Lcy08g010090 (gene) Sponge gourd (P93075) v1

Overview
NameLcy08g010090
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionuniversal stress protein PHOS32-like
LocationChr08: 29771176 .. 29772733 (-)
RNA-Seq ExpressionLcy08g010090
SyntenyLcy08g010090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAACTTCCTACAGCCATGTGTGGACTTCGCCACATCTCAAAATCCCAAAGGCACATCGACATTGATACACAACAACCCCATCACCAAGAGCAATAGTTTCAGTAATTTGCCCTAATCCACCTTTCAAGACATGGTTCTTATGCAAAAAAGACATCTCAAAGTTGAGTTTAAGCCAAACCTTCTTGGAACTTGAGATGAAAACTGACACCATAAATTTGATACAGGTGCTAAAGGTGATGAGGTTGTGACGGGCTACTTTGGTGGCTTACTTGAGGAGGAAATCATTGACGTAATAGACCTTATTCTTGTGGAGGTGAAAGCAGTAGTGGTTGATATTTGGTTTGAGCCTTCATGAGAGGGATTCTCAACAATGTTCTTTGCGTTATCTCCACTAAATTTTTGGAGCTTTCTAAACACGATTGCAGTCTCTTCGCCAAAGCCATATTCTCTCAAATTTGGAGCCCAAAAAGTTCAACATTTGGTTCAAAAATCATGGGTAAGAGGTTCAGTTCTGAGATTGATAAATATTGGCAATGAAATTTCCCTTCTTGATCTAGTCTTTTCATGCTATCAAGCTTGTGTGGTTCTTTACAGTATAAATGTCATTTGAGTTTCCTTTCTCTCTTTAATTTGTCTTGGAATCTAAACATGAAAGTTTTGGTCAAGGAAGTGAGAGTGGAAGAACGAGAAGGATTTTGTCCCATTTGTTTAAGTTGGATAACATTATTTGATTAGTTGAACTTTGTTTAAATTATTTCTTCCTTTCTTTGTCTTAACAACATATTTTCCTTTGATTTTCCTGGAAAAATTGGAACTTAATCCGTTTTTCCAACAAAATAATGATAAATGATACAAAGTTTTAAGTTTTGTGCAAGTAATTTGTATATTCTTGTGGAGATAGTATGACACTATTTAAATTTATATTTAACTAAGAACTTGTCAATTGTATATAAGAAATGTACCTTCTTTATTAGGTAATCTTTCCATTCTCTATAATTAGGAAAAGTGTAAATTTATTGATTGCTGTTTTTTGAATTCACATATGTCTTATTTTTCTAGCTTTCTTGTCATATATATATTTTTTTCTTTATAAATTTCTTTTGAGATTTTCTCTATTAAAATATAGTTGGCATGAAAGCTTTCTATCCTCTTGTAAGCATGCAAGAGAAGCTTTGTTTTCTAATTATTTTATCTCATTTTTTGAATTTGTATTATTTAGACCTTGTTTGATGAACATTTCGTTTTTAGTTTCCCTTTTTAAAAATTGTGTTTGTTTCCTTACCATTTCTTGGCTTAGAAAGCAGTTGAATGTGGATTAAGCAACATGAGATAATTACAGAAACATGACACTAAAGGAGAACCCAACTCGGATTTCTTTACAACATAAATAAAGTGGGACACGTTGAAATTTTATTTCAGGTGCAAGTGGAGAGATGAAATTTATACAGGGGAAGGAGATGGGTCATGTGATTGTAGAAGAAGCAAAGAAACAGCGAGTGTCTTTGTTGGTTCTTGTTCAAAGAAAGCAGACCCACCGTTATGGTCACTGGTAA

mRNA sequence

ATGTCCAACTTCCTACAGCCATGTGTGGACTTCGCCACATCTCAAAATCCCAAAGGCACATCGACATTGATACACAACAACCCCATCACCAAGAGCAATAGTTTCAGTGCTAAAGGTGATGAGGTTGTGACGGGCTACTTTGGTGGCTTACTTGAGGAGGAAATCATTGACGTAATAGACCTTATTCTTGTGGAGGTGAAAGCAGTAGTGGTTGATATTTGTCTCTTCGCCAAAGCCATATTCTCTCAAATTTGGAGCCCAAAAAGTTCAACATTTGGTTCAAAAATCATGGGTGCAAGTGGAGAGATGAAATTTATACAGGGGAAGGAGATGGGTCATGTGATTGTAGAAGAAGCAAAGAAACAGCGAGTGTCTTTGTTGGTTCTTGTTCAAAGAAAGCAGACCCACCGTTATGGTCACTGGTAA

Coding sequence (CDS)

ATGTCCAACTTCCTACAGCCATGTGTGGACTTCGCCACATCTCAAAATCCCAAAGGCACATCGACATTGATACACAACAACCCCATCACCAAGAGCAATAGTTTCAGTGCTAAAGGTGATGAGGTTGTGACGGGCTACTTTGGTGGCTTACTTGAGGAGGAAATCATTGACGTAATAGACCTTATTCTTGTGGAGGTGAAAGCAGTAGTGGTTGATATTTGTCTCTTCGCCAAAGCCATATTCTCTCAAATTTGGAGCCCAAAAAGTTCAACATTTGGTTCAAAAATCATGGGTGCAAGTGGAGAGATGAAATTTATACAGGGGAAGGAGATGGGTCATGTGATTGTAGAAGAAGCAAAGAAACAGCGAGTGTCTTTGTTGGTTCTTGTTCAAAGAAAGCAGACCCACCGTTATGGTCACTGGTAA

Protein sequence

MSNFLQPCVDFATSQNPKGTSTLIHNNPITKSNSFSAKGDEVVTGYFGGLLEEEIIDVIDLILVEVKAVVVDICLFAKAIFSQIWSPKSSTFGSKIMGASGEMKFIQGKEMGHVIVEEAKKQRVSLLVLVQRKQTHRYGHW
Homology
[Close]
BLAST of Lcy08g010090 vs. ExPASy TrEMBL
Match: A0A6J1HM19 (uncharacterized protein LOC111465801 OS=Cucurbita maxima OX=3661 GN=LOC111465801 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.3e-05
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 98  GASGEMKFIQGKEMGHVIVEEAKKQRVSLLVLVQRKQT 136
           G   EM+F+QGKEMG VIVEEAKKQRVSLLVL QRKQ+
Sbjct: 135 GVKVEMEFLQGKEMGRVIVEEAKKQRVSLLVLGQRKQS 172

[Close]
BLAST of Lcy08g010090 vs. ExPASy TrEMBL
Match: A0A6J1C057 (universal stress protein PHOS32-like OS=Momordica charantia OX=3673 GN=LOC111007264 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.3e-05
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 98  GASGEMKFIQGKEMGHVIVEEAKKQRVSLLVLVQRKQT 136
           G   EM+F+QGKEMG VIVEEAKKQRVSLLVL QRKQ+
Sbjct: 135 GVQVEMEFLQGKEMGRVIVEEAKKQRVSLLVLGQRKQS 172

[Close]
BLAST of Lcy08g010090 vs. ExPASy TrEMBL
Match: A0A6J1F4R8 (uncharacterized protein LOC111440820 OS=Cucurbita moschata OX=3662 GN=LOC111440820 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.3e-05
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 98  GASGEMKFIQGKEMGHVIVEEAKKQRVSLLVLVQRKQT 136
           G   EM+F+QGKEMG VIVEEAKKQRVSLLVL QRKQ+
Sbjct: 135 GVKVEMEFLQGKEMGRVIVEEAKKQRVSLLVLGQRKQS 172

[Close]
BLAST of Lcy08g010090 vs. ExPASy TrEMBL
Match: A0A1S3BVX2 (uncharacterized protein LOC103494065 OS=Cucumis melo OX=3656 GN=LOC103494065 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.3e-05
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 98  GASGEMKFIQGKEMGHVIVEEAKKQRVSLLVLVQRKQT 136
           G   EM+F+QGKEMG VIVEEAKKQRVSLLVL QRKQ+
Sbjct: 132 GVQVEMEFLQGKEMGRVIVEEAKKQRVSLLVLGQRKQS 169

[Close]
BLAST of Lcy08g010090 vs. NCBI nr
Match: XP_008453308.1 (PREDICTED: uncharacterized protein LOC103494065 [Cucumis melo])

HSP 1 Score: 57.8 bits (138), Expect = 8.9e-05
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 98  GASGEMKFIQGKEMGHVIVEEAKKQRVSLLVLVQRKQT 136
           G   EM+F+QGKEMG VIVEEAKKQRVSLLVL QRKQ+
Sbjct: 132 GVQVEMEFLQGKEMGRVIVEEAKKQRVSLLVLGQRKQS 169

[Close]
BLAST of Lcy08g010090 vs. NCBI nr
Match: XP_004138331.1 (uncharacterized protein LOC101221050 [Cucumis sativus] >KAE8652448.1 hypothetical protein Csa_013982 [Cucumis sativus])

HSP 1 Score: 57.8 bits (138), Expect = 8.9e-05
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 98  GASGEMKFIQGKEMGHVIVEEAKKQRVSLLVLVQRKQT 136
           G   EM+F+QGKEMG VIVEEAKKQRVSLLVL QRKQ+
Sbjct: 132 GVQVEMEFLQGKEMGRVIVEEAKKQRVSLLVLGQRKQS 169

[Close]
BLAST of Lcy08g010090 vs. NCBI nr
Match: XP_023531669.1 (uncharacterized protein LOC111793841 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 57.8 bits (138), Expect = 8.9e-05
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 98  GASGEMKFIQGKEMGHVIVEEAKKQRVSLLVLVQRKQT 136
           G   EM+F+QGKEMG VIVEEAKKQRVSLLVL QRKQ+
Sbjct: 135 GVKVEMEFLQGKEMGRVIVEEAKKQRVSLLVLGQRKQS 172

[Close]
BLAST of Lcy08g010090 vs. NCBI nr
Match: XP_022135256.1 (universal stress protein PHOS32-like [Momordica charantia])

HSP 1 Score: 57.8 bits (138), Expect = 8.9e-05
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 98  GASGEMKFIQGKEMGHVIVEEAKKQRVSLLVLVQRKQT 136
           G   EM+F+QGKEMG VIVEEAKKQRVSLLVL QRKQ+
Sbjct: 135 GVQVEMEFLQGKEMGRVIVEEAKKQRVSLLVLGQRKQS 172

[Close]
BLAST of Lcy08g010090 vs. NCBI nr
Match: XP_022966082.1 (uncharacterized protein LOC111465801 [Cucurbita maxima])

HSP 1 Score: 57.8 bits (138), Expect = 8.9e-05
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 98  GASGEMKFIQGKEMGHVIVEEAKKQRVSLLVLVQRKQT 136
           G   EM+F+QGKEMG VIVEEAKKQRVSLLVL QRKQ+
Sbjct: 135 GVKVEMEFLQGKEMGRVIVEEAKKQRVSLLVLGQRKQS 172

The following BLAST results are available for this feature:
BLAST of Lcy08g010090 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy08g010090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HM194.3e-0578.95uncharacterized protein LOC111465801 OS=Cucurbita maxima OX=3661 GN=LOC111465801... [more]
A0A6J1C0574.3e-0578.95universal stress protein PHOS32-like OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A6J1F4R84.3e-0578.95uncharacterized protein LOC111440820 OS=Cucurbita moschata OX=3662 GN=LOC1114408... [more]
A0A1S3BVX24.3e-0578.95uncharacterized protein LOC103494065 OS=Cucumis melo OX=3656 GN=LOC103494065 PE=... [more]
BLAST of Lcy08g010090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008453308.18.9e-0578.95PREDICTED: uncharacterized protein LOC103494065 [Cucumis melo][more]
XP_004138331.18.9e-0578.95uncharacterized protein LOC101221050 [Cucumis sativus] >KAE8652448.1 hypothetica... [more]
XP_023531669.18.9e-0578.95uncharacterized protein LOC111793841 [Cucurbita pepo subsp. pepo][more]
XP_022135256.18.9e-0578.95universal stress protein PHOS32-like [Momordica charantia][more]
XP_022966082.18.9e-0578.95uncharacterized protein LOC111465801 [Cucurbita maxima][more]
BLAST of Lcy08g010090 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy08g010090.1Lcy08g010090.1mRNA