Lcy08g009970 (gene) Sponge gourd (P93075) v1

Overview
NameLcy08g009970
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr08: 29137508 .. 29138626 (-)
RNA-Seq ExpressionLcy08g009970
SyntenyLcy08g009970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAAAGCCTATGACAGAGTAGAATGGTCGTATCTTGTTGCAATAATGGATAAACTAGGCTTTCCTTCTGATTTGGTGGAATTAATTCGGGGCTGCATTTCTTCTACTTCTTTTTCCATTATTGTTAATGGTGAGGCTCGGGGGTTTTTTGGGGCTACAAGGGGTCTGCGTCAGGGGGATCCTTTATCTCCTTACTTGTTCTTGCTCTGTTCTGAAGGTTTATCTTCTATGTTAGCAAATGCTAGAAATAATAACAAGGCTGGTATTTCGATCGCTTCCACGACTCCCAAGGTATCTCACCTATTCTTTGCGGACGATAGTCTTATTTTTCTCAAAGCACAGGCTGCGGAGTTCGGTCATTTCAGAGCTATCATGGAAGATTATGAGAGGGCTTTGGGTCAATGTATCAATCTGGACAAATCGATGGTATGTTTTTCAAAAAACGTGCTAGAAGAAACAAGAGCATGCCTTGGTTTTATTTTGAAGATGCAGGTGGTGGATAATCAGGGGTCTTATTTGGGGTTGCCATCGTCTTTCCAGAGAGGGAAGAACAAAGATTTTCAAAGCATCATGGATAAGGTGTGGTCCACTTTGCAAGGATGGAAGGAAAGGTTGTTTTCGACAGGGGGCAAGGAGATACTCATTAAAAGTATTGCCCAGGCTATCTCTTCGTATGCTATGGGGTGTTTTAGATTGCCGAAAGGGTTCTTATCCAAAATTACTGCTTTATGTGCTAAGTTTTGGTAGGGCTCATCGGAATTGAAACATCGTATCCATTGGTGCAAGTGGGAGAAATTATGCAAACCCAAGGAAGTTGGGGGGTTGAATTTTCGAGATTTGGAAACCTTTAACAAAGCTTTGCTGGCAAAACAGGGGTGGAGAATTTTTCATAATCCTGATTCTACTGTGGTGAGAATTTTGAAAGGAAAGTACTTTCCTTCATCATCGTTACTGGAGACCACATGCAGTCAGCATTCCTCTTACTTTTGGAAAGGCTTGATTTGTGCTTTAGATCTTTTAAAAGCAGGGATGAGGAGAAACATTGGGAATGGACAGTCTATTAATCTGGTTCTGGATCCTTGGATTCCTATGCCTCAAACCTTTGAGGTCGTCTGA

mRNA sequence

ATGAGTAAAGCCTATGACAGAGTAGAATGGTCGTATCTTGTTGCAATAATGGATAAACTAGGCTTTCCTTCTGATTTGGTGGAATTAATTCGGGGCTGCATTTCTTCTACTTCTTTTTCCATTATTGTTAATGGTGAGGCTCGGGGGTTTTTTGGGGCTACAAGGGGTCTGCGTCAGGGGGATCCTTTATCTCCTTACTTGTTCTTGCTCTGTTCTGAAGGTTTATCTTCTATGTTAGCAAATGCTAGAAATAATAACAAGGCTGGTATTTCGATCGCTTCCACGACTCCCAAGGTATCTCACCTATTCTTTGCGGACGATAGTCTTATTTTTCTCAAAGCACAGGCTGCGGAGTTCGGTCATTTCAGAGCTATCATGGAAGATTATGAGAGGGCTTTGGGTCAATGTATCAATCTGGACAAATCGATGGGCTCATCGGAATTGAAACATCGTATCCATTGGTGCAAGTGGGAGAAATTATGCAAACCCAAGGAAGTTGGGGGGTTGAATTTTCGAGATTTGGAAACCTTTAACAAAGCTTTGCTGGCAAAACAGGGGTGGAGAATTTTTCATAATCCTGATTCTACTGTGGTGAGAATTTTGAAAGGAAAGTACTTTCCTTCATCATCGTTACTGGAGACCACATGCAGTCAGCATTCCTCTTACTTTTGGAAAGGCTTGATTTGTGCTTTAGATCTTTTAAAAGCAGGGATGAGGAGAAACATTGGGAATGGACAGTCTATTAATCTGGTTCTGGATCCTTGGATTCCTATGCCTCAAACCTTTGAGGTCGTCTGA

Coding sequence (CDS)

ATGAGTAAAGCCTATGACAGAGTAGAATGGTCGTATCTTGTTGCAATAATGGATAAACTAGGCTTTCCTTCTGATTTGGTGGAATTAATTCGGGGCTGCATTTCTTCTACTTCTTTTTCCATTATTGTTAATGGTGAGGCTCGGGGGTTTTTTGGGGCTACAAGGGGTCTGCGTCAGGGGGATCCTTTATCTCCTTACTTGTTCTTGCTCTGTTCTGAAGGTTTATCTTCTATGTTAGCAAATGCTAGAAATAATAACAAGGCTGGTATTTCGATCGCTTCCACGACTCCCAAGGTATCTCACCTATTCTTTGCGGACGATAGTCTTATTTTTCTCAAAGCACAGGCTGCGGAGTTCGGTCATTTCAGAGCTATCATGGAAGATTATGAGAGGGCTTTGGGTCAATGTATCAATCTGGACAAATCGATGGGCTCATCGGAATTGAAACATCGTATCCATTGGTGCAAGTGGGAGAAATTATGCAAACCCAAGGAAGTTGGGGGGTTGAATTTTCGAGATTTGGAAACCTTTAACAAAGCTTTGCTGGCAAAACAGGGGTGGAGAATTTTTCATAATCCTGATTCTACTGTGGTGAGAATTTTGAAAGGAAAGTACTTTCCTTCATCATCGTTACTGGAGACCACATGCAGTCAGCATTCCTCTTACTTTTGGAAAGGCTTGATTTGTGCTTTAGATCTTTTAAAAGCAGGGATGAGGAGAAACATTGGGAATGGACAGTCTATTAATCTGGTTCTGGATCCTTGGATTCCTATGCCTCAAACCTTTGAGGTCGTCTGA

Protein sequence

MSKAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQGDPLSPYLFLLCSEGLSSMLANARNNNKAGISIASTTPKVSHLFFADDSLIFLKAQAAEFGHFRAIMEDYERALGQCINLDKSMGSSELKHRIHWCKWEKLCKPKEVGGLNFRDLETFNKALLAKQGWRIFHNPDSTVVRILKGKYFPSSSLLETTCSQHSSYFWKGLICALDLLKAGMRRNIGNGQSINLVLDPWIPMPQTFEVV
Homology
BLAST of Lcy08g009970 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24
Identity = 56/120 (46.67%), Postives = 75/120 (62.50%), Query Frame = 0

Query: 145 SSELKHRIHWCKWEKLCKPKE-VGGLNFRDLETFNKALLAKQGWRIFHNPDSTVVRILKG 204
           S E K +I W  W+KLCK KE  GGL FRDL  FN+ALLAKQ +RI H P + + R+L+ 
Sbjct: 32  SCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRS 91

Query: 205 KYFPSSSLLETTCSQHSSYFWKGLICALDLLKAGMRRNIGNGQSINLVLDPWI----PMP 260
           +YFP SS++E +     SY W+ +I   +LL  G+ R IG+G    + LD WI    P+P
Sbjct: 92  RYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWIMDETPLP 151

BLAST of Lcy08g009970 vs. ExPASy Swiss-Prot
Match: P92555 (Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.3e-12
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 42  IVNGEARGFFGATRGLRQGDPLSPYLFLLCSEGLSSMLANARNNNK-AGISIASTTPKVS 101
           I+NG  +G    +RGLRQGDPLSPYLF+LC+E LS +   A+   +  GI +++ +P+++
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 102 HLFFADDS 109
           HL FADD+
Sbjct: 73  HLLFADDT 80

BLAST of Lcy08g009970 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.6e-11
Identity = 39/118 (33.05%), Postives = 60/118 (50.85%), Query Frame = 0

Query: 144 GSSELKHRIHWCKWEKLCKPKEVGGLNFRDLETFNKALLAKQGWRIFHNPDSTVVRILKG 203
           GS+  K + H  KW K+C PK+ GGL  R  ++ N+AL++K GWR+    +S    +L+ 
Sbjct: 76  GSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQK 135

Query: 204 KY----FPSSSLLETTCSQHSSYFWKGLICAL-DLLKAGMRRNIGNGQSINLVLDPWI 257
           KY       S  L    S  S+  W+ +   L D++  G+    G+GQ I    D W+
Sbjct: 136 KYHVGEIRDSRWLIPKGSWSST--WRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWV 191

BLAST of Lcy08g009970 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 8.1e-10
Identity = 43/151 (28.48%), Postives = 72/151 (47.68%), Query Frame = 0

Query: 3   KAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQGDP 62
           KA+D+++  +++ ++++ G     + +I+   S    +I VNGE         G RQG P
Sbjct: 610 KAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCP 669

Query: 63  LSPYLFLLCSEGLSSMLANARNNNK--AGISIASTTPKVSHLFFADDSLIFLKAQAAEFG 122
           LSPYLF +  E    +LA A    K   GI I     K+S L  ADD ++++        
Sbjct: 670 LSPYLFNIVLE----VLARAIRQQKEIKGIQIGKEEVKISLL--ADDMIVYISDPKNSTR 729

Query: 123 HFRAIMEDYERALGQCINLDKSMGSSELKHR 152
               ++  +   +G  IN +KSM     K++
Sbjct: 730 ELLNLINSFGEVVGYKINSNKSMAFLYTKNK 754

BLAST of Lcy08g009970 vs. ExPASy Swiss-Prot
Match: Q05118 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.4e-07
Identity = 43/141 (30.50%), Postives = 67/141 (47.52%), Query Frame = 0

Query: 3   KAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQGDP 62
           KA+D V    ++  M   G    + + I   I+    +I+V G          G++QGDP
Sbjct: 32  KAFDTVSHPAILRAMRAFGIDDGMQDFIMSTITDAYTNIVVGGRTTNKIYIRNGVKQGDP 91

Query: 63  LSPYLFLLCSEGLSSMLANARNNNKAGISIASTTP--KVSHLFFADDSLIFLKAQAAEFG 122
           LSP LF +  + L + L    N+ + G   AS TP  K++ L FADD L+ L+ +  +  
Sbjct: 92  LSPVLFNIVLDELVTRL----NDEQPG---ASMTPACKIASLAFADD-LLLLEDRDIDVP 151

Query: 123 HFRAIMEDYERALGQCINLDK 142
           +  A    Y R  G  +N +K
Sbjct: 152 NSLATTCAYFRTRGMTLNPEK 164

BLAST of Lcy08g009970 vs. ExPASy TrEMBL
Match: A0A803PHH5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 125/275 (45.45%), Postives = 171/275 (62.18%), Query Frame = 0

Query: 1    MSKAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQG 60
            MSKAYDRVEWS+L+ +M  LG+    +E I  C++S SFS+++NGE  G F  +RGLRQG
Sbjct: 966  MSKAYDRVEWSFLMTMMRGLGYDERWIEKIMRCVTSVSFSVLINGERIGKFHPSRGLRQG 1025

Query: 61   DPLSPYLFLLCSEGLSSMLANA-RNNNKAGISIASTTPKVSHLFFADDSLIFLKAQAAEF 120
            D LSPYLFL+CSEGL  ++  A R      +        VSHLFFADDS +F + + AE 
Sbjct: 1026 DSLSPYLFLICSEGLCCLIQEAERAGRVTRVRFGRNDVTVSHLFFADDSFVFFEGKEAEC 1085

Query: 121  GHFRAIMEDYERALGQCINLDKS---------------MGSSELKHRIHWCKWEKLCKPK 180
               + I + YER  GQ INL+KS                G ++  H++HW  W+K+CKPK
Sbjct: 1086 KTMKQIFQQYERLSGQKINLEKSEKLIKNLHSLAANFWWGDTKEHHKLHWSTWDKMCKPK 1145

Query: 181  EVGGLNFRDLETFNKALLAKQGWRIFHNPDSTVVRILKGKYFPSSSLLETTCSQHSSYFW 240
            E GGL FR L  FN+ALLAKQGW + H P S + R+LK  Y+P++S L   C Q++S  W
Sbjct: 1146 EEGGLGFRSLAEFNQALLAKQGWHLIHKPHSLLARVLKHSYYPNTSFLNAKCPQNASCIW 1205

Query: 241  KGLICALDLLKAGMRRNIGNGQSINLVLDPWIPMP 260
            KG++   +++  G R  +GNG++I +  D W+P P
Sbjct: 1206 KGIVWGREIIYEGARWRVGNGRTIRVWQDKWLPRP 1240

BLAST of Lcy08g009970 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 2.2e-66
Identity = 131/302 (43.38%), Postives = 178/302 (58.94%), Query Frame = 0

Query: 1    MSKAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQG 60
            +SKA+DRVEW+YL  IM K+GF    ++ I  CIS+  FSI +NG   G F  +RG+RQG
Sbjct: 739  LSKAFDRVEWTYLECIMRKMGFNEGWIQAIIQCISTVRFSIHLNGSPGGCFQPSRGIRQG 798

Query: 61   DPLSPYLFLLCSEGLSSMLANARNNNK-AGISIASTTPKVSHLFFADDSLIFLKAQAAEF 120
            DPLSPYLFLLC+EGLS+++ +  N+ +  GI        ++HL FADDSLIFL++  +E 
Sbjct: 799  DPLSPYLFLLCAEGLSALINHENNSGRLTGIHFEENNTSITHLLFADDSLIFLRSLESEC 858

Query: 121  GHFRAIMEDYERALGQCINLDKS-------------------MGSSELKH---------- 180
               R +++ Y RA GQCIN  KS                   +    + H          
Sbjct: 859  LALRRLLDSYGRASGQCINFSKSALLFSPNVHPERQQYLQCILNVKLVSHFGNYLGLPSH 918

Query: 181  ---------RIHWCKWEKLCKPKEVGGLNFRDLETFNKALLAKQGWRIFHNPDSTVVRIL 240
                     ++HW KW ++C PKE GGLNFRDLE FN+AL+AK  WR   +P+  V ++L
Sbjct: 919  FTRRRGESRKLHWMKWGRMCYPKECGGLNFRDLEGFNQALVAKHVWRFLQHPNLLVSKVL 978

Query: 241  KGKYFPSSSLLETTCSQHSSYFWKGLICALDLLKAGMRRNIGNGQSINLVLDPWIPMPQT 264
            K KYF  +SLL+ + +  SSYFWKG +   DLL  G+R  +GNG +I    DPW+P P T
Sbjct: 979  KHKYFKDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTT 1038

BLAST of Lcy08g009970 vs. ExPASy TrEMBL
Match: A0A2N9H9S6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS36216 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 3.5e-64
Identity = 137/327 (41.90%), Postives = 182/327 (55.66%), Query Frame = 0

Query: 1   MSKAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQG 60
           MSKAYDRVEW +L AI+ KLGF    V+LI  C++STS+S+IVNG   G+   +RGLRQG
Sbjct: 563 MSKAYDRVEWHFLQAILLKLGFHRRWVDLIMTCVTSTSYSVIVNGAPHGYIKPSRGLRQG 622

Query: 61  DPLSPYLFLLCSEGLSSMLANA-RNNNKAGISIASTTPKVSHLFFADDSLIFLKAQAAEF 120
           DPLSPYLFLLC+EGLS+++  A R     GI+I    P++SHLFFADDS+IF +A   + 
Sbjct: 623 DPLSPYLFLLCAEGLSALIRKAEREKAIRGIAICRGGPRLSHLFFADDSVIFCRASQHDG 682

Query: 121 GHFRAIMEDYERALGQCINLDKS------------------------------------- 180
           G   AI++ YERA GQ IN  K+                                     
Sbjct: 683 GALYAILKLYERASGQKINEAKTAIFFSKNTPNSIRANILSMFGTSSSSKFEKQLFRQSI 742

Query: 181 ------------------------MGSSELKHRIHWCKWEKLCKPKEVGGLNFRDLETFN 240
                                    G    + RIHW    KL +PK+ GG+ FRDL+ FN
Sbjct: 743 YAMSCFKLPAGLCDEIYSLANQFWWGQRNGERRIHWTNKAKLIRPKQEGGMGFRDLQLFN 802

Query: 241 KALLAKQGWRIFHNPDSTVVRILKGKYFPSSSLLETTCSQHSSYFWKGLICALDLLKAGM 266
           +ALLA+QGWR+   P S + RILK KYFP +S LE   + ++SY W+ +  A  +L+ G+
Sbjct: 803 RALLARQGWRLLQQPHSLIFRILKAKYFPHTSFLEAQVTGNASYIWRSICEARHVLRDGL 862

BLAST of Lcy08g009970 vs. ExPASy TrEMBL
Match: M5XSK0 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa016553mg PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.5e-62
Identity = 141/372 (37.90%), Postives = 184/372 (49.46%), Query Frame = 0

Query: 1   MSKAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQG 60
           MSKAYDR+EWS+L AIM KLGF    ++L+  CIS+ S+S ++NG   GF   +RGLRQG
Sbjct: 222 MSKAYDRIEWSFLEAIMRKLGFAEQWIQLMLTCISTVSYSFVINGTPHGFLHPSRGLRQG 281

Query: 61  DPLSPYLFLLCSEGLSSMLA-NARNNNKAGISIASTTPKVSHLFFADDSLIFLKAQAAEF 120
           DPLSPYLFLLC+EGL++++A   R     G+SI    P +SHLFFADDS +F  A  A+ 
Sbjct: 282 DPLSPYLFLLCAEGLTALIAQKEREGFLKGVSICRGAPAISHLFFADDSFLFAWANMADC 341

Query: 121 GHFRAIMEDYERALGQCIN----------------------------------------- 180
              + I++ YERALGQ +N                                         
Sbjct: 342 MALKDILDTYERALGQQVNFQKSAVCFSKNVHRGDQLMLAQFMGIPCVDHHSQYLGLPMV 401

Query: 181 LDKSMGSS--ELKHR--------------------------------------------- 240
           LDK  G+S   LK R                                             
Sbjct: 402 LDKKKGASFNHLKERLWKKLQTWKGKLLSGAGKEILIKVVAQAIPIYTMSCFLLPKYVCE 461

Query: 241 -------------------IHWCKWEKLCKPKEVGGLNFRDLETFNKALLAKQGWRIFHN 265
                              IHW  W++LC PKE GGL FR+L  FN ALLAKQGWR+  N
Sbjct: 462 DLNKLVAQFWWNSSTENKKIHWMAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQN 521

BLAST of Lcy08g009970 vs. ExPASy TrEMBL
Match: A0A2N9IKR1 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52423 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.9e-62
Identity = 136/343 (39.65%), Postives = 183/343 (53.35%), Query Frame = 0

Query: 1    MSKAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQG 60
            MSKAYDRVEWSYL A+M K+GF    V+L+  CIS+ S+SI++NG   G    +RGLRQG
Sbjct: 783  MSKAYDRVEWSYLKAVMLKMGFDCRWVDLMMECISTVSYSILLNGTPTGHIIPSRGLRQG 842

Query: 61   DPLSPYLFLLCSEGLSSMLANARNNNK-AGISIASTTPKVSHLFFADDSLIFLKAQAAEF 120
            DPLSPYLFL+C+EG +S++  A N     GISI+   P+ SHLFFADDS+IF +A+  E 
Sbjct: 843  DPLSPYLFLICAEGFTSLIRKAENQKLIQGISISRGGPRFSHLFFADDSIIFCRAKIEEC 902

Query: 121  GHFRAIMEDYERALGQCINLDKS------------------------------------- 180
               R I++ YE A GQ +N++K+                                     
Sbjct: 903  RALREILKLYEDASGQKLNMEKTSLFFSANTPEAVKEEIQTEMGVLSMNQMEKYLGLPPI 962

Query: 181  -----------------------------------------MGSSELKHRIHWCKWEKLC 240
                                                      G  + + RIHW  W+KL 
Sbjct: 963  IAGKEVLIKAVAQAIPTYAMSVFQLPVACSNEINSMLSNYWWGQKQGERRIHWMGWKKLA 1022

Query: 241  KPKEVGGLNFRDLETFNKALLAKQGWRIFHNPDSTVVRILKGKYFPSSSLLETTCSQHSS 265
            + K+VGG+ FRDL+ FN ALLA+Q WR+ HNP S V R+LK KYFP+SS LE   S  +S
Sbjct: 1023 RSKKVGGMGFRDLKLFNSALLARQCWRLLHNPHSLVFRVLKSKYFPNSSFLEAKMSPTAS 1082

BLAST of Lcy08g009970 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 262.3 bits (669), Expect = 4.5e-66
Identity = 131/302 (43.38%), Postives = 178/302 (58.94%), Query Frame = 0

Query: 1    MSKAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQG 60
            +SKA+DRVEW+YL  IM K+GF    ++ I  CIS+  FSI +NG   G F  +RG+RQG
Sbjct: 739  LSKAFDRVEWTYLECIMRKMGFNEGWIQAIIQCISTVRFSIHLNGSPGGCFQPSRGIRQG 798

Query: 61   DPLSPYLFLLCSEGLSSMLANARNNNK-AGISIASTTPKVSHLFFADDSLIFLKAQAAEF 120
            DPLSPYLFLLC+EGLS+++ +  N+ +  GI        ++HL FADDSLIFL++  +E 
Sbjct: 799  DPLSPYLFLLCAEGLSALINHENNSGRLTGIHFEENNTSITHLLFADDSLIFLRSLESEC 858

Query: 121  GHFRAIMEDYERALGQCINLDKS-------------------MGSSELKH---------- 180
               R +++ Y RA GQCIN  KS                   +    + H          
Sbjct: 859  LALRRLLDSYGRASGQCINFSKSALLFSPNVHPERQQYLQCILNVKLVSHFGNYLGLPSH 918

Query: 181  ---------RIHWCKWEKLCKPKEVGGLNFRDLETFNKALLAKQGWRIFHNPDSTVVRIL 240
                     ++HW KW ++C PKE GGLNFRDLE FN+AL+AK  WR   +P+  V ++L
Sbjct: 919  FTRRRGESRKLHWMKWGRMCYPKECGGLNFRDLEGFNQALVAKHVWRFLQHPNLLVSKVL 978

Query: 241  KGKYFPSSSLLETTCSQHSSYFWKGLICALDLLKAGMRRNIGNGQSINLVLDPWIPMPQT 264
            K KYF  +SLL+ + +  SSYFWKG +   DLL  G+R  +GNG +I    DPW+P P T
Sbjct: 979  KHKYFKDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTT 1038

BLAST of Lcy08g009970 vs. NCBI nr
Match: XP_030483251.1 (uncharacterized protein LOC115699848 [Cannabis sativa])

HSP 1 Score: 255.8 bits (652), Expect = 4.2e-64
Identity = 129/304 (42.43%), Postives = 170/304 (55.92%), Query Frame = 0

Query: 1   MSKAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQG 60
           MSKAY+RVEWS+L+ +M  LG+    VE I  C++S SFS+++NGE  G F  TRGLRQG
Sbjct: 7   MSKAYNRVEWSFLITMMRGLGYEEKWVEKIMKCVTSLSFSVLINGEKIGRFQPTRGLRQG 66

Query: 61  DPLSPYLFLLCSEGLSSMLANARNNNKA-GISIASTTPKVSHLFFADDSLIFLKAQAAEF 120
           D LSPYLFL+C EGLS ++       +  G+   S   KVSHLF  DDS +FL  +  E 
Sbjct: 67  DSLSPYLFLICLEGLSCLIHEVERAGRINGVQFGSNRVKVSHLFLVDDSFMFLDIRENEC 126

Query: 121 GHFRAIMEDYERALGQCINLDKS------------------------------------- 180
            + + I++ Y R  GQ INLDKS                                     
Sbjct: 127 DNMKLILQRYARLSGQQINLDKSEVCMGKRVPITQGHALAARLGVRLVSHHAKYLGLPSF 186

Query: 181 -------MGSSELKHRIHWCKWEKLCKPKEVGGLNFRDLETFNKALLAKQGWRIFHNPDS 240
                   G ++   ++HW  W+KLCKPKE GGL FR L  FN+ALLAKQGWR+ HNP S
Sbjct: 187 VGRRKKEWGDTKDNKKLHWSSWDKLCKPKEDGGLGFRSLTEFNQALLAKQGWRLIHNPHS 246

Query: 241 TVVRILKGKYFPSSSLLETTCSQHSSYFWKGLICALDLLKAGMRRNIGNGQSINLVLDPW 260
            +  +LK  YFP+SS +E  C   +S+ WKG+I    +L  G R  +GNG++I +  D W
Sbjct: 247 LLAGVLKNSYFPTSSFMEAKCPPRASWVWKGIIWGRKILSEGARWRVGNGRNIRVWEDKW 306

BLAST of Lcy08g009970 vs. NCBI nr
Match: XP_034218997.1 (uncharacterized protein LOC117630370 [Prunus dulcis])

HSP 1 Score: 247.3 bits (630), Expect = 1.5e-61
Identity = 139/372 (37.37%), Postives = 182/372 (48.92%), Query Frame = 0

Query: 1   MSKAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQG 60
           MSKAYDR+EWS+L AIM KLGF    ++L+  CIS+ S+S ++NG   GF   +RGLRQG
Sbjct: 406 MSKAYDRIEWSFLEAIMRKLGFAEQWIQLMLTCISTVSYSFVINGTPHGFLHPSRGLRQG 465

Query: 61  DPLSPYLFLLCSEGLSSMLA-NARNNNKAGISIASTTPKVSHLFFADDSLIFLKAQAAEF 120
           DPLSPYLFLLC+EGL++++A   R     G+SI    P +SHLFFADDS +F +A  A+ 
Sbjct: 466 DPLSPYLFLLCAEGLTALIAQKEREGFLKGVSICRGAPAISHLFFADDSFLFARANMADC 525

Query: 121 GHFRAIMEDYERALGQCIN----------------------------------------- 180
              + I++ YERA GQ +N                                         
Sbjct: 526 MVLKDILDTYERASGQQVNFQKSAVCFCKNVHRGDQLMLAQFMGIPCVDHHSQYLGLPMV 585

Query: 181 LDKSMGSS--ELKHR--------------------------------------------- 240
           LDK  G+S   LK R                                             
Sbjct: 586 LDKKKGASFNHLKERLWKKLQTWKGKLLSGAGKEILIKVVAQAIPIYTMSYFLLPKYVCE 645

Query: 241 -------------------IHWCKWEKLCKPKEVGGLNFRDLETFNKALLAKQGWRIFHN 265
                              IHW  W++LC PKE GGL FR+L  FN ALLAKQGWR+  N
Sbjct: 646 DLNKLVAQFWWNSSTGNKKIHWMAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQN 705

BLAST of Lcy08g009970 vs. NCBI nr
Match: XP_022545039.1 (uncharacterized protein LOC106355059 [Brassica napus])

HSP 1 Score: 246.9 bits (629), Expect = 2.0e-61
Identity = 130/298 (43.62%), Postives = 174/298 (58.39%), Query Frame = 0

Query: 1    MSKAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQG 60
            MSKAYDRVEW++L A++ K+GF    V  IR C+SS S+ I+VNGE +G    TRGLRQG
Sbjct: 886  MSKAYDRVEWNFLEALLLKMGFADIWVSWIRWCVSSVSYQILVNGEPKGNIQPTRGLRQG 945

Query: 61   DPLSPYLFLLCSEGLSSMLANARNNNK-AGISIASTTPKVSHLFFADDSLIFLKAQAAEF 120
            DPLSP+LF+L +E L+S L  A    + +G+ IA  +P VSHL FADDSL F KA   + 
Sbjct: 946  DPLSPFLFILLTEALTSQLKGAEEEGRISGLKIARASPSVSHLLFADDSLFFCKADVQQC 1005

Query: 121  GHFRAIMEDYERALGQCIN-------------------LDKSMG---------------- 180
                 I+  Y RA GQ +N                   L K++G                
Sbjct: 1006 AELMRIINLYGRASGQQLNPGKSSILFGSKVDQDLKRTLKKTLGIQKEGGIINKLQGAIA 1065

Query: 181  ----SSELKHR-IHWCKWEKLCKPKEVGGLNFRDLETFNKALLAKQGWRIFHNPDSTVVR 240
                S++  +R +HW  WEK+C   + GGL FRDL  FN ALLAKQ WR+ H+P+S + R
Sbjct: 1066 KFWWSTKANNRGLHWIAWEKICLSFDKGGLGFRDLHDFNLALLAKQLWRLLHHPNSLLAR 1125

Query: 241  ILKGKYFPSSSLLETTCSQHSSYFWKGLICALDLLKAGMRRNIGNGQSINLVLDPWIP 258
            +LKG+YF   S +E   S   SY W+ ++ A DLL+ G+++ IG+G S  + LDPWIP
Sbjct: 1126 VLKGRYFRHCSPMEVRSSNSPSYGWRSILAAQDLLREGLKKTIGSGSSTRVWLDPWIP 1183

BLAST of Lcy08g009970 vs. NCBI nr
Match: XP_024190158.1 (uncharacterized protein LOC112194141 [Rosa chinensis])

HSP 1 Score: 246.5 bits (628), Expect = 2.6e-61
Identity = 121/311 (38.91%), Postives = 174/311 (55.95%), Query Frame = 0

Query: 1   MSKAYDRVEWSYLVAIMDKLGFPSDLVELIRGCISSTSFSIIVNGEARGFFGATRGLRQG 60
           +SKAYDR+EW +L  IM K+GF    V LI  C+S+  FS ++NG  RG+    RGLRQG
Sbjct: 138 ISKAYDRLEWGFLQRIMIKMGFAEQWVALIMSCLSTVRFSFLINGTPRGYVTPQRGLRQG 197

Query: 61  DPLSPYLFLLCSEGLSSMLANARNNNK-AGISIASTTPKVSHLFFADDSLIFLKAQAAEF 120
           DPLSPYLFLLC+EGLS+++++  +N +  G+ +    P +SHL FADDS+++  A   + 
Sbjct: 198 DPLSPYLFLLCAEGLSALISHVVSNGQWQGLRVCDGAPSISHLLFADDSMLYFYATIQDC 257

Query: 121 GHFRAIMEDYERALGQCINLDKS------------------------------------- 180
              R ++  YE+A GQ +NL KS                                     
Sbjct: 258 LMIRNVLNIYEKASGQQVNLQKSNVVFSGSVLPHLRVSMAQVLRVQVVDKHDKYLGIPTL 317

Query: 181 -----------------MGSSELKHRIHWCKWEKLCKPKEVGGLNFRDLETFNKALLAKQ 240
                             GS++ K  +HW  W++LCKPK +GG+ FR L  FN A+LAKQ
Sbjct: 318 VWQNLIQELHQLCAQFWWGSTDEKKAMHWRAWDELCKPKSLGGMGFRHLFAFNLAMLAKQ 377

Query: 241 GWRIFHNPDSTVVRILKGKYFPSSSLLETTCSQHSSYFWKGLICALDLLKAGMRRNIGNG 257
           GWR+  NP+S + ++LK  YFP S+  E +     SY W+ ++   D+L+ G++R+IGNG
Sbjct: 378 GWRLIQNPNSLIGQLLKALYFPQSNFWEASLGSQPSYAWRSILQGRDILRTGIKRHIGNG 437

BLAST of Lcy08g009970 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25
Identity = 56/120 (46.67%), Postives = 75/120 (62.50%), Query Frame = 0

Query: 145 SSELKHRIHWCKWEKLCKPKE-VGGLNFRDLETFNKALLAKQGWRIFHNPDSTVVRILKG 204
           S E K +I W  W+KLCK KE  GGL FRDL  FN+ALLAKQ +RI H P + + R+L+ 
Sbjct: 32  SCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRS 91

Query: 205 KYFPSSSLLETTCSQHSSYFWKGLICALDLLKAGMRRNIGNGQSINLVLDPWI----PMP 260
           +YFP SS++E +     SY W+ +I   +LL  G+ R IG+G    + LD WI    P+P
Sbjct: 92  RYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWIMDETPLP 151

BLAST of Lcy08g009970 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-18
Identity = 37/105 (35.24%), Postives = 58/105 (55.24%), Query Frame = 0

Query: 152 IHWCKWEKLCKPKEVGGLNFRDLETFNKALLAKQGWRIFHNPDSTVVRILKGKYFPSSSL 211
           +HW  W+ L   K  GG+ F+D+E FN ALL KQ WR+   P+S + ++ K +YF  S  
Sbjct: 39  MHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDP 98

Query: 212 LETTCSQHSSYFWKGLICALDLLKAGMRRNIGNGQSINLVLDPWI 257
           L        S+ WK +  + ++L+ G R  +GNG+ I +    W+
Sbjct: 99  LNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWL 143

BLAST of Lcy08g009970 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-13
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 42  IVNGEARGFFGATRGLRQGDPLSPYLFLLCSEGLSSMLANARNNNK-AGISIASTTPKVS 101
           I+NG  +G    +RGLRQGDPLSPYLF+LC+E LS +   A+   +  GI +++ +P+++
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 102 HLFFADDS 109
           HL FADD+
Sbjct: 73  HLLFADDT 80

BLAST of Lcy08g009970 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-05
Identity = 21/53 (39.62%), Postives = 31/53 (58.49%), Query Frame = 0

Query: 201 LKGKYFPSSSLLETTCSQHSSYFWKGLICALDLLKAGMRRNIGNGQSINLVLD 254
           +K +YF   S+L+    +  SY W  L+  + LLK G R  IG+GQ+I + LD
Sbjct: 1   MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLD 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P932951.5e-2446.67Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
P925552.3e-1248.53Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 ... [more]
P0C2F69.6e-1133.05Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
P113698.1e-1028.48LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... [more]
Q051186.4e-0730.50Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra... [more]
Match NameE-valueIdentityDescription
A0A803PHH52.6e-6745.45Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1DX302.2e-6643.38uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A2N9H9S63.5e-6441.90Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS36216 PE=4 SV=1[more]
M5XSK01.5e-6237.90Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU... [more]
A0A2N9IKR11.9e-6239.65Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
Match NameE-valueIdentityDescription
XP_022158377.14.5e-6643.38uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_030483251.14.2e-6442.43uncharacterized protein LOC115699848 [Cannabis sativa][more]
XP_034218997.11.5e-6137.37uncharacterized protein LOC117630370 [Prunus dulcis][more]
XP_022545039.12.0e-6143.62uncharacterized protein LOC106355059 [Brassica napus][more]
XP_024190158.12.6e-6138.91uncharacterized protein LOC112194141 [Rosa chinensis][more]
Match NameE-valueIdentityDescription
ATMG00310.11.1e-2546.67RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G29090.12.2e-1835.24Ribonuclease H-like superfamily protein [more]
ATMG01250.11.6e-1348.53RNA-directed DNA polymerase (reverse transcriptase) [more]
AT3G09510.12.8e-0539.62Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 2..143
e-value: 5.2E-22
score: 78.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..159
score: 11.335497
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 1..143
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 1..143
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 151..262
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 151..262
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..163

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy08g009970.1Lcy08g009970.1mRNA