Lcy08g010400 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g010400
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ULP_PROTEASE domain-containing protein
Location	Chr08: 31827263 .. 31827552 (-)
RNA-Seq Expression	Lcy08g010400
Synteny	Lcy08g010400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCCCCCGTCAATTGGGTTCTGTAGAGTGTGGATATTATGTGCAAAAGTATATTCGAGAAATAGTACACAACTCCTCTACGTCAATAAGTAATCTTGTACGTAATCGTATTCAACTCCACTACTTCTATAAGTATCTTTTAATTATTTATAATTAAATTTTCTTAAGGATTCTTATATTTTGTTTATGGTTTTTCTTATGTTTAGTTTAACACGAAAACAACATATATACAAGAAGAAATTTACGAGGTTCGAATAGAATGGGCAGGGTTCGTGGGAACATTTGTGTAG

mRNA sequence

TGCCCCCCGTCAATTGGGTTCTGTAGAGTGTGGATATTATGTGCAAAAGTATATTCGAGAAATAGTACACAACTCCTCTACGTCAATAAGTAATCTTTTTAACACGAAAACAACATATATACAAGAAGAAATTTACGAGGTTCGAATAGAATGGGCAGGGTTCGTGGGAACATTTGTGTAG

Coding sequence (CDS)

TGCCCCCCGTCAATTGGGTTCTGTAGAGTGTGGATATTATGTGCAAAAGTATATTCGAGAAATAGTACACAACTCCTCTACGTCAATAAGTAATCTTTTTAACACGAAAACAACATATATACAAGAAGAAATTTACGAGGTTCGAATAGAATGGGCAGGGTTCGTGGGAACATTTGTGTAG

Protein sequence

APRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTTYIQEEIYEVRIEWAGFVGTFV

Homology

[Close]

BLAST of Lcy08g010400 vs. ExPASy TrEMBL
Match: A0A5D3BF14 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold92G00020 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-16
Identity = 45/58 (77.59%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 2   PRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTTYIQEEIYEVRIEWAGFVGTFV 60
           PRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK  Y QEEI E+R EWA FV  FV
Sbjct: 748 PRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYSQEEIDEIRTEWAAFVSRFV 805

[Close]

BLAST of Lcy08g010400 vs. ExPASy TrEMBL
Match: A0A5D3DD98 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00290 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-16
Identity = 45/58 (77.59%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 2    PRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTTYIQEEIYEVRIEWAGFVGTFV 60
            PRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK  Y QEEI E+R EWA FV  FV
Sbjct: 1472 PRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYSQEEIDEIRTEWAAFVSRFV 1529

[Close]

BLAST of Lcy08g010400 vs. ExPASy TrEMBL
Match: A0A5A7SL06 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2405G00020 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-16
Identity = 45/58 (77.59%), Postives = 48/58 (82.76%), Query Frame = 0


Query: 2   PRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTTYIQEEIYEVRIEWAGFVGTFV 60
           PRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK  Y QE+I E+RIEWA FV  FV
Sbjct: 381 PRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEKIDEIRIEWAAFVSRFV 438

[Close]

BLAST of Lcy08g010400 vs. ExPASy TrEMBL
Match: A0A5D3C2U9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00070 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.3e-16
Identity = 45/58 (77.59%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 2    PRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTTYIQEEIYEVRIEWAGFVGTFV 60
            PRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK  Y QEEI E+R EWA FV  FV
Sbjct: 1452 PRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 1509

[Close]

BLAST of Lcy08g010400 vs. ExPASy TrEMBL
Match: A0A5D3CUJ0 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00250 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.3e-16
Identity = 45/58 (77.59%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 2   PRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTTYIQEEIYEVRIEWAGFVGTFV 60
           PRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK  Y QEEI E+R EWA FV  FV
Sbjct: 300 PRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 357

[Close]

BLAST of Lcy08g010400 vs. NCBI nr
Match: TYK21543.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 3.6e-16
Identity = 45/58 (77.59%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 2    PRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTTYIQEEIYEVRIEWAGFVGTFV 60
            PRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK  Y QEEI E+R EWA FV  FV
Sbjct: 1472 PRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYSQEEIDEIRTEWAAFVSRFV 1529

[Close]

BLAST of Lcy08g010400 vs. NCBI nr
Match: TYJ97211.1 (uncharacterized protein E5676_scaffold92G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 3.6e-16
Identity = 45/58 (77.59%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 2   PRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTTYIQEEIYEVRIEWAGFVGTFV 60
           PRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK  Y QEEI E+R EWA FV  FV
Sbjct: 748 PRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYSQEEIDEIRTEWAAFVSRFV 805

[Close]

BLAST of Lcy08g010400 vs. NCBI nr
Match: KAA0025155.1 (uncharacterized protein E6C27_scaffold2405G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 3.6e-16
Identity = 45/58 (77.59%), Postives = 48/58 (82.76%), Query Frame = 0


Query: 2   PRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTTYIQEEIYEVRIEWAGFVGTFV 60
           PRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK  Y QE+I E+RIEWA FV  FV
Sbjct: 381 PRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEKIDEIRIEWAAFVSRFV 438

[Close]

BLAST of Lcy08g010400 vs. NCBI nr
Match: TYK11813.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 94.0 bits (232), Expect = 4.7e-16
Identity = 45/58 (77.59%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 2    PRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTTYIQEEIYEVRIEWAGFVGTFV 60
            PRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK  Y QEEI E+R EWA FV  FV
Sbjct: 1413 PRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 1470

[Close]

BLAST of Lcy08g010400 vs. NCBI nr
Match: TYK27996.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 94.0 bits (232), Expect = 4.7e-16
Identity = 45/58 (77.59%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 2   PRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTTYIQEEIYEVRIEWAGFVGTFV 60
           PRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK  Y QEEI E+R EWA FV  FV
Sbjct: 856 PRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWAAFVSRFV 913

The following BLAST results are available for this feature:

BLAST of Lcy08g010400 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g010400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BF14	1.7e-16	77.59	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3DD98	1.7e-16	77.59	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00290 PE...	[more]
A0A5A7SL06	1.7e-16	77.59	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3C2U9	2.3e-16	77.59	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00070 PE...	[more]
A0A5D3CUJ0	2.3e-16	77.59	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Lcy08g010400 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK21543.1	3.6e-16	77.59	transposase [Cucumis melo var. makuwa]	[more]
TYJ97211.1	3.6e-16	77.59	uncharacterized protein E5676_scaffold92G00020 [Cucumis melo var. makuwa]	[more]
KAA0025155.1	3.6e-16	77.59	uncharacterized protein E6C27_scaffold2405G00020 [Cucumis melo var. makuwa]	[more]
TYK11813.1	4.7e-16	77.59	transposase [Cucumis melo var. makuwa]	[more]
TYK27996.1	4.7e-16	77.59	transposase [Cucumis melo var. makuwa]	[more]

BLAST of Lcy08g010400 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 2..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g010400.1	Lcy08g010400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0006508	proteolysis
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008234	cysteine-type peptidase activity