Lcy08g012680 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g012680
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	transcription factor bHLH146-like
Location	Chr08: 41950226 .. 41951069 (+)
RNA-Seq Expression	Lcy08g012680
Synteny	Lcy08g012680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGATAAGATTTTTCACTTTTCCAACTATATCAACCACCACTCTTTCCTTTGTTTGAAATTCTCTCTCAAGTCTCCCCCATGCTTCATTGCTTTCCTACATAAAAAGAGACTCTCCCTTTCCCTTTCTTCTCCAAAACCCACCAATTTTTCCTCTTCCTTTCCTCTTTTCCAAGTTCCATTTCTTGATCATCCAATTCCCAAGCTCTTTTAAACCTACATTATCATATTCTTCTTCATTTTTTTTTTTTGTGAAAAAAAAAAAAAAACAATGGGAAGGCAAATTTTGAGCAAAAGAAGAAGGGTATTGTCCCTTGACCCAAACAAACTTGCATACTCCATGTTTGCAAGAAACTATGTCAGATATTTGATTACATCCTTAGCCAAAATTTCTTCAAATCCTTCCCATCATCATCAACAAAAAAAATTTCAAGAACTTGTGAAGTTTGAAGTGGACATGGCAATGGCTGAATCAGCTGCAAGTGAATTTGCATGGGGCAATGCTCTAAAAAAGAAGCTTCTTCAAAGAGATCAATTAGTTGGCAATAATGGAAACAATAATGGTGGTTTTGATTTCTCTCTCCAAACAGTGAAATTTTCTCAAGAAAATCTAGAGAGAGAAGAAGAAGAAGATCAAGAAGAAGAGAAAAAGATGGAGAATGGATTGATGAAGCTGAGAAAAATCTTACCAGGTGGTAGTGGAGATGATGATGATTCTAATAATGGAGGAGATTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATATAAAATGTCTTGAGTTGCAGGTGAATGTTCTTAGATGTTTGGTTGATAATACAAACACAAATTGATTTTTTTT

mRNA sequence

GGGATAAGATTTTTCACTTTTCCAACTATATCAACCACCACTCTTTCCTTTGTTTGAAATTCTCTCTCAAGTCTCCCCCATGCTTCATTGCTTTCCTACATAAAAAGAGACTCTCCCTTTCCCTTTCTTCTCCAAAACCCACCAATTTTTCCTCTTCCTTTCCTCTTTTCCAAGTTCCATTTCTTGATCATCCAATTCCCAAGCTCTTTTAAACCTACATTATCATATTCTTCTTCATTTTTTTTTTTTGTGAAAAAAAAAAAAAAACAATGGGAAGGCAAATTTTGAGCAAAAGAAGAAGGGTATTGTCCCTTGACCCAAACAAACTTGCATACTCCATGTTTGCAAGAAACTATGTCAGATATTTGATTACATCCTTAGCCAAAATTTCTTCAAATCCTTCCCATCATCATCAACAAAAAAAATTTCAAGAACTTGTGAAGTTTGAAGTGGACATGGCAATGGCTGAATCAGCTGCAAGTGAATTTGCATGGGGCAATGCTCTAAAAAAGAAGCTTCTTCAAAGAGATCAATTAGTTGGCAATAATGGAAACAATAATGGTGGTTTTGATTTCTCTCTCCAAACAGTGAAATTTTCTCAAGAAAATCTAGAGAGAGAAGAAGAAGAAGATCAAGAAGAAGAGAAAAAGATGGAGAATGGATTGATGAAGCTGAGAAAAATCTTACCAGGTGGTAGTGGAGATGATGATGATTCTAATAATGGAGGAGATTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATATAAAATGTCTTGAGTTGCAGGTGAATGTTCTTAGATGTTTGGTTGATAATACAAACACAAATTGATTTTTTTT

Coding sequence (CDS)

ATGGGAAGGCAAATTTTGAGCAAAAGAAGAAGGGTATTGTCCCTTGACCCAAACAAACTTGCATACTCCATGTTTGCAAGAAACTATGTCAGATATTTGATTACATCCTTAGCCAAAATTTCTTCAAATCCTTCCCATCATCATCAACAAAAAAAATTTCAAGAACTTGTGAAGTTTGAAGTGGACATGGCAATGGCTGAATCAGCTGCAAGTGAATTTGCATGGGGCAATGCTCTAAAAAAGAAGCTTCTTCAAAGAGATCAATTAGTTGGCAATAATGGAAACAATAATGGTGGTTTTGATTTCTCTCTCCAAACAGTGAAATTTTCTCAAGAAAATCTAGAGAGAGAAGAAGAAGAAGATCAAGAAGAAGAGAAAAAGATGGAGAATGGATTGATGAAGCTGAGAAAAATCTTACCAGGTGGTAGTGGAGATGATGATGATTCTAATAATGGAGGAGATTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATATAAAATGTCTTGAGTTGCAGGTGAATGTTCTTAGATGTTTGGTTGATAATACAAACACAAATTGA

Protein sequence

MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQELVKFEVDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLEREEEEDQEEEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIKCLELQVNVLRCLVDNTNTN

Homology

[Close]

BLAST of Lcy08g012680 vs. ExPASy Swiss-Prot
Match: Q9SUM5 (Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-16
Identity = 61/185 (32.97%), Postives = 99/185 (53.51%), Query Frame = 0


Query: 1   MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQELVKFE 60
           M RQI+++++RV SL+PNK   ++F R Y  +L+ +L K++ N      +   ++ VK E
Sbjct: 1   MERQIINRKKRVFSLEPNKNPSAVFTRKYTSHLVPALKKLNMN------KNSSKQTVKHE 60

Query: 61  VDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLEREEEE 120
           VDMA+A S A EFAW   L +KL           +++ G              LER ++E
Sbjct: 61  VDMALALS-AQEFAWSRFLLQKLSSSSNPTTTTSSSSDGIRI-----------LERPDKE 120

Query: 121 DQEEEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIKCLELQVNVLRC 180
              EE  +E  L +L+K+LPGG           ++  +++L +  +YIKCLELQ   L+ 
Sbjct: 121 GGNEEGGIEERLRELKKLLPGGE----------EMNVEEMLSEIGNYIKCLELQTIALKS 157

Query: 181 LVDNT 186
           +V ++
Sbjct: 181 IVQDS 157

[Close]

BLAST of Lcy08g012680 vs. ExPASy TrEMBL
Match: A0A6J1FJ33 (transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.5e-58
Identity = 138/195 (70.77%), Postives = 158/195 (81.03%), Query Frame = 0


Query: 1   MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQ---KKFQELV 60
           MGRQIL KR+RVLSL+PNKLAY+MFARNYV+YL+TSL KI    SHHHQQ   + FQ+LV
Sbjct: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKI----SHHHQQHQEQNFQKLV 60

Query: 61  KFEVDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLERE 120
           KFEVDMAMA+S A+EF+WGNALKKKLLQR+     +GN + GF  SLQ VKFS+ENLERE
Sbjct: 61  KFEVDMAMAQS-ATEFSWGNALKKKLLQRE-----DGNGSNGFGLSLQRVKFSRENLERE 120

Query: 121 EEEDQE----EEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIKCLEL 180
           +EE +E    EE+K+ENGLMKLRKI+PGGS         G+LEEDDL KQTESYIKCLEL
Sbjct: 121 DEEHEEREEHEERKIENGLMKLRKIVPGGS--------NGELEEDDLFKQTESYIKCLEL 176

Query: 181 QVNVLRCLVDNTNTN 189
           QVNVLRCLVD TNTN
Sbjct: 181 QVNVLRCLVD-TNTN 176

[Close]

BLAST of Lcy08g012680 vs. ExPASy TrEMBL
Match: A0A6J1I0E6 (transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.5e-56
Identity = 138/197 (70.05%), Postives = 159/197 (80.71%), Query Frame = 0


Query: 1   MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHH--HQQKKFQELVK 60
           MGRQIL KR+RVLSL+P+KLAY+MFARNYV+YL+TSL KIS    HH  HQQ+ FQ+LVK
Sbjct: 1   MGRQILRKRKRVLSLEPDKLAYTMFARNYVKYLMTSLPKIS---HHHQQHQQQNFQKLVK 60

Query: 61  FEVDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLEREE 120
           FEVDMAMA+S A+EF+WGNALKKKLLQR+    +NG+N  GF FSL  VKFS+ENLERE+
Sbjct: 61  FEVDMAMAQS-ATEFSWGNALKKKLLQRED---DNGSN--GFGFSL-PVKFSRENLERED 120

Query: 121 EEDQE-------EEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIKCL 180
           EE +E       EE+K+ENGLMKLRKI+PGGS         G+LEEDDL KQTESYIKCL
Sbjct: 121 EEHEEHEEHEEREERKIENGLMKLRKIVPGGS--------NGELEEDDLFKQTESYIKCL 178

Query: 181 ELQVNVLRCLVDNTNTN 189
           ELQVNVLRCLVD TNTN
Sbjct: 181 ELQVNVLRCLVD-TNTN 178

[Close]

BLAST of Lcy08g012680 vs. ExPASy TrEMBL
Match: A0A6J1DIU0 (transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.3e-52
Identity = 127/188 (67.55%), Postives = 151/188 (80.32%), Query Frame = 0


Query: 1   MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQELVKFE 60
           MGRQI+ KRRRV SL+PNKL Y MFARNY + L+ SL+KIS  P+H + QK    +VKFE
Sbjct: 1   MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKIS--PNHQNLQK----VVKFE 60

Query: 61  VDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLEREEEE 120
           VDMAMA S ASEFAWG+ALK+KLLQ+ +    NGN    FDFSLQT+KFS+E    +EEE
Sbjct: 61  VDMAMALS-ASEFAWGHALKQKLLQKQE--NGNGNGRNSFDFSLQTLKFSRE----KEEE 120

Query: 121 DQEEEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIKCLELQVNVLRC 180
           ++E++KKMENGL+KLRKILPGG  ++D  +NG  LEEDDLLKQTESYIKCLELQVNVLRC
Sbjct: 121 EEEDKKKMENGLVKLRKILPGGENNND--SNGDLLEEDDLLKQTESYIKCLELQVNVLRC 172

Query: 181 LVDNTNTN 189
           LVD TNT+
Sbjct: 181 LVD-TNTD 172

[Close]

BLAST of Lcy08g012680 vs. ExPASy TrEMBL
Match: A0A0A0LJA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 2.0e-50
Identity = 129/194 (66.49%), Postives = 156/194 (80.41%), Query Frame = 0


Query: 1   MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQELVKFE 60
           M R+++ K RRV S++P+K+AY+MF RNYV++L+TSL KI    SH  QQ+ F++LVKFE
Sbjct: 1   MVRKMVRKGRRVFSIEPSKVAYTMFERNYVKHLMTSLVKI----SHQQQQQNFRKLVKFE 60

Query: 61  VDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTV-KFSQENLEREE- 120
           VDMAMA+S ASEF+WG ALKKKLLQRDQ V  NGN N GFDFS+QTV K SQENL  EE 
Sbjct: 61  VDMAMAQS-ASEFSWGIALKKKLLQRDQQVLGNGNEN-GFDFSVQTVKKTSQENLGNEEE 120

Query: 121 ----EEDQEEEKKMENGLMKLRKILPGGSGDDDDSNNGGDL-EEDDLLKQTESYIKCLEL 180
               EE++EEE++MENGLMKLRKI+PGG    D+ + GG+L EEDDLLKQTESY+KCLEL
Sbjct: 121 DHHHEEEEEEEEEMENGLMKLRKIIPGG----DNFSIGGNLDEEDDLLKQTESYVKCLEL 180

Query: 181 QVNVLRCLVDNTNT 188
           QVNVLR LV+ TNT
Sbjct: 181 QVNVLRGLVE-TNT 183

[Close]

BLAST of Lcy08g012680 vs. ExPASy TrEMBL
Match: A0A1S4DZN3 (uncharacterized protein At4g30180 OS=Cucumis melo OX=3656 GN=LOC103492789 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.2e-49
Identity = 131/199 (65.83%), Postives = 156/199 (78.39%), Query Frame = 0


Query: 1   MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQELVKFE 60
           M R+I+ K RRV S++PNK+AY+MFARNYV++L+TSL KI    SH  QQ+ FQ+LV+FE
Sbjct: 1   MVRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKI----SHQQQQQNFQKLVRFE 60

Query: 61  VDMAMAESAASEFAWGNALKKKLLQRD--QLVGNNGNNNGGFDFSLQTV-KFSQENL--- 120
           VDMAMA+S ASEF+WG ALKKKLLQRD  Q V  NG+ N GFDFSLQT+ K S +NL   
Sbjct: 61  VDMAMAQS-ASEFSWGIALKKKLLQRDDQQEVLGNGSEN-GFDFSLQTMKKISHKNLGNE 120

Query: 121 -----EREEEEDQEEEKKMENGLMKLRKILPGGSGDDDDSNNGGDL-EEDDLLKQTESYI 180
                E EEEE++EEE++MENGLMKLRKI+PGG   DD S  G +L EEDDLLKQTESY+
Sbjct: 121 EEDHHEDEEEEEEEEEEEMENGLMKLRKIIPGG---DDFSIGGNNLDEEDDLLKQTESYV 180

Query: 181 KCLELQVNVLRCLVDNTNT 188
           KCLELQVNVLR LV+ TNT
Sbjct: 181 KCLELQVNVLRGLVE-TNT 189

[Close]

BLAST of Lcy08g012680 vs. NCBI nr
Match: XP_023538247.1 (transcription factor bHLH146-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.6 bits (610), Expect = 2.2e-59
Identity = 140/192 (72.92%), Postives = 158/192 (82.29%), Query Frame = 0


Query: 1   MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQ---KKFQELV 60
           MGRQIL KR+RVLSL+PNKLAY+MFARNYV+YL+TSL KI    SHHHQQ   + FQ+LV
Sbjct: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKI----SHHHQQHQEQNFQKLV 60

Query: 61  KFEVDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLERE 120
           KFEVDMAMA+S A+EF+WGNALKKKLLQR+     +GN + GF FSLQTVKFSQENLERE
Sbjct: 61  KFEVDMAMAQS-ATEFSWGNALKKKLLQRE-----DGNGSNGFGFSLQTVKFSQENLERE 120

Query: 121 EEEDQE-EEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIKCLELQVN 180
            EE +E +E K+ENGLMKLRKI+PGGS         G+LEEDDL KQTESYIKCLELQVN
Sbjct: 121 HEEHEERKEPKIENGLMKLRKIVPGGS--------NGELEEDDLFKQTESYIKCLELQVN 173

Query: 181 VLRCLVDNTNTN 189
           VLRCLVD TNTN
Sbjct: 181 VLRCLVD-TNTN 173

[Close]

BLAST of Lcy08g012680 vs. NCBI nr
Match: XP_022938205.1 (transcription factor bHLH146-like [Cucurbita moschata])

HSP 1 Score: 235.7 bits (600), Expect = 3.2e-58
Identity = 138/195 (70.77%), Postives = 158/195 (81.03%), Query Frame = 0


Query: 1   MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQ---KKFQELV 60
           MGRQIL KR+RVLSL+PNKLAY+MFARNYV+YL+TSL KI    SHHHQQ   + FQ+LV
Sbjct: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKI----SHHHQQHQEQNFQKLV 60

Query: 61  KFEVDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLERE 120
           KFEVDMAMA+S A+EF+WGNALKKKLLQR+     +GN + GF  SLQ VKFS+ENLERE
Sbjct: 61  KFEVDMAMAQS-ATEFSWGNALKKKLLQRE-----DGNGSNGFGLSLQRVKFSRENLERE 120

Query: 121 EEEDQE----EEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIKCLEL 180
           +EE +E    EE+K+ENGLMKLRKI+PGGS         G+LEEDDL KQTESYIKCLEL
Sbjct: 121 DEEHEEREEHEERKIENGLMKLRKIVPGGS--------NGELEEDDLFKQTESYIKCLEL 176

Query: 181 QVNVLRCLVDNTNTN 189
           QVNVLRCLVD TNTN
Sbjct: 181 QVNVLRCLVD-TNTN 176

[Close]

BLAST of Lcy08g012680 vs. NCBI nr
Match: KAG6586090.1 (Transcription factor basic helix-loop-helix 146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 234.6 bits (597), Expect = 7.1e-58
Identity = 137/195 (70.26%), Postives = 158/195 (81.03%), Query Frame = 0


Query: 1   MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQ---KKFQELV 60
           MGRQIL KR+RVLSL+PNKLAY+MFARNYV+YL+TSL KI    SHHHQQ   + FQ+LV
Sbjct: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKI----SHHHQQHQEQSFQKLV 60

Query: 61  KFEVDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLERE 120
           KFEVDMAMA+S A+EF+WGNALKKKLLQR+     +GN + GF  SLQ VKF++ENLERE
Sbjct: 61  KFEVDMAMAQS-ATEFSWGNALKKKLLQRE-----DGNGSNGFGLSLQRVKFARENLERE 120

Query: 121 EEEDQE----EEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIKCLEL 180
           +EE +E    EE+K+ENGLMKLRKI+PGGS         G+LEEDDL KQTESYIKCLEL
Sbjct: 121 DEEHEEREEHEERKIENGLMKLRKIVPGGS--------NGELEEDDLFKQTESYIKCLEL 176

Query: 181 QVNVLRCLVDNTNTN 189
           QVNVLRCLVD TNTN
Sbjct: 181 QVNVLRCLVD-TNTN 176

[Close]

BLAST of Lcy08g012680 vs. NCBI nr
Match: XP_022969610.1 (transcription factor bHLH146-like [Cucurbita maxima])

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-55
Identity = 138/197 (70.05%), Postives = 159/197 (80.71%), Query Frame = 0


Query: 1   MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHH--HQQKKFQELVK 60
           MGRQIL KR+RVLSL+P+KLAY+MFARNYV+YL+TSL KIS    HH  HQQ+ FQ+LVK
Sbjct: 1   MGRQILRKRKRVLSLEPDKLAYTMFARNYVKYLMTSLPKIS---HHHQQHQQQNFQKLVK 60

Query: 61  FEVDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLEREE 120
           FEVDMAMA+S A+EF+WGNALKKKLLQR+    +NG+N  GF FSL  VKFS+ENLERE+
Sbjct: 61  FEVDMAMAQS-ATEFSWGNALKKKLLQRED---DNGSN--GFGFSL-PVKFSRENLERED 120

Query: 121 EEDQE-------EEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIKCL 180
           EE +E       EE+K+ENGLMKLRKI+PGGS         G+LEEDDL KQTESYIKCL
Sbjct: 121 EEHEEHEEHEEREERKIENGLMKLRKIVPGGS--------NGELEEDDLFKQTESYIKCL 178

Query: 181 ELQVNVLRCLVDNTNTN 189
           ELQVNVLRCLVD TNTN
Sbjct: 181 ELQVNVLRCLVD-TNTN 178

[Close]

BLAST of Lcy08g012680 vs. NCBI nr
Match: XP_038877916.1 (transcription factor bHLH146-like [Benincasa hispida])

HSP 1 Score: 224.9 bits (572), Expect = 5.6e-55
Identity = 132/190 (69.47%), Postives = 156/190 (82.11%), Query Frame = 0


Query: 1   MGRQILSK-RRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKK--FQELV 60
           MGRQI+ K  RRV SL+PNK+AY+MFARNYV++L+TSL KIS +   HHQQ++  FQ+ V
Sbjct: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKHLMTSLVKISHHHHQHHQQQEQNFQKFV 60

Query: 61  KFEVDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLERE 120
           KFEVDMAMA+SA+ +FAWG ALKKKLLQRDQ+    GN N  FDFSLQTVKFSQENL +E
Sbjct: 61  KFEVDMAMAQSASDQFAWGIALKKKLLQRDQV----GNEN-DFDFSLQTVKFSQENLGKE 120

Query: 121 EEEDQEEEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIKCLELQVNV 180
           EEE+ EEEKKME+GLMKLRKI+PGG+    D N    +E+DDLLKQTESY+KCLELQVNV
Sbjct: 121 EEEEAEEEKKMEHGLMKLRKIIPGGA----DFN----IEDDDLLKQTESYVKCLELQVNV 176

Query: 181 LRCLVDNTNT 188
           LR LV+ TNT
Sbjct: 181 LRGLVE-TNT 176

[Close]

BLAST of Lcy08g012680 vs. TAIR 10
Match: AT2G18969.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT4G30180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 7.4e-21
Identity = 73/198 (36.87%), Postives = 111/198 (56.06%), Query Frame = 0


Query: 1   MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKK-FQELVKF 60
           M RQI++KR+RV SL PNK   ++FAR YV +L+ +L KI+ N S     K+  ++ VK 
Sbjct: 1   MERQIINKRKRVFSLQPNKNPKAVFARRYVSHLVPALKKINMNKSSSKTNKQSLEQTVKH 60

Query: 61  EVDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLER--- 120
           EVDMA A S A EFAW   L++KLL            +  +D  + T     E LER   
Sbjct: 61  EVDMAFALS-AQEFAWSRFLQQKLL------------SSPYDDPISTSSSPSEILERSSK 120

Query: 121 -------EEEEDQEEEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIK 180
                  ++ +++EE  +++  L +L+K+LPGG           ++  +++L +  SYI 
Sbjct: 121 RQGGEKHQDSDEEEEGGEIKKRLKELQKLLPGGE----------EMNMEEILSEIGSYIV 175

Query: 181 CLELQVNVLRCLV-DNTN 187
           CLELQ+ VL+ +V DNT+
Sbjct: 181 CLELQMIVLKSIVQDNTS 175

[Close]

BLAST of Lcy08g012680 vs. TAIR 10
Match: AT4G30180.1 (sequence-specific DNA binding transcription factors;transcription regulators )

HSP 1 Score: 88.2 bits (217), Expect = 7.7e-18
Identity = 61/185 (32.97%), Postives = 99/185 (53.51%), Query Frame = 0


Query: 1   MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQELVKFE 60
           M RQI+++++RV SL+PNK   ++F R Y  +L+ +L K++ N      +   ++ VK E
Sbjct: 1   MERQIINRKKRVFSLEPNKNPSAVFTRKYTSHLVPALKKLNMN------KNSSKQTVKHE 60

Query: 61  VDMAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLEREEEE 120
           VDMA+A S A EFAW   L +KL           +++ G              LER ++E
Sbjct: 61  VDMALALS-AQEFAWSRFLLQKLSSSSNPTTTTSSSSDGIRI-----------LERPDKE 120

Query: 121 DQEEEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIKCLELQVNVLRC 180
              EE  +E  L +L+K+LPGG           ++  +++L +  +YIKCLELQ   L+ 
Sbjct: 121 GGNEEGGIEERLRELKKLLPGGE----------EMNVEEMLSEIGNYIKCLELQTIALKS 157

Query: 181 LVDNT 186
           +V ++
Sbjct: 181 IVQDS 157

[Close]

BLAST of Lcy08g012680 vs. TAIR 10
Match: AT2G43060.1 (ILI1 binding bHLH 1 )

HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04
Identity = 40/157 (25.48%), Postives = 70/157 (44.59%), Query Frame = 0


Query: 32  YLITSLAKI-SSNPSHHHQQKKFQ-ELVKFEVDMAMAESA-ASEFAWGNALKKKLLQRDQ 91
           + + SL+ +   NP     QK ++   +K    ++MA +A  S   W  AL ++  + D 
Sbjct: 21  HFLQSLSNLRKQNPFDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLRRADKDDN 80

Query: 92  LVGNNGNNNGGFDFSLQTVKFSQE--NLEREEEEDQEEEKKMENGLMKLRKILPGGSGDD 151
            +                V+FS+    +  +     +    +E    +LR ++PGG G  
Sbjct: 81  KI----------------VRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGG-- 140

Query: 152 DDSNNGGDLEEDDLLKQTESYIKCLELQVNVLRCLVD 184
                   +E   L+++T  YIKCL +QV V++CLVD
Sbjct: 141 --------METSKLMEETAHYIKCLSMQVKVMQCLVD 151

The following BLAST results are available for this feature:

BLAST of Lcy08g012680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUM5	1.1e-16	32.97	Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=...	[more]

BLAST of Lcy08g012680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJ33	1.5e-58	70.77	transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 ...	[more]
A0A6J1I0E6	5.5e-56	70.05	transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE...	[more]
A0A6J1DIU0	6.3e-52	67.55	transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4...	[more]
A0A0A0LJA7	2.0e-50	66.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1	[more]
A0A1S4DZN3	2.2e-49	65.83	uncharacterized protein At4g30180 OS=Cucumis melo OX=3656 GN=LOC103492789 PE=4 S...	[more]

BLAST of Lcy08g012680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538247.1	2.2e-59	72.92	transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938205.1	3.2e-58	70.77	transcription factor bHLH146-like [Cucurbita moschata]	[more]
KAG6586090.1	7.1e-58	70.26	Transcription factor basic helix-loop-helix 146, partial [Cucurbita argyrosperma...	[more]
XP_022969610.1	1.1e-55	70.05	transcription factor bHLH146-like [Cucurbita maxima]	[more]
XP_038877916.1	5.6e-55	69.47	transcription factor bHLH146-like [Benincasa hispida]	[more]

BLAST of Lcy08g012680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18969.1	7.4e-21	36.87	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT4G30180.1	7.7e-18	32.97	sequence-specific DNA binding transcription factors;transcription regulators	[more]
AT2G43060.1	1.3e-04	25.48	ILI1 binding bHLH 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..157
None	No IPR available	PANTHER	PTHR33124:SF42	TRANSCRIPTION FACTOR BHLH146	coord: 103..185 coord: 3..96
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 103..185
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 3..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g012680.1	Lcy08g012680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity