Lcy08g009770 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAGATTATGAGCATGCTTCGGGTCAATGCATTAATCTGGACAAATCAATGGTTTGTTTCTCTAAAAATGTGTCTGTTGATACTGGAGCTTACCTTGGTTATATCCTTCAGATGAAAGTGGTGACGAGTCTGGGCTCTTATTTGGGCATGCCGTCAGCATTCCACAGAGGTAAATGTAAGGAGTTCAAATGCGTGCTGGACAGAGTTTGGTCAAAATTACAAGGGTGGAAACAAAGCTTTTTCTCAACTGGGGGAAAGGAGGTTCTTATTAAAAGTGTCGTCCAAGCTATTCCCACATATGCTATGGGATGTTTTAGACTTCCTAAGGGGATCTTGTCCAAAATTTATGCATTATGTGCAAAGTTTTGGTGGGGTACAACGGAACAGAAACGTCGCATCCACTGGTGTAAGTGGGGAGAGTTGTGTAAACCCAAGGAGATTGGTGGGCTGAATTTTAGGGATTTGGAAGTTTTTAACCAAGCTTTGTTGGCTAAGCAGGCTTGGAGAGTTTTCCACAATCCCAATTCTACTGTTCCTAGAATTCTTAAGGGACGATATTTTCCATCGTCGTCCCTATTAGATGCCGAGGTACAATCTAACTCTTCCTATTTTTGGAAAGGATTTATGTGGGGGTTGGATCTTTTAAAGGAGGGTCTTCGGAAGAATATTGGTGATGGGCGATCTATCAAGTTGGTTCTTGACCCTTGGATTCCTCGGCCTAATACATTTAAGGGTATTAGGACAGAAATGGGCTTAGGTAGATATGTTGGTATCTGATTATATCACCCCAACGGGAAGTTGGGATGTGGATAAGCTCCGTTTGGATTTATGGGAGGATGATGTACAGGAGATCATTCGTATTCCAATTAGCCGACAAGCACCTGATTCATGAATCTGGCATTATGACAAGCATGGGATGTATTCTGTTAAAAGTGGGTATAAATTGGGTATGCTCTTGAAATGTGATGCTTCGCCATCTTGTAGGGATAAAGATCACAAATGGTGGACTCGGCTATGGAAACTACAACTACCAACAAAAATTATACTTTTTGTTTGGAGATCTTTCCAAGGTTGCATTCCGTGTGCTGTCAACTTGGGGAGGCATCATGTCCCGGTTGATGGGGTATGCTCGTTGTGCTTGGAGGTACCTGAAACATCAGACCACGCACTTTTTCAGTGTCATAGAGCAAAGGAAGTGTGGACAAGTATCACGAGTATTGGAGAGAGAATCTCATATCCATCTTATTCATCAATAA ATGTTAGATTATGAGCATGCTTCGGGTCAATGCATTAATCTGGACAAATCAATGGTTTGTTTCTCTAAAAATGTGTCTGTTGATACTGGAGCTTACCTTGGTTATATCCTTCAGATGAAAGTGGTGACGAGTCTGGGCTCTTATTTGGGCATGCCGTCAGCATTCCACAGAGGTAAATGTAAGGAGTTCAAATGCGTGCTGGACAGAGTTTGGTCAAAATTACAAGGGTGGAAACAAAGCTTTTTCTCAACTGGGGGAAAGGAGGTTCTTATTAAAAGTGTCGTCCAAGCTATTCCCACATATGCTATGGGATGTTTTAGACTTCCTAAGGGGATCTTGTCCAAAATTTATGCATTATGTGCAAAGTTTTGGTGGGGTACAACGGAACAGAAACGTCGCATCCACTGGTGTAAGTGGGGAGAGTTGTGTAAACCCAAGGAGATTGGTGGGCTGAATTTTAGGGATTTGGAAGTTTTTAACCAAGCTTTGTTGGCTAAGCAGGCTTGGAGAGTTTTCCACAATCCCAATTCTACTGTTCCTAGAATTCTTAAGGGACGATATTTTCCATCGTCGTCCCTATTAGATGCCGAGGTACAATCTAACTCTTCCTATTTTTGGAAAGGATTTATGTGGGGGTTGGATCTTTTAAAGGAGGGTCTTCGGAAGAATATTGGTGATGGGCGATCTATCAAGTTGGTTCTTGACCCTTGGATTCCTCGGCCTAATACATTTAAGGGGATAAAGATCACAAATGGTGGACTCGGCTATGGAAACTACAACTACCAACAAAAATTATACTTTTTGTTTGGAGATCTTTCCAAGGTTGCATTCCGTGTGCTGTCAACTTGGGGAGGCATCATGTCCCGGTTGATGGGGTATGCTCGTTGTGCTTGGAGGTACCTGAAACATCAGACCACGCACTTTTTCAGTGTCATAGAGCAAAGGAAGTGTGGACAAGTATCACGAGTATTGGAGAGAGAATCTCATATCCATCTTATTCATCAATAA ATGTTAGATTATGAGCATGCTTCGGGTCAATGCATTAATCTGGACAAATCAATGGTTTGTTTCTCTAAAAATGTGTCTGTTGATACTGGAGCTTACCTTGGTTATATCCTTCAGATGAAAGTGGTGACGAGTCTGGGCTCTTATTTGGGCATGCCGTCAGCATTCCACAGAGGTAAATGTAAGGAGTTCAAATGCGTGCTGGACAGAGTTTGGTCAAAATTACAAGGGTGGAAACAAAGCTTTTTCTCAACTGGGGGAAAGGAGGTTCTTATTAAAAGTGTCGTCCAAGCTATTCCCACATATGCTATGGGATGTTTTAGACTTCCTAAGGGGATCTTGTCCAAAATTTATGCATTATGTGCAAAGTTTTGGTGGGGTACAACGGAACAGAAACGTCGCATCCACTGGTGTAAGTGGGGAGAGTTGTGTAAACCCAAGGAGATTGGTGGGCTGAATTTTAGGGATTTGGAAGTTTTTAACCAAGCTTTGTTGGCTAAGCAGGCTTGGAGAGTTTTCCACAATCCCAATTCTACTGTTCCTAGAATTCTTAAGGGACGATATTTTCCATCGTCGTCCCTATTAGATGCCGAGGTACAATCTAACTCTTCCTATTTTTGGAAAGGATTTATGTGGGGGTTGGATCTTTTAAAGGAGGGTCTTCGGAAGAATATTGGTGATGGGCGATCTATCAAGTTGGTTCTTGACCCTTGGATTCCTCGGCCTAATACATTTAAGGGGATAAAGATCACAAATGGTGGACTCGGCTATGGAAACTACAACTACCAACAAAAATTATACTTTTTGTTTGGAGATCTTTCCAAGGTTGCATTCCGTGTGCTGTCAACTTGGGGAGGCATCATGTCCCGGTTGATGGGGTATGCTCGTTGTGCTTGGAGGTACCTGAAACATCAGACCACGCACTTTTTCAGTGTCATAGAGCAAAGGAAGTGTGGACAAGTATCACGAGTATTGGAGAGAGAATCTCATATCCATCTTATTCATCAATAA MLDYEHASGQCINLDKSMVCFSKNVSVDTGAYLGYILQMKVVTSLGSYLGMPSAFHRGKCKEFKCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPKGILSKIYALCAKFWWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWRVFHNPNSTVPRILKGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWIPRPNTFKGIKITNGGLGYGNYNYQQKLYFLFGDLSKVAFRVLSTWGGIMSRLMGYARCAWRYLKHQTTHFFSVIEQRKCGQVSRVLERESHIHLIHQ Homology
BLAST of Lcy08g009770 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.4e-37 Identity = 70/143 (48.95%), Postives = 95/143 (66.43%), Query Frame = 0
BLAST of Lcy08g009770 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 2.3e-25 Identity = 60/192 (31.25%), Postives = 103/192 (53.65%), Query Frame = 0
BLAST of Lcy08g009770 vs. ExPASy TrEMBL
Match: A0A803PWX1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 3.6e-74 Identity = 121/242 (50.00%), Postives = 174/242 (71.90%), Query Frame = 0
BLAST of Lcy08g009770 vs. ExPASy TrEMBL
Match: A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 5.2e-73 Identity = 121/242 (50.00%), Postives = 172/242 (71.07%), Query Frame = 0
BLAST of Lcy08g009770 vs. ExPASy TrEMBL
Match: A0A803PV25 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 4.4e-72 Identity = 121/242 (50.00%), Postives = 172/242 (71.07%), Query Frame = 0
BLAST of Lcy08g009770 vs. ExPASy TrEMBL
Match: A0A803Q154 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 9.8e-72 Identity = 119/241 (49.38%), Postives = 166/241 (68.88%), Query Frame = 0
BLAST of Lcy08g009770 vs. ExPASy TrEMBL
Match: A0A803PPQ0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 8.3e-71 Identity = 122/239 (51.05%), Postives = 162/239 (67.78%), Query Frame = 0
BLAST of Lcy08g009770 vs. NCBI nr
Match: XP_030505362.1 (uncharacterized protein LOC115720349 [Cannabis sativa]) HSP 1 Score: 271.2 bits (692), Expect = 1.2e-68 Identity = 117/239 (48.95%), Postives = 162/239 (67.78%), Query Frame = 0
BLAST of Lcy08g009770 vs. NCBI nr
Match: ONI01138.1 (hypothetical protein PRUPE_6G123900 [Prunus persica]) HSP 1 Score: 254.2 bits (648), Expect = 1.5e-63 Identity = 112/242 (46.28%), Postives = 154/242 (63.64%), Query Frame = 0
BLAST of Lcy08g009770 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis]) HSP 1 Score: 253.1 bits (645), Expect = 3.4e-63 Identity = 112/242 (46.28%), Postives = 153/242 (63.22%), Query Frame = 0
BLAST of Lcy08g009770 vs. NCBI nr
Match: XP_042939444.1 (uncharacterized protein LOC122274474 [Carya illinoinensis]) HSP 1 Score: 252.7 bits (644), Expect = 4.5e-63 Identity = 114/245 (46.53%), Postives = 157/245 (64.08%), Query Frame = 0
BLAST of Lcy08g009770 vs. NCBI nr
Match: XP_028062862.1 (uncharacterized protein LOC114266180 [Camellia sinensis]) HSP 1 Score: 252.3 bits (643), Expect = 5.9e-63 Identity = 116/242 (47.93%), Postives = 155/242 (64.05%), Query Frame = 0
BLAST of Lcy08g009770 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 157.1 bits (396), Expect = 2.4e-38 Identity = 70/143 (48.95%), Postives = 95/143 (66.43%), Query Frame = 0
BLAST of Lcy08g009770 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 128.6 bits (322), Expect = 9.1e-30 Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = 0
BLAST of Lcy08g009770 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 63.9 bits (154), Expect = 2.8e-10 Identity = 40/116 (34.48%), Postives = 63/116 (54.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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