTTGTGGCTCAACACTGCCTTCTGTGAGCAATGAGGTCCACCGTTTTGTCCAAATCCTAATCCCCTCGCCCACAGTGGGCCACGAAGAATCGAATCGCATGCGGGGACAATGCGCCGCTTTCCGGAATTTTCTTTATTTCATTATTCCTTTTTGTCACTTTCCTGGTTTTATCTTTTTGGTCTCTTTTAGCTGATCATCAATCTATATTTAAGCGTAGCTGTTTCTTGAATTTTGTTTAACTCTCCAATGGGGTATATCTCTCCCGCGGAATTCTAATTGATTTTTCATACAGTTCCCGAACGAGAAAAGGAAATTCGCTTCTACGAAATGTCAGTCGACAAAACCGACCGATGGAGGGGAAAATGAAAACGAGACTAATGACAGTGATAATGACCTTGGAGAAGACCAAGATGTGCTTGAAAATGGTGAGGAGGAAGATGGTAAAAATGCTCCCACTAAAGAGGATGGAGGGGATGCGGGCAATGATAACGGCGATGGTGGAAGTGAGAACAGTGATGAAGGTGGTGACGATGAAGATGATGATGGTGGGACTGATGAGAATGATAAAGAAAATAACAACGATGAAGAAGACGTGGACGAAGAAGATGAAGAGGAAGACAACTTTGAAGGAGAAGAAGATGAAGAAACCCTCCCACCACCAAAGAAGAGAAAGAAGTAAAAGAGTGATCGAGAAATATGCTAACTGTGAAAGCACTTTCTAATTATCTTTCCCAAACTAATGAGACTGCTTCCAATTGTATGTTTTTGGAGACTAAAAGCTCCTCTCAACTTTCAAGACATGGTTTAGCCAATTTGACCTAAACAAAGCAATCGCTATCTTAGTGTAATAGCGTTTGTATGCTGATGTTTTATATTGAAGTTCCTTTGTTCAATTCAACGAGGTCTAGAAAAGCAGAGCTTTCTGTTCTTCTGAATGCGAAATCAAAATACCATCCCCAACAAAAAACAGACAAGACATTGGACCATTTTCCAAACTTAAAAA

mRNA sequence

TTCCCACCATCTCCTCTACACCTCCATAAACCCCTTAACCAAACACACCCTTTCTCAGATTCCTTCAATCTCCATCATCTTCTCGCTCTCTTAAAAGCATTCAAATCCCACGGCCCTAAATCAAACACGTCGCAAATTCAAACCTCTCTCACACTCTCTTCATTTTATTTTTTTCTCACAATACATTGATTCTCCGCTTTCCTTTTCTCTCGCTACTTTCATTTTCCCTTTTGTCCTTCTTCTTACCTTCATTTTCTTTCACTTTCCCGCTGTTTTCTCCCTCGTTTTCTTTCGGCTTTTCCTCAGAAACTTCTCGCCTCGCCGAGCTTTTGCAGCTGCGCTTCAGGTTCTTCGGACCGTACAACAATGGAGACTGAAACTTCTGTTCATCAGCGTTTGCTGCTAACGTGCGCCGGAGGCATTTCGGCCACGTTGCTTGGCCTCGTGGCCATGGCCGAGTTGCTTGCTTCATCTCAGTTCCCGAACGAGAAAAGGAAATTCGCTTCTACGAAATGTCAGTCGACAAAACCGACCGATGGAGGGGAAAATGAAAACGAGACTAATGACAGTGATAATGACCTTGGAGAAGACCAAGATGTGCTTGAAAATGGTGAGGAGGAAGATGGTAAAAATGCTCCCACTAAAGAGGATGGAGGGGATGCGGGCAATGATAACGGCGATGGTGGAAGTGAGAACAGTGATGAAGGTGGTGACGATGAAGATGATGATGGTGGGACTGATGAGAATGATAAAGAAAATAACAACGATGAAGAAGACGTGGACGAAGAAGATGAAGAGGAAGACAACTTTGAAGGAGAAGAAGATGAAGAAACCCTCCCACCACCAAAGAAGAGAAAGAAGTAAAAGAGTGATCGAGAAATATGCTAACTGTGAAAGCACTTTCTAATTATCTTTCCCAAACTAATGAGACTGCTTCCAATTGTATGTTTTTGGAGACTAAAAGCTCCTCTCAACTTTCAAGACATGGTTTAGCCAATTTGACCTAAACAAAGCAATCGCTATCTTAGTGTAATAGCGTTTGTATGCTGATGTTTTATATTGAAGTTCCTTTGTTCAATTCAACGAGGTCTAGAAAAGCAGAGCTTTCTGTTCTTCTGAATGCGAAATCAAAATACCATCCCCAACAAAAAACAGACAAGACATTGGACCATTTTCCAAACTTAAAAA

Coding sequence (CDS)

ATGGAGACTGAAACTTCTGTTCATCAGCGTTTGCTGCTAACGTGCGCCGGAGGCATTTCGGCCACGTTGCTTGGCCTCGTGGCCATGGCCGAGTTGCTTGCTTCATCTCAGTTCCCGAACGAGAAAAGGAAATTCGCTTCTACGAAATGTCAGTCGACAAAACCGACCGATGGAGGGGAAAATGAAAACGAGACTAATGACAGTGATAATGACCTTGGAGAAGACCAAGATGTGCTTGAAAATGGTGAGGAGGAAGATGGTAAAAATGCTCCCACTAAAGAGGATGGAGGGGATGCGGGCAATGATAACGGCGATGGTGGAAGTGAGAACAGTGATGAAGGTGGTGACGATGAAGATGATGATGGTGGGACTGATGAGAATGATAAAGAAAATAACAACGATGAAGAAGACGTGGACGAAGAAGATGAAGAGGAAGACAACTTTGAAGGAGAAGAAGATGAAGAAACCCTCCCACCACCAAAGAAGAGAAAGAAGTAA

Protein sequence

METETSVHQRLLLTCAGGISATLLGLVAMAELLASSQFPNEKRKFASTKCQSTKPTDGGENENETNDSDNDLGEDQDVLENGEEEDGKNAPTKEDGGDAGNDNGDGGSENSDEGGDDEDDDGGTDENDKENNNDEEDVDEEDEEEDNFEGEEDEETLPPPKKRKK

Homology

[Close]

BLAST of Lcy09g000600 vs. ExPASy TrEMBL
Match: A0A0A0LSW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G403660 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.8e-39
Identity = 128/186 (68.82%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   METET-SVHQRLLLTCAGGISATLLGLVAMAELLASSQF-----------PNEKRKFAST 60
           ME ET SVHQRLLLT AGGISATL G VA+AELLASSQF            +EKRK  S 
Sbjct: 1   MEIETASVHQRLLLTFAGGISATLFGFVALAELLASSQFLDSNKMDVIDASDEKRKSKSR 60

Query: 61  KCQSTKPTDGGENENETNDSDNDLGEDQDVLENGEEEDGKNAPTKEDGGDAG-----NDN 120
           KCQ+T+P +G ENENE NDSDN+LGEDQDV ENGEE  GKNAP  +DG + G     NDN
Sbjct: 61  KCQTTRPIEGEENENENNDSDNELGEDQDVHENGEE--GKNAPPTKDGANGGGEDGSNDN 120

Query: 121 GDGGSENSDEGGDDED---DDGGTDENDKENNNDEEDVDEEDEEEDNFEGEE-DEETLPP 166
           GDGGSENS EGGD+E+   DDGG+DEN+++NN D++DVDEED EEDNFEGEE DEETLPP
Sbjct: 121 GDGGSENSGEGGDEEEEENDDGGSDENNEDNNEDDDDVDEEDAEEDNFEGEEDDEETLPP 180

[Close]

BLAST of Lcy09g000600 vs. ExPASy TrEMBL
Match: A0A6J1DGC0 (uncharacterized protein DDB_G0290685-like OS=Momordica charantia OX=3673 GN=LOC111020187 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.1e-39
Identity = 130/178 (73.03%), Postives = 144/178 (80.90%), Query Frame = 0


Query: 1   METE-TSVHQRLLLTCAGGISATLLGLVAMAELLASSQF----PNEKRKFASTKCQSTKP 60
           METE +SVH+RLLLTCAGGISA LL L+AMAELLASSQF     NEKR     KCQ  KP
Sbjct: 1   METESSSVHRRLLLTCAGGISAMLLSLMAMAELLASSQFLNSNANEKR-----KCQ-RKP 60

Query: 61  TDGGENENETNDSDNDLGEDQDVLENGEEEDGKNAPTKE---DGGDAG--NDNGDGGSEN 120
            DG  NENE N SDNDLGED+DVLENGEEE GKNAP KE    GGDAG  NDN DGGS+N
Sbjct: 61  VDGEGNENENNYSDNDLGEDEDVLENGEEE-GKNAPIKEGANGGGDAGNSNDNDDGGSDN 120

Query: 121 SDEGGDDEDDDGGTDENDKENNNDEEDVDEED---EEEDNFEGEEDEETLPPPKKRKK 166
           S +GGDD++DDGG+D+ND++NN D+EDVDE+D   EEEDNFEGEEDEETLPPPKKRKK
Sbjct: 121 SGDGGDDDNDDGGSDDNDEDNNEDDEDVDEDDADAEEEDNFEGEEDEETLPPPKKRKK 171

[Close]

BLAST of Lcy09g000600 vs. ExPASy TrEMBL
Match: A0A1S3B301 (uncharacterized protein DDB_G0290685-like OS=Cucumis melo OX=3656 GN=LOC103485427 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.5e-38
Identity = 126/183 (68.85%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 1   METE-TSVHQRLLLTCAGGISATLLGLVAMAELLASSQF-----------PNEKRKFAST 60
           ME E +SVHQRLLLT A GISATL G VA+AELLAS++F            NEKRK  S 
Sbjct: 1   MEIENSSVHQRLLLTFAAGISATLFGFVALAELLASTEFLDSNKMDVIDASNEKRKSKSR 60

Query: 61  KCQSTKPTDGGENENETNDSDNDLGEDQDVLENGEEEDGKNAPTKEDGG---DAGNDNGD 120
           KCQ+T+ TDG ENENE NDSDN+LG+ QDV ENGEEE GKNAPTK+      D  NDNGD
Sbjct: 61  KCQTTRLTDGEENENENNDSDNELGDGQDVHENGEEE-GKNAPTKDGANGEEDGSNDNGD 120

Query: 121 GGSENSDEGGDDED--DDGGTDENDKENNNDEEDVDEEDEEEDNFEGEE-DEETLPPPKK 166
           GGSENS EGGDDE+  DDGG+DEN+++NN D++DVDEED EEDNFEGEE DEETLPPPKK
Sbjct: 121 GGSENSGEGGDDEEENDDGGSDENNEDNNEDDDDVDEEDAEEDNFEGEEDDEETLPPPKK 180

[Close]

BLAST of Lcy09g000600 vs. ExPASy TrEMBL
Match: A0A6J1FG81 (uncharacterized protein DDB_G0290685-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445132 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 5.6e-36
Identity = 124/182 (68.13%), Postives = 138/182 (75.82%), Query Frame = 0


Query: 1   METET-SVHQRLLLTCAGGISATLLGLVAMAELLASSQF--PNE---------KRKFAST 60
           MET T S+HQRLLL CAG  SATLLGLVAMAELLASSQF  PNE         KRKF S 
Sbjct: 11  METATSSIHQRLLLACAGSTSATLLGLVAMAELLASSQFLAPNEMDAIAVFNKKRKFTSG 70

Query: 61  KCQSTKPTDGGENENETNDSDNDLGEDQDVLENGEEEDGKNAPTKE---DGGDAGNDNGD 120
           K Q+     GGENEN+ NDSDN+ G++QD LENG  EDGKNAPTK+    G +A NDNGD
Sbjct: 71  KRQT-----GGENENQNNDSDNEHGDEQDALENG--EDGKNAPTKDGANGGEEASNDNGD 130

Query: 121 GGSENSDEGGDDED--DDGGTDENDKENNNDEEDVDEEDEEEDNFEGEEDEETLPPPKKR 166
           GGSENS +GG DED  DDGG++END++N  DEED DEED EED FEGE+DEETLPPPKKR
Sbjct: 131 GGSENSGDGGGDEDDEDDGGSEENDEDNKEDEEDFDEEDVEEDTFEGEDDEETLPPPKKR 185

[Close]

BLAST of Lcy09g000600 vs. ExPASy TrEMBL
Match: A0A6J1FLT8 (uncharacterized protein DDB_G0290685-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445132 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 5.6e-36
Identity = 124/182 (68.13%), Postives = 138/182 (75.82%), Query Frame = 0


Query: 1   METET-SVHQRLLLTCAGGISATLLGLVAMAELLASSQF--PNE---------KRKFAST 60
           MET T S+HQRLLL CAG  SATLLGLVAMAELLASSQF  PNE         KRKF S 
Sbjct: 1   METATSSIHQRLLLACAGSTSATLLGLVAMAELLASSQFLAPNEMDAIAVFNKKRKFTSG 60

Query: 61  KCQSTKPTDGGENENETNDSDNDLGEDQDVLENGEEEDGKNAPTKE---DGGDAGNDNGD 120
           K Q+     GGENEN+ NDSDN+ G++QD LENG  EDGKNAPTK+    G +A NDNGD
Sbjct: 61  KRQT-----GGENENQNNDSDNEHGDEQDALENG--EDGKNAPTKDGANGGEEASNDNGD 120

Query: 121 GGSENSDEGGDDED--DDGGTDENDKENNNDEEDVDEEDEEEDNFEGEEDEETLPPPKKR 166
           GGSENS +GG DED  DDGG++END++N  DEED DEED EED FEGE+DEETLPPPKKR
Sbjct: 121 GGSENSGDGGGDEDDEDDGGSEENDEDNKEDEEDFDEEDVEEDTFEGEDDEETLPPPKKR 175

[Close]

BLAST of Lcy09g000600 vs. NCBI nr
Match: XP_038885474.1 (uncharacterized protein DDB_G0290685-like isoform X1 [Benincasa hispida])

HSP 1 Score: 177.6 bits (449), Expect = 9.1e-41
Identity = 130/186 (69.89%), Postives = 147/186 (79.03%), Query Frame = 0


Query: 1   METET-SVHQRLLLTCAGGISATLLGLVAMAELLASSQF-----------PNEKRKFAST 60
           METET SVHQRLLL CA  ISATLLG VA+AELL SSQF             EKRK  S 
Sbjct: 12  METETSSVHQRLLLRCARCISATLLGFVALAELLVSSQFLDSNKMDVIDASEEKRKSKSR 71

Query: 61  KCQSTKPTDGGENENETNDSDNDLGEDQDVLENGEEEDGKNAPTKE--DGGD-AGNDNGD 120
           +CQ+TKP DG ENENE NDSDN+LGEDQDVLENGEEE+GKNAPTK+  +GGD A NDNGD
Sbjct: 72  QCQTTKPIDGEENENENNDSDNELGEDQDVLENGEEEEGKNAPTKDGANGGDGASNDNGD 131

Query: 121 GGSENSDEGGDDED--DDGGTDE----NDKENNNDEEDVDEEDEEEDNFEGEEDEETLPP 166
           GG ENS EGGDDE+  DDGG+DE    N+++NN D+ED+DEED EED+FEG++DEETLPP
Sbjct: 132 GGIENSGEGGDDEEDNDDGGSDENNEDNNEDNNEDDEDIDEEDAEEDHFEGDDDEETLPP 191

[Close]

BLAST of Lcy09g000600 vs. NCBI nr
Match: XP_038885476.1 (uncharacterized protein DDB_G0290685-like isoform X2 [Benincasa hispida] >XP_038885477.1 uncharacterized protein DDB_G0290685-like isoform X2 [Benincasa hispida])

HSP 1 Score: 177.6 bits (449), Expect = 9.1e-41
Identity = 130/186 (69.89%), Postives = 147/186 (79.03%), Query Frame = 0


Query: 1   METET-SVHQRLLLTCAGGISATLLGLVAMAELLASSQF-----------PNEKRKFAST 60
           METET SVHQRLLL CA  ISATLLG VA+AELL SSQF             EKRK  S 
Sbjct: 1   METETSSVHQRLLLRCARCISATLLGFVALAELLVSSQFLDSNKMDVIDASEEKRKSKSR 60

Query: 61  KCQSTKPTDGGENENETNDSDNDLGEDQDVLENGEEEDGKNAPTKE--DGGD-AGNDNGD 120
           +CQ+TKP DG ENENE NDSDN+LGEDQDVLENGEEE+GKNAPTK+  +GGD A NDNGD
Sbjct: 61  QCQTTKPIDGEENENENNDSDNELGEDQDVLENGEEEEGKNAPTKDGANGGDGASNDNGD 120

Query: 121 GGSENSDEGGDDED--DDGGTDE----NDKENNNDEEDVDEEDEEEDNFEGEEDEETLPP 166
           GG ENS EGGDDE+  DDGG+DE    N+++NN D+ED+DEED EED+FEG++DEETLPP
Sbjct: 121 GGIENSGEGGDDEEDNDDGGSDENNEDNNEDNNEDDEDIDEEDAEEDHFEGDDDEETLPP 180

[Close]

BLAST of Lcy09g000600 vs. NCBI nr
Match: XP_011649914.1 (uncharacterized protein DDB_G0290685 isoform X2 [Cucumis sativus] >KGN63111.1 hypothetical protein Csa_021930 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 3.8e-39
Identity = 128/186 (68.82%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   METET-SVHQRLLLTCAGGISATLLGLVAMAELLASSQF-----------PNEKRKFAST 60
           ME ET SVHQRLLLT AGGISATL G VA+AELLASSQF            +EKRK  S 
Sbjct: 1   MEIETASVHQRLLLTFAGGISATLFGFVALAELLASSQFLDSNKMDVIDASDEKRKSKSR 60

Query: 61  KCQSTKPTDGGENENETNDSDNDLGEDQDVLENGEEEDGKNAPTKEDGGDAG-----NDN 120
           KCQ+T+P +G ENENE NDSDN+LGEDQDV ENGEE  GKNAP  +DG + G     NDN
Sbjct: 61  KCQTTRPIEGEENENENNDSDNELGEDQDVHENGEE--GKNAPPTKDGANGGGEDGSNDN 120

Query: 121 GDGGSENSDEGGDDED---DDGGTDENDKENNNDEEDVDEEDEEEDNFEGEE-DEETLPP 166
           GDGGSENS EGGD+E+   DDGG+DEN+++NN D++DVDEED EEDNFEGEE DEETLPP
Sbjct: 121 GDGGSENSGEGGDEEEEENDDGGSDENNEDNNEDDDDVDEEDAEEDNFEGEEDDEETLPP 180

[Close]

BLAST of Lcy09g000600 vs. NCBI nr
Match: XP_004138812.2 (uncharacterized protein DDB_G0290685 isoform X1 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 3.8e-39
Identity = 128/186 (68.82%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   METET-SVHQRLLLTCAGGISATLLGLVAMAELLASSQF-----------PNEKRKFAST 60
           ME ET SVHQRLLLT AGGISATL G VA+AELLASSQF            +EKRK  S 
Sbjct: 11  MEIETASVHQRLLLTFAGGISATLFGFVALAELLASSQFLDSNKMDVIDASDEKRKSKSR 70

Query: 61  KCQSTKPTDGGENENETNDSDNDLGEDQDVLENGEEEDGKNAPTKEDGGDAG-----NDN 120
           KCQ+T+P +G ENENE NDSDN+LGEDQDV ENGEE  GKNAP  +DG + G     NDN
Sbjct: 71  KCQTTRPIEGEENENENNDSDNELGEDQDVHENGEE--GKNAPPTKDGANGGGEDGSNDN 130

Query: 121 GDGGSENSDEGGDDED---DDGGTDENDKENNNDEEDVDEEDEEEDNFEGEE-DEETLPP 166
           GDGGSENS EGGD+E+   DDGG+DEN+++NN D++DVDEED EEDNFEGEE DEETLPP
Sbjct: 131 GDGGSENSGEGGDEEEEENDDGGSDENNEDNNEDDDDVDEEDAEEDNFEGEEDDEETLPP 190

[Close]

BLAST of Lcy09g000600 vs. NCBI nr
Match: XP_022152467.1 (uncharacterized protein DDB_G0290685-like [Momordica charantia] >XP_022152468.1 uncharacterized protein DDB_G0290685-like [Momordica charantia])

HSP 1 Score: 171.0 bits (432), Expect = 8.5e-39
Identity = 130/178 (73.03%), Postives = 144/178 (80.90%), Query Frame = 0


Query: 1   METE-TSVHQRLLLTCAGGISATLLGLVAMAELLASSQF----PNEKRKFASTKCQSTKP 60
           METE +SVH+RLLLTCAGGISA LL L+AMAELLASSQF     NEKR     KCQ  KP
Sbjct: 1   METESSSVHRRLLLTCAGGISAMLLSLMAMAELLASSQFLNSNANEKR-----KCQ-RKP 60

Query: 61  TDGGENENETNDSDNDLGEDQDVLENGEEEDGKNAPTKE---DGGDAG--NDNGDGGSEN 120
            DG  NENE N SDNDLGED+DVLENGEEE GKNAP KE    GGDAG  NDN DGGS+N
Sbjct: 61  VDGEGNENENNYSDNDLGEDEDVLENGEEE-GKNAPIKEGANGGGDAGNSNDNDDGGSDN 120

Query: 121 SDEGGDDEDDDGGTDENDKENNNDEEDVDEED---EEEDNFEGEEDEETLPPPKKRKK 166
           S +GGDD++DDGG+D+ND++NN D+EDVDE+D   EEEDNFEGEEDEETLPPPKKRKK
Sbjct: 121 SGDGGDDDNDDGGSDDNDEDNNEDDEDVDEDDADAEEEDNFEGEEDEETLPPPKKRKK 171

The following BLAST results are available for this feature:

BLAST of Lcy09g000600 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g000600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSW9	1.8e-39	68.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G403660 PE=4 SV=1	[more]
A0A6J1DGC0	4.1e-39	73.03	uncharacterized protein DDB_G0290685-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A1S3B301	3.5e-38	68.85	uncharacterized protein DDB_G0290685-like OS=Cucumis melo OX=3656 GN=LOC10348542...	[more]
A0A6J1FG81	5.6e-36	68.13	uncharacterized protein DDB_G0290685-like isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1FLT8	5.6e-36	68.13	uncharacterized protein DDB_G0290685-like isoform X2 OS=Cucurbita moschata OX=36...	[more]

BLAST of Lcy09g000600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885474.1	9.1e-41	69.89	uncharacterized protein DDB_G0290685-like isoform X1 [Benincasa hispida]	[more]
XP_038885476.1	9.1e-41	69.89	uncharacterized protein DDB_G0290685-like isoform X2 [Benincasa hispida] >XP_038...	[more]
XP_011649914.1	3.8e-39	68.82	uncharacterized protein DDB_G0290685 isoform X2 [Cucumis sativus] >KGN63111.1 hy...	[more]
XP_004138812.2	3.8e-39	68.82	uncharacterized protein DDB_G0290685 isoform X1 [Cucumis sativus]	[more]
XP_022152467.1	8.5e-39	73.03	uncharacterized protein DDB_G0290685-like [Momordica charantia] >XP_022152468.1 ...	[more]

BLAST of Lcy09g000600 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g000600.1	Lcy09g000600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane