Lcy08g013080 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGAAAACATCTCAAGAATATACACAGATTTCCTTCTTCCTCTCTGTCTGCTTTTACTTGGTTGAAGAAAACCCCCTTTGTTCAAGATGTGGATGTGTTGGAGGCGATGGCTGTCCGAGATAGCCTTCTGTTGGCGAAAGATGGTGGTTTCTTGCAGCTGGAGGTGGAATCTGACTCGGCCAGTGTGGTATCGCTGCTCCGATCGAACGCTTGTGAAAAATCTGAGGTGGGCAAGATTGTGGACGAAATTCGCCAAATTGCCAAGGAATTCCAGTCGTGCTCCTTTTCATGGTGCTCCAGGTCGAGGAATGTGGTGGCCCATAAAGCCGCAAGAGCGGCGCTGTTGGGTGAGCTGAACGGTGTATGGATTGAAGATGTGTCGGCGCCGCTGCGTCATGCTCTTGAAGCTGAGCGTTTAGACAGGTCGAGGGTTGTTGAGTTGCGTTGTCTGTAGCCCTTTTCTGTCGGTTTGCTTTGTTCAAAAAAAAAAAAACTTTTTATTCATTTTTCTCTCTTTTTTTTTTTTTTATCTCTAACTATTTTTTTTCTCATTGATTGTTTGTTGT GTGAAAACATCTCAAGAATATACACAGATTTCCTTCTTCCTCTCTGTCTGCTTTTACTTGGTTGAAGAAAACCCCCTTTGTTCAAGATGTGGATGTGTTGGAGGCGATGGCTGTCCGAGATAGCCTTCTGTTGGCGAAAGATGGTGGTTTCTTGCAGCTGGAGGTGGAATCTGACTCGGCCAGTGTGGTATCGCTGCTCCGATCGAACGCTTGTGAAAAATCTGAGGTGGGCAAGATTGTGGACGAAATTCGCCAAATTGCCAAGGAATTCCAGTCGTGCTCCTTTTCATGGTGCTCCAGGTCGAGGAATGTGGTGGCCCATAAAGCCGCAAGAGCGGCGCTGTTGGGTGAGCTGAACGGTGTATGGATTGAAGATGTGTCGGCGCCGCTGCGTCATGCTCTTGAAGCTGAGCGTTTAGACAGGTCGAGGGTTGTTGAGTTGCGTTGTCTGTAGCCCTTTTCTGTCGGTTTGCTTTGTTCAAAAAAAAAAAAACTTTTTATTCATTTTTCTCTCTTTTTTTTTTTTTTATCTCTAACTATTTTTTTTCTCATTGATTGTTTGTTGT ATGGCTGTCCGAGATAGCCTTCTGTTGGCGAAAGATGGTGGTTTCTTGCAGCTGGAGGTGGAATCTGACTCGGCCAGTGTGGTATCGCTGCTCCGATCGAACGCTTGTGAAAAATCTGAGGTGGGCAAGATTGTGGACGAAATTCGCCAAATTGCCAAGGAATTCCAGTCGTGCTCCTTTTCATGGTGCTCCAGGTCGAGGAATGTGGTGGCCCATAAAGCCGCAAGAGCGGCGCTGTTGGGTGAGCTGAACGGTGTATGGATTGAAGATGTGTCGGCGCCGCTGCGTCATGCTCTTGAAGCTGAGCGTTTAGACAGGTCGAGGGTTGTTGAGTTGCGTTGTCTGTAG MAVRDSLLLAKDGGFLQLEVESDSASVVSLLRSNACEKSEVGKIVDEIRQIAKEFQSCSFSWCSRSRNVVAHKAARAALLGELNGVWIEDVSAPLRHALEAERLDRSRVVELRCL Homology
BLAST of Lcy08g013080 vs. ExPASy TrEMBL
Match: B9T5J0 (RNase H domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0157780 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.4e-08 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of Lcy08g013080 vs. ExPASy TrEMBL
Match: A0A2K2D3A0 (RNase H domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_3g45155v3 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07 Identity = 32/88 (36.36%), Postives = 56/88 (63.64%), Query Frame = 0
BLAST of Lcy08g013080 vs. ExPASy TrEMBL
Match: A0A2N9EYC3 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7737 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07 Identity = 35/98 (35.71%), Postives = 53/98 (54.08%), Query Frame = 0
BLAST of Lcy08g013080 vs. ExPASy TrEMBL
Match: A0A2N9IYC8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57142 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.9e-07 Identity = 35/98 (35.71%), Postives = 53/98 (54.08%), Query Frame = 0
BLAST of Lcy08g013080 vs. ExPASy TrEMBL
Match: A0A2N9G0G1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24139 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 6.4e-07 Identity = 33/98 (33.67%), Postives = 52/98 (53.06%), Query Frame = 0
BLAST of Lcy08g013080 vs. NCBI nr
Match: XP_023881690.1 (uncharacterized protein LOC111994061 [Quercus suber]) HSP 1 Score: 77.8 bits (190), Expect = 6.8e-11 Identity = 46/113 (40.71%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of Lcy08g013080 vs. NCBI nr
Match: XP_023905314.1 (uncharacterized protein LOC112017083 [Quercus suber]) HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09 Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 0
BLAST of Lcy08g013080 vs. NCBI nr
Match: KAG2565207.1 (hypothetical protein PVAP13_7NG002334 [Panicum virgatum]) HSP 1 Score: 68.6 bits (166), Expect = 4.1e-08 Identity = 35/98 (35.71%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of Lcy08g013080 vs. NCBI nr
Match: EEF28878.1 (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 67.8 bits (164), Expect = 7.1e-08 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of Lcy08g013080 vs. NCBI nr
Match: XP_024317835.1 (uncharacterized protein LOC112271862 [Brachypodium distachyon] >XP_024317836.1 uncharacterized protein LOC112271862 [Brachypodium distachyon] >PNT68773.1 hypothetical protein BRADI_3g45155v3 [Brachypodium distachyon] >PNT68774.1 hypothetical protein BRADI_3g45155v3 [Brachypodium distachyon]) HSP 1 Score: 65.9 bits (159), Expect = 2.7e-07 Identity = 32/88 (36.36%), Postives = 56/88 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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