Lcy08g018240 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g018240
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein SPEAR1
Location	Chr08: 48948937 .. 48952071 (+)
RNA-Seq Expression	Lcy08g018240
Synteny	Lcy08g018240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGACTGTGAAAAAGAGCTTAAAAAGAGGGCTTTAGAGATCTCTGGTTTCTCAGATTGCCGGCCAGCAAAACAAAGCCATCCCACTTTCTCTCTCTAGTTTTTTTAATTTTTGTTTCTCTCTCTAAGATTTTTTTTTTTGGAGATAATATGGGGAGTGGTTATTTTGGGGAGATGAATATGGGGAATACTGATAAGAGGAGGAGTGGGTCGCCGGCGGCGGCGGCGACAGGGCGGAGAGGGAGGAAGGGCGGCGGCGGAGAGAAACCGAAACAGCCGCAGAGAGGGTTGGGAGTTGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGCTGTGCTGCTTATGGCCACTTGTATCCAAATCTCTCCGCCGTAAATCTCTCTCTCTCTCGTTTCTCTTTGCTTCTCTCGTGGAATTCATATTGGTGATTTTTTTTTTCTCATGAGTTATGAAGCTTGATTTTTTTTTTTTTTTGGGTTTGGTTTTTGTTTCTTCATGTGAGAAATTATTTTTAAGGAACTGTGGCCGACAATTTTATACCGTTGAAAGTATGACACTGATAATTTTATGTTGGGAGACCGTAAAATTTCAAGTTAAAATATATATTTTCAATCAAAAGATTAAGAGTTCGAATTCTTCTCTTTGAACTAAAAACAAATTATATGTTAAAAAAAAACAAACAAATTATATGTTTGAATCATAGGTGGATTAGGGTGAATATTTTTTCTTCATTGTTCTTCTCTCCTCTCCTCTTCTGTCTCATGGTTTCAGCTAGCATTTCATGGCAATTTCCATTATGGAGTTTGATGAATTTAAAAAAAAAAAAAAAAATCTTCCTCTCTTCTCTCTTTAAGGAATTAGAAATTTTCACAATTAGACCTTTTAATTAACTTATATATATATAATGGTTCAATTCCTAAAATTTAGGAGAATTAATTTGAGGAGATGGGTTTTTTTTTTTTTTTTTTTTTTTTTCTCTAAATAAAAATATTTCACTTTTCATTAAAAAAAAAAACAAAAAAAATTAAGATGAAAGAAGCAATTGCCTCTCCTTCCTTCTGTATATCGAGGCTTACTATTTAATGACAATTTTTTTTTTCATTGGGGATTTGGTTTTTTTCTTTTTTTTCTTTTTTGGGATTATTTAATTTCGGATTTTCTTCTTTCTCATGGTTTGGAATTGCATTTTAATGGCGGTTTCTTTCAATGGCTGAGCTGATATGATTTGGGTTTATTATTTTGTTTTCATGAAGAGCGATGATATGAGAATGCAAACAGCAGCTTCTTCTTTTTCTTACTCCACAACTCAATCTTCTTCTTCATCTCCTTCCTATGGCTTCCATCAAAACTTTATGGTAACTCTCTCTCTTTAGAATTTCCGTCGATTTTATATTTTAAAATATTACATTACATGTGGATTCGAATCTACGACACCTCCTTTAAAAAAAGTAAAAATACTTTAATTGTTGAGCTATGTTCGCCTGCAACTTTTGTGTAATTTCAAATGAAACGAATGATAGATATGAGTGCTTTGAAAAAAGATCGAATCTCTTGATCTCAAATAGTTCCGATTTTGGAGTTTCATCAAATTAAGAAAAAAAAAAAATCAAAGCTTTGTTCTAAAAAAAAATCACATTAATCATAAAAGGAATTGGATTTGGTTTATAGAGAGATTATAAAAGTTTGATTAATTATTGAATAAATTAGAGATTTTGTCTTTAATTATGTTTGTTATCAATAGTTCTCTTTTGTTTAATTTTTTTTACTTTAAATGGATCCCAGGGAATGGGAGAATATGAAAGAGGAAGCTTCAGATATGGGGATTCTCAGCCAACAACAACTTCTATAAGGTAAAGCTTTATTTATTTATTCCTTCTTCTTATTATTATTTTGTTGTAAGATTATAGAGTAAAATTTAGACCCTTCATTTTATTTTTCCATTAACATTAATTAATTTTGTGAATTGTGATATTTTAGATGGGACCCAAGTAATACATTCCTGGAGACCCAACATTTTGGGCAACCAAACATGACTGGACACCTTTTCAATCCTCATGTACAGGTTAGTAGTTAGTACATTCTCTTTAATTAATTAACTTAATCTTAATGTGTTTTTACACAAATTTGTTTGCTTTTTTTCATTTTTTTTTAAAAATTTGAACTTCCCGAGACTTCTTGGTCGAAGGTATATGTTTGGGGATCCCATATTGTAAAGATAAGTGGAGATCTCATAATTTATAAGATACATGAGTTACTCCACTCATTGTTAATTGGTTTTGAATAATGAAACCCCAAGTTTATCTATCATGGTATCAGAACCCATGAAATGCAAACGGGTATTCGGTCAAGGAAAAAAATAATTGGAATCCAAGGAGGCAAAAAAATTCATATTTATGTTAATATGACTTGGATAGAGTTATTTTTGTGAGAAACATTAATGTTAGGATTTTTCTAACCTTTGAGGGTAAGGATTCGAATGTCTAACTTTTTGGTTGAGGATATATATGTCTGGCATCGTCATATTGAGAGTTATTTGTATTTGACTTGTTGCTGCTTCTTAACTATATCGTAATGTTTCTACTGTTGTTTTGTCATATCTATCGTGACTCGTATTATTGATTAGTCGATACGGATCATTATAATATTGTTAAGAAGTTGAAACTTTTATAGAGTAATGACATAGAAATGTGACAAAATTTTTGCATGAAATGTGTGGAAAATGCAGGATTCAATGCACAAGAACATGAATACAAAATATGGGAGTGATTCAATTGGTTCAAGCAGTCAGAATTCTGAATCAAGTGAGACTCAAGAGCTAGATTTGGAGCTGAGATTGTCAATCTAAGAAAGGCTGGGTTTCAATCAATCAATTTCCCAACATTATATAAATAATTATAAACTGCATTAATCCTGTAATTTTACCTATTTTATGAACCAGGCCCTCAAGTTTTAAGAATTGTTTCAAATAGCTCTTTTAGTTTGTACATTTGCAAACCATACCCTTTATTGTCAAGTTTAAGTTCAGCAGAATAATTGATACATTTTGATAAAAGGGTATGGTTTTTTTGAGATGTTTGAGACTATTATAAACAGAGAATTCAAGGGTGTGATTTGTAAAATGGGCAAATCATAG

mRNA sequence

GGGACTGTGAAAAAGAGCTTAAAAAGAGGGCTTTAGAGATCTCTGGTTTCTCAGATTGCCGGCCAGCAAAACAAAGCCATCCCACTTTCTCTCTCTAGTTTTTTTAATTTTTGTTTCTCTCTCTAAGATTTTTTTTTTTGGAGATAATATGGGGAGTGGTTATTTTGGGGAGATGAATATGGGGAATACTGATAAGAGGAGGAGTGGGTCGCCGGCGGCGGCGGCGACAGGGCGGAGAGGGAGGAAGGGCGGCGGCGGAGAGAAACCGAAACAGCCGCAGAGAGGGTTGGGAGTTGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGCTGTGCTGCTTATGGCCACTTGTATCCAAATCTCTCCGCCAGCGATGATATGAGAATGCAAACAGCAGCTTCTTCTTTTTCTTACTCCACAACTCAATCTTCTTCTTCATCTCCTTCCTATGGCTTCCATCAAAACTTTATGGGAATGGGAGAATATGAAAGAGGAAGCTTCAGATATGGGGATTCTCAGCCAACAACAACTTCTATAAGATGGGACCCAAGTAATACATTCCTGGAGACCCAACATTTTGGGCAACCAAACATGACTGGACACCTTTTCAATCCTCATGTACAGGATTCAATGCACAAGAACATGAATACAAAATATGGGAGTGATTCAATTGGTTCAAGCAGTCAGAATTCTGAATCAAGTGAGACTCAAGAGCTAGATTTGGAGCTGAGATTGTCAATCTAAGAAAGGCTGGGTTTCAATCAATCAATTTCCCAACATTATATAAATAATTATAAACTGCATTAATCCTGTAATTTTACCTATTTTATGAACCAGGCCCTCAAGTTTTAAGAATTGTTTCAAATAGCTCTTTTAGTTTGTACATTTGCAAACCATACCCTTTATTGTCAAGTTTAAGTTCAGCAGAATAATTGATACATTTTGATAAAAGGGTATGGTTTTTTTGAGATGTTTGAGACTATTATAAACAGAGAATTCAAGGGTGTGATTTGTAAAATGGGCAAATCATAG

Coding sequence (CDS)

ATGGGGAGTGGTTATTTTGGGGAGATGAATATGGGGAATACTGATAAGAGGAGGAGTGGGTCGCCGGCGGCGGCGGCGACAGGGCGGAGAGGGAGGAAGGGCGGCGGCGGAGAGAAACCGAAACAGCCGCAGAGAGGGTTGGGAGTTGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGCTGTGCTGCTTATGGCCACTTGTATCCAAATCTCTCCGCCAGCGATGATATGAGAATGCAAACAGCAGCTTCTTCTTTTTCTTACTCCACAACTCAATCTTCTTCTTCATCTCCTTCCTATGGCTTCCATCAAAACTTTATGGGAATGGGAGAATATGAAAGAGGAAGCTTCAGATATGGGGATTCTCAGCCAACAACAACTTCTATAAGATGGGACCCAAGTAATACATTCCTGGAGACCCAACATTTTGGGCAACCAAACATGACTGGACACCTTTTCAATCCTCATGTACAGGATTCAATGCACAAGAACATGAATACAAAATATGGGAGTGATTCAATTGGTTCAAGCAGTCAGAATTCTGAATCAAGTGAGACTCAAGAGCTAGATTTGGAGCTGAGATTGTCAATCTAA

Protein sequence

MGSGYFGEMNMGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAAYGHLYPNLSASDDMRMQTAASSFSYSTTQSSSSSPSYGFHQNFMGMGEYERGSFRYGDSQPTTTSIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSMHKNMNTKYGSDSIGSSSQNSESSETQELDLELRLSI

Homology

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BLAST of Lcy08g018240 vs. ExPASy Swiss-Prot
Match: Q6IDB0 (Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-28
Identity = 91/208 (43.75%), Postives = 121/208 (58.17%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGS +FG   MG +    S + ++++  +RG+   G +KPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSSFFGRPKMGGSSS-SSPTSSSSSPAKRGKNKNGSDKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAAYGHLYPNLSAS---DDMRMQ-----TAASSFSYSTTQSSSSSPSYGFHQNFM--- 120
             C ++ + YP+   S   +D+R+Q       +SS S+S   SS     YGFH N M   
Sbjct: 61  YNCNSF-NTYPSYHPSTYQEDVRIQGGYPSIPSSSPSFSYASSSPPPAPYGFHPNMMMNA 120

Query: 121 GMGEYERGSFRYGDSQPTTTSIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSMHKNMNT 180
              +YER + RYGDSQP      W+PS   LE+QHF +PN T H         +H++   
Sbjct: 121 NNDQYERTTIRYGDSQPHRAP-SWNPSYGILESQHFVEPNTTRHF--------LHEDQR- 180

Query: 181 KYGSDSIGSSSQNSESSETQELDLELRL 198
              + S+GS  QN E+SE  ELDLELRL
Sbjct: 181 ---NISLGSGIQNFETSEANELDLELRL 193

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BLAST of Lcy08g018240 vs. ExPASy Swiss-Prot
Match: Q84X40 (Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-26
Identity = 86/200 (43.00%), Postives = 116/200 (58.00%), Query Frame = 0


Query: 1   MGSGYFGEMN-MGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHG 60
           MGS +FG  N +G++    S + ++++   R  K  G EKPKQPQRGLGVAQLEKIRLHG
Sbjct: 1   MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKNGSEKPKQPQRGLGVAQLEKIRLHG 60

Query: 61  EMGCAAYGHLYPNLSASDDMRMQTAASSFSYSTTQSSSSSPSYGFHQNFMGMGEYERGSF 120
           EM C ++    P+L   +D+RMQ       YS+  S SS+P YGF+ N M MG +     
Sbjct: 61  EMSCNSFNSYNPSLYPQEDVRMQG-----GYSSIPSQSSAP-YGFYPNMM-MGVHR---- 120

Query: 121 RYGDSQPTTTSIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSMHKNMNTKYGSDSIGSS 180
                Q    ++ W+PS   LE+QH  +PN+T H  N     +  +       S S+GS 
Sbjct: 121 ----DQYDRATMSWNPSYGILESQHSLEPNITRHFLNEDPSSTTRR-------SKSLGSG 178

Query: 181 SQNSESSETQELDLELRLSI 200
            Q+S SSE QE+DLELRLS+
Sbjct: 181 IQHSGSSENQEVDLELRLSL 178

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BLAST of Lcy08g018240 vs. ExPASy TrEMBL
Match: A0A1S3C7M3 (protein SPEAR1 OS=Cucumis melo OX=3656 GN=LOC103497912 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 9.2e-86
Identity = 179/203 (88.18%), Postives = 186/203 (91.63%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGSGYFGEMN  N +KRRSGSPAAA  GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSGYFGEMN--NIEKRRSGSPAAAG-GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAAYGHLYPNLSASDDMRMQTAA-SSFSYSTTQSSSSSP-SYGFHQNFMGMGEYERGS 120
           MGCAAY H YPNLSA DDMRMQT   S+FSYS+TQSSSSSP SYGFHQNFMGMGEYERGS
Sbjct: 61  MGCAAYSHFYPNLSAGDDMRMQTTTPSNFSYSSTQSSSSSPNSYGFHQNFMGMGEYERGS 120

Query: 121 FRYGDSQPTTT-SIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDS-MHKNMNTKYGSDSI 180
           FRYGDSQ TTT S+RWDPSNTFLETQHFGQPNM+GHLFN HVQDS +H NMNTKYGSDS+
Sbjct: 121 FRYGDSQLTTTSSLRWDPSNTFLETQHFGQPNMSGHLFNSHVQDSIIHNNMNTKYGSDSM 180

Query: 181 GSSSQNSESSETQELDLELRLSI 200
           GSSSQNSESSETQELDLELRLSI
Sbjct: 181 GSSSQNSESSETQELDLELRLSI 200

[Close]

BLAST of Lcy08g018240 vs. ExPASy TrEMBL
Match: A0A0A0LFV0 (SPOROCYTELESS-like EAR-containing protein 1 OS=Cucumis sativus OX=3659 GN=SPEAR1 PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 8.6e-84
Identity = 176/204 (86.27%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGSGYFGEMN  N +KRRSGSP+AA  GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSGYFGEMN--NIEKRRSGSPSAAG-GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAAYGHLYPNLSASDDMRMQTAAS-SFSYSTT-QSSSSSP-SYGFHQNFMGMGEYERG 120
           MGCAAY H YPNLSA DD RMQT  + +FSYS+T +SS+SSP SYGFHQNFMGMGEYERG
Sbjct: 61  MGCAAYSHFYPNLSAGDDRRMQTTTTPNFSYSSTHESSASSPNSYGFHQNFMGMGEYERG 120

Query: 121 SFRYGDSQPTTT-SIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSM-HKNMNTKYGSDS 180
           SFRYGDSQ TTT S+RWDPSNTFLETQHFGQPNM+GHLFNPHVQDSM HKN+NTKYGSDS
Sbjct: 121 SFRYGDSQLTTTSSLRWDPSNTFLETQHFGQPNMSGHLFNPHVQDSMIHKNINTKYGSDS 180

Query: 181 IGSSSQNSESSETQELDLELRLSI 200
           +GSSSQNSESSETQELDLELRLSI
Sbjct: 181 MGSSSQNSESSETQELDLELRLSI 201

[Close]

BLAST of Lcy08g018240 vs. ExPASy TrEMBL
Match: A0A6J1HQB1 (protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111465705 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.2e-73
Identity = 152/199 (76.38%), Postives = 155/199 (77.89%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGSGYFGEMNMGN DKRRSGSPAAAA GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSGYFGEMNMGNIDKRRSGSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAAYGHLYPNLSASDDMRMQTAASSFSYSTTQSSSSSPSYGFHQNFMGMGEYERGSFR 120
           MGCA YGH YPNLSA                                  GMGEYERGSFR
Sbjct: 61  MGCAGYGHFYPNLSA----------------------------------GMGEYERGSFR 120

Query: 121 YGDSQPTTTSIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSMHKNMNTKYGSDSIGSSS 180
           YGDSQPTTTSIRW+ SNT +ETQHFG+PNMTGHL NP V DSMHKNMNTKYGSDSIGSSS
Sbjct: 121 YGDSQPTTTSIRWNMSNTSMETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSS 165

Query: 181 QNSESSETQELDLELRLSI 200
           QNSESSET ELDLELRLSI
Sbjct: 181 QNSESSETHELDLELRLSI 165

[Close]

BLAST of Lcy08g018240 vs. ExPASy TrEMBL
Match: A0A6J1KB48 (protein SPEAR3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493868 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.4e-72
Identity = 158/201 (78.61%), Postives = 166/201 (82.59%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNT--DKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLH 60
           MGSGYFGEMNMGN   DKRRSGS   AA  RRGRKGGGGEKPKQPQRGLGVAQLEKIRLH
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGS---AAVVRRGRKGGGGEKPKQPQRGLGVAQLEKIRLH 60

Query: 61  GEMGCAAYGHLYPNLSASDDMRMQTAASSFSYSTTQSSSSSPSYGFHQNFMGMGEYERGS 120
           GEMGCAAYGH YP LSASDDMR++TA           SSSSPSYGFHQNFMGMGE+ERGS
Sbjct: 61  GEMGCAAYGHPYPYLSASDDMRIETA-----------SSSSPSYGFHQNFMGMGEHERGS 120

Query: 121 FRYGDSQPTTTSIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSMHKNMNTKYGSDSIGS 180
            R GDSQP TTS+RWDPS+TFLET HFGQPNMTGHLFN HVQDS+  N+N KYGSDS+  
Sbjct: 121 LRCGDSQP-TTSLRWDPSHTFLETHHFGQPNMTGHLFNTHVQDSIQGNINVKYGSDSMRL 180

Query: 181 SSQNSESSETQELDLELRLSI 200
           S QNSESS   ELDLELRLSI
Sbjct: 181 SRQNSESS---ELDLELRLSI 183

[Close]

BLAST of Lcy08g018240 vs. ExPASy TrEMBL
Match: A0A6J1FCT6 (protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111444227 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.8e-71
Identity = 150/199 (75.38%), Postives = 153/199 (76.88%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGSGYFGEMNMGN DKRRS SPAAAA GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAAYGHLYPNLSASDDMRMQTAASSFSYSTTQSSSSSPSYGFHQNFMGMGEYERGSFR 120
           MGCA YGH YP LSA                                  GMGEYERGSFR
Sbjct: 61  MGCAGYGHFYPTLSA----------------------------------GMGEYERGSFR 120

Query: 121 YGDSQPTTTSIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSMHKNMNTKYGSDSIGSSS 180
           YGDSQPTTTSIRW+ SNT LETQHFG+PNMTGHL NP V DSMHKNMNTKYGSDSIGSSS
Sbjct: 121 YGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSS 165

Query: 181 QNSESSETQELDLELRLSI 200
           QNS+SSET ELDLELRLSI
Sbjct: 181 QNSKSSETHELDLELRLSI 165

[Close]

BLAST of Lcy08g018240 vs. NCBI nr
Match: XP_038889470.1 (protein SPEAR1-like [Benincasa hispida])

HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88
Identity = 181/207 (87.44%), Postives = 189/207 (91.30%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNT---DKRRSGSP---AAAATGRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGSGYFGEMNMGN    +KRRSGSP   AAA TGRRGRKG GGEKPKQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEMNMGNNNNIEKRRSGSPATGAAAGTGRRGRKGSGGEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAY-GHLYPNLSASDDMRMQTAASSFSYSTTQSSSSSPS-YGFHQNFMGMG 120
           IRLHGEMGCAAY GH YPNLSA DDMRMQT A SFSYS+TQSSSSSP+ Y FHQNFMG+G
Sbjct: 61  IRLHGEMGCAAYSGHFYPNLSAGDDMRMQTTA-SFSYSSTQSSSSSPNFYAFHQNFMGIG 120

Query: 121 EYERGSFRYGDSQPTTTSIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSMHKNMNTKYG 180
           EYERGS RYGDSQPTT+S RWDPSNTFLETQHFGQPNMTGHLFNPHVQDS+HKNMNTKYG
Sbjct: 121 EYERGSLRYGDSQPTTSSFRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSIHKNMNTKYG 180

Query: 181 SDSIGSSSQNSESSETQELDLELRLSI 200
           SDS+GSSSQNSESSET+ELDLELRLSI
Sbjct: 181 SDSMGSSSQNSESSETRELDLELRLSI 206

[Close]

BLAST of Lcy08g018240 vs. NCBI nr
Match: XP_008458547.1 (PREDICTED: protein SPEAR1 [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 1.9e-85
Identity = 179/203 (88.18%), Postives = 186/203 (91.63%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGSGYFGEMN  N +KRRSGSPAAA  GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSGYFGEMN--NIEKRRSGSPAAAG-GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAAYGHLYPNLSASDDMRMQTAA-SSFSYSTTQSSSSSP-SYGFHQNFMGMGEYERGS 120
           MGCAAY H YPNLSA DDMRMQT   S+FSYS+TQSSSSSP SYGFHQNFMGMGEYERGS
Sbjct: 61  MGCAAYSHFYPNLSAGDDMRMQTTTPSNFSYSSTQSSSSSPNSYGFHQNFMGMGEYERGS 120

Query: 121 FRYGDSQPTTT-SIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDS-MHKNMNTKYGSDSI 180
           FRYGDSQ TTT S+RWDPSNTFLETQHFGQPNM+GHLFN HVQDS +H NMNTKYGSDS+
Sbjct: 121 FRYGDSQLTTTSSLRWDPSNTFLETQHFGQPNMSGHLFNSHVQDSIIHNNMNTKYGSDSM 180

Query: 181 GSSSQNSESSETQELDLELRLSI 200
           GSSSQNSESSETQELDLELRLSI
Sbjct: 181 GSSSQNSESSETQELDLELRLSI 200

[Close]

BLAST of Lcy08g018240 vs. NCBI nr
Match: XP_011648648.1 (protein SPEAR1 [Cucumis sativus] >KGN60603.1 hypothetical protein Csa_019375 [Cucumis sativus] >QBL95714.1 SPOROCYTELESS-like EAR-containing protein 1 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 1.8e-83
Identity = 176/204 (86.27%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGSGYFGEMN  N +KRRSGSP+AA  GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSGYFGEMN--NIEKRRSGSPSAAG-GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAAYGHLYPNLSASDDMRMQTAAS-SFSYSTT-QSSSSSP-SYGFHQNFMGMGEYERG 120
           MGCAAY H YPNLSA DD RMQT  + +FSYS+T +SS+SSP SYGFHQNFMGMGEYERG
Sbjct: 61  MGCAAYSHFYPNLSAGDDRRMQTTTTPNFSYSSTHESSASSPNSYGFHQNFMGMGEYERG 120

Query: 121 SFRYGDSQPTTT-SIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSM-HKNMNTKYGSDS 180
           SFRYGDSQ TTT S+RWDPSNTFLETQHFGQPNM+GHLFNPHVQDSM HKN+NTKYGSDS
Sbjct: 121 SFRYGDSQLTTTSSLRWDPSNTFLETQHFGQPNMSGHLFNPHVQDSMIHKNINTKYGSDS 180

Query: 181 IGSSSQNSESSETQELDLELRLSI 200
           +GSSSQNSESSETQELDLELRLSI
Sbjct: 181 MGSSSQNSESSETQELDLELRLSI 201

[Close]

BLAST of Lcy08g018240 vs. NCBI nr
Match: XP_023522169.1 (protein SPEAR1-like [Cucurbita pepo subsp. pepo] >XP_023547325.1 protein SPEAR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-75
Identity = 163/206 (79.13%), Postives = 175/206 (84.95%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNT--DKRRSGSPAAAA----TGRRGRK-GGGGEKPKQPQRGLGVAQLE 60
           MGSGYFGEMNMGN   DKRRSGSP++AA      RRGRK GGGGEKPKQPQRGLGVAQLE
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGSPSSAAAVATVVRRGRKGGGGGEKPKQPQRGLGVAQLE 60

Query: 61  KIRLHGEMGCAAYGHLYPNLSASDDMRMQTAASSFSYSTTQSSSSSPSYGFHQNFMGMGE 120
           KIRLHGEMGCAAYGHLYPNLSASDDMR++TA           SSSSPSYGFHQNFMGMGE
Sbjct: 61  KIRLHGEMGCAAYGHLYPNLSASDDMRIETA-----------SSSSPSYGFHQNFMGMGE 120

Query: 121 YERGSFRYGDSQPTTTSIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSMHKNMNTKYGS 180
           +ERGSF YGDSQP  TS+RWDP++TFLETQHFGQPNMTGHLFN H+QDS+H N+N KYGS
Sbjct: 121 HERGSFGYGDSQP-ITSLRWDPTHTFLETQHFGQPNMTGHLFNTHLQDSIHGNINVKYGS 180

Query: 181 DSIGSSSQNSESSETQELDLELRLSI 200
           DS+ SSSQNSESS   ELDLELRLSI
Sbjct: 181 DSMTSSSQNSESS---ELDLELRLSI 191

[Close]

BLAST of Lcy08g018240 vs. NCBI nr
Match: XP_023537409.1 (protein SPEAR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 6.4e-73
Identity = 153/199 (76.88%), Postives = 155/199 (77.89%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGSGYFGEMNMGN DKRRSGSPAAAA GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSGYFGEMNMGNIDKRRSGSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAAYGHLYPNLSASDDMRMQTAASSFSYSTTQSSSSSPSYGFHQNFMGMGEYERGSFR 120
           MGCA YGH YPNLSA                                  GMGEYERGSFR
Sbjct: 61  MGCAGYGHFYPNLSA----------------------------------GMGEYERGSFR 120

Query: 121 YGDSQPTTTSIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSMHKNMNTKYGSDSIGSSS 180
           YGDSQPTTTSIRW+ SNT LETQHFG+PNMTGHL NP V DSMHKNMNTKYGSDSIGSSS
Sbjct: 121 YGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSS 165

Query: 181 QNSESSETQELDLELRLSI 200
           QNSESSET ELDLELRLSI
Sbjct: 181 QNSESSETHELDLELRLSI 165

[Close]

BLAST of Lcy08g018240 vs. TAIR 10
Match: AT4G28840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20080.1); Has 71 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-29
Identity = 91/208 (43.75%), Postives = 121/208 (58.17%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGE 60
           MGS +FG   MG +    S + ++++  +RG+   G +KPKQPQRGLGVAQLEKIRLHGE
Sbjct: 1   MGSSFFGRPKMGGSSS-SSPTSSSSSPAKRGKNKNGSDKPKQPQRGLGVAQLEKIRLHGE 60

Query: 61  MGCAAYGHLYPNLSAS---DDMRMQ-----TAASSFSYSTTQSSSSSPSYGFHQNFM--- 120
             C ++ + YP+   S   +D+R+Q       +SS S+S   SS     YGFH N M   
Sbjct: 61  YNCNSF-NTYPSYHPSTYQEDVRIQGGYPSIPSSSPSFSYASSSPPPAPYGFHPNMMMNA 120

Query: 121 GMGEYERGSFRYGDSQPTTTSIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSMHKNMNT 180
              +YER + RYGDSQP      W+PS   LE+QHF +PN T H         +H++   
Sbjct: 121 NNDQYERTTIRYGDSQPHRAP-SWNPSYGILESQHFVEPNTTRHF--------LHEDQR- 180

Query: 181 KYGSDSIGSSSQNSESSETQELDLELRL 198
              + S+GS  QN E+SE  ELDLELRL
Sbjct: 181 ---NISLGSGIQNFETSEANELDLELRL 193

[Close]

BLAST of Lcy08g018240 vs. TAIR 10
Match: AT2G20080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 121.3 bits (303), Expect = 8.7e-28
Identity = 86/200 (43.00%), Postives = 116/200 (58.00%), Query Frame = 0


Query: 1   MGSGYFGEMN-MGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHG 60
           MGS +FG  N +G++    S + ++++   R  K  G EKPKQPQRGLGVAQLEKIRLHG
Sbjct: 1   MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKNGSEKPKQPQRGLGVAQLEKIRLHG 60

Query: 61  EMGCAAYGHLYPNLSASDDMRMQTAASSFSYSTTQSSSSSPSYGFHQNFMGMGEYERGSF 120
           EM C ++    P+L   +D+RMQ       YS+  S SS+P YGF+ N M MG +     
Sbjct: 61  EMSCNSFNSYNPSLYPQEDVRMQG-----GYSSIPSQSSAP-YGFYPNMM-MGVHR---- 120

Query: 121 RYGDSQPTTTSIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSMHKNMNTKYGSDSIGSS 180
                Q    ++ W+PS   LE+QH  +PN+T H  N     +  +       S S+GS 
Sbjct: 121 ----DQYDRATMSWNPSYGILESQHSLEPNITRHFLNEDPSSTTRR-------SKSLGSG 178

Query: 181 SQNSESSETQELDLELRLSI 200
            Q+S SSE QE+DLELRLS+
Sbjct: 181 IQHSGSSENQEVDLELRLSL 178

[Close]

BLAST of Lcy08g018240 vs. TAIR 10
Match: AT2G20080.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-20
Identity = 73/200 (36.50%), Postives = 101/200 (50.50%), Query Frame = 0


Query: 1   MGSGYFGEMN-MGNTDKRRSGSPAAAATGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHG 60
           MGS +FG  N +G++    S + ++++   R  K  G EKPKQPQRGLGVAQLEKIRLHG
Sbjct: 1   MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKNGSEKPKQPQRGLGVAQLEKIRLHG 60

Query: 61  EMGCAAYGHLYPNLSASDDMRMQTAASSFSYSTTQSSSSSPSYGFHQNFMGMGEYERGSF 120
           EM C ++    P+L                          P  G H++     +Y+R   
Sbjct: 61  EMSCNSFNSYNPSL-------------------------YPQMGVHRD-----QYDR--- 120

Query: 121 RYGDSQPTTTSIRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSMHKNMNTKYGSDSIGSS 180
                     ++ W+PS   LE+QH  +PN+T H  N     +  +       S S+GS 
Sbjct: 121 ---------ATMSWNPSYGILESQHSLEPNITRHFLNEDPSSTTRR-------SKSLGSG 151

Query: 181 SQNSESSETQELDLELRLSI 200
            Q+S SSE QE+DLELRLS+
Sbjct: 181 IQHSGSSENQEVDLELRLSL 151

The following BLAST results are available for this feature:

BLAST of Lcy08g018240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IDB0	2.2e-28	43.75	Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1	[more]
Q84X40	1.2e-26	43.00	Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1	[more]

BLAST of Lcy08g018240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7M3	9.2e-86	88.18	protein SPEAR1 OS=Cucumis melo OX=3656 GN=LOC103497912 PE=4 SV=1	[more]
A0A0A0LFV0	8.6e-84	86.27	SPOROCYTELESS-like EAR-containing protein 1 OS=Cucumis sativus OX=3659 GN=SPEAR1...	[more]
A0A6J1HQB1	5.2e-73	76.38	protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111465705 PE=4 SV=1	[more]
A0A6J1KB48	3.4e-72	78.61	protein SPEAR3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493868 PE=4 ...	[more]
A0A6J1FCT6	3.8e-71	75.38	protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111444227 PE=4 SV=1	[more]

BLAST of Lcy08g018240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889470.1	1.1e-88	87.44	protein SPEAR1-like [Benincasa hispida]	[more]
XP_008458547.1	1.9e-85	88.18	PREDICTED: protein SPEAR1 [Cucumis melo]	[more]
XP_011648648.1	1.8e-83	86.27	protein SPEAR1 [Cucumis sativus] >KGN60603.1 hypothetical protein Csa_019375 [Cu...	[more]
XP_023522169.1	1.8e-75	79.13	protein SPEAR1-like [Cucurbita pepo subsp. pepo] >XP_023547325.1 protein SPEAR1-...	[more]
XP_023537409.1	6.4e-73	76.88	protein SPEAR1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy08g018240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28840.1	1.6e-29	43.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.1	8.7e-28	43.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.2	2.3e-20	36.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR33388:SF18	PROTEIN SPEAR1	coord: 1..199
IPR040356	SPEAR family	PANTHER	PTHR33388	OS01G0212500 PROTEIN	coord: 1..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g018240.1	Lcy08g018240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity