Lcy08g014770 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g014770
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	60S ribosomal protein L18
Location	Chr08: 44872390 .. 44874902 (-)
RNA-Seq Expression	Lcy08g014770
Synteny	Lcy08g014770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAGGGGTCTTCAAAAACCCTAGAGCCATTTTCGTTCCCTCTCAGCAGTCGCCGTTGCAGAAGGGAAGGGTTTCTCCGCCGTAAGCTCCAATGGTCCGTCTCTTTCTCTCTTTCACTTCTTTACTCTGCTTCCAATAGCGTAGATCAATGTCTGAGATGTGTTTTTCGTTTACTGCAGGGGATCGATCTTGTTGCTGGAGGTAAGAGCAAGAAGACCAAGAGGACTGCGCCCAAGTCCGACGATATCTACCTCAAGCTTCTCGTCAAGGTTGGTTTTTCTAATCATCACTGGTGACGTTGTATTCGTAGCAGGAATGAGCTCTTTCATTCACAGATTGATTTTCGTAGAGAATGGAGATGAGTTCCTATGGTTTTTCTTTTTGATGAAAAAGTATGCAGCGATCTAACTTTAGATATTGTGAATAGAGAGTGGAGTTTTGAATCTAAATCTGTCAGAATCATCTGGAACTTTAGCCATTGTTATTTTCACTTTTGTTTTCCGCTCGTGCTCTGAATTTTTTTTTTAACCTAATTGTGTCGATAAGAAAGTAGGGGGAAGTTTGTGTGCACTGATGATATTTGTGTATCCCAGCTCATTATGAGATCTTTCGTAGGTCCAGGAATGAACTAGTTCGACATTTATCTGAGCCCAGATTTAGAGTTAAACTTTCTAATCGGATTTGAACAATGAAGGAGAATGTATTGTTAAGCATCGGCTATTAATAAACCTTGATTTCAAAGCTTTAGATTTTGAATGTTTTTTGTCCTCATGAGCCGATATTTTTATTCTCTCTTCAATTATTTTTTTGATTGGAGTGCGTTTGTATTTTCAGCCGCAATGATGAAATATGTGATACCCAGCTCATTATGAGACTTTTTAAAGGTCAAGGACTAGACAAATCCACATATTTATCTGAGCTCAAAATTTTCTACCCTGTTTTTGATTTCATCTTGAATTCAAATTTAAAATTAAGATTAAAGTATGGTTACTTTCTTCATGTATTAATAAATGAATGAACCCCTCTGAATATCCTTTTGCTGTTGCAGTCACTGGCTTTGTGTTTTCTACGTATTTTTTCTGAAGGATGTTTGGACTTTTCAATATTGAATTAAGGCTTCCTCCCTGCCTTCGTGGAAGGATAGAGAGATGGGTTGTTGTTCCCTGTGATGCTTCACTTTTTAAACCATGCTAATACTGATCACTGATGATTGATCTTCAACTTATGTCTCTGAGGGAACTAGCCTAGACTCTTGAATTAACTATCTCCAGAAGAGCTATGAGTTTGCATTTATTTCTATTATTATACCTTTGTTATTTCTGTCTTGAGGTGGAATCATCTAAGTTTTATTCTATACGATATTACTATATATTTATATTTAGTATGAGCTAATTTCTTGAATTGGAGATTCTTTTCAACAATAGGAAGTGTATTCTATCTATGCATACTTATTATGTAGGTTTACTAATATATTTATGTGTTTGTTATGCTTAGTTGGATTGCTTAAATGATGGATCTTTATCTTGTTTATTGAATCCAGCTGTACCGGTTTCTTGTCCGAAGAACTGGAAGCAATTTCAATGCAGTGATCCTCAAGCGCTTGTTCATGAGCAAGGTGAACAAGCCACCAATTTCACTATCCAGACTTATCAAATTCATGAAGGGAAAGGTGTGTGCTTCCATTTATGCATTTATGTTCTTGACATTTCGATTTCAGCCTTGCAAAAGATTGTTATTTTTCATTGTCTAAATTCTCTTGTGGTTAACCATGGTATAGGAAGATAAAATTTCTGTCATTGTTGGAACTGTGACCGATGACATTCGTGTTTACGAAGTCCCAGCTTTGAAAGTTACAGCCTTGAGGTTTACTGAGACCGCAAGGGCAAGGATTGAGAAGGCAGGTGGTGAGTGCTTGACCTTCGACCAGCTTGCCCTGAGAGCTCCTCTTGGCCAGAATACGGTATGGCTTGCTTTCTCTCTCACATGCATCTCGAACATACAACCTCTTTAACACAAAAGTGACTCTTACGTTTAGTTTTGGCTTTTGAATTTCATACATGACCATTTTATCTATCTACGAATTCTATATATATTTCATCAGTTCCTGTTTATCTTAGATGCCACCTTGATATCAGTCTGTAAGACCGTTGAAAATTTTTTAGATTCCAACTAATCTTATGTTCGTTTTGCTTCCAAGGTTCTTCTTCGAGGACCGAAGAATGCCCGTGAAGCTGTGAAGCACTTCGGTCCTGCTCCTGGTGTGCCTCACAGCCACACGAAACCGTATGTGAGGTCGAAGGGAAGGAAGTTTGAGAGAGCAAGAGGAAAGAGAAACAGCAGGGGTTTCAGAGTTTAATTTCAGTTTATGTTCAACCTTTTTTGTGAGATTTATTCACGTTTTTGTGGACTTCCAGAAATATTATTATTTGAGACTCAGTCGTCATTGTCTTAGTATGAGTTTTTTTTATTATAAAATCAAAATCGGATTCAGTGAAAGATCTTGTTTAAAGAC

mRNA sequence

TAAAAGGGGTCTTCAAAAACCCTAGAGCCATTTTCGTTCCCTCTCAGCAGTCGCCGTTGCAGAAGGGAAGGGTTTCTCCGCCGTAAGCTCCAATGGGGATCGATCTTGTTGCTGGAGGTAAGAGCAAGAAGACCAAGAGGACTGCGCCCAAGTCCGACGATATCTACCTCAAGCTTCTCGTCAAGCTGTACCGGTTTCTTGTCCGAAGAACTGGAAGCAATTTCAATGCAGTGATCCTCAAGCGCTTGTTCATGAGCAAGGTGAACAAGCCACCAATTTCACTATCCAGACTTATCAAATTCATGAAGGGAAAGGAAGATAAAATTTCTGTCATTGTTGGAACTGTGACCGATGACATTCGTGTTTACGAAGTCCCAGCTTTGAAAGTTACAGCCTTGAGGTTTACTGAGACCGCAAGGGCAAGGATTGAGAAGGCAGGTGGTGAGTGCTTGACCTTCGACCAGCTTGCCCTGAGAGCTCCTCTTGGCCAGAATACGGTTCTTCTTCGAGGACCGAAGAATGCCCGTGAAGCTGTGAAGCACTTCGGTCCTGCTCCTGGTGTGCCTCACAGCCACACGAAACCGTATGTGAGGTCGAAGGGAAGGAAGTTTGAGAGAGCAAGAGGAAAGAGAAACAGCAGGGGTTTCAGAGTTTAATTTCAGTTTATGTTCAACCTTTTTTGTGAGATTTATTCACGTTTTTGTGGACTTCCAGAAATATTATTATTTGAGACTCAGTCGTCATTGTCTTAGTATGAGTTTTTTTTATTATAAAATCAAAATCGGATTCAGTGAAAGATCTTGTTTAAAGAC

Coding sequence (CDS)

ATGGGGATCGATCTTGTTGCTGGAGGTAAGAGCAAGAAGACCAAGAGGACTGCGCCCAAGTCCGACGATATCTACCTCAAGCTTCTCGTCAAGCTGTACCGGTTTCTTGTCCGAAGAACTGGAAGCAATTTCAATGCAGTGATCCTCAAGCGCTTGTTCATGAGCAAGGTGAACAAGCCACCAATTTCACTATCCAGACTTATCAAATTCATGAAGGGAAAGGAAGATAAAATTTCTGTCATTGTTGGAACTGTGACCGATGACATTCGTGTTTACGAAGTCCCAGCTTTGAAAGTTACAGCCTTGAGGTTTACTGAGACCGCAAGGGCAAGGATTGAGAAGGCAGGTGGTGAGTGCTTGACCTTCGACCAGCTTGCCCTGAGAGCTCCTCTTGGCCAGAATACGGTTCTTCTTCGAGGACCGAAGAATGCCCGTGAAGCTGTGAAGCACTTCGGTCCTGCTCCTGGTGTGCCTCACAGCCACACGAAACCGTATGTGAGGTCGAAGGGAAGGAAGTTTGAGAGAGCAAGAGGAAAGAGAAACAGCAGGGGTTTCAGAGTTTAA

Protein sequence

MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

Homology

[Close]

BLAST of Lcy08g014770 vs. ExPASy Swiss-Prot
Match: Q940B0 (60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 9.5e-90
Identity = 163/187 (87.17%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKLLVKLYRFLVRR+ SNFNAVILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRL++FM GK+DKI+V+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHS+TKPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 181 NSRGFRV 188
            SRGF+V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Lcy08g014770 vs. ExPASy Swiss-Prot
Match: P42791 (60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2)

HSP 1 Score: 329.7 bits (844), Expect = 2.1e-89
Identity = 162/187 (86.63%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKL VKLYRFLVRRT S FN VILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRL++FM GKEDKI+V+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 181 NSRGFRV 188
            SRGF+V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Lcy08g014770 vs. ExPASy Swiss-Prot
Match: O65729 (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.6e-84
Identity = 159/184 (86.41%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 4   DLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPIS 63
           DL AGGK+KKTKRT+PKS+DIYLKLLVKLYRFLVRRT SNFNAVILKRLFMSKVN+PP+S
Sbjct: 1   DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60

Query: 64  LSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFD 123
           LSRLIK+M+GKE KI V+VG VTDDIRVY+VP +KVTAL+FTETARARI+KAGGECLTFD
Sbjct: 61  LSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFD 120

Query: 124 QLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSR 183
           QLALR PL  +TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE+ARG+R SR
Sbjct: 121 QLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 180

Query: 184 GFRV 188
           GFRV
Sbjct: 181 GFRV 183

[Close]

BLAST of Lcy08g014770 vs. ExPASy Swiss-Prot
Match: O22254 (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A PE=3 SV=3)

HSP 1 Score: 293.1 bits (749), Expect = 2.2e-78
Identity = 149/188 (79.26%), Postives = 166/188 (88.30%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKRT PKSDD+YLKLLVK  R+LVRRT S FNAVILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKA 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRL+++M GK+ KI+VIVGTVTDD+R+ +VPAL VTALRFTE+ARARI KAGGECL
Sbjct: 61  PLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECL 120

Query: 121 TFDQLALRAPL-GQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGK 180
           TFDQLAL  P   +NTVLLRGPKN REAVKHFGPAPGVPHSHTKPYVR  G+K E ARG+
Sbjct: 121 TFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGR 180

Query: 181 RNSRGFRV 188
           R SRGF+V
Sbjct: 181 RRSRGFKV 188

[Close]

BLAST of Lcy08g014770 vs. ExPASy Swiss-Prot
Match: Q4GXG7 (60S ribosomal protein L18 OS=Timarcha balearica OX=79517 GN=RpL18 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-64
Identity = 126/188 (67.02%), Postives = 154/188 (81.91%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGID +     +K +RT PKS D+YL+LLVKLYR+L RRTG+ FN +ILKRLFMSK+ +P
Sbjct: 1   MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRYLARRTGAKFNKIILKRLFMSKIYRP 60

Query: 61  PISLSRLIKFMK--GKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 120
           PISLS++++FMK  G+E   +VIVGTVTDD R++E+P L + ALR T+TARA I KAGGE
Sbjct: 61  PISLSKVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSICALRVTQTARAGILKAGGE 120

Query: 121 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 180
            +TFDQLALR+P G  TVLL+G +NAREAVKHFGPAPGVPHSH KP VRSKGRKFERARG
Sbjct: 121 VITFDQLALRSPTGSKTVLLQGKRNAREAVKHFGPAPGVPHSHAKPLVRSKGRKFERARG 180

Query: 181 KRNSRGFR 187
           +R S G++
Sbjct: 181 RRRSCGYK 187

[Close]

BLAST of Lcy08g014770 vs. ExPASy TrEMBL
Match: A0A6J1HQ85 (60S ribosomal protein L18-3 OS=Cucurbita maxima OX=3661 GN=LOC111465687 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.4e-96
Identity = 184/187 (98.40%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRLIKFMKGKEDKI+VIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Lcy08g014770 vs. ExPASy TrEMBL
Match: A0A6J1KGZ8 (60S ribosomal protein L18-2 OS=Cucurbita maxima OX=3661 GN=LOC111493781 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95
Identity = 183/187 (97.86%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFN+VILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNSVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRLIKFMKGKEDKI+VIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Lcy08g014770 vs. ExPASy TrEMBL
Match: A0A6J1G525 (60S ribosomal protein L18-3 OS=Cucurbita moschata OX=3662 GN=LOC111450785 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.7e-95
Identity = 183/187 (97.86%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRLIKF KGKEDKI+VIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKFTKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Lcy08g014770 vs. ExPASy TrEMBL
Match: A0A6J1DTG6 (60S ribosomal protein L18-3 OS=Momordica charantia OX=3673 GN=LOC111023330 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.6e-95
Identity = 182/187 (97.33%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRLIKFMKGKE+KI+VIVGTVTDDIRVYEVPALKVTAL+FTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKFMKGKENKIAVIVGTVTDDIRVYEVPALKVTALKFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLAL+APLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALKAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRGFRV
Sbjct: 181 NSRGFRV 187

[Close]

BLAST of Lcy08g014770 vs. ExPASy TrEMBL
Match: A0A6J1FC57 (60S ribosomal protein L18-3-like OS=Cucurbita moschata OX=3662 GN=LOC111444066 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 7.8e-95
Identity = 182/187 (97.33%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKK KRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKAKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRLIKFMKGKE+KI+VIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKFMKGKENKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Lcy08g014770 vs. NCBI nr
Match: XP_022965965.1 (60S ribosomal protein L18-3 [Cucurbita maxima] >KAG6599207.1 60S ribosomal protein L18-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 184/187 (98.40%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRLIKFMKGKEDKI+VIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Lcy08g014770 vs. NCBI nr
Match: KAG6586240.1 (60S ribosomal protein L18-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 359.8 bits (922), Expect = 1.5e-95
Identity = 183/187 (97.86%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRLIKFMKGKEDKI+V+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Lcy08g014770 vs. NCBI nr
Match: XP_022999399.1 (60S ribosomal protein L18-2 [Cucurbita maxima])

HSP 1 Score: 359.0 bits (920), Expect = 2.5e-95
Identity = 183/187 (97.86%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFN+VILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNSVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRLIKFMKGKEDKI+VIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Lcy08g014770 vs. NCBI nr
Match: KAG7021075.1 (60S ribosomal protein L18-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 183/187 (97.86%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRLIKFMKGKE+KI+VIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKFMKGKENKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Lcy08g014770 vs. NCBI nr
Match: XP_023537655.1 (60S ribosomal protein L18-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 181/187 (96.79%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRL+KFMKGKEDKI+V+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLVKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVR+KGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Lcy08g014770 vs. TAIR 10
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 330.9 bits (847), Expect = 6.8e-91
Identity = 163/187 (87.17%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKLLVKLYRFLVRR+ SNFNAVILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRL++FM GK+DKI+V+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHS+TKPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 181 NSRGFRV 188
            SRGF+V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Lcy08g014770 vs. TAIR 10
Match: AT3G05590.1 (ribosomal protein L18 )

HSP 1 Score: 329.7 bits (844), Expect = 1.5e-90
Identity = 162/187 (86.63%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKL VKLYRFLVRRT S FN VILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 61  PISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRL++FM GKEDKI+V+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 181 NSRGFRV 188
            SRGF+V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Lcy08g014770 vs. TAIR 10
Match: AT2G47570.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 8.6e-54
Identity = 104/135 (77.04%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 54  MSKVNKPPISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIE 113
           MSKVNK P+SLSRL+++M GK+ KI+VIVGTVTDD+R+ +VPAL VTALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 114 KAGGECLTFDQLALRAPL-GQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRK 173
           KAGGECLTFDQLAL  P   +NTVLLRGPKN REAVKHFGPAPGVPHSHTKPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 174 FERARGKRNSRGFRV 188
            E ARG+R SRGF+V
Sbjct: 121 IEIARGRRRSRGFKV 135

[Close]

BLAST of Lcy08g014770 vs. TAIR 10
Match: AT2G47570.2 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 8.6e-54
Identity = 104/135 (77.04%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 54  MSKVNKPPISLSRLIKFMKGKEDKISVIVGTVTDDIRVYEVPALKVTALRFTETARARIE 113
           MSKVNK P+SLSRL+++M GK+ KI+VIVGTVTDD+R+ +VPAL VTALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 114 KAGGECLTFDQLALRAPL-GQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRK 173
           KAGGECLTFDQLAL  P   +NTVLLRGPKN REAVKHFGPAPGVPHSHTKPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 174 FERARGKRNSRGFRV 188
            E ARG+R SRGF+V
Sbjct: 121 IEIARGRRRSRGFKV 135

The following BLAST results are available for this feature:

BLAST of Lcy08g014770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940B0	9.5e-90	87.17	60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1	[more]
P42791	2.1e-89	86.63	60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2	[more]
O65729	1.6e-84	86.41	60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV...	[more]
O22254	2.2e-78	79.26	Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A P...	[more]
Q4GXG7	1.8e-64	67.02	60S ribosomal protein L18 OS=Timarcha balearica OX=79517 GN=RpL18 PE=2 SV=1	[more]

BLAST of Lcy08g014770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQ85	5.4e-96	98.40	60S ribosomal protein L18-3 OS=Cucurbita maxima OX=3661 GN=LOC111465687 PE=3 SV=...	[more]
A0A6J1KGZ8	1.2e-95	97.86	60S ribosomal protein L18-2 OS=Cucurbita maxima OX=3661 GN=LOC111493781 PE=3 SV=...	[more]
A0A6J1G525	2.7e-95	97.86	60S ribosomal protein L18-3 OS=Cucurbita moschata OX=3662 GN=LOC111450785 PE=3 S...	[more]
A0A6J1DTG6	4.6e-95	97.33	60S ribosomal protein L18-3 OS=Momordica charantia OX=3673 GN=LOC111023330 PE=3 ...	[more]
A0A6J1FC57	7.8e-95	97.33	60S ribosomal protein L18-3-like OS=Cucurbita moschata OX=3662 GN=LOC111444066 P...	[more]

BLAST of Lcy08g014770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022965965.1	1.1e-95	98.40	60S ribosomal protein L18-3 [Cucurbita maxima] >KAG6599207.1 60S ribosomal prote...	[more]
KAG6586240.1	1.5e-95	97.86	60S ribosomal protein L18-3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022999399.1	2.5e-95	97.86	60S ribosomal protein L18-2 [Cucurbita maxima]	[more]
KAG7021075.1	4.2e-95	97.86	60S ribosomal protein L18-3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023537655.1	4.2e-95	96.79	60S ribosomal protein L18-2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy08g014770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27850.1	6.8e-91	87.17	Ribosomal protein L18e/L15 superfamily protein	[more]
AT3G05590.1	1.5e-90	86.63	ribosomal protein L18	[more]
AT2G47570.1	8.6e-54	77.04	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.2	8.6e-54	77.04	Ribosomal protein L18e/L15 superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.100.10.10		coord: 1..187 e-value: 1.9E-100 score: 336.0
None	No IPR available	PANTHER	PTHR10934:SF19	60S RIBOSOMAL PROTEIN L18-1-RELATED	coord: 1..186
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF17135	Ribosomal_L18	coord: 2..187 e-value: 7.9E-95 score: 315.6
IPR000039	Ribosomal protein L18e	PANTHER	PTHR10934	60S RIBOSOMAL PROTEIN L18	coord: 1..186
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 20..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g014770.1	Lcy08g014770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome