Lcy08g011190 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGTCTATCCATTCATCAATGTCCAAAACTTAGAAAGGAACGTCCAATCAATGTTCTACAACAACTTGAATACTTGAAAATAGAATTACGGGAAATGAAAGAGATTCTTGAGAAGGAAAAGTCAATGCAGACATTGGAACCAAATCAATTCAAGACTTCCAAGGTACGAAATTGATTCTACGACATCACCTTTATTGAATATTTTGGTAGATAAAATTATGTGCTTCAATATGTTTTTATTTTGTTTCTTCAATATGTTTAGAAAATCCTTCCTAAGGTTATGTTGCCCACAAGTCTATTTGAATTGCATCTATAGTGAAGGGTTTTATGGATCGTCTCTTCTCGTATTCATTGTGACTTGTGAACTTGCTATAAAAAAAAGGTTGAAATTCTCTTTGCTAGATATTTGGTTTTGTTTTGTTGTTTTGGTTGGCTTTCTAAAATCCTATACGGTAATGAGAGAAAAGAAAAGTATAAGGAATTAAAAAATGTGAGGAAACGGAGAGATTAGTGATAATAATTAAATTTGAATAAAAACAATAATTCACATAACAATAAAATTTTCTTTCTAATTTTATCTCAAAAAAATTTCGGGGTACTTTTTATCTTTTTCCATAAAGATTTTTGAATGAGTTTGTTGTATTGTGCTATAGCGCAGACCATATATATTCAATGAAATATACTTGCTTGTTTGATGCATGACTTTAAATTGGTATCGTTCAGTTATAAGGACAATAGTTTTAAAAAAAAAAAAACTTAGTCGCTATAAATATAAAATCTTTATAAGAAAATAAAAAAAATGAGGTTTTCAATTTGATTAATTCACATAATATATTTTGAATTTTAATTAACAAAGTTGTTAATGATCAGGTTGAGACTACACAATCGCAAGATGGTTATGAGTTGTTTTCCAAGCTTAAATCTTTGATGCTACATGGTTCTCTTGATTACAACTTAACTCATTTGCCAATGGACATTGTACCAATATTGCACCGTACGTCTTGAGAGTTTTAGAGTAGAAAATGAGTTGATTGAAGAAATATTCCCCAATGAGAGAATGATTAATGTGAAAGAAGACCAATGTGCAAGATTTGACGGTCTAAAGTATTTGTATCTCTCTAAACTGCCAAAGCTTAGTCATTTTTGGAAGGAGAATACCTCACTTGAACATTTGGAACATCTAGAAGTATCAGAATGTGGTACATTGAATATTTTGGTGCCACCATCAGTGTCTTTTAGAAACTTGAGCTGGCTTCAAGTGCATGAATGTCATGGACTAACCCATTTGCTAAATCCTTCGGTGGCTAGAACCCTAGTACAACTTGAATATTTGGAGTTAGAAGAATGCAAAAGGATGACAACTGTAATTGTTGTTGGAGAAGCTGAAGAAGAAAATGATGAAATTGTTTTCAACAAACTACAATGGTTAAGGCTTGTTAATTTTCCCAAACTGACAAGCTTTCATTCTGGAAAATGCATCATTAAATTCCCATGTTTGAACTTTATAACCATTGTGAGATGTCCTGAAATCAAGGTTTTTTCCCTTGGAATTGTAAGCACACCTCATTTGAAACCTGAAAATATTTTATTACATAATGATAATGAATATTTCGACGCAAAAGATCCCAAAGCGATGATTGTGGAAGATATCAATGCCATCATCAACCATCATGGGTTGGTCCTAATGGTCAATAAGGGCATTGAAAAAACAAAGGGCTTAGAGGGAATGAGTTCAATCCATGGTGACCACCTATCAAGGATATTACGAGTTTCCTTGGCAACCAACGACAAAGTTGGGAAGACGGTTTTGATAGCAGCATTCATTTCCAATTATTTTTGGGAATTCTAA ATGGAAGGTCTATCCATTCATCAATGTCCAAAACTTAGAAAGGAACGTCCAATCAATGTTCTACAACAACTTGAATACTTGAAAATAGAATTACGGGAAATGAAAGAGATTCTTGAGAAGGAAAAGTCAATGCAGACATTGGAACCAAATCAATTCAAGACTTCCAAGGTTGAGACTACACAATCGCAAGATGGTTATGAGTTGTTTTCCAAGCTTAAATCTTTGATGCTACATGGTTCTCTTGATTACAACTTAACTCATTTGCCAATGGACATTGTACCAATATTGCACCTGTCTTTTAGAAACTTGAGCTGGCTTCAAGTGCATGAATGTCATGGACTAACCCATTTGCTAAATCCTTCGGTGGCTAGAACCCTAGTACAACTTGAATATTTGGAGTTAGAAGAATGCAAAAGGATGACAACTGTAATTGTTGTTGGAGAAGCTGAAGAAGAAAATGATGAAATTGTTTTCAACAAACTACAATGGTTAAGGCTTGTTAATTTTCCCAAACTGACAAGCTTTCATTCTGGAAAATGCATCATTAAATTCCCATGTTTGAACTTTATAACCATTGTGAGATGTCCTGAAATCAAGGTTTTTTCCCTTGGAATTGTAAGCACACCTCATTTGAAACCTGAAAATATTTTATTACATAATGATAATGAATATTTCGACGCAAAAGATCCCAAAGCGATGATTGTGGAAGATATCAATGCCATCATCAACCATCATGGGTTGGTCCTAATGGTCAATAAGGGCATTGAAAAAACAAAGGGCTTAGAGGGAATGAGTTCAATCCATGGTGACCACCTATCAAGGATATTACGAGTTTCCTTGGCAACCAACGACAAAGTTGGGAAGACGGTTTTGATAGCAGCATTCATTTCCAATTATTTTTGGGAATTCTAA ATGGAAGGTCTATCCATTCATCAATGTCCAAAACTTAGAAAGGAACGTCCAATCAATGTTCTACAACAACTTGAATACTTGAAAATAGAATTACGGGAAATGAAAGAGATTCTTGAGAAGGAAAAGTCAATGCAGACATTGGAACCAAATCAATTCAAGACTTCCAAGGTTGAGACTACACAATCGCAAGATGGTTATGAGTTGTTTTCCAAGCTTAAATCTTTGATGCTACATGGTTCTCTTGATTACAACTTAACTCATTTGCCAATGGACATTGTACCAATATTGCACCTGTCTTTTAGAAACTTGAGCTGGCTTCAAGTGCATGAATGTCATGGACTAACCCATTTGCTAAATCCTTCGGTGGCTAGAACCCTAGTACAACTTGAATATTTGGAGTTAGAAGAATGCAAAAGGATGACAACTGTAATTGTTGTTGGAGAAGCTGAAGAAGAAAATGATGAAATTGTTTTCAACAAACTACAATGGTTAAGGCTTGTTAATTTTCCCAAACTGACAAGCTTTCATTCTGGAAAATGCATCATTAAATTCCCATGTTTGAACTTTATAACCATTGTGAGATGTCCTGAAATCAAGGTTTTTTCCCTTGGAATTGTAAGCACACCTCATTTGAAACCTGAAAATATTTTATTACATAATGATAATGAATATTTCGACGCAAAAGATCCCAAAGCGATGATTGTGGAAGATATCAATGCCATCATCAACCATCATGGGTTGGTCCTAATGGTCAATAAGGGCATTGAAAAAACAAAGGGCTTAGAGGGAATGAGTTCAATCCATGGTGACCACCTATCAAGGATATTACGAGTTTCCTTGGCAACCAACGACAAAGTTGGGAAGACGGTTTTGATAGCAGCATTCATTTCCAATTATTTTTGGGAATTCTAA MEGLSIHQCPKLRKERPINVLQQLEYLKIELREMKEILEKEKSMQTLEPNQFKTSKVETTQSQDGYELFSKLKSLMLHGSLDYNLTHLPMDIVPILHLSFRNLSWLQVHECHGLTHLLNPSVARTLVQLEYLELEECKRMTTVIVVGEAEEENDEIVFNKLQWLRLVNFPKLTSFHSGKCIIKFPCLNFITIVRCPEIKVFSLGIVSTPHLKPENILLHNDNEYFDAKDPKAMIVEDINAIINHHGLVLMVNKGIEKTKGLEGMSSIHGDHLSRILRVSLATNDKVGKTVLIAAFISNYFWEF Homology
BLAST of Lcy08g011190 vs. ExPASy Swiss-Prot
Match: Q940K0 (Disease resistance protein UNI OS=Arabidopsis thaliana OX=3702 GN=UNI PE=1 SV=2) HSP 1 Score: 47.8 bits (112), Expect = 2.6e-04 Identity = 36/120 (30.00%), Postives = 55/120 (45.83%), Query Frame = 0
BLAST of Lcy08g011190 vs. ExPASy TrEMBL
Match: A0A1S3B439 (probable disease resistance protein At4g27220 OS=Cucumis melo OX=3656 GN=LOC103485808 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 4.6e-52 Identity = 143/328 (43.60%), Postives = 177/328 (53.96%), Query Frame = 0
BLAST of Lcy08g011190 vs. ExPASy TrEMBL
Match: A0A5A7UB75 (Putative disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G002020 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 4.6e-52 Identity = 143/328 (43.60%), Postives = 177/328 (53.96%), Query Frame = 0
BLAST of Lcy08g011190 vs. ExPASy TrEMBL
Match: A0A097NYY2 (Vat protein OS=Cucumis melo OX=3656 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 5.8e-47 Identity = 134/331 (40.48%), Postives = 178/331 (53.78%), Query Frame = 0
BLAST of Lcy08g011190 vs. ExPASy TrEMBL
Match: A0A6J1DAA6 (uncharacterized protein LOC111018819 OS=Momordica charantia OX=3673 GN=LOC111018819 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.2e-44 Identity = 132/332 (39.76%), Postives = 168/332 (50.60%), Query Frame = 0
BLAST of Lcy08g011190 vs. ExPASy TrEMBL
Match: A0A1S3C0S8 (probable disease resistance protein At1g61180 OS=Cucumis melo OX=3656 GN=LOC103495509 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 6.0e-44 Identity = 130/328 (39.63%), Postives = 171/328 (52.13%), Query Frame = 0
BLAST of Lcy08g011190 vs. NCBI nr
Match: KAA0051446.1 (putative disease resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 214.9 bits (546), Expect = 9.4e-52 Identity = 143/328 (43.60%), Postives = 177/328 (53.96%), Query Frame = 0
BLAST of Lcy08g011190 vs. NCBI nr
Match: XP_008441731.1 (PREDICTED: probable disease resistance protein At4g27220 [Cucumis melo] >XP_008441732.1 PREDICTED: probable disease resistance protein At4g27220 [Cucumis melo] >XP_008441734.1 PREDICTED: probable disease resistance protein At4g27220 [Cucumis melo] >XP_016899499.1 PREDICTED: probable disease resistance protein At4g27220 [Cucumis melo]) HSP 1 Score: 214.9 bits (546), Expect = 9.4e-52 Identity = 143/328 (43.60%), Postives = 177/328 (53.96%), Query Frame = 0
BLAST of Lcy08g011190 vs. NCBI nr
Match: XP_038890456.1 (probable disease resistance protein At4g27220 isoform X1 [Benincasa hispida]) HSP 1 Score: 209.9 bits (533), Expect = 3.0e-50 Identity = 139/327 (42.51%), Postives = 173/327 (52.91%), Query Frame = 0
BLAST of Lcy08g011190 vs. NCBI nr
Match: AIU36098.1 (vat protein [Cucumis melo]) HSP 1 Score: 198.0 bits (502), Expect = 1.2e-46 Identity = 134/331 (40.48%), Postives = 178/331 (53.78%), Query Frame = 0
BLAST of Lcy08g011190 vs. NCBI nr
Match: XP_022150758.1 (uncharacterized protein LOC111018819 [Momordica charantia]) HSP 1 Score: 190.3 bits (482), Expect = 2.5e-44 Identity = 132/332 (39.76%), Postives = 168/332 (50.60%), Query Frame = 0
BLAST of Lcy08g011190 vs. TAIR 10
Match: AT1G61180.2 (LRR and NB-ARC domains-containing disease resistance protein ) HSP 1 Score: 48.9 bits (115), Expect = 8.3e-06 Identity = 41/156 (26.28%), Postives = 70/156 (44.87%), Query Frame = 0
BLAST of Lcy08g011190 vs. TAIR 10
Match: AT1G61180.1 (LRR and NB-ARC domains-containing disease resistance protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.9e-05 Identity = 36/120 (30.00%), Postives = 55/120 (45.83%), Query Frame = 0
BLAST of Lcy08g011190 vs. TAIR 10
Match: AT5G47260.1 (ATP binding;GTP binding;nucleotide binding;nucleoside-triphosphatases ) HSP 1 Score: 43.9 bits (102), Expect = 2.7e-04 Identity = 57/217 (26.27%), Postives = 93/217 (42.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|