Lcy08g009630 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g009630
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	BED-type domain-containing protein
Location	Chr08: 26482823 .. 26485530 (+)
RNA-Seq Expression	Lcy08g009630
Synteny	Lcy08g009630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATATTCAACTTTTGATATCACTTATCAGGTTGTGTGAAGGTGGAGAATTGCTAGGAAGAATAGTGTCAAGGTAAAAATGGTTTACTTCATTACTCTAAGAAAACATAGGTTAACTTGATTACTTTTTTGTTCAACTTGTCTTGCTTCCTTAGATTAATTCTCACTTGATTCTTAGTTTGCATTCTCTACCATGGATTTATTCAGAATGTGTTAGAATGGTGCTAGAGTTGATTGCATTGTTTCTTTATCTAAAATTTCTTGTCCAACCAATTTTTGTATACTAATCTGATATTTTAAATTGCTATTGTATTGGGTAGAAATTCTTTTGTCAAGTAGAAAATTTTACCATTCTAATTAGTTTTACAGCCGTCGAATTGGTTTTGGTGGAAGTTTGTATGGCTTTAGCTACAATTCTTCTTTTCCCAATCAAATTTCTTTTTCACTTGCTTCAAAACTTCATGTTTTTCTAATACATCTTATATAAACCAATTGAAATAAAGAAATTCACATAATATATTTAACTCAAAACCTACCTTCAGGGTACCCATTTGACGGAAGAGAATATCGCGGTCTCTTGTCAAATAAATTTATAATCCACGATTCATAAAGCTGACTTGTAACAGTAGTGGTCAGGGTCGATGATAGGAAACAATCGGTTTATTTCTAAATTCTTTTGTGTTTTTGAGGTAACCAAAAAAAGGGGGCTTTATAGATAAAAGATTAAGACATAAAGTAAAGACATGAAAATAAATAAGAAAAATTAAATGCAAGGAAAGTAAAGGTGGGGTTAGTTGATCTTACCACGAGGATCACCGTAATCGGGGTTGAACTCGGTGTTAAGTTTGATTAATTTCATTCATCGATTATCAATTGATTTTAATTAACTATCTAAGTCTGGCGTACTCCGGCAACAAACCGAGAGCCATGATCCAACTATCACAAACATGAAAACGCTAAGTTTGATTCTAGTTTAAATTAATTAATTAATATGCCTATTAACTAATCTAAACCCCATTGGGATCTAGCCGAATTAATTCACATGCAACGGGCAACAAACCACAATTACAATTGATTAAATCATTTAGTTCTAGGGACGCATGCGTATAATCATAACGTTAACCTATTTGCTACTTATATTTAGCAAGTAAATTTAGAGAGGGCGCGGTCAAGGTTGTCAATCTTTCCTACCACAATCTAAACTTATAGAAAAAGAACTAAAATCACAAAGACAATTAACTAAGTAATGAAGAATGGAAATCTCATAAAATTGAATCAAACTTACAAACCGAGGTCCCAATTACAACGATCCGAGCTTAGTTGGCCATAGACAATCACCCCAAAACTCGAGGCTCGATCAACCGACCCATGGACTAAGAAAACGTAAAAGAACTCTAGAAAAGTAAAGAGAAAGGTGGCTACAATATTGTATTGAGGGATTCAAGAAATGATTCTAAACCTACACCAAAGGCCTCTATTTATAGTGTTTCTTGGTCTTCAATTCGTGGCAGAATGGTGCTGAATTGGGTCTCTAAAGAAGTAAAATTTCCAGCCAAAATAGGAAAAATTTAAATCTGGAAAATTGTCTAGCGTCGCGACGCTGTGGATAGCGTCGCGACGCTGTCCCTTTAATTTTGGAAAATATCTCTCGAATTGCCCTAGCGTCTTGATGCTGTAGCGCCTCGACTCTGATGATGAGCGTCTCGACGCTACGACGGCTCCAGGGGCAGAATGGTCTTTTTACGCTCCGGTTTTGCTCGTTTTAGCCTCGAATTGCTTCCAAAGCTCCGGTGAGGACCTATAGACATATTATACTCATTTTAAAGCATTTTTCGCAAGGAATTCAACTAAGATAAGCAAATTGGGGGATTCTAAGGGCATAACAAATTAGACCGATCACCATTTCTTAGTACAAGGTGCAAAAAAGAGATGAGTAGAAGCCTACCATTACCAAAAGAAACCATAAAAGTAATAATACAAATGAATTGAAACTCAGAAGAACGCCAAAATAAATTCATGTACCCATTCCCCAATACTAAATTAGAGAAAGCCAATAAAAGCAACATTAGTTGGACCAAAAAGTCAAGAGGAAAGGTAGAGTAGAAACGAAGTTGAGTTTATAGTTATTAATGTTTGAGTTTATAGTTATTATTGGTTTTGCAATAGCTTCGTCTTGTTTTGTGAATTTTGGTTTGATTTTTATCCCAGGATGACTTCGTCTTTTAAAAATGAGACTTCTGAATAAAGTCATACCCCTAATCTAGGTACGAGTAGTAAAGTAGGATTGTTAGGGAAAAGGAAACCTACTAAACCAGCTTCAGATGCTTGGGAACATTTTATTAGAGTAGAAGGATGTGATCCTGAATATCTTAGGGCTGCTTGTAAATATTGTGGAGCTACATATGCATGTGACTCTAAGAGAAATGGGACAACAAATATGAAAAGACACTTAGAGAAATGTAAGACGTATACAAGTAAGTCAGAGGATTATGTTGAAGGAGAGGGGGATTCTGAAAGTAACTTGACAGCTGCATCTTTCACTCAAGAGAATTGTAGAATGATGCTTGCTTACATGGTCATATTAGATGAGTTACCCTTTAAGTTTGTAGAAAGCGAAGGATTTCATAAATTTTGCAGGGCATTAAATCCTAAGTTTGTAATTCCATCAAGAGTCACTGTTGCAAAAGATTGTTTTCAATGTACATGA

mRNA sequence

ATGTATATTCAACTTTTGATATCACTTATCAGGTTGTGTGAAGGTGGAGAATTGCTAGGAAGAATAGTGTCAAGCCGTCGAATTGGTTTTGGTGGAAGTACGAGTAGTAAAGTAGGATTGTTAGGGAAAAGGAAACCTACTAAACCAGCTTCAGATGCTTGGGAACATTTTATTAGAGTAGAAGGATGTGATCCTGAATATCTTAGGGCTGCTTGTAAATATTGTGGAGCTACATATGCATGTGACTCTAAGAGAAATGGGACAACAAATATGAAAAGACACTTAGAGAAATGTAAGACGTATACAAGTAAGTCAGAGGATTATGTTGAAGGAGAGGGGGATTCTGAAAGTAACTTGACAGCTGCATCTTTCACTCAAGAGAATTGTAGAATGATGCTTGCTTACATGGTCATATTAGATGAGTTACCCTTTAAGTTTGTAGAAAGCGAAGGATTTCATAAATTTTGCAGGGCATTAAATCCTAAGTTTGTAATTCCATCAAGAGTCACTGTTGCAAAAGATTGTTTTCAATGTACATGA

Coding sequence (CDS)

ATGTATATTCAACTTTTGATATCACTTATCAGGTTGTGTGAAGGTGGAGAATTGCTAGGAAGAATAGTGTCAAGCCGTCGAATTGGTTTTGGTGGAAGTACGAGTAGTAAAGTAGGATTGTTAGGGAAAAGGAAACCTACTAAACCAGCTTCAGATGCTTGGGAACATTTTATTAGAGTAGAAGGATGTGATCCTGAATATCTTAGGGCTGCTTGTAAATATTGTGGAGCTACATATGCATGTGACTCTAAGAGAAATGGGACAACAAATATGAAAAGACACTTAGAGAAATGTAAGACGTATACAAGTAAGTCAGAGGATTATGTTGAAGGAGAGGGGGATTCTGAAAGTAACTTGACAGCTGCATCTTTCACTCAAGAGAATTGTAGAATGATGCTTGCTTACATGGTCATATTAGATGAGTTACCCTTTAAGTTTGTAGAAAGCGAAGGATTTCATAAATTTTGCAGGGCATTAAATCCTAAGTTTGTAATTCCATCAAGAGTCACTGTTGCAAAAGATTGTTTTCAATGTACATGA

Protein sequence

MYIQLLISLIRLCEGGELLGRIVSSRRIGFGGSTSSKVGLLGKRKPTKPASDAWEHFIRVEGCDPEYLRAACKYCGATYACDSKRNGTTNMKRHLEKCKTYTSKSEDYVEGEGDSESNLTAASFTQENCRMMLAYMVILDELPFKFVESEGFHKFCRALNPKFVIPSRVTVAKDCFQCT

Homology

[Close]

BLAST of Lcy08g009630 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-08
Identity = 44/135 (32.59%), Postives = 61/135 (45.19%), Query Frame = 0


Query: 51  SDAWEHFIRVEGCDPEYLRAACKYCGAT--YACDSKRNGTTNMKRHLEKCKTYTSKSEDY 110
           S  WEHF  +E       RA+C  C  T  Y+C SK +GT+++KRH+        K+ED 
Sbjct: 109 SVVWEHF-TIEEMPGGVSRASCNLCKQTFAYSCGSKISGTSHLKRHITLASCPMLKNEDM 168

Query: 111 V-----------EGEGDSE---------SNLTAASFTQENCRMMLAYMVILDELPFKFVE 164
                       +GEG +E         +    A F Q+     LA M+IL + P   VE
Sbjct: 169 KLSLPLATVTNNDGEGCAERVAKRHYRSTGYANAMFDQDRTCSNLAKMIILHDYPLHIVE 228

[Close]

BLAST of Lcy08g009630 vs. ExPASy Swiss-Prot
Match: O75132 (Zinc finger BED domain-containing protein 4 OS=Homo sapiens OX=9606 GN=ZBED4 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 2.6e-04
Identity = 35/143 (24.48%), Postives = 60/143 (41.96%), Query Frame = 0


Query: 47  TKPASDAWEHFIRVEGCDPEYLRAACKYCGATYACDSKRN--GTTNMKRHLEKCKTYTSK 106
           +K  S  W HF     C  +  +  C +CG T +   K    GT+ + RHL++  +   K
Sbjct: 557 SKKTSKLWNHF---SICSADSTKVVCLHCGRTISRGKKPTNLGTSCLLRHLQRFHSNVLK 616

Query: 107 SEDYVEGEGDSESNLT--------AASFTQENCRM------------MLAYMVILDELPF 166
           +E        S             A+SF   N +             ++A M+ LD  P+
Sbjct: 617 TEVSETARPSSPDTRVPRGTELSGASSFDDTNEKFYDSHPVAKKITSLIAEMIALDLQPY 676

Query: 167 KFVESEGFHKFCRALNPKFVIPS 168
            FV++ GF++    L P++ +P+
Sbjct: 677 SFVDNVGFNRLLEYLKPQYSLPA 696

[Close]

BLAST of Lcy08g009630 vs. ExPASy TrEMBL
Match: A0A5A7SNJ1 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G001460 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.5e-63
Identity = 116/138 (84.06%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 40  LLGKRKPTKPASDAWEHFIRVEGCDPEYLRAACKYCGATYACDSKRNGTTNMKRHLEKCK 99
           +LGKRKP KP S  WEHFI+VEGCDP+Y RAACK+CGA+YACDSKRNGTTN+KRHLEKCK
Sbjct: 46  VLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRHLEKCK 105

Query: 100 TYTSKSEDYVEGEGDSESNLTAASFTQENCRMMLAYMVILDELPFKFVESEGFHKFCRAL 159
            Y +  ED VEGEGDSESNL  ASFTQENCR MLA MVILDELPFKFVESEGFH+FCRAL
Sbjct: 106 MYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL 165

Query: 160 NPKFVIPSRVTVAKDCFQ 178
           NPKFVIPSRVTVAKDCFQ
Sbjct: 166 NPKFVIPSRVTVAKDCFQ 183

[Close]

BLAST of Lcy08g009630 vs. ExPASy TrEMBL
Match: A0A5D3E4G3 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G001240 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.5e-63
Identity = 116/138 (84.06%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 40  LLGKRKPTKPASDAWEHFIRVEGCDPEYLRAACKYCGATYACDSKRNGTTNMKRHLEKCK 99
           +LGKRKP KP S  WEHFI+VEGCDP+Y RAACK+CGA+YACDSKRNGTTN+KRHLEKCK
Sbjct: 46  VLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRHLEKCK 105

Query: 100 TYTSKSEDYVEGEGDSESNLTAASFTQENCRMMLAYMVILDELPFKFVESEGFHKFCRAL 159
            Y +  ED VEGEGDSESNL  ASFTQENCR MLA MVILDELPFKFVESEGFH+FCRAL
Sbjct: 106 MYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL 165

Query: 160 NPKFVIPSRVTVAKDCFQ 178
           NPKFVIPSRVTVAKDCFQ
Sbjct: 166 NPKFVIPSRVTVAKDCFQ 183

[Close]

BLAST of Lcy08g009630 vs. ExPASy TrEMBL
Match: D0UIX2 (Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.5e-63
Identity = 116/138 (84.06%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 40  LLGKRKPTKPASDAWEHFIRVEGCDPEYLRAACKYCGATYACDSKRNGTTNMKRHLEKCK 99
           +LGKRKP KP S  WEHFI+VEGCDP+Y RAACK+CGA+YACDSKRNGTTN+KRHLEKCK
Sbjct: 18  VLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRHLEKCK 77

Query: 100 TYTSKSEDYVEGEGDSESNLTAASFTQENCRMMLAYMVILDELPFKFVESEGFHKFCRAL 159
            Y +  ED VEGEGDSESNL  ASFTQENCR MLA MVILDELPFKFVESEGFH+FCRAL
Sbjct: 78  MYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL 137

Query: 160 NPKFVIPSRVTVAKDCFQ 178
           NPKFVIPSRVTVAKDCFQ
Sbjct: 138 NPKFVIPSRVTVAKDCFQ 155

[Close]

BLAST of Lcy08g009630 vs. ExPASy TrEMBL
Match: A0A5D3C2L4 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00130 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.9e-62
Identity = 115/138 (83.33%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 40  LLGKRKPTKPASDAWEHFIRVEGCDPEYLRAACKYCGATYACDSKRNGTTNMKRHLEKCK 99
           +LGKRKP KP S  WEHFI+VEGCDP+Y RAACK+CG +YACDSKRNGTTN+KRHLEKCK
Sbjct: 18  VLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTTNLKRHLEKCK 77

Query: 100 TYTSKSEDYVEGEGDSESNLTAASFTQENCRMMLAYMVILDELPFKFVESEGFHKFCRAL 159
            Y +  ED VEGEGDSES+L AASFTQENCR MLA MVILDELPFKFVESEGFH+FCRAL
Sbjct: 78  MYVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL 137

Query: 160 NPKFVIPSRVTVAKDCFQ 178
           NPKFVIPSRVTVAKDCFQ
Sbjct: 138 NPKFVIPSRVTVAKDCFQ 155

[Close]

BLAST of Lcy08g009630 vs. ExPASy TrEMBL
Match: A0A5D3E590 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G001030 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.6e-60
Identity = 113/138 (81.88%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 40  LLGKRKPTKPASDAWEHFIRVEGCDPEYLRAACKYCGATYACDSKRNGTTNMKRHLEKCK 99
           +LGKRK  KP   AWEHFI+VEGCDP+Y RAACK+C A+YACDSKRNGTTN+KRHLEKCK
Sbjct: 18  VLGKRKLVKPPPSAWEHFIKVEGCDPKYPRAACKHCAASYACDSKRNGTTNLKRHLEKCK 77

Query: 100 TYTSKSEDYVEGEGDSESNLTAASFTQENCRMMLAYMVILDELPFKFVESEGFHKFCRAL 159
            Y +  ED VEGEGDSES+  AASFTQENCR MLA MVILDELPFKFVESEGFH+FCRAL
Sbjct: 78  MYVNPLEDNVEGEGDSESSSMAASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL 137

Query: 160 NPKFVIPSRVTVAKDCFQ 178
           NPKFVIPSRVTVAKDCFQ
Sbjct: 138 NPKFVIPSRVTVAKDCFQ 155

[Close]

BLAST of Lcy08g009630 vs. NCBI nr
Match: KAA0026183.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.6e-62
Identity = 116/138 (84.06%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 40  LLGKRKPTKPASDAWEHFIRVEGCDPEYLRAACKYCGATYACDSKRNGTTNMKRHLEKCK 99
           +LGKRKP KP S  WEHFI+VEGCDP+Y RAACK+CGA+YACDSKRNGTTN+KRHLEKCK
Sbjct: 46  VLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRHLEKCK 105

Query: 100 TYTSKSEDYVEGEGDSESNLTAASFTQENCRMMLAYMVILDELPFKFVESEGFHKFCRAL 159
            Y +  ED VEGEGDSESNL  ASFTQENCR MLA MVILDELPFKFVESEGFH+FCRAL
Sbjct: 106 MYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL 165

Query: 160 NPKFVIPSRVTVAKDCFQ 178
           NPKFVIPSRVTVAKDCFQ
Sbjct: 166 NPKFVIPSRVTVAKDCFQ 183

[Close]

BLAST of Lcy08g009630 vs. NCBI nr
Match: TYK30776.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.6e-62
Identity = 116/138 (84.06%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 40  LLGKRKPTKPASDAWEHFIRVEGCDPEYLRAACKYCGATYACDSKRNGTTNMKRHLEKCK 99
           +LGKRKP KP S  WEHFI+VEGCDP+Y RAACK+CGA+YACDSKRNGTTN+KRHLEKCK
Sbjct: 46  VLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRHLEKCK 105

Query: 100 TYTSKSEDYVEGEGDSESNLTAASFTQENCRMMLAYMVILDELPFKFVESEGFHKFCRAL 159
            Y +  ED VEGEGDSESNL  ASFTQENCR MLA MVILDELPFKFVESEGFH+FCRAL
Sbjct: 106 MYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL 165

Query: 160 NPKFVIPSRVTVAKDCFQ 178
           NPKFVIPSRVTVAKDCFQ
Sbjct: 166 NPKFVIPSRVTVAKDCFQ 183

[Close]

BLAST of Lcy08g009630 vs. NCBI nr
Match: ACX85638.1 (putative transposase [Cucumis melo])

HSP 1 Score: 250.0 bits (637), Expect = 1.6e-62
Identity = 116/138 (84.06%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 40  LLGKRKPTKPASDAWEHFIRVEGCDPEYLRAACKYCGATYACDSKRNGTTNMKRHLEKCK 99
           +LGKRKP KP S  WEHFI+VEGCDP+Y RAACK+CGA+YACDSKRNGTTN+KRHLEKCK
Sbjct: 18  VLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRHLEKCK 77

Query: 100 TYTSKSEDYVEGEGDSESNLTAASFTQENCRMMLAYMVILDELPFKFVESEGFHKFCRAL 159
            Y +  ED VEGEGDSESNL  ASFTQENCR MLA MVILDELPFKFVESEGFH+FCRAL
Sbjct: 78  MYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL 137

Query: 160 NPKFVIPSRVTVAKDCFQ 178
           NPKFVIPSRVTVAKDCFQ
Sbjct: 138 NPKFVIPSRVTVAKDCFQ 155

[Close]

BLAST of Lcy08g009630 vs. NCBI nr
Match: TYK06161.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 5.9e-62
Identity = 115/138 (83.33%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 40  LLGKRKPTKPASDAWEHFIRVEGCDPEYLRAACKYCGATYACDSKRNGTTNMKRHLEKCK 99
           +LGKRKP KP S  WEHFI+VEGCDP+Y RAACK+CG +YACDSKRNGTTN+KRHLEKCK
Sbjct: 18  VLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTTNLKRHLEKCK 77

Query: 100 TYTSKSEDYVEGEGDSESNLTAASFTQENCRMMLAYMVILDELPFKFVESEGFHKFCRAL 159
            Y +  ED VEGEGDSES+L AASFTQENCR MLA MVILDELPFKFVESEGFH+FCRAL
Sbjct: 78  MYVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL 137

Query: 160 NPKFVIPSRVTVAKDCFQ 178
           NPKFVIPSRVTVAKDCFQ
Sbjct: 138 NPKFVIPSRVTVAKDCFQ 155

[Close]

BLAST of Lcy08g009630 vs. NCBI nr
Match: TYK30761.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 9.5e-60
Identity = 113/138 (81.88%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 40  LLGKRKPTKPASDAWEHFIRVEGCDPEYLRAACKYCGATYACDSKRNGTTNMKRHLEKCK 99
           +LGKRK  KP   AWEHFI+VEGCDP+Y RAACK+C A+YACDSKRNGTTN+KRHLEKCK
Sbjct: 18  VLGKRKLVKPPPSAWEHFIKVEGCDPKYPRAACKHCAASYACDSKRNGTTNLKRHLEKCK 77

Query: 100 TYTSKSEDYVEGEGDSESNLTAASFTQENCRMMLAYMVILDELPFKFVESEGFHKFCRAL 159
            Y +  ED VEGEGDSES+  AASFTQENCR MLA MVILDELPFKFVESEGFH+FCRAL
Sbjct: 78  MYVNPLEDNVEGEGDSESSSMAASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL 137

Query: 160 NPKFVIPSRVTVAKDCFQ 178
           NPKFVIPSRVTVAKDCFQ
Sbjct: 138 NPKFVIPSRVTVAKDCFQ 155

The following BLAST results are available for this feature:

BLAST of Lcy08g009630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q75HY5	1.8e-08	32.59	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
O75132	2.6e-04	24.48	Zinc finger BED domain-containing protein 4 OS=Homo sapiens OX=9606 GN=ZBED4 PE=...	[more]

BLAST of Lcy08g009630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SNJ1	7.5e-63	84.06	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G...	[more]
A0A5D3E4G3	7.5e-63	84.06	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343...	[more]
D0UIX2	7.5e-63	84.06	Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1	[more]
A0A5D3C2L4	2.9e-62	83.33	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287...	[more]
A0A5D3E590	4.6e-60	81.88	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343...	[more]

BLAST of Lcy08g009630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026183.1	1.6e-62	84.06	putative transposase [Cucumis melo var. makuwa]	[more]
TYK30776.1	1.6e-62	84.06	putative transposase [Cucumis melo var. makuwa]	[more]
ACX85638.1	1.6e-62	84.06	putative transposase [Cucumis melo]	[more]
TYK06161.1	5.9e-62	83.33	putative transposase [Cucumis melo var. makuwa]	[more]
TYK30761.1	9.5e-60	81.88	putative transposase [Cucumis melo var. makuwa]	[more]

BLAST of Lcy08g009630 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00614	bed5	coord: 48..101 e-value: 2.2E-12 score: 57.1
None	No IPR available	PANTHER	PTHR34396:SF1	OS03G0264950 PROTEIN	coord: 39..170
None	No IPR available	PANTHER	PTHR34396	OS03G0264950 PROTEIN-RELATED	coord: 39..170
None	No IPR available	SUPERFAMILY	140996	Hermes dimerisation domain	coord: 124..176
IPR003656	Zinc finger, BED-type	PFAM	PF02892	zf-BED	coord: 51..97 e-value: 3.9E-8 score: 33.1
IPR003656	Zinc finger, BED-type	PROSITE	PS50808	ZF_BED	coord: 48..105 score: 11.515068
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 51..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g009630.1	Lcy08g009630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009791	post-embryonic development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046983	protein dimerization activity