Lcy08g015870 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGACATTTTAGCTGATGATATAATGCATTAATCAGTTGAGCTATGCTTTAGGTTGCTCAGATTGGTAGCTACAGTAAGTTTAATCTTTAATCAATACTTTAACACTTCCATTTAGACACAGTTTGATTAGTTGTTAGCTTCCTGGGTAAAGTAAAACTAGATTCCTTTCAATCCTCGGTCAATTCAAGAACTTAACGTGCAATTACAAGGCTGAAGCCCTGAGCTTTTAACATATGCTGGCTAAAAAGTCTAGACAGATTGGTGGATTGGCTAGTCTGAATTTCCTATATAAACCATTTAGAATAGAGAGAAAAACCCCAAGGTCTCTAAGGCATAAAGAGTAGATCACACTCATTTAGGCTATGGCCGATTTTCGCTCCGGTTTCTTTTGTCGCCCCGACAACAAGAAGATCGGATCACGTCCCGAAGAAAATAGCAAAACAAGCCTTGTCATCCCTGACCATAAATGCAAGCCAACTCGTGTCGATGCAGACGAAAGGCGAAAACCTCTCGCTGTTTTGCCCGGACCGGCATACGTCAAAACAACAACTGAGACATATACTGAAGAAGTTTACTCAAATTCAAGGGATGAGTCCCAACATGGCCATACCAAGAAGTATTATGGACTTCACCCTGATGAAGGGAATAATTTGCACCCAGTAGATTTCAATAAACTCATAGCCAAAGTCCCAAGGAGAGCAAGCCAGCCACCAGAACACGAAATGAGCTTAAGTGGACCAATGAATGATATTGAGAAGGCCATTGAGTACATGAAAGAGGCTATATATCTTCACTCTGGCAAAAATGTGTTTCCTGCATCAGATCATCCTAAGAAATATAGCTACACAGAAACTATTGACAGCAAAGAAGCAGCACGACGGTACGGGAATCACGGTCGACCGCCCCCAGTGCAAGGCGCCAGTGTAGCAACCATTAACTGCAAAGAGGCTGCAAGGAAGTATAAAGGTGCAACAGTGTGAAACCAAGTGAAAGAGGATGCACTTTGTCATGGATGTAGTGATAATACTAGGTTTGCATAAGTAGCTATTGTGTTTTATTTCAAAAAAAAAAAAAAAAAAAAAGAAGTAGCTATTGTGTCAAGGGTGGAGGATATACATGTTTTATGCTAGCTGAACTATGCTCATGTTGGCGGGTGTTTTCTTGCTTTTGTTTTATGTAATATGTGGCATGATCAATAAAACTTGATAAG TGACATTTTAGCTGATGATATAATGCATTAATCAGTTGAGCTATGCTTTAGGTTGCTCAGATTGGTAGCTACAGTAAGTTTAATCTTTAATCAATACTTTAACACTTCCATTTAGACACAGTTTGATTAGTTGTTAGCTTCCTGGGTAAAGTAAAACTAGATTCCTTTCAATCCTCGGTCAATTCAAGAACTTAACGTGCAATTACAAGGCTGAAGCCCTGAGCTTTTAACATATGCTGGCTAAAAAGTCTAGACAGATTGGTGGATTGGCTAGTCTGAATTTCCTATATAAACCATTTAGAATAGAGAGAAAAACCCCAAGGTCTCTAAGGCATAAAGAGTAGATCACACTCATTTAGGCTATGGCCGATTTTCGCTCCGGTTTCTTTTGTCGCCCCGACAACAAGAAGATCGGATCACGTCCCGAAGAAAATAGCAAAACAAGCCTTGTCATCCCTGACCATAAATGCAAGCCAACTCGTGTCGATGCAGACGAAAGGCGAAAACCTCTCGCTGTTTTGCCCGGACCGGCATACGTCAAAACAACAACTGAGACATATACTGAAGAAGTTTACTCAAATTCAAGGGATGAGTCCCAACATGGCCATACCAAGAAGTATTATGGACTTCACCCTGATGAAGGGAATAATTTGCACCCAGTAGATTTCAATAAACTCATAGCCAAAGTCCCAAGGAGAGCAAGCCAGCCACCAGAACACGAAATGAGCTTAAGTGGACCAATGAATGATATTGAGAAGGCCATTGAGTACATGAAAGAGGCTATATATCTTCACTCTGGCAAAAATGTGTTTCCTGCATCAGATCATCCTAAGAAATATAGCTACACAGAAACTATTGACAGCAAAGAAGCAGCACGACGGTACGGGAATCACGGTCGACCGCCCCCAGTGCAAGGCGCCAGTGTAGCAACCATTAACTGCAAAGAGGCTGCAAGGAAGTATAAAGGTGCAACAGTGTGAAACCAAGTGAAAGAGGATGCACTTTGTCATGGATGTAGTGATAATACTAGGTTTGCATAAGTAGCTATTGTGTTTTATTTCAAAAAAAAAAAAAAAAAAAAAGAAGTAGCTATTGTGTCAAGGGTGGAGGATATACATGTTTTATGCTAGCTGAACTATGCTCATGTTGGCGGGTGTTTTCTTGCTTTTGTTTTATGTAATATGTGGCATGATCAATAAAACTTGATAAG ATGGCCGATTTTCGCTCCGGTTTCTTTTGTCGCCCCGACAACAAGAAGATCGGATCACGTCCCGAAGAAAATAGCAAAACAAGCCTTGTCATCCCTGACCATAAATGCAAGCCAACTCGTGTCGATGCAGACGAAAGGCGAAAACCTCTCGCTGTTTTGCCCGGACCGGCATACGTCAAAACAACAACTGAGACATATACTGAAGAAGTTTACTCAAATTCAAGGGATGAGTCCCAACATGGCCATACCAAGAAGTATTATGGACTTCACCCTGATGAAGGGAATAATTTGCACCCAGTAGATTTCAATAAACTCATAGCCAAAGTCCCAAGGAGAGCAAGCCAGCCACCAGAACACGAAATGAGCTTAAGTGGACCAATGAATGATATTGAGAAGGCCATTGAGTACATGAAAGAGGCTATATATCTTCACTCTGGCAAAAATGTGTTTCCTGCATCAGATCATCCTAAGAAATATAGCTACACAGAAACTATTGACAGCAAAGAAGCAGCACGACGGTACGGGAATCACGGTCGACCGCCCCCAGTGCAAGGCGCCAGTGTAGCAACCATTAACTGCAAAGAGGCTGCAAGGAAGTATAAAGGTGCAACAGTGTGA MADFRSGFFCRPDNKKIGSRPEENSKTSLVIPDHKCKPTRVDADERRKPLAVLPGPAYVKTTTETYTEEVYSNSRDESQHGHTKKYYGLHPDEGNNLHPVDFNKLIAKVPRRASQPPEHEMSLSGPMNDIEKAIEYMKEAIYLHSGKNVFPASDHPKKYSYTETIDSKEAARRYGNHGRPPPVQGASVATINCKEAARKYKGATV Homology
BLAST of Lcy08g015870 vs. ExPASy TrEMBL
Match: A0A0A0LG87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G012700 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 4.3e-38 Identity = 107/212 (50.47%), Postives = 127/212 (59.91%), Query Frame = 0
BLAST of Lcy08g015870 vs. ExPASy TrEMBL
Match: A0A5A7VCJ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001150 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 1.2e-35 Identity = 105/212 (49.53%), Postives = 126/212 (59.43%), Query Frame = 0
BLAST of Lcy08g015870 vs. ExPASy TrEMBL
Match: E5GBR2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 3.4e-35 Identity = 104/212 (49.06%), Postives = 125/212 (58.96%), Query Frame = 0
BLAST of Lcy08g015870 vs. ExPASy TrEMBL
Match: A0A7J0EZY5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_08g0004010 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.9e-09 Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 0
BLAST of Lcy08g015870 vs. ExPASy TrEMBL
Match: A0A2R6RBH1 (Nodulation-signaling pathway protein isoform 2 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc09444 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.9e-09 Identity = 48/114 (42.11%), Postives = 62/114 (54.39%), Query Frame = 0
BLAST of Lcy08g015870 vs. NCBI nr
Match: KAG6599284.1 (putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 217.2 bits (552), Expect = 1.3e-52 Identity = 126/216 (58.33%), Postives = 143/216 (66.20%), Query Frame = 0
BLAST of Lcy08g015870 vs. NCBI nr
Match: KGN60838.1 (hypothetical protein Csa_019431 [Cucumis sativus]) HSP 1 Score: 167.9 bits (424), Expect = 8.9e-38 Identity = 107/212 (50.47%), Postives = 127/212 (59.91%), Query Frame = 0
BLAST of Lcy08g015870 vs. NCBI nr
Match: KAA0063635.1 (hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa] >TYK18391.1 hypothetical protein E5676_scaffold456G001150 [Cucumis melo var. makuwa]) HSP 1 Score: 159.8 bits (403), Expect = 2.4e-35 Identity = 105/212 (49.53%), Postives = 126/212 (59.43%), Query Frame = 0
BLAST of Lcy08g015870 vs. NCBI nr
Match: ADN33904.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 158.3 bits (399), Expect = 7.1e-35 Identity = 104/212 (49.06%), Postives = 125/212 (58.96%), Query Frame = 0
BLAST of Lcy08g015870 vs. NCBI nr
Match: GFY92005.1 (hypothetical protein Acr_08g0004010 [Actinidia rufa]) HSP 1 Score: 72.8 bits (177), Expect = 3.9e-09 Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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