Homology
BLAST of Lcy08g019110 vs. ExPASy Swiss-Prot
Match:
Q9ZUE9 (Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana OX=3702 GN=At2g06000 PE=2 SV=1)
HSP 1 Score: 569.7 bits (1467), Expect = 3.9e-161
Identity = 282/520 (54.23%), Postives = 379/520 (72.88%), Query Frame = 0
Query: 66 SIAQFYSFADGVSRARPFYD--REVIRNPEAWLVKVVCTLF-FRSHSSNACFGYLSRNLN 125
+IA F++ + G ++ARP + REVI PEAWLVK+V TLF +R S+ CF YLS+NLN
Sbjct: 9 AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68
Query: 126 PSIAFEVIKRF-RDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFDC 185
P I+FEV+K+ +P +G +F+EFSR L+I H+F TY+LL R+LC+ GLHD A +F+C
Sbjct: 69 PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128
Query: 186 MRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQ 245
M+SDG+ P++ ++ LVSS A+ GK+ A L + + ++ V N+LLN LVK ++
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188
Query: 246 VDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 305
V++A+ LF EHL D TFNILIRGLC +G+ +KA E M FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248
Query: 306 LINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSS 365
LI GFC+ NE++K ++ K+V+S SPDV+TYTS+ISGYCK G M+ AS L D+M+
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308
Query: 366 GIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQG 425
GI P + TFNVL+DG+ KAG+M +A + KM+ GC PDVVT TSLIDGYCR G+V QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368
Query: 426 LKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDG 485
+LWEEM R + PN +TY++LINALC ENR+ +AR L L +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428
Query: 486 FCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPD 545
FCKAGKV+EANVIV EM++KKC PDKITFTILIIG+CMKGRM EA+S+F+KM+ C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488
Query: 546 EITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRS 582
+IT++SL+SCLLKAGM EA + Q A + + ++ L +
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLET 526
BLAST of Lcy08g019110 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 263.8 bits (673), Expect = 4.5e-69
Identity = 155/480 (32.29%), Postives = 257/480 (53.54%), Query Frame = 0
Query: 116 YLSRNLNPSIAFE-VIKRFRDPLLGLKFFEFSRTH--------------LSINHTFNTYD 175
+LS N P A ++K D L LKF ++ H L+ + T
Sbjct: 41 HLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQ 100
Query: 176 LLLRNLCQMGLHDS-AKIVFDCMRS--DGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEV 235
+L ++ L D A +VF ++ D + SS+ +L+V S +++ ID A +
Sbjct: 101 ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA 160
Query: 236 HCYGIKVSPFVYNNLLNMLVK-QNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGE 295
+G YN +L+ ++ + + A +F+E LE P+V+T+NILIRG C G
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 296 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYT 355
ID A F M GC P++V+YNTLI+G+C++ +I G LL+ + ++KG+ P++I+Y
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM-ALKGLEPNLISYN 280
Query: 356 SIISGYCKLGDMQAASELFDEMVSSGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLL 415
+I+G C+ G M+ S + EM G ++ T+N LI G+ K G+ ALVM+ +ML
Sbjct: 281 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 340
Query: 416 GCTPDVVTITSLIDGYCRAGEVHQGLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEA 475
G TP V+T TSLI C+AG +++ ++ ++M VR L PN TY L++ ++ + EA
Sbjct: 341 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 400
Query: 476 RNFLRYLKLSEVVPKPFIYNPVIDGFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIG 535
LR + + P YN +I+G C GK+++A ++ +M+EK SPD ++++ ++ G
Sbjct: 401 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 460
Query: 536 NCMKGRMVEAISLFYKMLETNCIPDEITINSLISCLLKAGMPNEASQIKQAALENLNLGL 577
C + EA+ + +M+E PD IT +SLI + EA + + E L +GL
Sbjct: 461 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE---EMLRVGL 516
BLAST of Lcy08g019110 vs. ExPASy Swiss-Prot
Match:
Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)
HSP 1 Score: 237.3 bits (604), Expect = 4.6e-61
Identity = 138/399 (34.59%), Postives = 215/399 (53.88%), Query Frame = 0
Query: 158 TYDLLLRNLCQMGLHDSAKIVFDCMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEV 217
TY+ ++ C++G + A + G+ PD L+ Q +DSA K +E+
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 218 HCYGIKVSPFVYNNLLNMLVKQNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEI 277
G + + Y +L++ L ++DEA+ LF + + P V T+ +LI+ LC
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339
Query: 278 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTS 337
+A + M G P+I +Y LI+ C + K +LL ++ KG+ P+VITY +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE-KGLMPNVITYNA 399
Query: 338 IISGYCKLGDMQAASELFDEMVSSGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLG 397
+I+GYCK G ++ A ++ + M S + PN T+N LI G+ K+ ++ A+ + KML
Sbjct: 400 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERK 459
Query: 398 CTPDVVTITSLIDGYCRAGEVHQGLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEAR 457
PDVVT SLIDG CR+G +L M R L P+ +TY +I++LCK R++EA
Sbjct: 460 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 519
Query: 458 NFLRYLKLSEVVPKPFIYNPVIDGFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGN 517
+ L+ V P +Y +IDG+CKAGKVDEA++++ +M K C P+ +TF LI G
Sbjct: 520 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 579
Query: 518 CMKGRMVEAISLFYKMLETNCIPDEITINSLISCLLKAG 557
C G++ EA L KM++ P T LI LLK G
Sbjct: 580 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
BLAST of Lcy08g019110 vs. ExPASy Swiss-Prot
Match:
Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)
HSP 1 Score: 235.3 bits (599), Expect = 1.7e-60
Identity = 142/433 (32.79%), Postives = 209/433 (48.27%), Query Frame = 0
Query: 158 TYDLLLRNLCQMGLHDSAKIVFDCMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEV 217
T+ L+ LC G A + D M G PD + LV+ GK A +D++
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 218 HCYGIKVSPFVYNNLLNMLVKQNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEI 277
YG + + Y +LN++ K Q A+ L R+ E D ++I+I GLC+ G +
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 278 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMK----------- 337
D AF F M G +I++YN LI GFC G LL+++ K
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 338 -----------------------GVSPDVITYTSIISGYCKLGDMQAASELFDEMVSSGI 397
G++PD ITYTS+I G+CK + A+++ D MVS G
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 398 KPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQGLK 457
PN TFN+LI+G+ KA + L ++ KM L G D VT +LI G+C G+++ +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 458 LWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDGFC 517
L++EM+ R + PN+ TY +L++ LC ++A ++ S++ IYN +I G C
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 518 KAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPDEI 557
A KVD+A + + K P T+ I+I G C KG + EA LF KM E PD
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
BLAST of Lcy08g019110 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 233.4 bits (594), Expect = 6.6e-60
Identity = 133/440 (30.23%), Postives = 233/440 (52.95%), Query Frame = 0
Query: 140 LKFFEFSRTHLS---INHTFNTYDLLLRNLCQMGLHDSAKIVFDCMRSDGIFPDSSIVEL 199
LK E S +S I +T+++L++ LC+ A ++ + M S G+ PD
Sbjct: 170 LKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTT 229
Query: 200 LVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQVDEAVLLFRE-HLEP 259
++ + G +D A + +++ +G S N +++ K+ +V++A+ +E +
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD 289
Query: 260 YFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKG 319
F PD YTFN L+ GLC+ G + A E M G PD+ +YN++I+G C++ E+ +
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 320 HDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSSGIKPNDFTFNVLID 379
++L ++ + + SP+ +TY ++IS CK ++ A+EL + S GI P+ TFN LI
Sbjct: 350 VEVLDQMIT-RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 409
Query: 380 GFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQGLKLWEEMIVRDLSP 439
G + R A+ ++E+M GC PD T LID C G++ + L + ++M + +
Sbjct: 410 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 469
Query: 440 NVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDGFCKAGKVDEANVIV 499
+V TY LI+ CK N+ +EA +++ V YN +IDG CK+ +V++A ++
Sbjct: 470 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 529
Query: 500 AEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPDEITINSLISCLLKA 559
+M + PDK T+ L+ C G + +A + M C PD +T +LIS L KA
Sbjct: 530 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 589
Query: 560 GMPNEASQ-IKQAALENLNL 575
G AS+ ++ ++ +NL
Sbjct: 590 GRVEVASKLLRSIQMKGINL 608
BLAST of Lcy08g019110 vs. ExPASy TrEMBL
Match:
A0A6J1G470 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450639 PE=4 SV=1)
HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 541/595 (90.92%), Postives = 565/595 (94.96%), Query Frame = 0
Query: 1 MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
MKSREWKQES QSE PNRIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF
Sbjct: 1 MKSREWKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
Query: 61 RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
RASNF IAQFYS ADGVSRARPF DREVIRNPEAWLVKVVCTLFFRSHS NACFGYLSRN
Sbjct: 61 RASNFFIAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSINACFGYLSRN 120
Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLCQMGL+DSAK VFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFD 180
Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
CMR+DGI PDSSIVE+LVSS A++GK+D+AK FLDE+HCYGIKVSPFVYNN LNMLVKQN
Sbjct: 181 CMRTDGILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQN 240
Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
QVDEAVLLFREHLEPYF PDVYTFNILIRGLCRIGE DKAFE+ QNM NFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYN 300
Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
TLINGFCRVNE+SKGH LLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVS
Sbjct: 301 TLINGFCRVNEVSKGHVLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVS 360
Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
SGIKPNDFTFNVLIDGFGKAG+MR AL MYEKMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKAGEMRLALAMYEKMLLLGCLPDVVTVTSLIDGYCRAGEVNQ 420
Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
GLKLWEEM VRDLSPNVYTYAVLINALCKENRIQEARNFLR+LK SE+VPKPFIYNPVID
Sbjct: 421 GLKLWEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEIVPKPFIYNPVID 480
Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
GFCKAGKVDEANVIVAEMQEKKC PDKITFTILIIGNCMKGRMVEAI++FYKMLET CIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIP 540
Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
DEITINSLISCLLKAG P+EASQIKQAA ENLN LLSL++PLT RKSSCVPVA+
Sbjct: 541 DEITINSLISCLLKAGRPDEASQIKQAAFENLNFDLLSLKNPLT-RKSSCVPVAI 594
BLAST of Lcy08g019110 vs. ExPASy TrEMBL
Match:
A0A6J1KES2 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493657 PE=4 SV=1)
HSP 1 Score: 1093.6 bits (2827), Expect = 0.0e+00
Identity = 539/595 (90.59%), Postives = 564/595 (94.79%), Query Frame = 0
Query: 1 MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
MKSRE KQES QSE PNRIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSRA RF
Sbjct: 1 MKSRELKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRACRF 60
Query: 61 RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
RASNF IAQFYS ADGVSRARPF DREVIRNPE+WLVKVVCTLFFRSHS NACFGYLSRN
Sbjct: 61 RASNFFIAQFYSIADGVSRARPFCDREVIRNPESWLVKVVCTLFFRSHSLNACFGYLSRN 120
Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLCQMGL+DSAK VFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFD 180
Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
CMR+DGI PDSSIVE+LVSS AQ+GK+D+AK FLDE+HCYGIKV PFVYNN LNMLVKQN
Sbjct: 181 CMRTDGILPDSSIVEILVSSYAQLGKLDAAKNFLDEIHCYGIKVIPFVYNNFLNMLVKQN 240
Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
QVDEAVLLFREHLEPYF PDVYTFNILIRGLCRIGE DKAFE+ QNM NFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYN 300
Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
TLINGFCRVNE+SKGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVS
Sbjct: 301 TLINGFCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVS 360
Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
SGIKPNDFTFNVLIDGFGKAG+MR AL MY+KMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQ 420
Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
GLKLWEEM VRDLSPNVYTYAVLINALCKENRIQEARNFLR+LKLSE+VPKPFIYNPVID
Sbjct: 421 GLKLWEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSEIVPKPFIYNPVID 480
Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
GFCKAGKVDEANVIVAEMQEKKC PDKITFTILIIGNCMKGRMVEAI++FYKMLET CIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIP 540
Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
DEITINSLISCLLKAGMP+EASQIKQAALE LN LLSL++PLT KSSCVPVA+
Sbjct: 541 DEITINSLISCLLKAGMPDEASQIKQAALEYLNFDLLSLKNPLT-IKSSCVPVAI 594
BLAST of Lcy08g019110 vs. ExPASy TrEMBL
Match:
A0A6J1DMW0 (pentatricopeptide repeat-containing protein At2g06000 OS=Momordica charantia OX=3673 GN=LOC111021880 PE=4 SV=1)
HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 536/595 (90.08%), Postives = 563/595 (94.62%), Query Frame = 0
Query: 1 MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
MKSREW+QESD QSERP+RIPGCKRTRIVIEN+WEDRAE SDGVGLQMTLLFFSSRAYRF
Sbjct: 1 MKSREWEQESDTQSERPDRIPGCKRTRIVIENLWEDRAESSDGVGLQMTLLFFSSRAYRF 60
Query: 61 RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
RAS+FSIAQF+SF DG SRAR FYDREVIRNPEAWL KVVCTLFFRSHS N CFGYLSRN
Sbjct: 61 RASSFSIAQFHSFTDGGSRARSFYDREVIRNPEAWLAKVVCTLFFRSHSLNGCFGYLSRN 120
Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
L PSIAFEVIKRF+DP+LGLKFFEFSR HLSINH+FNTYDLL+RNLCQMGLH SAK+VFD
Sbjct: 121 LTPSIAFEVIKRFKDPILGLKFFEFSRAHLSINHSFNTYDLLMRNLCQMGLHGSAKMVFD 180
Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
CMR DGI PDSS+VELLVSS AQMGK+DSAK FL+EVHCYGIKVSPFVYNNLLN+LVKQN
Sbjct: 181 CMRCDGILPDSSVVELLVSSYAQMGKLDSAKIFLNEVHCYGIKVSPFVYNNLLNLLVKQN 240
Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
QVDEAVLLFREHLEPYFIPD YTFNI+IRGLCRIGEI KAFEFFQNMGNFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFIPDAYTFNIIIRGLCRIGEIHKAFEFFQNMGNFGCFPDIVSYN 300
Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
TLINGFCRVNEISKGHDLLKEVQS+KGV+PDVITYTSIISGYCKLGDM+AAS L DEMV
Sbjct: 301 TLINGFCRVNEISKGHDLLKEVQSVKGVAPDVITYTSIISGYCKLGDMKAASGLLDEMVG 360
Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
SGIKPNDFTFNVLI GFGK GDM SAL MYEKMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIHGFGKVGDMISALAMYEKMLLLGCPPDVVTLTSLIDGYCRAGEVNQ 420
Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
GLKLWEEM VR LSPNVYTYAVLINALCKENRIQEAR FLR+LKLSEVVPK FIYNPVID
Sbjct: 421 GLKLWEEMKVRGLSPNVYTYAVLINALCKENRIQEARFFLRHLKLSEVVPKTFIYNPVID 480
Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
GFCKAGKVDEANVIVAEM+EKKCSPDKITFTILIIGNCM+GRMVEAIS+FYKMLETNCIP
Sbjct: 481 GFCKAGKVDEANVIVAEMREKKCSPDKITFTILIIGNCMQGRMVEAISIFYKMLETNCIP 540
Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
DEITINSLISCLLKAGMPNEASQIKQAA+ENLNLGLLSLR+PL RK SCVP+AV
Sbjct: 541 DEITINSLISCLLKAGMPNEASQIKQAAVENLNLGLLSLRNPLV-RKPSCVPIAV 594
BLAST of Lcy08g019110 vs. ExPASy TrEMBL
Match:
A0A1S3CB42 (pentatricopeptide repeat-containing protein At2g06000 OS=Cucumis melo OX=3656 GN=LOC103498823 PE=4 SV=1)
HSP 1 Score: 1043.9 bits (2698), Expect = 2.6e-301
Identity = 520/588 (88.44%), Postives = 548/588 (93.20%), Query Frame = 0
Query: 8 QESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFSI 67
+ES+ QSERP CK+ RIVIENIWEDRAEP+DGVGLQMTLLFFSSRAYR R SNFSI
Sbjct: 4 RESERQSERPT---VCKQERIVIENIWEDRAEPNDGVGLQMTLLFFSSRAYRLRLSNFSI 63
Query: 68 AQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRNLNPSIAF 127
+QFYS AD VSRARPF DRE+IRN EAWLVKVVCTLF RSHS NACFGYLSRNLNPSIAF
Sbjct: 64 SQFYSLADSVSRARPFCDREIIRNSEAWLVKVVCTLFSRSHSLNACFGYLSRNLNPSIAF 123
Query: 128 EVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFDCMRSDGI 187
EVIKRFRDPLLGLKFFEFSR HLSINHTFNTYDLL+RNLC++GL+DSAKIVFDCMRSDGI
Sbjct: 124 EVIKRFRDPLLGLKFFEFSRIHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGI 183
Query: 188 FPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQVDEAVL 247
PDSSI+ELLVSS A+MGK DSAK FL+EVHCYGIKVSPFVYNNLLNMLVKQN VDEAV
Sbjct: 184 LPDSSILELLVSSYARMGKFDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVS 243
Query: 248 LFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC 307
LFREHLEPYF+PDVY+FNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC
Sbjct: 244 LFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC 303
Query: 308 RVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSSGIKPND 367
RVNEISKGHDLLKEV +KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVSSGIKPN+
Sbjct: 304 RVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNN 363
Query: 368 FTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQGLKLWEE 427
FTFNVLIDGFGK G+MRSA+VMYEKMLLLGC PDVVT+TSLIDGYCR GEV+QGLKLWEE
Sbjct: 364 FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCPPDVVTVTSLIDGYCREGEVNQGLKLWEE 423
Query: 428 MIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDGFCKAGK 487
M +R+LSPNVYTYAVLINALCKENRIQEARNFLR+LK SEVVPKPFIYNPVID FCKAG+
Sbjct: 424 MKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEVVPKPFIYNPVIDRFCKAGQ 483
Query: 488 VDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPDEITINS 547
VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRMVEAIS FYKM+E NCIPDEITINS
Sbjct: 484 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCIPDEITINS 543
Query: 548 LISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
LISCLLKAGMPNEASQIKQAAL+ LNLG LSL S LT RKSS VPVAV
Sbjct: 544 LISCLLKAGMPNEASQIKQAALQKLNLGSLSLGSLLT-RKSSSVPVAV 587
BLAST of Lcy08g019110 vs. ExPASy TrEMBL
Match:
A0A5A7V6K1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001250 PE=4 SV=1)
HSP 1 Score: 1043.9 bits (2698), Expect = 2.6e-301
Identity = 520/588 (88.44%), Postives = 549/588 (93.37%), Query Frame = 0
Query: 8 QESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRFRASNFSI 67
+ES+ QSERP CK+ RIVIENIWEDRAEP+DGVGLQMTLLFFSSRAYR R SNFSI
Sbjct: 4 RESERQSERPT---VCKQERIVIENIWEDRAEPNDGVGLQMTLLFFSSRAYRLRLSNFSI 63
Query: 68 AQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRNLNPSIAF 127
+QFYS AD VSRARPF DRE+IRN EAWLVKVVCTLF RSHS NACFGYLSRNLNPSIAF
Sbjct: 64 SQFYSLADSVSRARPFCDREIIRNSEAWLVKVVCTLFSRSHSLNACFGYLSRNLNPSIAF 123
Query: 128 EVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFDCMRSDGI 187
EVIKRFRDPLLGLKFFEFSR HLSINHTFNTYDLL+RNLC++GL+DSAKIVFDCMRSDGI
Sbjct: 124 EVIKRFRDPLLGLKFFEFSRIHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGI 183
Query: 188 FPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQVDEAVL 247
PDSSI+ELLVSS A+MGK+DSAK FL+EVHCYGIKVSPFVYNNLLNMLVKQN VDEAV
Sbjct: 184 SPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVS 243
Query: 248 LFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC 307
LFREHLEPYF+PDVY+FNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC
Sbjct: 244 LFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC 303
Query: 308 RVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSSGIKPND 367
RVNEISKGHDLLKEV +KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVSSGIKPN+
Sbjct: 304 RVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNN 363
Query: 368 FTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQGLKLWEE 427
FTFNVLIDGFGK G+MRSA+VMYEKMLLLGC PDVVT+TSLIDGYCR GEV+QGLKLWEE
Sbjct: 364 FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCPPDVVTVTSLIDGYCREGEVNQGLKLWEE 423
Query: 428 MIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDGFCKAGK 487
M +R+LSPNVYTYAVLINALCKENRIQEARNFLR+LK SEVVPKPFIYNPVID FCKAG+
Sbjct: 424 MKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEVVPKPFIYNPVIDRFCKAGQ 483
Query: 488 VDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPDEITINS 547
VDEAN IVAEMQEKKC PDKITFTILIIGNCMKGRMVEAIS FYKM+E NCIPDEITINS
Sbjct: 484 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCIPDEITINS 543
Query: 548 LISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
LISCLLKAGMPNEASQIKQAAL+ LNLG LSL S LT RKSS VPVAV
Sbjct: 544 LISCLLKAGMPNEASQIKQAALQKLNLGSLSLGSLLT-RKSSSVPVAV 587
BLAST of Lcy08g019110 vs. NCBI nr
Match:
KAG7030515.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1104.0 bits (2854), Expect = 0.0e+00
Identity = 540/595 (90.76%), Postives = 567/595 (95.29%), Query Frame = 0
Query: 1 MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
MKSREWKQES QSE PNRIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF
Sbjct: 1 MKSREWKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
Query: 61 RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
RASNF IAQFYS ADGVSRARPF DREVIRNPEAWLVKVVCTLFFRSHS NACFGYLSRN
Sbjct: 61 RASNFFIAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSLNACFGYLSRN 120
Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLCQMGL+DSAK VFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFD 180
Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
CMR+DGI PDSSIVE+LVSS +++GK+D+AK FLDE+HCYGIKVSPFVYNN LNMLVKQN
Sbjct: 181 CMRADGILPDSSIVEILVSSYSRLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQN 240
Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
QVDEAVLLFREHLEPYF PDVYTFNILIRGLCRIGE DKAFE+ QNM NFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYN 300
Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
TLINGFCRVN++SKGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVS
Sbjct: 301 TLINGFCRVNDVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVS 360
Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
SGIKPNDFTFNVLIDGFGKAG+MR AL MY+KMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQ 420
Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
GLKLWEEM VRDLSPNVYTYAVLINALCKENRIQEARNFLR+LK SE+VPKPFIYNPVID
Sbjct: 421 GLKLWEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEIVPKPFIYNPVID 480
Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
GFCKAGKVDEANVIVAEMQEKKC PDKITFTILIIGNCMKGRMVEAI++FYKMLET CIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIP 540
Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
DEITINSLISCLLKAGMP+EASQIKQAA ENLN LLSL++PLT RKSSCVPVA+
Sbjct: 541 DEITINSLISCLLKAGMPDEASQIKQAAFENLNFDLLSLKNPLT-RKSSCVPVAI 594
BLAST of Lcy08g019110 vs. NCBI nr
Match:
XP_023546864.1 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1102.8 bits (2851), Expect = 0.0e+00
Identity = 540/595 (90.76%), Postives = 566/595 (95.13%), Query Frame = 0
Query: 1 MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
MKSREWKQES QSE PNRIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF
Sbjct: 1 MKSREWKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
Query: 61 RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
RASNF IAQFYS ADGVSRARPF DREVIRNPEAWLVKVVCTLFFRSHS NACFGYLSRN
Sbjct: 61 RASNFFIAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSLNACFGYLSRN 120
Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLCQMGL+DSAK VFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFD 180
Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
CMR+DGI PDSSIVE+LVSS A++GK+D+AK FLDE+HCYGIKVSPFVYNN LNMLVKQN
Sbjct: 181 CMRTDGILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQN 240
Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
QVDEAVLLFREHLEPYF PDVYTFNILIRGLCRIGE DKAFE+ QNM NFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYN 300
Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
TLINGFCRVNE+SKGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVS
Sbjct: 301 TLINGFCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMRAASELFDEMVS 360
Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
SGIKPNDFTFNVLIDGFGKAG+MR AL MY+KMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQ 420
Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
GLKLWEEM VRDLSPNVYTYAVLINALCKENRIQEARNFLR+LKLSE+VPKPFIYNPVID
Sbjct: 421 GLKLWEEMEVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSEIVPKPFIYNPVID 480
Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
GFCKAGKVDEANVIVAEMQEK+C PDKITFTILIIGNCMKGRMVEAI++FYKMLET CIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKRCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIP 540
Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
DEITINSLISCLLKAGMP+EASQIKQAA ENLN L SL++PLT KSSCVPVA+
Sbjct: 541 DEITINSLISCLLKAGMPDEASQIKQAAFENLNFDLSSLKNPLT-TKSSCVPVAI 594
BLAST of Lcy08g019110 vs. NCBI nr
Match:
XP_038890050.1 (pentatricopeptide repeat-containing protein At2g06000 [Benincasa hispida])
HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 544/595 (91.43%), Postives = 569/595 (95.63%), Query Frame = 0
Query: 1 MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
MK R+WKQ SD QSERP+RIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSR YRF
Sbjct: 1 MKCRDWKQISDTQSERPSRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRTYRF 60
Query: 61 RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
RASNFSIAQFYS ADGVSRARPF DREV+RNPE WLVKVVCTLFFRS S NACFGYLSRN
Sbjct: 61 RASNFSIAQFYSLADGVSRARPFCDREVLRNPETWLVKVVCTLFFRSISLNACFGYLSRN 120
Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSI HTFNTYDLL+RNLCQMGL+DSAKIVFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSIKHTFNTYDLLVRNLCQMGLNDSAKIVFD 180
Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
CMRSDGI PDSSIVEL+VSS AQMGK+DSAK FL+EVH YGIKVSPFVYNNLLNMLVKQN
Sbjct: 181 CMRSDGILPDSSIVELMVSSYAQMGKLDSAKNFLNEVHRYGIKVSPFVYNNLLNMLVKQN 240
Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
VDEAVLLFREHLEPY +PDVY+FNILIRGLCRIG+IDKAFEFFQNMGNFGCFPDIVSYN
Sbjct: 241 LVDEAVLLFREHLEPYLVPDVYSFNILIRGLCRIGKIDKAFEFFQNMGNFGCFPDIVSYN 300
Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
TLINGFCRVNEISKGHDLLKEV S+KGVSPDV+TYTS+ISGYCKLGDM+AAS+LFDEMVS
Sbjct: 301 TLINGFCRVNEISKGHDLLKEVLSIKGVSPDVVTYTSLISGYCKLGDMKAASDLFDEMVS 360
Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
SGIKPNDFTFNVLIDGFGK G+MRSALVMYEKMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKVGNMRSALVMYEKMLLLGCPPDVVTVTSLIDGYCRAGEVNQ 420
Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
GLKLWEEM VR+LSPNVYTYAVLINALCKENRIQEAR+FLR+LK+SEVVPKPFIYNPVID
Sbjct: 421 GLKLWEEMKVRNLSPNVYTYAVLINALCKENRIQEARSFLRHLKVSEVVPKPFIYNPVID 480
Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
GFCKAGKVDEANVIVAEMQEKKC PDKITFTILIIGNCMKGRMVEAIS FYKMLE NCIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMLEVNCIP 540
Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
DEITINSLISCLLKAGMPNEASQIKQAA+ENLNLGLLSL SPLT +KSSCVPVAV
Sbjct: 541 DEITINSLISCLLKAGMPNEASQIKQAAVENLNLGLLSLGSPLT-KKSSCVPVAV 594
BLAST of Lcy08g019110 vs. NCBI nr
Match:
XP_022946631.1 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita moschata])
HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 541/595 (90.92%), Postives = 565/595 (94.96%), Query Frame = 0
Query: 1 MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
MKSREWKQES QSE PNRIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF
Sbjct: 1 MKSREWKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
Query: 61 RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
RASNF IAQFYS ADGVSRARPF DREVIRNPEAWLVKVVCTLFFRSHS NACFGYLSRN
Sbjct: 61 RASNFFIAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRSHSINACFGYLSRN 120
Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLCQMGL+DSAK VFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFD 180
Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
CMR+DGI PDSSIVE+LVSS A++GK+D+AK FLDE+HCYGIKVSPFVYNN LNMLVKQN
Sbjct: 181 CMRTDGILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPFVYNNFLNMLVKQN 240
Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
QVDEAVLLFREHLEPYF PDVYTFNILIRGLCRIGE DKAFE+ QNM NFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYN 300
Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
TLINGFCRVNE+SKGH LLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVS
Sbjct: 301 TLINGFCRVNEVSKGHVLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVS 360
Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
SGIKPNDFTFNVLIDGFGKAG+MR AL MYEKMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKAGEMRLALAMYEKMLLLGCLPDVVTVTSLIDGYCRAGEVNQ 420
Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
GLKLWEEM VRDLSPNVYTYAVLINALCKENRIQEARNFLR+LK SE+VPKPFIYNPVID
Sbjct: 421 GLKLWEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSEIVPKPFIYNPVID 480
Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
GFCKAGKVDEANVIVAEMQEKKC PDKITFTILIIGNCMKGRMVEAI++FYKMLET CIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIP 540
Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
DEITINSLISCLLKAG P+EASQIKQAA ENLN LLSL++PLT RKSSCVPVA+
Sbjct: 541 DEITINSLISCLLKAGRPDEASQIKQAAFENLNFDLLSLKNPLT-RKSSCVPVAI 594
BLAST of Lcy08g019110 vs. NCBI nr
Match:
XP_022999210.1 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita maxima])
HSP 1 Score: 1093.6 bits (2827), Expect = 0.0e+00
Identity = 539/595 (90.59%), Postives = 564/595 (94.79%), Query Frame = 0
Query: 1 MKSREWKQESDAQSERPNRIPGCKRTRIVIENIWEDRAEPSDGVGLQMTLLFFSSRAYRF 60
MKSRE KQES QSE PNRIPGCKR RIVIENIWEDRAEPSDGVGLQMTLLFFSSRA RF
Sbjct: 1 MKSRELKQESVTQSEGPNRIPGCKRARIVIENIWEDRAEPSDGVGLQMTLLFFSSRACRF 60
Query: 61 RASNFSIAQFYSFADGVSRARPFYDREVIRNPEAWLVKVVCTLFFRSHSSNACFGYLSRN 120
RASNF IAQFYS ADGVSRARPF DREVIRNPE+WLVKVVCTLFFRSHS NACFGYLSRN
Sbjct: 61 RASNFFIAQFYSIADGVSRARPFCDREVIRNPESWLVKVVCTLFFRSHSLNACFGYLSRN 120
Query: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFD 180
LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLCQMGL+DSAK VFD
Sbjct: 121 LNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLCQMGLNDSAKTVFD 180
Query: 181 CMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQN 240
CMR+DGI PDSSIVE+LVSS AQ+GK+D+AK FLDE+HCYGIKV PFVYNN LNMLVKQN
Sbjct: 181 CMRTDGILPDSSIVEILVSSYAQLGKLDAAKNFLDEIHCYGIKVIPFVYNNFLNMLVKQN 240
Query: 241 QVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 300
QVDEAVLLFREHLEPYF PDVYTFNILIRGLCRIGE DKAFE+ QNM NFGCFPDIVSYN
Sbjct: 241 QVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNMENFGCFPDIVSYN 300
Query: 301 TLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVS 360
TLINGFCRVNE+SKGHDLLKEVQS+KGVSPDVITYTSIISGYCKLGDM+AASELFDEMVS
Sbjct: 301 TLINGFCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVS 360
Query: 361 SGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQ 420
SGIKPNDFTFNVLIDGFGKAG+MR AL MY+KMLLLGC PDVVT+TSLIDGYCRAGEV+Q
Sbjct: 361 SGIKPNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTSLIDGYCRAGEVNQ 420
Query: 421 GLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVID 480
GLKLWEEM VRDLSPNVYTYAVLINALCKENRIQEARNFLR+LKLSE+VPKPFIYNPVID
Sbjct: 421 GLKLWEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSEIVPKPFIYNPVID 480
Query: 481 GFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIP 540
GFCKAGKVDEANVIVAEMQEKKC PDKITFTILIIGNCMKGRMVEAI++FYKMLET CIP
Sbjct: 481 GFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAINIFYKMLETKCIP 540
Query: 541 DEITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRSPLTRRKSSCVPVAV 596
DEITINSLISCLLKAGMP+EASQIKQAALE LN LLSL++PLT KSSCVPVA+
Sbjct: 541 DEITINSLISCLLKAGMPDEASQIKQAALEYLNFDLLSLKNPLT-IKSSCVPVAI 594
BLAST of Lcy08g019110 vs. TAIR 10
Match:
AT2G06000.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 569.7 bits (1467), Expect = 2.8e-162
Identity = 282/520 (54.23%), Postives = 379/520 (72.88%), Query Frame = 0
Query: 66 SIAQFYSFADGVSRARPFYD--REVIRNPEAWLVKVVCTLF-FRSHSSNACFGYLSRNLN 125
+IA F++ + G ++ARP + REVI PEAWLVK+V TLF +R S+ CF YLS+NLN
Sbjct: 9 AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68
Query: 126 PSIAFEVIKRF-RDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFDC 185
P I+FEV+K+ +P +G +F+EFSR L+I H+F TY+LL R+LC+ GLHD A +F+C
Sbjct: 69 PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128
Query: 186 MRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQ 245
M+SDG+ P++ ++ LVSS A+ GK+ A L + + ++ V N+LLN LVK ++
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188
Query: 246 VDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 305
V++A+ LF EHL D TFNILIRGLC +G+ +KA E M FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248
Query: 306 LINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSS 365
LI GFC+ NE++K ++ K+V+S SPDV+TYTS+ISGYCK G M+ AS L D+M+
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308
Query: 366 GIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQG 425
GI P + TFNVL+DG+ KAG+M +A + KM+ GC PDVVT TSLIDGYCR G+V QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368
Query: 426 LKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDG 485
+LWEEM R + PN +TY++LINALC ENR+ +AR L L +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428
Query: 486 FCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPD 545
FCKAGKV+EANVIV EM++KKC PDKITFTILIIG+CMKGRM EA+S+F+KM+ C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488
Query: 546 EITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRS 582
+IT++SL+SCLLKAGM EA + Q A + + ++ L +
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLET 526
BLAST of Lcy08g019110 vs. TAIR 10
Match:
AT2G06000.2 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 569.7 bits (1467), Expect = 2.8e-162
Identity = 282/520 (54.23%), Postives = 379/520 (72.88%), Query Frame = 0
Query: 66 SIAQFYSFADGVSRARPFYD--REVIRNPEAWLVKVVCTLF-FRSHSSNACFGYLSRNLN 125
+IA F++ + G ++ARP + REVI PEAWLVK+V TLF +R S+ CF YLS+NLN
Sbjct: 9 AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68
Query: 126 PSIAFEVIKRF-RDPLLGLKFFEFSRTHLSINHTFNTYDLLLRNLCQMGLHDSAKIVFDC 185
P I+FEV+K+ +P +G +F+EFSR L+I H+F TY+LL R+LC+ GLHD A +F+C
Sbjct: 69 PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128
Query: 186 MRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEVHCYGIKVSPFVYNNLLNMLVKQNQ 245
M+SDG+ P++ ++ LVSS A+ GK+ A L + + ++ V N+LLN LVK ++
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188
Query: 246 VDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 305
V++A+ LF EHL D TFNILIRGLC +G+ +KA E M FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248
Query: 306 LINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTSIISGYCKLGDMQAASELFDEMVSS 365
LI GFC+ NE++K ++ K+V+S SPDV+TYTS+ISGYCK G M+ AS L D+M+
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308
Query: 366 GIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQG 425
GI P + TFNVL+DG+ KAG+M +A + KM+ GC PDVVT TSLIDGYCR G+V QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368
Query: 426 LKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDG 485
+LWEEM R + PN +TY++LINALC ENR+ +AR L L +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428
Query: 486 FCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPD 545
FCKAGKV+EANVIV EM++KKC PDKITFTILIIG+CMKGRM EA+S+F+KM+ C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488
Query: 546 EITINSLISCLLKAGMPNEASQIKQAALENLNLGLLSLRS 582
+IT++SL+SCLLKAGM EA + Q A + + ++ L +
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLET 526
BLAST of Lcy08g019110 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 263.8 bits (673), Expect = 3.2e-70
Identity = 155/480 (32.29%), Postives = 257/480 (53.54%), Query Frame = 0
Query: 116 YLSRNLNPSIAFE-VIKRFRDPLLGLKFFEFSRTH--------------LSINHTFNTYD 175
+LS N P A ++K D L LKF ++ H L+ + T
Sbjct: 41 HLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQ 100
Query: 176 LLLRNLCQMGLHDS-AKIVFDCMRS--DGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEV 235
+L ++ L D A +VF ++ D + SS+ +L+V S +++ ID A +
Sbjct: 101 ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA 160
Query: 236 HCYGIKVSPFVYNNLLNMLVK-QNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGE 295
+G YN +L+ ++ + + A +F+E LE P+V+T+NILIRG C G
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 296 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYT 355
ID A F M GC P++V+YNTLI+G+C++ +I G LL+ + ++KG+ P++I+Y
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM-ALKGLEPNLISYN 280
Query: 356 SIISGYCKLGDMQAASELFDEMVSSGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLL 415
+I+G C+ G M+ S + EM G ++ T+N LI G+ K G+ ALVM+ +ML
Sbjct: 281 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 340
Query: 416 GCTPDVVTITSLIDGYCRAGEVHQGLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEA 475
G TP V+T TSLI C+AG +++ ++ ++M VR L PN TY L++ ++ + EA
Sbjct: 341 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 400
Query: 476 RNFLRYLKLSEVVPKPFIYNPVIDGFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIG 535
LR + + P YN +I+G C GK+++A ++ +M+EK SPD ++++ ++ G
Sbjct: 401 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 460
Query: 536 NCMKGRMVEAISLFYKMLETNCIPDEITINSLISCLLKAGMPNEASQIKQAALENLNLGL 577
C + EA+ + +M+E PD IT +SLI + EA + + E L +GL
Sbjct: 461 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE---EMLRVGL 516
BLAST of Lcy08g019110 vs. TAIR 10
Match:
AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 237.3 bits (604), Expect = 3.2e-62
Identity = 138/399 (34.59%), Postives = 215/399 (53.88%), Query Frame = 0
Query: 158 TYDLLLRNLCQMGLHDSAKIVFDCMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEV 217
TY+ ++ C++G + A + G+ PD L+ Q +DSA K +E+
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 218 HCYGIKVSPFVYNNLLNMLVKQNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEI 277
G + + Y +L++ L ++DEA+ LF + + P V T+ +LI+ LC
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339
Query: 278 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMKGVSPDVITYTS 337
+A + M G P+I +Y LI+ C + K +LL ++ KG+ P+VITY +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE-KGLMPNVITYNA 399
Query: 338 IISGYCKLGDMQAASELFDEMVSSGIKPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLG 397
+I+GYCK G ++ A ++ + M S + PN T+N LI G+ K+ ++ A+ + KML
Sbjct: 400 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERK 459
Query: 398 CTPDVVTITSLIDGYCRAGEVHQGLKLWEEMIVRDLSPNVYTYAVLINALCKENRIQEAR 457
PDVVT SLIDG CR+G +L M R L P+ +TY +I++LCK R++EA
Sbjct: 460 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 519
Query: 458 NFLRYLKLSEVVPKPFIYNPVIDGFCKAGKVDEANVIVAEMQEKKCSPDKITFTILIIGN 517
+ L+ V P +Y +IDG+CKAGKVDEA++++ +M K C P+ +TF LI G
Sbjct: 520 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 579
Query: 518 CMKGRMVEAISLFYKMLETNCIPDEITINSLISCLLKAG 557
C G++ EA L KM++ P T LI LLK G
Sbjct: 580 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
BLAST of Lcy08g019110 vs. TAIR 10
Match:
AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 235.3 bits (599), Expect = 1.2e-61
Identity = 142/433 (32.79%), Postives = 209/433 (48.27%), Query Frame = 0
Query: 158 TYDLLLRNLCQMGLHDSAKIVFDCMRSDGIFPDSSIVELLVSSSAQMGKIDSAKKFLDEV 217
T+ L+ LC G A + D M G PD + LV+ GK A +D++
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 218 HCYGIKVSPFVYNNLLNMLVKQNQVDEAVLLFREHLEPYFIPDVYTFNILIRGLCRIGEI 277
YG + + Y +LN++ K Q A+ L R+ E D ++I+I GLC+ G +
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 278 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSMK----------- 337
D AF F M G +I++YN LI GFC G LL+++ K
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 338 -----------------------GVSPDVITYTSIISGYCKLGDMQAASELFDEMVSSGI 397
G++PD ITYTS+I G+CK + A+++ D MVS G
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 398 KPNDFTFNVLIDGFGKAGDMRSALVMYEKMLLLGCTPDVVTITSLIDGYCRAGEVHQGLK 457
PN TFN+LI+G+ KA + L ++ KM L G D VT +LI G+C G+++ +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 458 LWEEMIVRDLSPNVYTYAVLINALCKENRIQEARNFLRYLKLSEVVPKPFIYNPVIDGFC 517
L++EM+ R + PN+ TY +L++ LC ++A ++ S++ IYN +I G C
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 518 KAGKVDEANVIVAEMQEKKCSPDKITFTILIIGNCMKGRMVEAISLFYKMLETNCIPDEI 557
A KVD+A + + K P T+ I+I G C KG + EA LF KM E PD
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9ZUE9 | 3.9e-161 | 54.23 | Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 4.5e-69 | 32.29 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q9LSL9 | 4.6e-61 | 34.59 | Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX... | [more] |
Q0WKV3 | 1.7e-60 | 32.79 | Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... | [more] |
Q9LFF1 | 6.6e-60 | 30.23 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G470 | 0.0e+00 | 90.92 | pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1KES2 | 0.0e+00 | 90.59 | pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita ma... | [more] |
A0A6J1DMW0 | 0.0e+00 | 90.08 | pentatricopeptide repeat-containing protein At2g06000 OS=Momordica charantia OX=... | [more] |
A0A1S3CB42 | 2.6e-301 | 88.44 | pentatricopeptide repeat-containing protein At2g06000 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5A7V6K1 | 2.6e-301 | 88.44 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
KAG7030515.1 | 0.0e+00 | 90.76 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023546864.1 | 0.0e+00 | 90.76 | pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita pepo... | [more] |
XP_038890050.1 | 0.0e+00 | 91.43 | pentatricopeptide repeat-containing protein At2g06000 [Benincasa hispida] | [more] |
XP_022946631.1 | 0.0e+00 | 90.92 | pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita mosc... | [more] |
XP_022999210.1 | 0.0e+00 | 90.59 | pentatricopeptide repeat-containing protein At2g06000 isoform X1 [Cucurbita maxi... | [more] |
Match Name | E-value | Identity | Description | |
AT2G06000.1 | 2.8e-162 | 54.23 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G06000.2 | 2.8e-162 | 54.23 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 3.2e-70 | 32.29 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G65560.1 | 3.2e-62 | 34.59 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G12300.1 | 1.2e-61 | 32.79 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |