Lcy08g015650 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g015650
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	Chr08: 46099000 .. 46099556 (-)
RNA-Seq Expression	Lcy08g015650
Synteny	Lcy08g015650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTATCTACAAAAGAAGGTATTAGCATTGTTTCTGATTTTTTGTTGGAAAAGGAAGTGATCGATCATTTTGCGGATATCTATGATTACAATCAGGATTCTGAATGGATTATTGACAATCTTAACTGGGAACCAATTAATTCTGTTTCTGCTAGTGGTCTGATATCTCCTTTTAGGGATGATGAGGTTTTCGAATGCATCAAGTCCATTGGCAAAAATAAAGCTCCGGGTCGAAATGGTTTCACCATTGAATTTTTTAAGAAATTCTGGAATATTTTCAAACCTTCTATTATGTCAGTCTTCCATGATTTCTACCAAAGTAAGGTTATCAATCGAAATATGAATCACACCAATATTGAGCTCAACCCCAAAAGGAATATGACTGGGAAAATCTCAGACTTCCGTCCTATTAGCCTTACCACCTCTCTTTACAAAATTATTGCTAAGGTTTTGGCGGAGCGCTTAAAGTCCACCTTGGAAGACACTATAAGCTTGAATCAGTCGGCTTTTGTTCAAAAGAGACAAATCTCTTTCTTATGCCATTCTGTTAGCTAA

mRNA sequence

ATGAGTTATCTACAAAAGAAGGATTCTGAATGGATTATTGACAATCTTAACTGGGAACCAATTAATTCTGTTTCTGCTAGTGGTCTGATATCTCCTTTTAGGGATGATGAGGTTTTCGAATGCATCAAGTCCATTGGCAAAAATAAAGCTCCGGGTCGAAATGGTTTCACCATTGAATTTTTTAAGAAATTCTGGAATATTTTCAAACCTTCTATTATGTCAGTCTTCCATGATTTCTACCAAAGTAAGGTTATCAATCGAAATATGAATCACACCAATATTGAGCTCAACCCCAAAAGGAATATGACTGGGAAAATCTCAGACTTCCGTCCTATTAGCCTTACCACCTCTCTTTACAAAATTATTGCTAAGGTTTTGGCGGAGCGCTTAAAGTCCACCTTGGAAGACACTATAAGCTTGAATCAGTCGGCTTTTGTTCAAAAGAGACAAATCTCTTTCTTATGCCATTCTGTTAGCTAA

Coding sequence (CDS)

ATGAGTTATCTACAAAAGAAGGATTCTGAATGGATTATTGACAATCTTAACTGGGAACCAATTAATTCTGTTTCTGCTAGTGGTCTGATATCTCCTTTTAGGGATGATGAGGTTTTCGAATGCATCAAGTCCATTGGCAAAAATAAAGCTCCGGGTCGAAATGGTTTCACCATTGAATTTTTTAAGAAATTCTGGAATATTTTCAAACCTTCTATTATGTCAGTCTTCCATGATTTCTACCAAAGTAAGGTTATCAATCGAAATATGAATCACACCAATATTGAGCTCAACCCCAAAAGGAATATGACTGGGAAAATCTCAGACTTCCGTCCTATTAGCCTTACCACCTCTCTTTACAAAATTATTGCTAAGGTTTTGGCGGAGCGCTTAAAGTCCACCTTGGAAGACACTATAAGCTTGAATCAGTCGGCTTTTGTTCAAAAGAGACAAATCTCTTTCTTATGCCATTCTGTTAGCTAA

Protein sequence

MSYLQKKDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWNIFKPSIMSVFHDFYQSKVINRNMNHTNIELNPKRNMTGKISDFRPISLTTSLYKIIAKVLAERLKSTLEDTISLNQSAFVQKRQISFLCHSVS

Homology

[Close]

BLAST of Lcy08g015650 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.8e-12
Identity = 42/123 (34.15%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 29  LISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWNIFKPSIMSVFHDFYQSKVINRN 88
           L +P   DE+ + ++ +  NK+PG +G TIEFF+ FW+   P    V  + ++   +  +
Sbjct: 445 LETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLS 504

Query: 89  MNHTNIELNPKRNMTGKISDFRPISLTTSLYKIIAKVLAERLKSTLEDTISLNQSAFVQK 148
                + L PK+     I ++RP+SL ++ YKI+AK ++ RLKS L + I  +QS  V  
Sbjct: 505 CRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPG 564

Query: 149 RQI 152
           R I
Sbjct: 565 RTI 567

[Close]

BLAST of Lcy08g015650 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 39/145 (26.90%), Postives = 69/145 (47.59%), Query Frame = 0


Query: 7   KDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWN 66
           ++ +  +D      +N      L  P    E+   I S+   K+PG +GFT EF++++  
Sbjct: 427 EEMDTFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKE 486

Query: 67  IFKPSIMSVFHDFYQSKVINRNMNHTNIELNPKRNM-TGKISDFRPISLTTSLYKIIAKV 126
              P ++ +F    +  ++  +    +I L PK    T K  +FRPISL     KI+ K+
Sbjct: 487 ELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKI 546

Query: 127 LAERLKSTLEDTISLNQSAFVQKRQ 151
           LA R++  ++  I  +Q  F+   Q
Sbjct: 547 LANRIQQHIKKLIHHDQVGFIPGMQ 571

[Close]

BLAST of Lcy08g015650 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 41/139 (29.50%), Postives = 64/139 (46.04%), Query Frame = 0


Query: 13  IDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWNIFKPSI 72
           +D      +N      L SP    E+   I S+   K+PG +GF+ EF++ F     P +
Sbjct: 440 LDRYQVPKLNQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPIL 499

Query: 73  MSVFHDFYQSKVINRNMNHTNIELNPK-RNMTGKISDFRPISLTTSLYKIIAKVLAERLK 132
             +FH       +  +     I L PK +    KI +FRPISL     KI+ K+LA R++
Sbjct: 500 HKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQ 559

Query: 133 STLEDTISLNQSAFVQKRQ 151
             ++  I  +Q  F+   Q
Sbjct: 560 EHIKAIIHPDQVGFIPGMQ 578

[Close]

BLAST of Lcy08g015650 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 39/150 (26.00%), Postives = 74/150 (49.33%), Query Frame = 0


Query: 3   YLQKKDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFK 62
           Y   K+ +  ++  +   ++      L  P    E+   I+++ K K+PG +GFT EF++
Sbjct: 422 YENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQ 481

Query: 63  KFWNIFKPSIMSVFHDFYQSKVINRNMNHTNIELNPK--RNMTGKISDFRPISLTTSLYK 122
            F     P ++++F +  +  ++       NI L PK  ++ T K  ++RPISL     K
Sbjct: 482 TFKEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGKDPTRK-ENYRPISLMNIDAK 541

Query: 123 IIAKVLAERLKSTLEDTISLNQSAFVQKRQ 151
           I+ K+L  R++  ++  I  +Q  F+   Q
Sbjct: 542 ILNKILTNRIQQHIKKIIHHDQVGFIPGSQ 570

[Close]

BLAST of Lcy08g015650 vs. ExPASy TrEMBL
Match: A0A5D3DM72 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002870 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 6.5e-34
Identity = 71/145 (48.97%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 7   KDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWN 66
           ++S W+IDNLNW PI++  A  L S F ++E+ E + +   NK+PG +GFT+EF+K  W+
Sbjct: 252 EESPWLIDNLNWSPISTNQAQNLCSMFTEEEIHEALTAFSNNKSPGPDGFTMEFYKSTWS 311

Query: 67  IFKPSIMSVFHDFYQSKVINRNMNHTNIELNPKRNMTGKISDFRPISLTTSLYKIIAKVL 126
           + K  I+++F DF+ + +IN+ +N TNI L  K+    + +D+RPISLTTS+YK+IAKV+
Sbjct: 312 VLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVI 371

Query: 127 AERLKSTLEDTISLNQSAFVQKRQI 152
           AERLK TL  T++ NQ AFV+ RQI
Sbjct: 372 AERLKDTLPYTVAENQMAFVKGRQI 396

[Close]

BLAST of Lcy08g015650 vs. ExPASy TrEMBL
Match: A0A1S4E2K5 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo OX=3656 GN=LOC107991687 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 6.5e-34
Identity = 71/145 (48.97%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 7   KDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWN 66
           ++S W+IDNLNW PI++  A  L S F ++E+ E + +   NK+PG +GFT+EF+K  W+
Sbjct: 252 EESPWLIDNLNWSPISTNQAQNLCSMFTEEEIHEALTAFSNNKSPGPDGFTMEFYKSTWS 311

Query: 67  IFKPSIMSVFHDFYQSKVINRNMNHTNIELNPKRNMTGKISDFRPISLTTSLYKIIAKVL 126
           + K  I+++F DF+ + +IN+ +N TNI L  K+    + +D+RPISLTTS+YK+IAKV+
Sbjct: 312 VLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVI 371

Query: 127 AERLKSTLEDTISLNQSAFVQKRQI 152
           AERLK TL  T++ NQ AFV+ RQI
Sbjct: 372 AERLKDTLPYTVAENQMAFVKGRQI 396

[Close]

BLAST of Lcy08g015650 vs. ExPASy TrEMBL
Match: A0A5D3DDH2 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00040 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.2e-33
Identity = 69/145 (47.59%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 7   KDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWN 66
           ++S W+IDNL+W PI++  A  L S F ++E+   + +   NK+PG +GFT+EF+K  W+
Sbjct: 76  EESPWLIDNLSWSPISTTQAQNLCSLFTEEEIHAALTAFSNNKSPGPDGFTMEFYKSTWS 135

Query: 67  IFKPSIMSVFHDFYQSKVINRNMNHTNIELNPKRNMTGKISDFRPISLTTSLYKIIAKVL 126
           + K  I ++F DF+ + +IN+ +N TNI L  K+    + +D+RPISLTTS+YK+IAKV+
Sbjct: 136 VLKEEIFNIFRDFHSNCIINKAVNMTNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVI 195

Query: 127 AERLKSTLEDTISLNQSAFVQKRQI 152
           AERLK TL  T++ NQ AFV+ RQI
Sbjct: 196 AERLKETLPSTVAENQMAFVKGRQI 220

[Close]

BLAST of Lcy08g015650 vs. ExPASy TrEMBL
Match: A0A5A7TAQ1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00050 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 69/145 (47.59%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 7   KDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWN 66
           ++S W+IDNL+W PI++  A  L S F ++E+   + +   NK+PG +GFT+EF+K  W+
Sbjct: 342 EESPWLIDNLSWSPISTTQAQNLCSLFTEEEIHAALTAFSNNKSPGPDGFTMEFYKSTWS 401

Query: 67  IFKPSIMSVFHDFYQSKVINRNMNHTNIELNPKRNMTGKISDFRPISLTTSLYKIIAKVL 126
             K  I+++F DF+ + +IN+ +N TNI L  K+    + +D+RPISLTTS+YK+IAKV+
Sbjct: 402 DLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAESADYRPISLTTSIYKLIAKVI 461

Query: 127 AERLKSTLEDTISLNQSAFVQKRQI 152
           AERLK TL  T++ NQ AFV+ RQI
Sbjct: 462 AERLKETLPSTVAENQMAFVKGRQI 486

[Close]

BLAST of Lcy08g015650 vs. ExPASy TrEMBL
Match: A0A5A7TI93 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00120 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.6e-32
Identity = 69/145 (47.59%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 7   KDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWN 66
           ++S W+IDNL+W PI++  A  L S F ++E+   + +   NK+PG +GFT+EF+K  W+
Sbjct: 76  EESPWLIDNLSWSPISTTQAQNLCSCFTEEEIHAALTAFSNNKSPGPDGFTMEFYKSTWS 135

Query: 67  IFKPSIMSVFHDFYQSKVINRNMNHTNIELNPKRNMTGKISDFRPISLTTSLYKIIAKVL 126
             K  I+++F DF+ + +IN+ +N TNI L  K+    + +D+RPISLTTS+YK+IAKV+
Sbjct: 136 DLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVI 195

Query: 127 AERLKSTLEDTISLNQSAFVQKRQI 152
           AERLK TL  T++ NQ AFV+ RQI
Sbjct: 196 AERLKETLPSTVAENQMAFVKGRQI 220

[Close]

BLAST of Lcy08g015650 vs. NCBI nr
Match: XP_016902461.1 (PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo])

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-33
Identity = 71/145 (48.97%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 7   KDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWN 66
           ++S W+IDNLNW PI++  A  L S F ++E+ E + +   NK+PG +GFT+EF+K  W+
Sbjct: 252 EESPWLIDNLNWSPISTNQAQNLCSMFTEEEIHEALTAFSNNKSPGPDGFTMEFYKSTWS 311

Query: 67  IFKPSIMSVFHDFYQSKVINRNMNHTNIELNPKRNMTGKISDFRPISLTTSLYKIIAKVL 126
           + K  I+++F DF+ + +IN+ +N TNI L  K+    + +D+RPISLTTS+YK+IAKV+
Sbjct: 312 VLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVI 371

Query: 127 AERLKSTLEDTISLNQSAFVQKRQI 152
           AERLK TL  T++ NQ AFV+ RQI
Sbjct: 372 AERLKDTLPYTVAENQMAFVKGRQI 396

[Close]

BLAST of Lcy08g015650 vs. NCBI nr
Match: KAA0039770.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24727.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-33
Identity = 71/145 (48.97%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 7   KDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWN 66
           ++S W+IDNLNW PI++  A  L S F ++E+ E + +   NK+PG +GFT+EF+K  W+
Sbjct: 252 EESPWLIDNLNWSPISTNQAQNLCSMFTEEEIHEALTAFSNNKSPGPDGFTMEFYKSTWS 311

Query: 67  IFKPSIMSVFHDFYQSKVINRNMNHTNIELNPKRNMTGKISDFRPISLTTSLYKIIAKVL 126
           + K  I+++F DF+ + +IN+ +N TNI L  K+    + +D+RPISLTTS+YK+IAKV+
Sbjct: 312 VLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVI 371

Query: 127 AERLKSTLEDTISLNQSAFVQKRQI 152
           AERLK TL  T++ NQ AFV+ RQI
Sbjct: 372 AERLKDTLPYTVAENQMAFVKGRQI 396

[Close]

BLAST of Lcy08g015650 vs. NCBI nr
Match: TYK21642.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 8.8e-33
Identity = 69/145 (47.59%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 7   KDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWN 66
           ++S W+IDNL+W PI++  A  L S F ++E+   + +   NK+PG +GFT+EF+K  W+
Sbjct: 76  EESPWLIDNLSWSPISTTQAQNLCSLFTEEEIHAALTAFSNNKSPGPDGFTMEFYKSTWS 135

Query: 67  IFKPSIMSVFHDFYQSKVINRNMNHTNIELNPKRNMTGKISDFRPISLTTSLYKIIAKVL 126
           + K  I ++F DF+ + +IN+ +N TNI L  K+    + +D+RPISLTTS+YK+IAKV+
Sbjct: 136 VLKEEIFNIFRDFHSNCIINKAVNMTNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVI 195

Query: 127 AERLKSTLEDTISLNQSAFVQKRQI 152
           AERLK TL  T++ NQ AFV+ RQI
Sbjct: 196 AERLKETLPSTVAENQMAFVKGRQI 220

[Close]

BLAST of Lcy08g015650 vs. NCBI nr
Match: KAA0040038.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.4 bits (376), Expect = 2.5e-32
Identity = 69/145 (47.59%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 7   KDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWN 66
           ++S W+IDNL+W PI++  A  L S F ++E+   + +   NK+PG +GFT+EF+K  W+
Sbjct: 342 EESPWLIDNLSWSPISTTQAQNLCSLFTEEEIHAALTAFSNNKSPGPDGFTMEFYKSTWS 401

Query: 67  IFKPSIMSVFHDFYQSKVINRNMNHTNIELNPKRNMTGKISDFRPISLTTSLYKIIAKVL 126
             K  I+++F DF+ + +IN+ +N TNI L  K+    + +D+RPISLTTS+YK+IAKV+
Sbjct: 402 DLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAESADYRPISLTTSIYKLIAKVI 461

Query: 127 AERLKSTLEDTISLNQSAFVQKRQI 152
           AERLK TL  T++ NQ AFV+ RQI
Sbjct: 462 AERLKETLPSTVAENQMAFVKGRQI 486

[Close]

BLAST of Lcy08g015650 vs. NCBI nr
Match: KAA0041367.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 3.3e-32
Identity = 69/145 (47.59%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 7   KDSEWIIDNLNWEPINSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWN 66
           ++S W+IDNL+W PI++  A  L S F ++E+   + +   NK+PG +GFT+EF+K  W+
Sbjct: 76  EESPWLIDNLSWSPISTTQAQNLCSCFTEEEIHAALTAFSNNKSPGPDGFTMEFYKSTWS 135

Query: 67  IFKPSIMSVFHDFYQSKVINRNMNHTNIELNPKRNMTGKISDFRPISLTTSLYKIIAKVL 126
             K  I+++F DF+ + +IN+ +N TNI L  K+    + +D+RPISLTTS+YK+IAKV+
Sbjct: 136 DLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVI 195

Query: 127 AERLKSTLEDTISLNQSAFVQKRQI 152
           AERLK TL  T++ NQ AFV+ RQI
Sbjct: 196 AERLKETLPSTVAENQMAFVKGRQI 220

[Close]

BLAST of Lcy08g015650 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 5.9e-11
Identity = 36/101 (35.64%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 22  NSVSASGLISPFRDDEVFECIKSIGKNKAPGRNGFTIEFFKKFWNIFKPSIMSVFHDFYQ 81
           N   AS L +   D E+   + ++ +NKAPG + FT EFF + W + K S ++   +F++
Sbjct: 520 NDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFR 579

Query: 82  SKVINRNMNHTNIELNPKRNMTGKISDFRPISLTTSLYKII 123
           +  + +  N T I L PK     ++S FRP+S  T +YKII
Sbjct: 580 TGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKII 620

The following BLAST results are available for this feature:

BLAST of Lcy08g015650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	1.8e-12	34.15	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
O00370	1.1e-09	26.90	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]
P11369	1.2e-08	29.50	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
P08548	1.6e-08	26.00	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]

BLAST of Lcy08g015650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DM72	6.5e-34	48.97	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S4E2K5	6.5e-34	48.97	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo OX=3656 GN=LOC1079...	[more]
A0A5D3DDH2	4.2e-33	47.59	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TAQ1	1.2e-32	47.59	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TI93	1.6e-32	47.59	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Lcy08g015650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902461.1	1.4e-33	48.97	PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo]	[more]
KAA0039770.1	1.4e-33	48.97	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK247...	[more]
TYK21642.1	8.8e-33	47.59	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0040038.1	2.5e-32	47.59	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0041367.1	3.3e-32	47.59	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]

BLAST of Lcy08g015650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43760.1	5.9e-11	35.64	DNAse I-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 98..152 e-value: 9.9E-8 score: 31.8
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 18..151
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 18..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g015650.1	Lcy08g015650.1	mRNA