Lcy09g000130 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g000130
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CCHC-type domain-containing protein
Location	Chr09: 131829 .. 133222 (-)
RNA-Seq Expression	Lcy09g000130
Synteny	Lcy09g000130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTACACGTTACCATTACCAACCCATCAAATCATGTCCACAACTAACTTAATATAATAGAAAATTCGCTCTCTCTGGTTTTCCATGAGAGTTTTTCTCTAGGCTTTGGCCGGTATCCCTTCTCTCCTTTGGTGTAGAAGTTTTTCTCAATCAAGCTATCATGGATATCGTCGACAAGTTGGATCAGATGAGTCTTAGTGCGAAGGAATCAAATACAATCAAACTAGACGAAATCGGTAAAGGAAAAGTGAAAGAGAATGTTCAACACTGTTTGATTGGAAAGGTTATATCCAATAAAACAGTGAATGTGGAGGCGTTCAAAAGAGTTATGCGAAAGGCCTGGTCGTTTTGTCGTGGAATTGCAATTGAAAGCGCAGGTGATAATCTGTTCATGATAAAGCTGGGAGCGGAACAAGACCGTATGAGAATTCAATCTGGGGGGCCATGGTGTTTTGACAGATCGATAGTTCTATTGGAATCACCTAGCTCCGTGGATATACCAGAAAAAATGAAGTTTGAAAAGGCGACGTTCTGGATCCAATTCCATAATGTTCCTGTAGCTTACAGAACCGAACAAACGGCAAGAATTCTGGGTAGCAGAGTTGGGAAGGTTCTAAATATTGGCACAAATGATGCTGATGAATGCTGGGGAAGATTTCTAAGGGTGCGAGTCCAGGTGAATGTCGCAGAGCCTTTATGCAGATGTCTATCAATCACAGTAGAGGGTTCAAAACAAGTGTGGGTCACAATAAGGTATGAACGTCTACCAGATTTTTGTTATCATTGTGGTTTAATTGGCCATGTAGCAGCAGAATGTTCAGAGGAAGAAAAAGAAGAAAGCTATGAATCGGGACATCAAACGGAGCTAAAACCTTTCGGACCATGGATGAAAGCTGATGAATTCTTTAGCTGGTACCGTCAAGGAGGCCGTCGACCAGATGGGGGCAGAGGGAGAGGGAGAGGTAGAGATACTGATGTGTTTCAACATCCGCTGGAGGAACATGAGTCTCACTCCTCCCATGACACTAGCCGAACAGGAAACAGAAGCTTGCAAGACAGAGTTGAAACAAAAAAGGAAGATGAGCAGAACGAATCGGTGGTGCAACCGGAAAACAATCAGTCCAAGCACCAACCGATTGGAGAAGCGCCGATAACAGACGAAATTGCTACGGCGGCGGACGGTGAAGCACAGAGCATCAATGGCAGGCGAGAGATGAGCGGAAATCATGGGGGAATTAATGATGAAATTAATGCAGAGAAGCTAAATACGGATACTAAATCGGTGCAACAAACGGCTCACAATAATAATGAGGAAGGAAATTTCATAACAGCTCCATTTGCCACGCAAGAGATGGAGATTGATGCTGATTTCAAGGAAAAAAAAATTAAGTTATAA

mRNA sequence

GTACACGTTACCATTACCAACCCATCAAATCATGTCCACAACTAACTTAATATAATAGAAAATTCGCTCTCTCTGGTTTTCCATGAGAGTTTTTCTCTAGGCTTTGGCCGGTATCCCTTCTCTCCTTTGGTGTAGAAGTTTTTCTCAATCAAGCTATCATGGATATCGTCGACAAGTTGGATCAGATGAGTCTTAGTGCGAAGGAATCAAATACAATCAAACTAGACGAAATCGGTAAAGGAAAAGTGAAAGAGAATGTTCAACACTGTTTGATTGGAAAGGTTATATCCAATAAAACAGTGAATGTGGAGGCGTTCAAAAGAGTTATGCGAAAGGCCTGGTCGTTTTGTCGTGGAATTGCAATTGAAAGCGCAGGTGATAATCTGTTCATGATAAAGCTGGGAGCGGAACAAGACCGTATGAGAATTCAATCTGGGGGGCCATGGTGTTTTGACAGATCGATAGTTCTATTGGAATCACCTAGCTCCGTGGATATACCAGAAAAAATGAAGTTTGAAAAGGCGACGTTCTGGATCCAATTCCATAATGTTCCTGTAGCTTACAGAACCGAACAAACGGCAAGAATTCTGGGTAGCAGAGTTGGGAAGGTTCTAAATATTGGCACAAATGATGCTGATGAATGCTGGGGAAGATTTCTAAGGGTGCGAGTCCAGGTGAATGTCGCAGAGCCTTTATGCAGATGTCTATCAATCACAGTAGAGGGTTCAAAACAAGTGTGGGTCACAATAAGGTATGAACGTCTACCAGATTTTTGTTATCATTGTGGTTTAATTGGCCATGTAGCAGCAGAATGTTCAGAGGAAGAAAAAGAAGAAAGCTATGAATCGGGACATCAAACGGAGCTAAAACCTTTCGGACCATGGATGAAAGCTGATGAATTCTTTAGCTGGTACCGTCAAGGAGGCCGTCGACCAGATGGGGGCAGAGGGAGAGGGAGAGGTAGAGATACTGATGTGTTTCAACATCCGCTGGAGGAACATGAGTCTCACTCCTCCCATGACACTAGCCGAACAGGAAACAGAAGCTTGCAAGACAGAGTTGAAACAAAAAAGGAAGATGAGCAGAACGAATCGGTGGTGCAACCGGAAAACAATCAGTCCAAGCACCAACCGATTGGAGAAGCGCCGATAACAGACGAAATTGCTACGGCGGCGGACGGTGAAGCACAGAGCATCAATGGCAGGCGAGAGATGAGCGGAAATCATGGGGGAATTAATGATGAAATTAATGCAGAGAAGCTAAATACGGATACTAAATCGGTGCAACAAACGGCTCACAATAATAATGAGGAAGGAAATTTCATAACAGCTCCATTTGCCACGCAAGAGATGGAGATTGATGCTGATTTCAAGGAAAAAAAAATTAAGTTATAA

Coding sequence (CDS)

ATGGATATCGTCGACAAGTTGGATCAGATGAGTCTTAGTGCGAAGGAATCAAATACAATCAAACTAGACGAAATCGGTAAAGGAAAAGTGAAAGAGAATGTTCAACACTGTTTGATTGGAAAGGTTATATCCAATAAAACAGTGAATGTGGAGGCGTTCAAAAGAGTTATGCGAAAGGCCTGGTCGTTTTGTCGTGGAATTGCAATTGAAAGCGCAGGTGATAATCTGTTCATGATAAAGCTGGGAGCGGAACAAGACCGTATGAGAATTCAATCTGGGGGGCCATGGTGTTTTGACAGATCGATAGTTCTATTGGAATCACCTAGCTCCGTGGATATACCAGAAAAAATGAAGTTTGAAAAGGCGACGTTCTGGATCCAATTCCATAATGTTCCTGTAGCTTACAGAACCGAACAAACGGCAAGAATTCTGGGTAGCAGAGTTGGGAAGGTTCTAAATATTGGCACAAATGATGCTGATGAATGCTGGGGAAGATTTCTAAGGGTGCGAGTCCAGGTGAATGTCGCAGAGCCTTTATGCAGATGTCTATCAATCACAGTAGAGGGTTCAAAACAAGTGTGGGTCACAATAAGGTATGAACGTCTACCAGATTTTTGTTATCATTGTGGTTTAATTGGCCATGTAGCAGCAGAATGTTCAGAGGAAGAAAAAGAAGAAAGCTATGAATCGGGACATCAAACGGAGCTAAAACCTTTCGGACCATGGATGAAAGCTGATGAATTCTTTAGCTGGTACCGTCAAGGAGGCCGTCGACCAGATGGGGGCAGAGGGAGAGGGAGAGGTAGAGATACTGATGTGTTTCAACATCCGCTGGAGGAACATGAGTCTCACTCCTCCCATGACACTAGCCGAACAGGAAACAGAAGCTTGCAAGACAGAGTTGAAACAAAAAAGGAAGATGAGCAGAACGAATCGGTGGTGCAACCGGAAAACAATCAGTCCAAGCACCAACCGATTGGAGAAGCGCCGATAACAGACGAAATTGCTACGGCGGCGGACGGTGAAGCACAGAGCATCAATGGCAGGCGAGAGATGAGCGGAAATCATGGGGGAATTAATGATGAAATTAATGCAGAGAAGCTAAATACGGATACTAAATCGGTGCAACAAACGGCTCACAATAATAATGAGGAAGGAAATTTCATAACAGCTCCATTTGCCACGCAAGAGATGGAGATTGATGCTGATTTCAAGGAAAAAAAAATTAAGTTATAA

Protein sequence

MDIVDKLDQMSLSAKESNTIKLDEIGKGKVKENVQHCLIGKVISNKTVNVEAFKRVMRKAWSFCRGIAIESAGDNLFMIKLGAEQDRMRIQSGGPWCFDRSIVLLESPSSVDIPEKMKFEKATFWIQFHNVPVAYRTEQTARILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLCRCLSITVEGSKQVWVTIRYERLPDFCYHCGLIGHVAAECSEEEKEESYESGHQTELKPFGPWMKADEFFSWYRQGGRRPDGGRGRGRGRDTDVFQHPLEEHESHSSHDTSRTGNRSLQDRVETKKEDEQNESVVQPENNQSKHQPIGEAPITDEIATAADGEAQSINGRREMSGNHGGINDEINAEKLNTDTKSVQQTAHNNNEEGNFITAPFATQEMEIDADFKEKKIKL

Homology

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BLAST of Lcy09g000130 vs. ExPASy Swiss-Prot
Match: O04244 (Uncharacterized protein At4g02000 OS=Arabidopsis thaliana OX=3702 GN=At4g02000 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.9e-06
Identity = 26/110 (23.64%), Postives = 51/110 (46.36%), Query Frame = 0


Query: 125 WIQFHNVPVAYRTEQTARILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLCRCLS 184
           W+Q   +P+ Y  E+TA  +   +GK+L +  +D+      ++RVR++  + + L     
Sbjct: 44  WVQMRGIPLLYVCEETALEIAHELGKILTLDFHDSTTTQIAYIRVRIRFGITDRLRFFQR 103

Query: 185 ITVEGSKQVWVTIRYERLPDFCYHCGLIGHVAAECSEEEKEESYESGHQT 235
           I  +  +   ++ +YERL   C  C  + H    C   + E  +   + T
Sbjct: 104 IIFDFGEAALISFQYERLRRICSSCFRMTHHRNSCPYRQIEPLHRVTNST 153

[Close]

BLAST of Lcy09g000130 vs. ExPASy TrEMBL
Match: A0A5E4G034 (PREDICTED: DUF4283 domain-containing OS=Prunus dulcis OX=3755 GN=ALMOND_2B021569 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.5e-45
Identity = 116/354 (32.77%), Postives = 189/354 (53.39%), Query Frame = 0


Query: 2   DIVDKLDQ-MSLSAKESNTIKLDEIGKGKVKENVQHCLIGKVISNKTVNVEAFKRVMRKA 61
           ++++ L++ + L+  E + I++ +     V E ++  L+GKV++    N EAFK+ M K 
Sbjct: 3   EVINSLEKTLILTEDERDAIQVRQNDIDDVGERLKMSLVGKVLTTTAFNREAFKQTMLKI 62

Query: 62  WSFCRGIAIESAGDNLFMIKLGAEQDRMRIQSGGPWCFDRSIVLLESPSSVDIPEKMKFE 121
           WS  R + ++  G+NLF+     E DR+R+   GPW FD+++VLLE+P     P KM  +
Sbjct: 63  WSTVREVVVKDIGENLFLFIFATEGDRLRVLRSGPWNFDKALVLLETPDGSIAPSKMLLK 122

Query: 122 KATFWIQFHNVPVAYRTEQTARILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLC 181
            A FWIQ HNVP++  +    R +G+  G+ L++      +C GRFLR+RV V+V++PL 
Sbjct: 123 YADFWIQVHNVPLSCMSTNLGRQIGNSFGRCLDVIEGMDGKCLGRFLRLRVSVDVSKPLR 182

Query: 182 RCLSITVEGSKQVWVTIRYERLPDFCYHCGLIGHVAAECSEEEKEESYESGHQTELKPFG 241
           R   +T+     V+V  RYERLP+FC+ CG +GHV  ECS  +     ++  Q + KP+G
Sbjct: 183 RGKKMTLPSGNTVFVEFRYERLPEFCFCCGRLGHVFKECSFVD-----QAAKQADEKPYG 242

Query: 242 PWMKADEFFSWYRQGG-RRPDGGRGRGRGRDTDVFQHPLEEHESHSSHDTSRTGNRSL-- 301
            W+KA + F   R G  +R +G      G      +  +E  +S+SS +     +  L  
Sbjct: 243 SWLKATKDFHSIRAGNPKRTNGSGSEAEGDGAKEKEMEVEGQQSNSSGEKVAESSLGLLS 302

Query: 302 -----QDRVETKKEDEQNESVVQPENNQSKHQPIGEAPITDEIATAADGEAQSI 347
                + R   ++ D +  + V P NN       G +    ++AT+ D   Q I
Sbjct: 303 KQRVGERRQPPREADREAVAGVGPANNGGS----GHSQNIIDVATSQDPANQVI 347

[Close]

BLAST of Lcy09g000130 vs. ExPASy TrEMBL
Match: A0A5C7HBM7 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019557 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.6e-45
Identity = 88/245 (35.92%), Postives = 148/245 (60.41%), Query Frame = 0


Query: 2   DIVDKLDQMSLSAKESNTIKLDEIGKGKVKENVQHCLIGKVISNKTVNVEAFKRVMRKAW 61
           +I    + +S+  ++    ++ E      +E+V HCL+GK++S + VN EAF+ V+   W
Sbjct: 5   EIAKLCENLSIKDEDGEIHQISEEVGRVGEEDVNHCLVGKILSGRRVNREAFRMVIESLW 64

Query: 62  SFCRGIAIESAGDNLFMIKLGAEQDRMRIQSGGPWCFDRSIVLLESPSSVDIPEKMKFEK 121
           S    + IE   +N+F+      +DR ++   GPW FD+ +++LE P       K+KF K
Sbjct: 65  SPFGNVDIEMVSENVFLFFFNKPEDRNKVWDRGPWHFDKCLLVLEKPEGTGEISKLKFNK 124

Query: 122 ATFWIQFHNVPVAYRTEQTARILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLCR 181
           A FWIQ H++P+     +TA+ L  ++G+V+ I T D+ +CWG+FLRV+V++++++PL R
Sbjct: 125 ADFWIQIHDIPIMCMNRRTAKWLAEQIGEVIEIPT-DSRDCWGKFLRVKVRIDISKPLKR 184

Query: 182 CLSITVEGSKQVWVT-IRYERLPDFCYHCGLIGHVAAECSEEEKEESYESGHQTELKPFG 241
            L + ++ S  + V  ++YERLP+FCY CG +GH  +EC + E ++    G       FG
Sbjct: 185 WLRLGLDRSGNIVVVGLKYERLPEFCYACGWLGHGISECPDTEAKKEAMEGATLR---FG 244

Query: 242 PWMKA 246
           PWM+A
Sbjct: 245 PWMRA 245

[Close]

BLAST of Lcy09g000130 vs. ExPASy TrEMBL
Match: A0A5C7HUW5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015258 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.1e-44
Identity = 96/280 (34.29%), Postives = 158/280 (56.43%), Query Frame = 0


Query: 27  KGKVKENVQHCLIGKVISNKTVNVEAFKRVMRKAWSFCRGIAIESAGDNLFMIKLGAEQD 86
           K +  ++V HCL+GKV++ K VN EAFK+V+ + WS    + IE+ GDN FM    + + 
Sbjct: 30  KSEGLKDVDHCLVGKVLAGKRVNREAFKKVIEQLWSPIGSVEIEAVGDNTFMFFFPSLEV 89

Query: 87  RMRIQSGGPWCFDRSIVLLESPSSVDIPEKMKFEKATFWIQFHNVPVAYRTEQTARILGS 146
           R  I S GPW FDR++++LE P+      K+ F    FW+Q HN+P+     + AR L  
Sbjct: 90  RSLIWSRGPWHFDRNLIVLEKPTGTGDISKLSFHMVEFWVQIHNLPLMCMNRRMARYLAE 149

Query: 147 RVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLCRCLSITVEGSKQVWVTI-RYERLPDF 206
           ++G V+ + T D+ ECWGRF+RV+V++++++PL RCL + ++ S +V   I  YERLP+F
Sbjct: 150 QIGTVVELPT-DSRECWGRFIRVKVRIDISKPLLRCLRLNLDDSGEVTTAILLYERLPEF 209

Query: 207 CYHCGLIGHVAAECSEEEKEESYESGHQTELKPFGPWMKADEFFSWYRQGGRRPDGGRGR 266
           CY CG+IGH   +C +++       G  T+   +G W++A            +      R
Sbjct: 210 CYACGIIGHGLRDCPDDDARLEALEGVSTK---YGSWLRAASV--------EQSKNRNSR 269

Query: 267 GRGRDTDVFQHPLEEHESHSSHDTSRTGNRSLQDRVETKK 306
              +  D+     +E+++  + DT+R   +   D   T++
Sbjct: 270 NEKKPDDIPPSSYQENQTAKNSDTNRQSEQYSIDHERTQQ 297

[Close]

BLAST of Lcy09g000130 vs. ExPASy TrEMBL
Match: A0A5C7IJL3 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004194 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.8e-44
Identity = 89/225 (39.56%), Postives = 144/225 (64.00%), Query Frame = 0


Query: 23  DEIGKGKVKENVQHCLIGKVISNKTVNVEAFKRVMRKAWSFCRGIAIESAGDNLFMIKLG 82
           +++G+  V ++V HCL+GKV+S K VN EAF  V+   W+    + IES G+N+FM    
Sbjct: 105 EDVGEEGV-QDVDHCLVGKVLSGKRVNREAFISVIEHLWNPFGKVEIESVGENVFMFHFQ 164

Query: 83  AEQDRMRIQSGGPWCFDRSIVLLESPSSVDIPEKMKFEKATFWIQFHNVPVAYRTEQTAR 142
             +DR R+   GPW FD+S+++LE P       K++F KA FW+Q H++P+     ++A+
Sbjct: 165 NPEDRSRVWQRGPWHFDKSLIVLEMPEGTGEIAKLRFNKADFWVQIHDIPIMCMNRRSAK 224

Query: 143 ILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLCRCLSITVEGSKQVWVT-IRYER 202
            L  ++G+V+ I +   D CWG+FLRV+V+++++ PL R L ++++ S  V V  ++YER
Sbjct: 225 WLAEQIGEVIEIPSESRD-CWGKFLRVKVRIDISRPLKRWLRLSLDKSGNVVVVGLKYER 284

Query: 203 LPDFCYHCGLIGHVAAECSE-EEKEESYESGHQTELKPFGPWMKA 246
           +P+FC+ CG +GH   ECS+ E K+E+ E  +      FG WM+A
Sbjct: 285 MPEFCFACGRVGHGINECSDIEAKKEAMEGNNPR----FGLWMRA 323

[Close]

BLAST of Lcy09g000130 vs. ExPASy TrEMBL
Match: A0A5C7HT01 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_014744 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.8e-44
Identity = 94/245 (38.37%), Postives = 146/245 (59.59%), Query Frame = 0


Query: 2   DIVDKLDQMSLSAKESNTIKLDEIGKGKVKENVQHCLIGKVISNKTVNVEAFKRVMRKAW 61
           DI    + +SL+ ++    ++ E  +     +V HCL+GKV+S K VN+EAFK ++ + W
Sbjct: 4   DIAKLYENLSLADEDVGIHEMSEEVQRDGVADVNHCLVGKVLSGKKVNIEAFKGLIEQLW 63

Query: 62  SFCRGIAIESAGDNLFMIKLGAEQDRMRIQSGGPWCFDRSIVLLESPSSVDIPEKMKFEK 121
           +    + IES GDN+FM      +DR RI   G W FD+S++ LE P S+     + F K
Sbjct: 64  NQFGVVEIESLGDNIFMFHFNNPEDRNRIWQRGLWYFDKSLIALEKPRSLGEISLLGFNK 123

Query: 122 ATFWIQFHNVPVAYRTEQTARILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLCR 181
              W+Q H+VP+     +TA+ L  ++G V+ I T ++ ECWG+F+RV+V + +++PL R
Sbjct: 124 VELWVQIHDVPIMCMNRRTAKWLAEQLGGVIEIPT-ESKECWGKFMRVKVLIEISKPLKR 183

Query: 182 CLSITVEGSKQ-VWVTIRYERLPDFCYHCGLIGHVAAECSEEEKEESYESGHQTELKPFG 241
            L + ++ S   V V ++YERLP+FCY CG IGHV  +C + E      +G  T+   FG
Sbjct: 184 WLRLKLDKSDNIVLVGLKYERLPEFCYACGKIGHVIKDCLDAEARSLALTGTTTK---FG 243

Query: 242 PWMKA 246
            WM+A
Sbjct: 244 SWMRA 244

[Close]

BLAST of Lcy09g000130 vs. NCBI nr
Match: XP_024035600.1 (uncharacterized protein LOC112096408 [Citrus clementina])

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-46
Identity = 89/244 (36.48%), Postives = 144/244 (59.02%), Query Frame = 0


Query: 2   DIVDKLDQMSLSAKESNTIKLDEIGKGKVKENVQHCLIGKVISNKTVNVEAFKRVMRKAW 61
           +++ K + ++L ++E N I      K + +  V HCL+GK++  ++V  E  +  M++AW
Sbjct: 21  ELIRKCEAITLQSEEDNIISFGRNMKVRGERLVAHCLVGKILQTRSVPREGLRAAMQQAW 80

Query: 62  SFCRGIAIESAGDNLFMIKLGAEQDRMRIQSGGPWCFDRSIVLLESPSSVDIPEKMKFEK 121
              +   +ES GDN+F+ K  +E ++ RI  GGPW FDRS++++  P  +   +K  F  
Sbjct: 81  RTTKETKVESLGDNIFLFKFASESEKKRILFGGPWHFDRSLMVVTEPMGIGDVKKQDFTH 140

Query: 122 ATFWIQFHNVPVAYRTEQTARILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLCR 181
           A FW+Q HN+P+    ++  + +G R+GKV  + T+DA EC G F+RVR+ VNV  PL +
Sbjct: 141 ALFWVQIHNIPIMCMDKEIIQEIGGRIGKVQEVETDDAGECMGSFVRVRIMVNVTRPLPK 200

Query: 182 CLSITVEGSKQVWVTIRYERLPDFCYHCGLIGHVAAECSEEEKEESYESGHQTELKPFGP 241
            L + +E   Q+ + I YE+LPDFC+ CGLIGH   EC + +       G   +   +G 
Sbjct: 201 RLLLKLEDRGQISLRIAYEKLPDFCFCCGLIGHQYRECLDYK-------GQSKDDLTYGA 257

Query: 242 WMKA 246
           WM+A
Sbjct: 261 WMRA 257

[Close]

BLAST of Lcy09g000130 vs. NCBI nr
Match: XP_006485824.1 (uncharacterized protein LOC102613298 [Citrus sinensis])

HSP 1 Score: 196.8 bits (499), Expect = 3.6e-46
Identity = 94/263 (35.74%), Postives = 150/263 (57.03%), Query Frame = 0


Query: 2   DIVDKLDQMSLSAKESNTIKLDEIGKGKVKENVQHCLIGKVISNKTVNVEAFKRVMRKAW 61
           +++ K + ++L ++E N I      K + +  V HCL+GK++  ++V  E  +  M++AW
Sbjct: 5   ELIRKCEAITLQSEEDNMISFGRNMKVRGERLVAHCLVGKILQTRSVPREGLRAAMQQAW 64

Query: 62  SFCRGIAIESAGDNLFMIKLGAEQDRMRIQSGGPWCFDRSIVLLESPSSVDIPEKMKFEK 121
              +   +ES GDN+F+ K  ++ ++ RI  GGPW FDRS++++  P  +   +K  F  
Sbjct: 65  RTTKETKVESLGDNIFLFKFASKSEKKRILFGGPWHFDRSLMVVIEPMGIGDVKKQDFTH 124

Query: 122 ATFWIQFHNVPVAYRTEQTARILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLCR 181
           A FW+Q HN+P+    ++  + +G R+GKV  + T+DA EC G F+RVR+ VNV  PL +
Sbjct: 125 ALFWVQIHNIPIMCMDKEIIQEIGGRIGKVQEVETDDAGECMGSFVRVRIMVNVTRPLPK 184

Query: 182 CLSITVEGSKQVWVTIRYERLPDFCYHCGLIGHVAAECSEEEKEESYESGHQTELKPFGP 241
            L + +E   Q+ + I YE+LPDFC+ CGLIGH   EC + +       G   +   +G 
Sbjct: 185 RLLLKLEDGGQISLRIAYEKLPDFCFCCGLIGHQFRECLDYK-------GQSKDDLTYGA 244

Query: 242 WMKADEFFSWYRQGGRRPDGGRG 265
           WM+A       RQ  R  D G G
Sbjct: 245 WMRAQTRAERARQ-ARDKDHGNG 259

[Close]

BLAST of Lcy09g000130 vs. NCBI nr
Match: XP_024033132.1 (uncharacterized protein LOC112095437 [Citrus clementina])

HSP 1 Score: 193.4 bits (490), Expect = 4.0e-45
Identity = 91/244 (37.30%), Postives = 141/244 (57.79%), Query Frame = 0


Query: 2   DIVDKLDQMSLSAKESNTIKLDEIGKGKVKENVQHCLIGKVISNKTVNVEAFKRVMRKAW 61
           +++ K   ++L  +E++        K K  + V  CL+GK++  + VN E  K  + +AW
Sbjct: 5   ELIRKCQAITLEGEEADKFIFAGQMKEKGSKAVAGCLVGKILLARGVNREGLKTALDQAW 64

Query: 62  SFCRGIAIESAGDNLFMIKLGAEQDRMRIQSGGPWCFDRSIVLLESPSSVDIPEKMKFEK 121
                  +ES G N+F+ K  +E D+ R+ +GGPW FDR++++L+ P  +   +K  F  
Sbjct: 65  RTVHDFKVESLGSNIFVFKFLSEADKKRVFNGGPWHFDRALMVLQEPKGIGSIKKQSFSH 124

Query: 122 ATFWIQFHNVPVAYRTEQTARILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLCR 181
            +FWI+ HNVP+        R LGSRVGKV +IG +   EC+G F+R++V VN+ +PL +
Sbjct: 125 VSFWIRIHNVPLMCMDTSIIRELGSRVGKVEDIGMDAQGECFGEFVRIQVSVNITKPLKK 184

Query: 182 CLSITVEGSKQVWVTIRYERLPDFCYHCGLIGHVAAECSEEEKEESYESGHQTELKPFGP 241
            + +  E  + + + + YERLPDFC+ CG IGH   EC E +       G Q E  PFGP
Sbjct: 185 LIVLKQEDDEDIPLPVVYERLPDFCFCCGCIGHQFRECMEYK-------GQQKENLPFGP 241

Query: 242 WMKA 246
           W+KA
Sbjct: 245 WLKA 241

[Close]

BLAST of Lcy09g000130 vs. NCBI nr
Match: VVA32948.1 (PREDICTED: DUF4283 domain-containing [Prunus dulcis])

HSP 1 Score: 193.0 bits (489), Expect = 5.2e-45
Identity = 116/354 (32.77%), Postives = 189/354 (53.39%), Query Frame = 0


Query: 2   DIVDKLDQ-MSLSAKESNTIKLDEIGKGKVKENVQHCLIGKVISNKTVNVEAFKRVMRKA 61
           ++++ L++ + L+  E + I++ +     V E ++  L+GKV++    N EAFK+ M K 
Sbjct: 3   EVINSLEKTLILTEDERDAIQVRQNDIDDVGERLKMSLVGKVLTTTAFNREAFKQTMLKI 62

Query: 62  WSFCRGIAIESAGDNLFMIKLGAEQDRMRIQSGGPWCFDRSIVLLESPSSVDIPEKMKFE 121
           WS  R + ++  G+NLF+     E DR+R+   GPW FD+++VLLE+P     P KM  +
Sbjct: 63  WSTVREVVVKDIGENLFLFIFATEGDRLRVLRSGPWNFDKALVLLETPDGSIAPSKMLLK 122

Query: 122 KATFWIQFHNVPVAYRTEQTARILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLC 181
            A FWIQ HNVP++  +    R +G+  G+ L++      +C GRFLR+RV V+V++PL 
Sbjct: 123 YADFWIQVHNVPLSCMSTNLGRQIGNSFGRCLDVIEGMDGKCLGRFLRLRVSVDVSKPLR 182

Query: 182 RCLSITVEGSKQVWVTIRYERLPDFCYHCGLIGHVAAECSEEEKEESYESGHQTELKPFG 241
           R   +T+     V+V  RYERLP+FC+ CG +GHV  ECS  +     ++  Q + KP+G
Sbjct: 183 RGKKMTLPSGNTVFVEFRYERLPEFCFCCGRLGHVFKECSFVD-----QAAKQADEKPYG 242

Query: 242 PWMKADEFFSWYRQGG-RRPDGGRGRGRGRDTDVFQHPLEEHESHSSHDTSRTGNRSL-- 301
            W+KA + F   R G  +R +G      G      +  +E  +S+SS +     +  L  
Sbjct: 243 SWLKATKDFHSIRAGNPKRTNGSGSEAEGDGAKEKEMEVEGQQSNSSGEKVAESSLGLLS 302

Query: 302 -----QDRVETKKEDEQNESVVQPENNQSKHQPIGEAPITDEIATAADGEAQSI 347
                + R   ++ D +  + V P NN       G +    ++AT+ D   Q I
Sbjct: 303 KQRVGERRQPPREADREAVAGVGPANNGGS----GHSQNIIDVATSQDPANQVI 347

[Close]

BLAST of Lcy09g000130 vs. NCBI nr
Match: TXG54301.1 (hypothetical protein EZV62_019557 [Acer yangbiense])

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-44
Identity = 88/245 (35.92%), Postives = 148/245 (60.41%), Query Frame = 0


Query: 2   DIVDKLDQMSLSAKESNTIKLDEIGKGKVKENVQHCLIGKVISNKTVNVEAFKRVMRKAW 61
           +I    + +S+  ++    ++ E      +E+V HCL+GK++S + VN EAF+ V+   W
Sbjct: 5   EIAKLCENLSIKDEDGEIHQISEEVGRVGEEDVNHCLVGKILSGRRVNREAFRMVIESLW 64

Query: 62  SFCRGIAIESAGDNLFMIKLGAEQDRMRIQSGGPWCFDRSIVLLESPSSVDIPEKMKFEK 121
           S    + IE   +N+F+      +DR ++   GPW FD+ +++LE P       K+KF K
Sbjct: 65  SPFGNVDIEMVSENVFLFFFNKPEDRNKVWDRGPWHFDKCLLVLEKPEGTGEISKLKFNK 124

Query: 122 ATFWIQFHNVPVAYRTEQTARILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLCR 181
           A FWIQ H++P+     +TA+ L  ++G+V+ I T D+ +CWG+FLRV+V++++++PL R
Sbjct: 125 ADFWIQIHDIPIMCMNRRTAKWLAEQIGEVIEIPT-DSRDCWGKFLRVKVRIDISKPLKR 184

Query: 182 CLSITVEGSKQVWVT-IRYERLPDFCYHCGLIGHVAAECSEEEKEESYESGHQTELKPFG 241
            L + ++ S  + V  ++YERLP+FCY CG +GH  +EC + E ++    G       FG
Sbjct: 185 WLRLGLDRSGNIVVVGLKYERLPEFCYACGWLGHGISECPDTEAKKEAMEGATLR---FG 244

Query: 242 PWMKA 246
           PWM+A
Sbjct: 245 PWMRA 245

[Close]

BLAST of Lcy09g000130 vs. TAIR 10
Match: AT2G01050.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 85.9 bits (211), Expect = 8.3e-17
Identity = 61/250 (24.40%), Postives = 109/250 (43.60%), Query Frame = 0


Query: 37  CLIGKVISNKTVNVEAFKRVMRKAWSFCRGIAIESAGDNLFMIKLGAEQDRMRIQSGGPW 96
           C+I KV+ ++ + +    R +R+ W     + +       FMI+   E++ M   +GGPW
Sbjct: 80  CMIVKVLGSQ-IPISVLNRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGGPW 139

Query: 97  CFDRSIVLLESPSSVDIPEKMKFEKATFWIQFHNVPVAYRTEQTARILGSRVGKVLNIGT 156
               + +L++  SS   P +        W++  N+P  Y        +   +G+ L +  
Sbjct: 140 RVLGNYLLVQDWSSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVDM 199

Query: 157 NDADECWGRFLRVRVQVNVAEPLCRCLSITVEGSKQVWVTIRYERLPDFCYHCGLIGHVA 216
           N  +   GRF RV ++VN+A+PL    ++ + G +     + YE L   C  CG+ GH+ 
Sbjct: 200 NTINFDKGRFARVCIEVNLAKPLKG--TVLINGDRYF---VAYEGLSKICSSCGIYGHLV 259

Query: 217 AECSEE---EKEESYESGHQTELKPFGPWMKADEFFSWYRQGGRRP-------------D 271
             C      +     E+     + P G  M+ D+ F+  ++  RRP              
Sbjct: 260 HSCPRNVVVKVSAGAETVTDRAVVPVG--MEGDDGFTVVQRTARRPAAPVQKMVFAVGAS 319

[Close]

BLAST of Lcy09g000130 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 79.3 bits (194), Expect = 7.8e-15
Identity = 42/201 (20.90%), Postives = 87/201 (43.28%), Query Frame = 0


Query: 38  LIGKVISNKTVNVEAFKRVMRKAWSFCRGIAIESAGDNLFMIKLGAEQDRMRIQSGGPWC 97
           L+G++++ +T +VE     +   W     +      D  F ++  +E D +      PW 
Sbjct: 39  LLGRILNPQTQSVERAILELPYQWGLGTQVHGRILDDRCFQVRFRSEIDLLNGLRRAPWV 98

Query: 98  FDRSIVLLESPSSVDIPEKMKFEKATFWIQFHNVPVAYRTEQTARILGSRVGKVLNIGTN 157
           F+   + L+     D P +        W+    +P+ Y +E+T  I+ S +G+V+ +  N
Sbjct: 99  FNEWFIALQRWE--DFPTEDFLTFIDVWVHIRGIPLPYVSERTVEIIASTLGEVVAMDFN 158

Query: 158 DADECWGRFLRVRVQVNVAEPLCRCLSITVEGSKQVWVTIRYERLPDFCYHCGLIGHVAA 217
           +       F+RV+V+++  EPL     +     ++  +   YE+L   C +C  + H  +
Sbjct: 159 EETTSQITFIRVKVRMDFTEPLRFFRRVRFASRERAMIGFEYEKLQRVCTNCCRVNHQVS 218

Query: 218 ECSEEEKEESYESGHQTELKP 239
            C     +E  ++     + P
Sbjct: 219 HCPYVVHQEEMDNEPDVLVSP 237

[Close]

BLAST of Lcy09g000130 vs. TAIR 10
Match: AT4G02000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G13450.1); Has 165 Blast hits to 161 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 2.1e-07
Identity = 26/110 (23.64%), Postives = 51/110 (46.36%), Query Frame = 0


Query: 125 WIQFHNVPVAYRTEQTARILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLCRCLS 184
           W+Q   +P+ Y  E+TA  +   +GK+L +  +D+      ++RVR++  + + L     
Sbjct: 44  WVQMRGIPLLYVCEETALEIAHELGKILTLDFHDSTTTQIAYIRVRIRFGITDRLRFFQR 103

Query: 185 ITVEGSKQVWVTIRYERLPDFCYHCGLIGHVAAECSEEEKEESYESGHQT 235
           I  +  +   ++ +YERL   C  C  + H    C   + E  +   + T
Sbjct: 104 IIFDFGEAALISFQYERLRRICSSCFRMTHHRNSCPYRQIEPLHRVTNST 153

[Close]

BLAST of Lcy09g000130 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 52.4 bits (124), Expect = 1.0e-06
Identity = 33/137 (24.09%), Postives = 61/137 (44.53%), Query Frame = 0


Query: 83  AEQDRMRIQSGGPWCFDRSIVLLESPSSVDIPEKMKFEKATFWIQFHNVPVAYRTEQTAR 142
           +E+    I   GPW F+  + +++  +   +    +F++  FWIQ   +P+ + T +   
Sbjct: 68  SEESMFSILRRGPWSFNDWMCVIQRWTK--LHSDAEFKRIPFWIQIRGIPLRFLTARIIT 127

Query: 143 ILGSRVGKVLNIGTNDADECWGRFLRVRVQVNVAEPLCRCLSITVEGSKQVWVTIRYERL 202
            +G R+G  L + TN                     L R +S+         +  +YE+L
Sbjct: 128 SIGERMG--LFLETN---------------------LGRDVSV---------LKFQYEKL 170

Query: 203 PDFCYHCGLIGHVAAEC 220
            +FC  CG++ H A+EC
Sbjct: 188 KNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:

BLAST of Lcy09g000130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04244	2.9e-06	23.64	Uncharacterized protein At4g02000 OS=Arabidopsis thaliana OX=3702 GN=At4g02000 P...	[more]

BLAST of Lcy09g000130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5E4G034	2.5e-45	32.77	PREDICTED: DUF4283 domain-containing OS=Prunus dulcis OX=3755 GN=ALMOND_2B021569...	[more]
A0A5C7HBM7	5.6e-45	35.92	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01955...	[more]
A0A5C7HUW5	2.1e-44	34.29	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01525...	[more]
A0A5C7IJL3	2.8e-44	39.56	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00419...	[more]
A0A5C7HT01	2.8e-44	38.37	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01474...	[more]

BLAST of Lcy09g000130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_024035600.1	1.2e-46	36.48	uncharacterized protein LOC112096408 [Citrus clementina]	[more]
XP_006485824.1	3.6e-46	35.74	uncharacterized protein LOC102613298 [Citrus sinensis]	[more]
XP_024033132.1	4.0e-45	37.30	uncharacterized protein LOC112095437 [Citrus clementina]	[more]
VVA32948.1	5.2e-45	32.77	PREDICTED: DUF4283 domain-containing [Prunus dulcis]	[more]
TXG54301.1	1.2e-44	35.92	hypothetical protein EZV62_019557 [Acer yangbiense]	[more]

BLAST of Lcy09g000130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01050.1	8.3e-17	24.40	zinc ion binding;nucleic acid binding	[more]
AT5G36228.1	7.8e-15	20.90	nucleic acid binding;zinc ion binding	[more]
AT4G02000.1	2.1e-07	23.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G42140.1	1.0e-06	24.09	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 174..220 e-value: 1.1E-12 score: 47.5
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 30..171 e-value: 1.4E-27 score: 96.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..312
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 23..314
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 23..314
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 206..221 score: 9.438442

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g000130.1	Lcy09g000130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding