Lcy08g009770 (gene) Sponge gourd (P93075) v1

Overview
NameLcy08g009770
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr08: 27342987 .. 27344245 (-)
RNA-Seq ExpressionLcy08g009770
SyntenyLcy08g009770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGATTATGAGCATGCTTCGGGTCAATGCATTAATCTGGACAAATCAATGGTTTGTTTCTCTAAAAATGTGTCTGTTGATACTGGAGCTTACCTTGGTTATATCCTTCAGATGAAAGTGGTGACGAGTCTGGGCTCTTATTTGGGCATGCCGTCAGCATTCCACAGAGGTAAATGTAAGGAGTTCAAATGCGTGCTGGACAGAGTTTGGTCAAAATTACAAGGGTGGAAACAAAGCTTTTTCTCAACTGGGGGAAAGGAGGTTCTTATTAAAAGTGTCGTCCAAGCTATTCCCACATATGCTATGGGATGTTTTAGACTTCCTAAGGGGATCTTGTCCAAAATTTATGCATTATGTGCAAAGTTTTGGTGGGGTACAACGGAACAGAAACGTCGCATCCACTGGTGTAAGTGGGGAGAGTTGTGTAAACCCAAGGAGATTGGTGGGCTGAATTTTAGGGATTTGGAAGTTTTTAACCAAGCTTTGTTGGCTAAGCAGGCTTGGAGAGTTTTCCACAATCCCAATTCTACTGTTCCTAGAATTCTTAAGGGACGATATTTTCCATCGTCGTCCCTATTAGATGCCGAGGTACAATCTAACTCTTCCTATTTTTGGAAAGGATTTATGTGGGGGTTGGATCTTTTAAAGGAGGGTCTTCGGAAGAATATTGGTGATGGGCGATCTATCAAGTTGGTTCTTGACCCTTGGATTCCTCGGCCTAATACATTTAAGGGTATTAGGACAGAAATGGGCTTAGGTAGATATGTTGGTATCTGATTATATCACCCCAACGGGAAGTTGGGATGTGGATAAGCTCCGTTTGGATTTATGGGAGGATGATGTACAGGAGATCATTCGTATTCCAATTAGCCGACAAGCACCTGATTCATGAATCTGGCATTATGACAAGCATGGGATGTATTCTGTTAAAAGTGGGTATAAATTGGGTATGCTCTTGAAATGTGATGCTTCGCCATCTTGTAGGGATAAAGATCACAAATGGTGGACTCGGCTATGGAAACTACAACTACCAACAAAAATTATACTTTTTGTTTGGAGATCTTTCCAAGGTTGCATTCCGTGTGCTGTCAACTTGGGGAGGCATCATGTCCCGGTTGATGGGGTATGCTCGTTGTGCTTGGAGGTACCTGAAACATCAGACCACGCACTTTTTCAGTGTCATAGAGCAAAGGAAGTGTGGACAAGTATCACGAGTATTGGAGAGAGAATCTCATATCCATCTTATTCATCAATAA

mRNA sequence

ATGTTAGATTATGAGCATGCTTCGGGTCAATGCATTAATCTGGACAAATCAATGGTTTGTTTCTCTAAAAATGTGTCTGTTGATACTGGAGCTTACCTTGGTTATATCCTTCAGATGAAAGTGGTGACGAGTCTGGGCTCTTATTTGGGCATGCCGTCAGCATTCCACAGAGGTAAATGTAAGGAGTTCAAATGCGTGCTGGACAGAGTTTGGTCAAAATTACAAGGGTGGAAACAAAGCTTTTTCTCAACTGGGGGAAAGGAGGTTCTTATTAAAAGTGTCGTCCAAGCTATTCCCACATATGCTATGGGATGTTTTAGACTTCCTAAGGGGATCTTGTCCAAAATTTATGCATTATGTGCAAAGTTTTGGTGGGGTACAACGGAACAGAAACGTCGCATCCACTGGTGTAAGTGGGGAGAGTTGTGTAAACCCAAGGAGATTGGTGGGCTGAATTTTAGGGATTTGGAAGTTTTTAACCAAGCTTTGTTGGCTAAGCAGGCTTGGAGAGTTTTCCACAATCCCAATTCTACTGTTCCTAGAATTCTTAAGGGACGATATTTTCCATCGTCGTCCCTATTAGATGCCGAGGTACAATCTAACTCTTCCTATTTTTGGAAAGGATTTATGTGGGGGTTGGATCTTTTAAAGGAGGGTCTTCGGAAGAATATTGGTGATGGGCGATCTATCAAGTTGGTTCTTGACCCTTGGATTCCTCGGCCTAATACATTTAAGGGGATAAAGATCACAAATGGTGGACTCGGCTATGGAAACTACAACTACCAACAAAAATTATACTTTTTGTTTGGAGATCTTTCCAAGGTTGCATTCCGTGTGCTGTCAACTTGGGGAGGCATCATGTCCCGGTTGATGGGGTATGCTCGTTGTGCTTGGAGGTACCTGAAACATCAGACCACGCACTTTTTCAGTGTCATAGAGCAAAGGAAGTGTGGACAAGTATCACGAGTATTGGAGAGAGAATCTCATATCCATCTTATTCATCAATAA

Coding sequence (CDS)

ATGTTAGATTATGAGCATGCTTCGGGTCAATGCATTAATCTGGACAAATCAATGGTTTGTTTCTCTAAAAATGTGTCTGTTGATACTGGAGCTTACCTTGGTTATATCCTTCAGATGAAAGTGGTGACGAGTCTGGGCTCTTATTTGGGCATGCCGTCAGCATTCCACAGAGGTAAATGTAAGGAGTTCAAATGCGTGCTGGACAGAGTTTGGTCAAAATTACAAGGGTGGAAACAAAGCTTTTTCTCAACTGGGGGAAAGGAGGTTCTTATTAAAAGTGTCGTCCAAGCTATTCCCACATATGCTATGGGATGTTTTAGACTTCCTAAGGGGATCTTGTCCAAAATTTATGCATTATGTGCAAAGTTTTGGTGGGGTACAACGGAACAGAAACGTCGCATCCACTGGTGTAAGTGGGGAGAGTTGTGTAAACCCAAGGAGATTGGTGGGCTGAATTTTAGGGATTTGGAAGTTTTTAACCAAGCTTTGTTGGCTAAGCAGGCTTGGAGAGTTTTCCACAATCCCAATTCTACTGTTCCTAGAATTCTTAAGGGACGATATTTTCCATCGTCGTCCCTATTAGATGCCGAGGTACAATCTAACTCTTCCTATTTTTGGAAAGGATTTATGTGGGGGTTGGATCTTTTAAAGGAGGGTCTTCGGAAGAATATTGGTGATGGGCGATCTATCAAGTTGGTTCTTGACCCTTGGATTCCTCGGCCTAATACATTTAAGGGGATAAAGATCACAAATGGTGGACTCGGCTATGGAAACTACAACTACCAACAAAAATTATACTTTTTGTTTGGAGATCTTTCCAAGGTTGCATTCCGTGTGCTGTCAACTTGGGGAGGCATCATGTCCCGGTTGATGGGGTATGCTCGTTGTGCTTGGAGGTACCTGAAACATCAGACCACGCACTTTTTCAGTGTCATAGAGCAAAGGAAGTGTGGACAAGTATCACGAGTATTGGAGAGAGAATCTCATATCCATCTTATTCATCAATAA

Protein sequence

MLDYEHASGQCINLDKSMVCFSKNVSVDTGAYLGYILQMKVVTSLGSYLGMPSAFHRGKCKEFKCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPKGILSKIYALCAKFWWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWRVFHNPNSTVPRILKGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWIPRPNTFKGIKITNGGLGYGNYNYQQKLYFLFGDLSKVAFRVLSTWGGIMSRLMGYARCAWRYLKHQTTHFFSVIEQRKCGQVSRVLERESHIHLIHQ
Homology
BLAST of Lcy08g009770 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.4e-37
Identity = 70/143 (48.95%), Postives = 95/143 (66.43%), Query Frame = 0

Query: 97  AIPTYAMGCFRLPKGILSKIYALCAKFWWGTTEQKRRIHWCKWGELCKPKE-IGGLNFRD 156
           A+P YAM CFRL K +  K+ +   +FWW + E KR+I W  W +LCK KE  GGL FRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 157 LEVFNQALLAKQAWRVFHNPNSTVPRILKGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDL 216
           L  FNQALLAKQ++R+ H P++ + R+L+ RYFP SS+++  V +  SY W+  + G +L
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

Query: 217 LKEGLRKNIGDGRSIKLVLDPWI 239
           L  GL + IGDG   K+ LD WI
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWI 144

BLAST of Lcy08g009770 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.3e-25
Identity = 60/192 (31.25%), Postives = 103/192 (53.65%), Query Frame = 0

Query: 51  MPSAFHRGKCKEFKCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPK 110
           MP    R     F  +L+RV S++ GW++   S  G+  L K+V+ ++P ++M    LP+
Sbjct: 1   MPVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQ 60

Query: 111 GILSKIYALCAKFWWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWR 170
            IL+++  L   F WG+T +K++ H  KW ++C PK+ GGL  R  +  N+AL++K  WR
Sbjct: 61  SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWR 120

Query: 171 VFHNPNSTVPRILKGRYFPSSSLLDAE---VQSNSSYFWKGFMWGL-DLLKEGLRKNIGD 230
           +    NS    +L+ +Y     + D+     + + S  W+    GL D++  G+    GD
Sbjct: 121 LLQEKNSLWTLVLQKKYH-VGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGD 180

Query: 231 GRSIKLVLDPWI 239
           G+ I+   D W+
Sbjct: 181 GQQIRFWTDRWV 191

BLAST of Lcy08g009770 vs. ExPASy TrEMBL
Match: A0A803PWX1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.6e-74
Identity = 121/242 (50.00%), Postives = 174/242 (71.90%), Query Frame = 0

Query: 4    YEHASGQCINLDKSMVCFSKNVSVDTGAYLGYILQMKVVTSLGSYLGMPSAFHRGKCKEF 63
            Y  ASGQ +N  KS +CF + V++    +L  I+ +KVV + G YLG+PS   R K + F
Sbjct: 1254 YSKASGQLVNFHKSEMCFGRKVTLPVRTHLANIMGVKVVDNYGKYLGLPSFVGRTKKQHF 1313

Query: 64   KCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPKGILSKIYALCAKF 123
            + + ++VW+KL+GWK SFFS  GKEVLIK+V+QAIPTY M CFRLPK  ++ I+++ A+F
Sbjct: 1314 EFIKNKVWNKLKGWKGSFFSAAGKEVLIKAVIQAIPTYTMSCFRLPKKTINSIHSMAARF 1373

Query: 124  WWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWRVFHNPNSTVPRIL 183
            WWG++E+  +IHWCKW  LCK KE GGL FRDL +FNQALLAKQ WR    PNS   R+L
Sbjct: 1374 WWGSSEKDSKIHWCKWDVLCKHKEQGGLGFRDLGLFNQALLAKQVWRCIRFPNSLCSRVL 1433

Query: 184  KGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWIPRPNT 243
            K  Y+P+  +++A+  +++S+ W+  +WG  ++++G R  IG+G S++++ DPW+PRP T
Sbjct: 1434 KASYYPNGGVIEAKSGNHASFVWRSLVWGKKIIQKGYRWRIGNGNSVRVIDDPWLPRPVT 1493

Query: 244  FK 246
            FK
Sbjct: 1494 FK 1495

BLAST of Lcy08g009770 vs. ExPASy TrEMBL
Match: A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 5.2e-73
Identity = 121/242 (50.00%), Postives = 172/242 (71.07%), Query Frame = 0

Query: 4   YEHASGQCINLDKSMVCFSKNVSVDTGAYLGYILQMKVVTSLGSYLGMPSAFHRGKCKEF 63
           Y  ASGQ +N  KS +CF + VS    + L  ++ +KVV + G YLG+PS   R K + F
Sbjct: 46  YSIASGQVVNFHKSEMCFGRTVSDPLKSQLAALMGVKVVDNYGKYLGLPSFVGRTKKQHF 105

Query: 64  KCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPKGILSKIYALCAKF 123
           + +  +VW+KL+GWK SFFS  GKE+LIK++VQAIPTY M CFRLPK  ++ I+++ A+F
Sbjct: 106 EFIKTKVWNKLKGWKGSFFSAAGKEILIKAIVQAIPTYTMSCFRLPKKTINSIHSMAARF 165

Query: 124 WWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWRVFHNPNSTVPRIL 183
           WWG++E+  +IHWCKW  LCK KE GGL FRDL +FNQALLAKQ WR    PNS   ++L
Sbjct: 166 WWGSSEKDAKIHWCKWSTLCKHKEQGGLGFRDLGLFNQALLAKQIWRCIRYPNSLCSKVL 225

Query: 184 KGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWIPRPNT 243
           K  YFP+  +L+A+  +++S+ W+  +WG  ++++G R  IG+G S++++ DPW+PRP T
Sbjct: 226 KASYFPNVGVLEAKSGNHASFVWRSLVWGKKIIQKGYRWRIGNGNSVRVLEDPWLPRPVT 285

Query: 244 FK 246
           FK
Sbjct: 286 FK 287

BLAST of Lcy08g009770 vs. ExPASy TrEMBL
Match: A0A803PV25 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 4.4e-72
Identity = 121/242 (50.00%), Postives = 172/242 (71.07%), Query Frame = 0

Query: 4    YEHASGQCINLDKSMVCFSKNVSVDTGAYLGYILQMKVVTSLGSYLGMPSAFHRGKCKEF 63
            Y  ASGQ +N  KS +CF ++VS     +L   + +KVV + G YLG+PS   R K + F
Sbjct: 1261 YSIASGQLVNFHKSEMCFGRSVSAPVRTHLATFMGVKVVDNYGKYLGLPSFVGRTKKQHF 1320

Query: 64   KCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPKGILSKIYALCAKF 123
            +  +++VW+KL+GWK SFFS  GKEVLIK++VQAIPTY M CFRLPK  ++ I+++ A+F
Sbjct: 1321 E-FINKVWNKLKGWKGSFFSAAGKEVLIKAIVQAIPTYTMSCFRLPKKTINSIHSMAARF 1380

Query: 124  WWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWRVFHNPNSTVPRIL 183
            WWG++E+  +IHWCKW  LCK KE GGL FRDL +FNQALLAKQ WR    PNS   ++L
Sbjct: 1381 WWGSSEKDAKIHWCKWSVLCKHKEQGGLGFRDLGLFNQALLAKQIWRCIRYPNSLCSKVL 1440

Query: 184  KGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWIPRPNT 243
            K  Y+P+  +L+A+  +++S+ W+  +WG  +++ G R  IG+G S++++ DPW+PRP T
Sbjct: 1441 KASYYPNVGVLEAKCGNHASFVWRSLVWGKKIIQAGYRWRIGNGNSVRVLDDPWLPRPVT 1500

Query: 244  FK 246
            FK
Sbjct: 1501 FK 1501

BLAST of Lcy08g009770 vs. ExPASy TrEMBL
Match: A0A803Q154 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 9.8e-72
Identity = 119/241 (49.38%), Postives = 166/241 (68.88%), Query Frame = 0

Query: 4   YEHASGQCINLDKSMVCFSKNVSVDTGAYLGYILQMKVVTSLGSYLGMPSAFHRGKCKEF 63
           Y  ASGQ +N  KS +CF   V     + L  +L +KVV + G YLG+PS F R K + F
Sbjct: 174 YTMASGQAVNFTKSEMCFGALVDRSLRSRLAALLDVKVVNNYGKYLGLPSFFGRSKKELF 233

Query: 64  KCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPKGILSKIYALCAKF 123
           + + +RVW K++GWK S FS  GKEVLIK+++QA+P Y M CF+LPK  +  ++++ A+F
Sbjct: 234 EVIKNRVWQKVRGWKGSMFSVAGKEVLIKAILQAMPAYTMSCFQLPKSTIKSLHSMGARF 293

Query: 124 WWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWRVFHNPNSTVPRIL 183
           WWG++ +++++HWCKW  +CKPKE GGL FRDL +FNQALLAKQ WR   +P     R+L
Sbjct: 294 WWGSSARQKKVHWCKWNYMCKPKEKGGLGFRDLGLFNQALLAKQVWRCLRSPTLLSSRVL 353

Query: 184 KGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWIPRPNT 243
           K  Y+P  S+LDA+  S+SS+ W+  MWG  LL +G R  IGDG  ++++ DPW+PRP T
Sbjct: 354 KACYYPGVSVLDAKCGSHSSFMWRSMMWGKKLLLKGYRWRIGDGNGVRVLNDPWLPRPVT 413

Query: 244 F 245
           F
Sbjct: 414 F 414

BLAST of Lcy08g009770 vs. ExPASy TrEMBL
Match: A0A803PPQ0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 8.3e-71
Identity = 122/239 (51.05%), Postives = 162/239 (67.78%), Query Frame = 0

Query: 4   YEHASGQCINLDKSMVCFSKNVSVDTGAYLGYILQMKVVTSLGSYLGMPSAFHRGKCKEF 63
           Y   SGQ INLDKS VC  K +S   G      L +++VT    YLG+PS   R K + F
Sbjct: 511 YSALSGQQINLDKSEVCMGKQISSVQGQNFANRLGVRLVTHHAKYLGLPSFVGRRKKEVF 570

Query: 64  KCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPKGILSKIYALCAKF 123
           + + D+VW+KL+GWK S FS  G+E+LIK+VVQAIP+YAM CFRLPK ++  +++L A F
Sbjct: 571 EIIKDKVWNKLKGWKASMFSQAGREILIKAVVQAIPSYAMSCFRLPKKLIKNLHSLAANF 630

Query: 124 WWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWRVFHNPNSTVPRIL 183
           WWG T+  +++HWC W +LCKPKE GGL FR L  FNQALLAKQ WR+ HNP S + R+L
Sbjct: 631 WWGDTKDNKKLHWCTWDKLCKPKEEGGLGFRSLNEFNQALLAKQGWRLIHNPQSLLARVL 690

Query: 184 KGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWIPRPN 243
           K  Y+P+ S ++A   S +S  WKG  WG  +L+EG R  IG+GR  ++  D W+PRP+
Sbjct: 691 KHNYYPNVSFMEAGCPSGASCVWKGICWGRKILQEGARWRIGNGREARVWEDKWMPRPS 749

BLAST of Lcy08g009770 vs. NCBI nr
Match: XP_030505362.1 (uncharacterized protein LOC115720349 [Cannabis sativa])

HSP 1 Score: 271.2 bits (692), Expect = 1.2e-68
Identity = 117/239 (48.95%), Postives = 162/239 (67.78%), Query Frame = 0

Query: 4   YEHASGQCINLDKSMVCFSKNVSVDTGAYLGYILQMKVVTSLGSYLGMPSAFHRGKCKEF 63
           Y   SGQ INL+KS V     +S   G YL   L + +V     YLG+PS   R K + F
Sbjct: 287 YSRLSGQQINLEKSEVSMGSRISSQLGNYLANRLGVSLVGQHTKYLGLPSFIGRRKKEVF 346

Query: 64  KCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPKGILSKIYALCAKF 123
           + + D+VW+KL+ WK + FS  GKE+LIK+V+QAIP+Y+M CFRLPK ++  +++L A F
Sbjct: 347 EMIKDKVWNKLKSWKSTMFSQAGKEILIKAVIQAIPSYSMSCFRLPKKLIHSLHSLAANF 406

Query: 124 WWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWRVFHNPNSTVPRIL 183
           WWG T++ ++IHW  W +LCKPKE GGL FR L  FNQALLAKQ WR+ H+P+S + R+L
Sbjct: 407 WWGDTKENKKIHWSTWAKLCKPKEEGGLGFRSLTEFNQALLAKQGWRLIHHPHSLLARVL 466

Query: 184 KGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWIPRPN 243
           K  Y+P+SS L A+ Q  +S  W+G  WG  ++ EG R  +G+GR++++  D WIPRPN
Sbjct: 467 KHSYYPNSSFLQAKCQPGASSIWQGITWGRQIIVEGARWRVGNGRTVRIWEDKWIPRPN 525

BLAST of Lcy08g009770 vs. NCBI nr
Match: ONI01138.1 (hypothetical protein PRUPE_6G123900 [Prunus persica])

HSP 1 Score: 254.2 bits (648), Expect = 1.5e-63
Identity = 112/242 (46.28%), Postives = 154/242 (63.64%), Query Frame = 0

Query: 4   YEHASGQCINLDKSMVCFSKNVSVDTGAYLGYILQMKVVTSLGSYLGMPSAFHRGKCKEF 63
           YE  +GQ IN  KS +  S N +      +  +L + VV    +YLG+P+   +G+ + F
Sbjct: 372 YEEVTGQQINYSKSALSLSPNATRADFDMIEGVLNVPVVRCHENYLGLPTIAGKGRKQLF 431

Query: 64  KCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPKGILSKIYALCAKF 123
           + + D++W  + GWK+   S  GKE+LIK+V+QAIPTY+M CFR+PKG+  ++  + A+F
Sbjct: 432 QHLKDKLWKHISGWKEKLLSRAGKEILIKAVLQAIPTYSMSCFRIPKGLCKELNGIMARF 491

Query: 124 WWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWRVFHNPNSTVPRIL 183
           WW   + KR IHW KW  LCK K  GGL FRDLE FNQALLAKQ WR+   P S V RI 
Sbjct: 492 WWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIF 551

Query: 184 KGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWIPRPNT 243
           + RY PS   L+AEV +N S+ W+   WG +LL +GLR  +G G SI++  D W+P P+ 
Sbjct: 552 RARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLPAPSC 611

Query: 244 FK 246
           FK
Sbjct: 612 FK 613

BLAST of Lcy08g009770 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 253.1 bits (645), Expect = 3.4e-63
Identity = 112/242 (46.28%), Postives = 153/242 (63.22%), Query Frame = 0

Query: 4   YEHASGQCINLDKSMVCFSKNVSVDTGAYLGYILQMKVVTSLGSYLGMPSAFHRGKCKEF 63
           YE  SGQ IN  KS    S N +      +  +L + VV     YLG+P+   +G+ + F
Sbjct: 638 YEEVSGQQINYSKSAFSLSPNATRADFDMIKGVLNVPVVQCHEKYLGLPTIAGKGRKQLF 697

Query: 64  KCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPKGILSKIYALCAKF 123
           + + D++W  + GWK+   S  GKE+L+K+V+QAIPTY+M CFR+PKG+  ++  + A+F
Sbjct: 698 QHLKDKLWKHISGWKEKLLSRAGKEILMKAVLQAIPTYSMSCFRIPKGLCKELNGIMARF 757

Query: 124 WWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWRVFHNPNSTVPRIL 183
           WW   + KR IHW KW  LCK K  GGL FRDLE FNQALLAKQ WR+   P S V RI 
Sbjct: 758 WWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIF 817

Query: 184 KGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWIPRPNT 243
           + RY PS   L+AEV +N S+ W+   WG +LL +GLR  +G+G SI++  D W+P P+ 
Sbjct: 818 RARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLPAPSF 877

Query: 244 FK 246
           FK
Sbjct: 878 FK 879

BLAST of Lcy08g009770 vs. NCBI nr
Match: XP_042939444.1 (uncharacterized protein LOC122274474 [Carya illinoinensis])

HSP 1 Score: 252.7 bits (644), Expect = 4.5e-63
Identity = 114/245 (46.53%), Postives = 157/245 (64.08%), Query Frame = 0

Query: 1   MLDYEHASGQCINLDKSMVCFSKNVSVDTGAYLGYILQMKVVTSLGSYLGMPSAFHRGKC 60
           +  YE ASGQ +N DK+ + FS N    T   +  I  ++  +S   YLG+P+   RG+C
Sbjct: 592 LASYERASGQRLNKDKTSIFFSSNTREQTKEIVTSIAGIRGTSSYEKYLGLPALVGRGRC 651

Query: 61  KEFKCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPKGILSKIYALC 120
           + FK +LDRV ++L  WK    S  GKE LIK+V+QAIPTY+MG F+LP+ +L+++    
Sbjct: 652 QSFKGILDRVQTRLNSWKTKLLSQAGKETLIKAVIQAIPTYSMGIFKLPRQLLNELNKQV 711

Query: 121 AKFWWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWRVFHNPNSTVP 180
             FWWG  E++ RIHW  W ++ K K  GGL  RD E FN+ALLAKQ WR+  +PNS   
Sbjct: 712 RGFWWGQQEKEHRIHWVSWKQMSKSKRSGGLGMRDFEFFNRALLAKQGWRIISSPNSLAA 771

Query: 181 RILKGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWIPR 240
           R+LK +YF  S+ LD +  SNSS+ W+ F+    LLKEGL   +GDG+SI L  D W+P+
Sbjct: 772 RVLKEKYFKCSTFLDVKKGSNSSFLWQSFISARSLLKEGLVWRVGDGQSIDLWNDKWLPQ 831

Query: 241 PNTFK 246
           P +FK
Sbjct: 832 PTSFK 836

BLAST of Lcy08g009770 vs. NCBI nr
Match: XP_028062862.1 (uncharacterized protein LOC114266180 [Camellia sinensis])

HSP 1 Score: 252.3 bits (643), Expect = 5.9e-63
Identity = 116/242 (47.93%), Postives = 155/242 (64.05%), Query Frame = 0

Query: 4   YEHASGQCINLDKSMVCFSKNVSVDTGAYLGYILQMKVVTSLGSYLGMPSAFHRGKCKEF 63
           YE ASGQ INL+KS +CFSKNV +DT   L   + +  +   G YLG+P    R K   F
Sbjct: 269 YEIASGQKINLEKSAICFSKNVGMDTQVGLRNAMGVGNLVDSGKYLGLPYIVGRSKRGIF 328

Query: 64  KCVLDRVWSKLQGWKQSFFSTGGKEVLIKSVVQAIPTYAMGCFRLPKGILSKIYALCAKF 123
             V DRVW  L GWK+ + S  G+E+LIKSV Q+IPTY M CF+LP  I  +I ++   +
Sbjct: 329 NYVKDRVWKWLNGWKEKYLSAAGREILIKSVAQSIPTYIMSCFQLPDMICEEIDSMVRNY 388

Query: 124 WWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDLEVFNQALLAKQAWRVFHNPNSTVPRIL 183
           WWG  E KR+ HW  W  LC PK +GG+ FR L+ FN+ALLAKQ WR+   P+S + RIL
Sbjct: 389 WWGERESKRKNHWKNWRALCDPKWLGGMGFRSLKAFNKALLAKQGWRLISAPDSLLARIL 448

Query: 184 KGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWIPRPNT 243
           K +Y+P +S L A V SN S+ W+       LL+  LR  +GDGRSI++  D W+P+P++
Sbjct: 449 KAKYYPHTSFLQAGVGSNPSFTWRSIFNARPLLEARLRWRVGDGRSIQIWGDKWVPQPHS 508

Query: 244 FK 246
           F+
Sbjct: 509 FR 510

BLAST of Lcy08g009770 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 157.1 bits (396), Expect = 2.4e-38
Identity = 70/143 (48.95%), Postives = 95/143 (66.43%), Query Frame = 0

Query: 97  AIPTYAMGCFRLPKGILSKIYALCAKFWWGTTEQKRRIHWCKWGELCKPKE-IGGLNFRD 156
           A+P YAM CFRL K +  K+ +   +FWW + E KR+I W  W +LCK KE  GGL FRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 157 LEVFNQALLAKQAWRVFHNPNSTVPRILKGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDL 216
           L  FNQALLAKQ++R+ H P++ + R+L+ RYFP SS+++  V +  SY W+  + G +L
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

Query: 217 LKEGLRKNIGDGRSIKLVLDPWI 239
           L  GL + IGDG   K+ LD WI
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWI 144

BLAST of Lcy08g009770 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 128.6 bits (322), Expect = 9.1e-30
Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = 0

Query: 97  AIPTYAMGCFRLPKGILSKIYALCAKFWWGTTEQKRRIHWCKWGELCKPKEIGGLNFRDL 156
           A+PTY M CF LPK +  +I ++ A FWW   ++ + +HW  W  L   K  GG+ F+D+
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 157 EVFNQALLAKQAWRVFHNPNSTVPRILKGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLL 216
           E FN ALL KQ WR+   P S + ++ K RYF  S  L+A + S  S+ WK      ++L
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121

Query: 217 KEGLRKNIGDGRSIKLVLDPWI 239
           ++G R  +G+G  I +    W+
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWL 143

BLAST of Lcy08g009770 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.8e-10
Identity = 40/116 (34.48%), Postives = 63/116 (54.31%), Query Frame = 0

Query: 183 LKGRYFPSSSLLDAEVQSNSSYFWKGFMWGLDLLKEGLRKNIGDGRSIKLVLDPWI---- 242
           +K RYF   S+LDA+V+   SY W   + G+ LLK+G R  IGDG++I++ LD  +    
Sbjct: 1   MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHP 60

Query: 243 PRP----NTFKGIKITNGGLGYGNYNYQQKLYFLFGDLSKVAFRVLSTWGGIMSRL 291
           PRP     T+K + I N         +++K  + F D SK++  V  +  G + R+
Sbjct: 61  PRPLNTEETYKEMTINN--------LFERKGSYYFWDDSKISQFVDQSDHGFIHRI 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P932953.4e-3748.95Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
P0C2F62.3e-2531.25Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A803PWX13.6e-7450.00Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PM685.2e-7350.00Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PV254.4e-7250.00Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803Q1549.8e-7249.38Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PPQ08.3e-7151.05Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_030505362.11.2e-6848.95uncharacterized protein LOC115720349 [Cannabis sativa][more]
ONI01138.11.5e-6346.28hypothetical protein PRUPE_6G123900 [Prunus persica][more]
VVA32947.13.4e-6346.28PREDICTED: retrotransposon [Prunus dulcis][more]
XP_042939444.14.5e-6346.53uncharacterized protein LOC122274474 [Carya illinoinensis][more]
XP_028062862.15.9e-6347.93uncharacterized protein LOC114266180 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
ATMG00310.12.4e-3848.95RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G29090.19.1e-3038.03Ribonuclease H-like superfamily protein [more]
AT3G09510.12.8e-1034.48Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 3..244
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 3..244

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy08g009770.1Lcy08g009770.1mRNA