Lcy09g000560 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g000560
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Trinucleotide repeat-containing gene 18 protein-like protein
Location	Chr09: 530194 .. 531540 (+)
RNA-Seq Expression	Lcy09g000560
Synteny	Lcy09g000560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTTGAAGTGGGTTTGTGTGATCCCAATTCCCGAATTCTCAAATTCCCAAATTCTGAAAAAAGAGAATGTGAAGAATCGCAGAGAAATAGAGACGATGTTTCAATCTTCTCGCCGGACTCATTCCTTCTCTTCTTCTTCTTCTTCTTCTTCACTTTCTTCTTCCTCCTCCTCCCGCGGTTCTTACTATTTTCCCGATGACTCTCCGCTCTCCGCCGCCGCCGCCGCCGCCACTCCGATCCGATCATTCTCCGGCAGCATTCCGTTTTCCTGGGAGCATTTGCCTGGAATCCCCAAGAAACAGTCTCCGGCGAGGCTCCGCCGAGACTCCGCCTCTCCTCTGACCTCTCTCCTCCCCTTGCCTCCCAATTCCACCACTCCGCCGTCCTCCAAGCGCTTCGGATTTCACGACTGGAGGAAATCGAACCGCCAAATTTCGCAGCGAGATCCTTTCTTCGACGCCTTCATCGAGTGCTCTAAAGAACCTTCCGCCGCCGCCGCCGCCGAGCAAGAGCCGGCCGCCGACCTCTGGAGCAGCGCCGGCGGCGGCAATGGCAAGGCGGTTTCGAGAAGCCTGAGCGACCGATTCGGATTCTTGAATCTGTACTCTTCTTGCAAACGGACCTGCGGCGTTTCGGAATCCATAGTGTATCTTCCGAGAACGCAGAGGAGTTCGTTCGATCTGCTAAACCACCGCACCGGCGGCTGAAAACGGCGCCGTATCCTCCGCCGCAGACCGCCGTTGTTGAAGGAGTTGAAAGCCAAAAAACAAAAGATAAGTGGCTTATTTGATTATATGTCTGTTTAGTTTTAATTAATATCTGTGTTTGTGCTGACTGATAATTCATGTGAGGTGTTTCCGAAGAGAATCAAGTGGGGAAGTTGAAAAATATTATGAATATGAAATGAATGGAGTTTGTTGATTACTGCGCTGGAATTGTTTGTGAATTACGTCAAATTTGAAGTTGAAAATTTCAGTCTCTTCTCTTTCTTTGTAGCTCTGTTTGTTATGCGTATTATTATTTCTCTATAATTGTTTTGCTCTGTAATGTTTTGTTTACATGTGACACCTCCCGACAATGTGTTTGTAATTTACGATATCTTCAATTTCCAAATGCTTTGGACCAATCTTTCTTTCTCTCTCTCTAAATCAACTCACAATATTGTATCAAGTTGTAATCCTTTTGGACCAATCTCTCTCGTAAAACCCACATTATCCATTTTTTACTCTCTTCCTCCCTCTCTCTCTAGTTTTGTCGATATTTAAGTCAAATAGGTTCTCGAACTTTTAAAAGTATTGGATAAGTATGTATAAATTTTTAATTTTGTGCCAATAGGGGTCTGAATT

mRNA sequence

AAGTTGAAGTGGGTTTGTGTGATCCCAATTCCCGAATTCTCAAATTCCCAAATTCTGAAAAAAGAGAATGTGAAGAATCGCAGAGAAATAGAGACGATGTTTCAATCTTCTCGCCGGACTCATTCCTTCTCTTCTTCTTCTTCTTCTTCTTCACTTTCTTCTTCCTCCTCCTCCCGCGGTTCTTACTATTTTCCCGATGACTCTCCGCTCTCCGCCGCCGCCGCCGCCGCCACTCCGATCCGATCATTCTCCGGCAGCATTCCGTTTTCCTGGGAGCATTTGCCTGGAATCCCCAAGAAACAGTCTCCGGCGAGGCTCCGCCGAGACTCCGCCTCTCCTCTGACCTCTCTCCTCCCCTTGCCTCCCAATTCCACCACTCCGCCGTCCTCCAAGCGCTTCGGATTTCACGACTGGAGGAAATCGAACCGCCAAATTTCGCAGCGAGATCCTTTCTTCGACGCCTTCATCGAGTGCTCTAAAGAACCTTCCGCCGCCGCCGCCGCCGAGCAAGAGCCGGCCGCCGACCTCTGGAGCAGCGCCGGCGGCGGCAATGGCAAGGCGGTTTCGAGAAGCCTGAGCGACCGATTCGGATTCTTGAATCTGTACTCTTCTTGCAAACGGACCTGCGGCGTTTCGGAATCCATAGTGTATCTTCCGAGAACGCAGAGGAGTTCGTTCGATCTGCTAAACCACCGCACCGGCGGCTGAAAACGGCGCCGTATCCTCCGCCGCAGACCGCCGTTGTTGAAGGAGTTGAAAGCCAAAAAACAAAAGATAAGTGGCTTATTTGATTATATGTCTGTTTAGTTTTAATTAATATCTGTGTTTGTGCTGACTGATAATTCATGTGAGGTGTTTCCGAAGAGAATCAAGTGGGGAAGTTGAAAAATATTATGAATATGAAATGAATGGAGTTTGTTGATTACTGCGCTGGAATTGTTTGTGAATTACGTCAAATTTGAAGTTGAAAATTTCAGTCTCTTCTCTTTCTTTGTAGCTCTGTTTGTTATGCGTATTATTATTTCTCTATAATTGTTTTGCTCTGTAATGTTTTGTTTACATGTGACACCTCCCGACAATGTGTTTGTAATTTACGATATCTTCAATTTCCAAATGCTTTGGACCAATCTTTCTTTCTCTCTCTCTAAATCAACTCACAATATTGTATCAAGTTGTAATCCTTTTGGACCAATCTCTCTCGTAAAACCCACATTATCCATTTTTTACTCTCTTCCTCCCTCTCTCTCTAGTTTTGTCGATATTTAAGTCAAATAGGTTCTCGAACTTTTAAAAGTATTGGATAAGTATGTATAAATTTTTAATTTTGTGCCAATAGGGGTCTGAATT

Coding sequence (CDS)

ATGTTTCAATCTTCTCGCCGGACTCATTCCTTCTCTTCTTCTTCTTCTTCTTCTTCACTTTCTTCTTCCTCCTCCTCCCGCGGTTCTTACTATTTTCCCGATGACTCTCCGCTCTCCGCCGCCGCCGCCGCCGCCACTCCGATCCGATCATTCTCCGGCAGCATTCCGTTTTCCTGGGAGCATTTGCCTGGAATCCCCAAGAAACAGTCTCCGGCGAGGCTCCGCCGAGACTCCGCCTCTCCTCTGACCTCTCTCCTCCCCTTGCCTCCCAATTCCACCACTCCGCCGTCCTCCAAGCGCTTCGGATTTCACGACTGGAGGAAATCGAACCGCCAAATTTCGCAGCGAGATCCTTTCTTCGACGCCTTCATCGAGTGCTCTAAAGAACCTTCCGCCGCCGCCGCCGCCGAGCAAGAGCCGGCCGCCGACCTCTGGAGCAGCGCCGGCGGCGGCAATGGCAAGGCGGTTTCGAGAAGCCTGAGCGACCGATTCGGATTCTTGAATCTGTACTCTTCTTGCAAACGGACCTGCGGCGTTTCGGAATCCATAGTGTATCTTCCGAGAACGCAGAGGAGTTCGTTCGATCTGCTAAACCACCGCACCGGCGGCTGA

Protein sequence

MFQSSRRTHSFSSSSSSSSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFSWEHLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLSDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

Homology

[Close]

BLAST of Lcy09g000560 vs. ExPASy TrEMBL
Match: A0A6J1GNZ5 (uncharacterized protein LOC111456137 OS=Cucurbita moschata OX=3662 GN=LOC111456137 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.3e-84
Identity = 176/203 (86.70%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSSSSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFSWE 60
           MFQSSRRT SFSSSS SSS SSSSSSRGSYYFPDDSPLS    AATPIRSFSGSIPFSWE
Sbjct: 1   MFQSSRRTRSFSSSSPSSSSSSSSSSRGSYYFPDDSPLS----AATPIRSFSGSIPFSWE 60

Query: 61  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFF 120
           +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQ SQRDPFF
Sbjct: 61  YLPGIPKKQSPARLRLDSASPLTSLLPLPPISTTLPSSKRFGFHDWRKSNRQNSQRDPFF 120

Query: 121 DAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLSDRFGFLNLYSSCKRTCGVS 180
           DAF+ECSKEPSAA AAEQ+P A+LW+S  G NGKAVSRSLSDRFGFLN  SSCKRTCGVS
Sbjct: 121 DAFVECSKEPSAATAAEQDPTAELWNS--GSNGKAVSRSLSDRFGFLNPNSSCKRTCGVS 180

Query: 181 ESIVYLPRTQRSSFDLLNHRTGG 204
           ESIVY PR  RSSFDLLNHR GG
Sbjct: 181 ESIVYRPRRGRSSFDLLNHRNGG 197

[Close]

BLAST of Lcy09g000560 vs. ExPASy TrEMBL
Match: A0A6J1JTM6 (uncharacterized protein LOC111487739 OS=Cucurbita maxima OX=3661 GN=LOC111487739 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.4e-83
Identity = 175/203 (86.21%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSSSSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFSWE 60
           MFQSSRRT SFSSSSSSSS SSSSSSRGSYYFPDDSPLS    AATPIRSFSGSIPFSWE
Sbjct: 1   MFQSSRRTRSFSSSSSSSS-SSSSSSRGSYYFPDDSPLS----AATPIRSFSGSIPFSWE 60

Query: 61  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFF 120
           +LPGIPKKQSPARLR DSASPLT LLPLPP ST  PSSKRFGFHDWRKSNRQ SQRDPFF
Sbjct: 61  YLPGIPKKQSPARLRLDSASPLTFLLPLPPISTALPSSKRFGFHDWRKSNRQNSQRDPFF 120

Query: 121 DAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLSDRFGFLNLYSSCKRTCGVS 180
           DAF+ECSKEPSAA AAEQ+P A+LW+S  G NGKAVSRSLSDRFGFLN YSSCKRTC VS
Sbjct: 121 DAFVECSKEPSAATAAEQDPTAELWNS--GSNGKAVSRSLSDRFGFLNPYSSCKRTCSVS 180

Query: 181 ESIVYLPRTQRSSFDLLNHRTGG 204
           ESIVY PR  RSSFDLLNHR+GG
Sbjct: 181 ESIVYRPRRGRSSFDLLNHRSGG 196

[Close]

BLAST of Lcy09g000560 vs. ExPASy TrEMBL
Match: A0A5D3C8I6 (Trinucleotide repeat-containing gene 18 protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001240 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76
Identity = 165/205 (80.49%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSS--SSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFS 60
           MFQSSRRTHSFSSSSS+  SS SSSSSSRGSYYFP +SP S   A+ATPIRSFSG+IPFS
Sbjct: 1   MFQSSRRTHSFSSSSSNSLSSSSSSSSSRGSYYFPGESPFS---ASATPIRSFSGNIPFS 60

Query: 61  WEHLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDP 120
           WEHLPGIPKKQSPARLRR SASPL+SLLPLPPNSTT  SSKRFGF DWRKSNRQ  QRDP
Sbjct: 61  WEHLPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTLSSSKRFGFQDWRKSNRQNPQRDP 120

Query: 121 FFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLSDRFGFLNLYSSCKRTCG 180
           FFDAF+ECSKEP+ AA       A+LWS  G  NGKA++RSLSDRFGFLNLYSSCKRTCG
Sbjct: 121 FFDAFLECSKEPTNAAV-----DAELWS--GASNGKAITRSLSDRFGFLNLYSSCKRTCG 180

Query: 181 VSESIVYLPRTQRSSFDLLNHRTGG 204
           VSESIVYLPRT  SSFDLLN R+GG
Sbjct: 181 VSESIVYLPRTPTSSFDLLNQRSGG 195

[Close]

BLAST of Lcy09g000560 vs. ExPASy TrEMBL
Match: A0A1S3B2H5 (uncharacterized protein LOC103485423 OS=Cucumis melo OX=3656 GN=LOC103485423 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76
Identity = 165/205 (80.49%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSS--SSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFS 60
           MFQSSRRTHSFSSSSS+  SS SSSSSSRGSYYFP +SP S   A+ATPIRSFSG+IPFS
Sbjct: 1   MFQSSRRTHSFSSSSSNSLSSSSSSSSSRGSYYFPGESPFS---ASATPIRSFSGNIPFS 60

Query: 61  WEHLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDP 120
           WEHLPGIPKKQSPARLRR SASPL+SLLPLPPNSTT  SSKRFGF DWRKSNRQ  QRDP
Sbjct: 61  WEHLPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTLSSSKRFGFQDWRKSNRQNPQRDP 120

Query: 121 FFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLSDRFGFLNLYSSCKRTCG 180
           FFDAF+ECSKEP+ AA       A+LWS  G  NGKA++RSLSDRFGFLNLYSSCKRTCG
Sbjct: 121 FFDAFLECSKEPTNAAV-----DAELWS--GASNGKAITRSLSDRFGFLNLYSSCKRTCG 180

Query: 181 VSESIVYLPRTQRSSFDLLNHRTGG 204
           VSESIVYLPRT  SSFDLLN R+GG
Sbjct: 181 VSESIVYLPRTPTSSFDLLNQRSGG 195

[Close]

BLAST of Lcy09g000560 vs. ExPASy TrEMBL
Match: A0A6J1DE38 (uncharacterized protein LOC111020211 OS=Momordica charantia OX=3673 GN=LOC111020211 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.8e-76
Identity = 164/199 (82.41%), Postives = 174/199 (87.44%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSSSSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFSWE 60
           MFQSSRRTHSF   SSSSSLSSSSSSRGSYYFPDDSPLS    +ATPIRSFSG+IPFSWE
Sbjct: 1   MFQSSRRTHSF---SSSSSLSSSSSSRGSYYFPDDSPLS----SATPIRSFSGAIPFSWE 60

Query: 61  HLPGIPKK-QSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPF 120
           HLPGIPKK QSPARLR+DSASPLTSLLPLPPNSTTPPSSKRFGF +WRKSNR  SQRDPF
Sbjct: 61  HLPGIPKKLQSPARLRQDSASPLTSLLPLPPNSTTPPSSKRFGFQEWRKSNRHNSQRDPF 120

Query: 121 FDAFIECSKEPSAAAAAEQEPAADLWSSAGGGN-GKAVSRSLSDRFGFLNLYSSCKRTCG 180
           FDAF+ECSK+ ++A       AA+LWS  GG N GKA+SRSLSDRFGFLNLYSSCKRTCG
Sbjct: 121 FDAFVECSKDRASA-------AAELWSGGGGSNGGKAISRSLSDRFGFLNLYSSCKRTCG 180

Query: 181 VSESIVYLPRTQRSSFDLL 198
           VSESIV LPRT RSSFDLL
Sbjct: 181 VSESIVCLPRTPRSSFDLL 185

[Close]

BLAST of Lcy09g000560 vs. NCBI nr
Match: KAG6602714.1 (hypothetical protein SDJN03_07947, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 325.1 bits (832), Expect = 4.3e-85
Identity = 177/203 (87.19%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSSSSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFSWE 60
           MFQSSRRT SFSSSSSSSS SSSSSSRGSYYFPDDSPLS    AATPIRSFSGSIPFSWE
Sbjct: 1   MFQSSRRTRSFSSSSSSSSSSSSSSSRGSYYFPDDSPLS----AATPIRSFSGSIPFSWE 60

Query: 61  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFF 120
           +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQ  QRDPFF
Sbjct: 61  YLPGIPKKQSPARLRLDSASPLTSLLPLPPISTTLPSSKRFGFHDWRKSNRQNPQRDPFF 120

Query: 121 DAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLSDRFGFLNLYSSCKRTCGVS 180
           DAF+ECSKEPSAA AAEQ+P A+LW+S  G NGKAVSRSLSDRFGFLN YSSCKRTCGVS
Sbjct: 121 DAFVECSKEPSAATAAEQDPTAELWNS--GSNGKAVSRSLSDRFGFLNPYSSCKRTCGVS 180

Query: 181 ESIVYLPRTQRSSFDLLNHRTGG 204
           ESIVY PR  RSSFDLLNHR GG
Sbjct: 181 ESIVYRPRRGRSSFDLLNHRNGG 197

[Close]

BLAST of Lcy09g000560 vs. NCBI nr
Match: XP_038885392.1 (uncharacterized protein LOC120075791 [Benincasa hispida])

HSP 1 Score: 322.0 bits (824), Expect = 3.7e-84
Identity = 172/203 (84.73%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSSSSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFSWE 60
           MFQSSRRTHSFSSSSS+S  SSSSSSRGSYYFPD+SP S    AATPIRSFSGSIPFSWE
Sbjct: 1   MFQSSRRTHSFSSSSSNSLSSSSSSSRGSYYFPDESPFS---TAATPIRSFSGSIPFSWE 60

Query: 61  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFF 120
           HLPGIPKKQSPARLRR SASPL+SLLPLPPNS TPPSSKRFGF DWRKSNRQ SQRDPFF
Sbjct: 61  HLPGIPKKQSPARLRRGSASPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFF 120

Query: 121 DAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLSDRFGFLNLYSSCKRTCGVS 180
           DAF+ECSKEPS AAA +    A+LWS  GG NGKA++RSLSDRFGFLNLYSSCKRTCGVS
Sbjct: 121 DAFLECSKEPSTAAAVD----AELWSGGGGSNGKAITRSLSDRFGFLNLYSSCKRTCGVS 180

Query: 181 ESIVYLPRTQRSSFDLLNHRTGG 204
           ESIVYLPRT RSSFDLLN R+GG
Sbjct: 181 ESIVYLPRTPRSSFDLLNQRSGG 196

[Close]

BLAST of Lcy09g000560 vs. NCBI nr
Match: XP_022953683.1 (uncharacterized protein LOC111456137 [Cucurbita moschata])

HSP 1 Score: 321.6 bits (823), Expect = 4.8e-84
Identity = 176/203 (86.70%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSSSSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFSWE 60
           MFQSSRRT SFSSSS SSS SSSSSSRGSYYFPDDSPLS    AATPIRSFSGSIPFSWE
Sbjct: 1   MFQSSRRTRSFSSSSPSSSSSSSSSSRGSYYFPDDSPLS----AATPIRSFSGSIPFSWE 60

Query: 61  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFF 120
           +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQ SQRDPFF
Sbjct: 61  YLPGIPKKQSPARLRLDSASPLTSLLPLPPISTTLPSSKRFGFHDWRKSNRQNSQRDPFF 120

Query: 121 DAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLSDRFGFLNLYSSCKRTCGVS 180
           DAF+ECSKEPSAA AAEQ+P A+LW+S  G NGKAVSRSLSDRFGFLN  SSCKRTCGVS
Sbjct: 121 DAFVECSKEPSAATAAEQDPTAELWNS--GSNGKAVSRSLSDRFGFLNPNSSCKRTCGVS 180

Query: 181 ESIVYLPRTQRSSFDLLNHRTGG 204
           ESIVY PR  RSSFDLLNHR GG
Sbjct: 181 ESIVYRPRRGRSSFDLLNHRNGG 197

[Close]

BLAST of Lcy09g000560 vs. NCBI nr
Match: KAG7033401.1 (hypothetical protein SDJN02_07457, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.9 bits (821), Expect = 8.2e-84
Identity = 177/203 (87.19%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSSSSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFSWE 60
           MFQSSRRT SFSSSSSSSS SSSSSSRGSYYFPDDSPLS    AATPIRSFSGSIPFSWE
Sbjct: 1   MFQSSRRTRSFSSSSSSSS-SSSSSSRGSYYFPDDSPLS----AATPIRSFSGSIPFSWE 60

Query: 61  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFF 120
           +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQ  QRDPFF
Sbjct: 61  YLPGIPKKQSPARLRLDSASPLTSLLPLPPISTTLPSSKRFGFHDWRKSNRQNPQRDPFF 120

Query: 121 DAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLSDRFGFLNLYSSCKRTCGVS 180
           DAF+ECSKEPSAA AAEQ+P A+LW+S  G NGKAVSRSLSDRFGFLN YSSCKRTCGVS
Sbjct: 121 DAFVECSKEPSAATAAEQDPTAELWNS--GSNGKAVSRSLSDRFGFLNPYSSCKRTCGVS 180

Query: 181 ESIVYLPRTQRSSFDLLNHRTGG 204
           ESIVY PR  RSSFDLLNHR GG
Sbjct: 181 ESIVYRPRRGRSSFDLLNHRNGG 196

[Close]

BLAST of Lcy09g000560 vs. NCBI nr
Match: XP_023528120.1 (uncharacterized protein LOC111791129 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.7 bits (818), Expect = 1.8e-83
Identity = 177/205 (86.34%), Postives = 182/205 (88.78%), Query Frame = 0


Query: 1   MFQSSRRTHSF--SSSSSSSSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFS 60
           MFQSSRRT SF  SSSSSSSS SSSSSSRGSYYFPDDSPLS    AATPIRSFSGSIPFS
Sbjct: 1   MFQSSRRTRSFSSSSSSSSSSSSSSSSSRGSYYFPDDSPLS----AATPIRSFSGSIPFS 60

Query: 61  WEHLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDP 120
           WE+LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQ SQRDP
Sbjct: 61  WEYLPGIPKKQSPARLRLDSASPLTSLLPLPPISTTLPSSKRFGFHDWRKSNRQNSQRDP 120

Query: 121 FFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLSDRFGFLNLYSSCKRTCG 180
           FFDAF+ECSKEPSAA AAEQ+P A+LW+S  G NGKAVSRSLSDR GFLN YSSCKRTCG
Sbjct: 121 FFDAFVECSKEPSAATAAEQDPTAELWNS--GSNGKAVSRSLSDRLGFLNPYSSCKRTCG 180

Query: 181 VSESIVYLPRTQRSSFDLLNHRTGG 204
           VSESIVY PR  RSSFDLLNHR GG
Sbjct: 181 VSESIVYRPRRGRSSFDLLNHRNGG 199

[Close]

BLAST of Lcy09g000560 vs. TAIR 10
Match: AT1G71970.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22680.1); Has 58 Blast hits to 58 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-23
Identity = 89/204 (43.63%), Postives = 118/204 (57.84%), Query Frame = 0


Query: 4   SSRRTHSFSSSSSSSSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFSWEHLP 63
           SSRR  S SSSSS SS SS SSS  S  FP DSPL+   + ATP+R     +PFSWE LP
Sbjct: 25  SSRR--SLSSSSSFSSFSSCSSS--SLVFPGDSPLN---SPATPLRLL--GVPFSWEQLP 84

Query: 64  GIPKKQSPARLRRDSASPLTSLLPLPP--NSTTPPSSKRFGFHDWRKSNR-QISQRDPFF 123
           G PK  S     R +      LLPLPP  N + P + K+   ++  K N   ++ +DPF 
Sbjct: 85  GKPKDYSHRLNNRRNNESSNLLLPLPPHRNISFPATGKKPKPNNSSKKNSFPVTGKDPFA 144

Query: 124 DAFIECSKEPSAAAAAEQ-----EPAADLWSSAGGGNGKAVSR-SLSDRFGFLNLYSSCK 183
            A +ECSK+    +  +      E     +    GG+ K +S+ S+ DRFG +NLY SC+
Sbjct: 145 AALLECSKDEGTNSDNDDDVDGVEDVDRRFRGNSGGSSKVLSKNSIGDRFGLVNLYGSCR 204

Query: 184 RTCGVSESIVYLPRTQR-SSFDLL 198
           RTC V+ESIVYLPR ++ +S+D L
Sbjct: 205 RTCAVTESIVYLPRARKAASYDNL 219

[Close]

BLAST of Lcy09g000560 vs. TAIR 10
Match: AT1G22680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71970.1); Has 44 Blast hits to 44 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.7 bits (208), Expect = 9.2e-17
Identity = 80/202 (39.60%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 5   SRRTHSFSSSSS---SSSLSSSSSSRGSYYFPDDSPLSAAAAAATPIRSFSGSIPFSWEH 64
           +RR++S   SS+   S+  S SSSS  S  F  +SP       ATP+      IPFSWE 
Sbjct: 12  TRRSNSVKFSSTVNISTRRSLSSSSSNSLLFSGNSP-------ATPLHPL--GIPFSWEK 71

Query: 65  LPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFD 124
           LPG PK+ S  R        L++LLPLPP+ +    + R      +K+    + RDPF  
Sbjct: 72  LPGKPKEFSYHRKNES----LSNLLPLPPHWSNHSPNTR-----CKKNTSPAAMRDPFMA 131

Query: 125 AFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLSDRFGFLNLYSSCKRTCGVSE 184
           A +ECSK     A  + E         GG + K + +S S   G LNLYSSC+R C VSE
Sbjct: 132 ALVECSK----GATTDGE-------HTGGESRKVLRKSRS--IGLLNLYSSCRRACEVSE 181

Query: 185 SIVYLPRTQRSSFDLLNHRTGG 204
           SIVYLP++  +S+D L+  T G
Sbjct: 192 SIVYLPKS-IASYDHLHLSTRG 181

The following BLAST results are available for this feature:

BLAST of Lcy09g000560 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g000560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNZ5	2.3e-84	86.70	uncharacterized protein LOC111456137 OS=Cucurbita moschata OX=3662 GN=LOC1114561...	[more]
A0A6J1JTM6	7.4e-83	86.21	uncharacterized protein LOC111487739 OS=Cucurbita maxima OX=3661 GN=LOC111487739...	[more]
A0A5D3C8I6	2.3e-76	80.49	Trinucleotide repeat-containing gene 18 protein-like protein OS=Cucumis melo var...	[more]
A0A1S3B2H5	2.3e-76	80.49	uncharacterized protein LOC103485423 OS=Cucumis melo OX=3656 GN=LOC103485423 PE=...	[more]
A0A6J1DE38	8.8e-76	82.41	uncharacterized protein LOC111020211 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Lcy09g000560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602714.1	4.3e-85	87.19	hypothetical protein SDJN03_07947, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038885392.1	3.7e-84	84.73	uncharacterized protein LOC120075791 [Benincasa hispida]	[more]
XP_022953683.1	4.8e-84	86.70	uncharacterized protein LOC111456137 [Cucurbita moschata]	[more]
KAG7033401.1	8.2e-84	87.19	hypothetical protein SDJN02_07457, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023528120.1	1.8e-83	86.34	uncharacterized protein LOC111791129 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy09g000560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71970.1	1.7e-23	43.63	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G22680.1	9.2e-17	39.60	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007789	Protein of unknown function DUF688	PFAM	PF05097	DUF688	coord: 3..100 e-value: 4.3E-5 score: 22.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR33696	T22J18.15-RELATED	coord: 3..192
None	No IPR available	PANTHER	PTHR33696:SF1	T22J18.15	coord: 3..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g000560.1	Lcy09g000560.1	mRNA