Lcy08g009140 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGCCACGTTTTGGTGGGGTACCACAGATGCACGGAAGAAATTACACTGGAAGAAATGGGAGTTTATGTGTCTTCCGAAGGAGATGGGAGGTTTGAACTTTAGAGACTTGATCTCCTTTAATCGCTCATTATTGGCAAAACAGGTTTGGCGTTTTCTCAAAAATCCACATTTATTAGCTTCTAGAGTTATCTTAGGGAGATATGCATACTAAGCATCGATATTAACGACCCCTCTTAAATCTAATAGTTCCATTTTCTGGAGAGGTTTTGTTTGGGCCCGTGAGTTGATCTTGAGGGGTATTCGAAAACGGGTTGGAAATGGTAATTCCATCAGATTTTTTGAAGACCCATGGATCCCAAAGGAAGTCACTTTTAAACCGATGCGGAACCATAATCAGGTGATGCAAGGCGTGCTTACGGTTGCTGATTTTCTTACTACATCTTATAGGTGGGACATGGAGAAGATCCGAAATGTGGTTACAGAAGAGATGCACCGGTGATCCAATCTATCCTGATAGGAGGGCCAAATGAGATGGATGCATGGATATGGCACTACTCACGGAATGGTGAGTATTCTACCAAGAGTGGATACAAGTTAGAGATGAATCGTAATGTGCATCAAGCCTCTACAAGTGTCAATGCTCATAATGTTTGGTGGAGGAAAGTGTGGAAAATGAAGATACCGTCAAAAATAAAATTATTTATATGGAAAGCCTATCATGGGTGCTTGCCAACGAATTATTGTCTCTGGAAGTGTGGTATGGATGTGTTAAGTCTCTACAGTGTTTGTGGGAGTGAGATGGAAAGTATAGATCATGCTCTTTGTGGTTGCAAGCGTGCTAAAGAAATTTGTGATATGATGTTTCCACGTGTTGATGTTGATATATTTGTGGCTGACAATTTTGCAAACAGAATCCTAAGACTGGCGGACCATCTTAGCATGGAGGTTTTTGAAAAAACATGTATTACTTTCTGGGCAATATGGAATGATAGGAATAATTTCATTTTTCAACAGCCTCTTATGGAATTGTCTGCTCGGTGTGATTGGATTCATAAGTACTGAGAGGATACTCGACAACGATCAGCACTGATTGCAACTCATCTAGACGAGTCTCGGGTCTACCACGTTGCGATGCATGCTTGAACAAGGGTGTTTACAGATGCAGCTGTTCGGCAGTATAAAGTAGGTGTTGGGTATGGGATGGTCATTGTTAACGAGGACGATACCTTGCAGAGCGCCTTGCATATGTTTGAGAACAGGTCTTTGTCGCCATTGGCTGTAGAAGTGCAAGCCATTCTGCAAGCTGTAACGTTATTGATGCGCATGCATATTGCTGAGGTTGTGTTGCACTCAGATTCTTTAAGTGCCCTTAGGATGATTAATGGGGAGCAGGAGCCAAATTCAGAGGTACATTTTTGGATCCTGCAAATTAAGGAATTGAGTAAAACGTTTACTTCTCTGATATATGTCCATGTTGGAAGATCGAGTAATGGAAGGGCGGATGCTTTAGCAAAATATGCTCTCCAAAGCACACAATCTATGTTGTGGCTATCTAATTTCCCTATTTGGCTAGTGTCAATGGGACCAAATGTCCATTGTAAATGTATTAATGTTTGTTCTTGCAATTCCTAATAAAGATCTCGTTTCTTATAAAAAAAAAAATTAAAAAAAAAAAAAACAATGGAAGAGAAAGTTTCTTGCCAGAGCTCCTTCTAAATATAGCTATAGATAGATCTGTATTTGCCACTATTAGATTTTTTAATTTTTTTTTTTTTTTAAGAAACTGTTAGAACTTTTTCTTGGACGGATCAAAGCCAGCCATCAATCTATCCATTTTCCTACCTACGTTATTGATCTAGTAAAATTTAATCATAAAATAATATTTCCAGTCAAGGTTTGACCTTACGATCACTTGATATGATATTTTTTTTTTTTTTTTTGAAAAACAATTGATATGATATTATGATATCTAGTTTCTCATTTTTTTTCAAAAAAAGATCTGGTTTATCATTTTAAATAAGAGAATGCGATATGATGGTTGAAATAAGTGTTAGAATAATCCATAATCCAAAAAATATGAAGCAAAATAACATTATAAACATGCCAAAGTAAAATTTTTACTCTTATAAACCTATTGTATTATTATCAATCATGAAATCAAATCAAATCAAGAAATTAGTTTATACTTCAATTCAAGTCGACACATCTCTAATTGATCAATAAAATATTTTATTGTGTGGTACATCATAAAATTGAATCCAAAATTTTATAGAATAAAGTAAATATTTTCAAAGTTAGAGAACAACTGTAAATAACATAAATCTGGTAACTCAATCATAAATATATTTGAAATTTGTTGAATAAAATAATAAAAATGATTGAATATACATACATGCATATTTATTGAAGAGCATGGGAATGGTTTAAATAAATAAAACATAATAGGTATACAACACACATACACAATTGAATATCGAAAGTCATATTGTCGAGGATTCCACGTTGAAAAGATAAGTGGAGACCTCATAATTTATAAGATGTATGGGTTACTCCACTCATTGTCAATTGATTTTGAGATTGAACTTCATGTTATATAATATGGTATCAGAGTCCATAAAACCCAAACGGATATTCGGTCCAAGAAATAAAAATTGGGATCCGAGAGGACATTGAGATAGAACCCATGTTAATCTAATACATATGATTTTGAAAATATATATTTTAATTTGAAGAGCATATGAATGATTGAATAAGATGGGAATATATTCATGGTAACTACCCAAATTTTTCCTTCCAAAAAAAAATATATGGGAATATATTCTTTGGAAAAAAACAAAGATGGGAATATATAATTTGTAGGAAACGTGAATGAAAAGTAGTTGTTGGGGGCAAAAGCCATTAATTTTAATTCCTACCAAAGGTGGTTGGTGGAGGCAAAAACCATTAATTTAATTAAAGAACAACAAGTTGAAACCTTAAAATAGAAAGAAAATGGAAATATCTTAACTTATAACTATATATCAATAGGTCAGAAGTATTGTTTAA ATGATGGCCACGTTTTGGTGGGGTACCACAGATGCACGGAAGAAATTACACTGGAAGAAATGGGAGTTTATGTGTCTTCCGAAGGAGATGGGAGGTTTGAACTTTAGAGACTTGATCTCCTTTAATCGCTCATTATTGGCAAAACAGGTGGGACATGGAGAAGATCCGAAATGTGGTTACAGAAGAGATGCACCGGTGATCCAATCTATCCTGATAGGAGGGCCAAATGAGATGGATGCATGGATATGGCACTACTCACGGAATGGTGAGTATTCTACCAAGAGTGGATACAAGTTAGAGATGAATCGTAATGTGCATCAAGCCTCTACAAGTGTCAATGCTCATAATGTTTGGTGGAGGAAAGTGTGGAAAATGAAGATACCGTCAAAAATAAAATTATTTATATGGAAAGCCTATCATGGGTGCTTGCCAACGAATTATTGTCTCTGGAAGTGTGGTATGGATGTGTTAAGTCTCTACAGTGTTTGTGGGAGTGAGATGGAAAGTATAGATCATGCTCTTTGTGGTTGCAAGCGTGCTAAAGAAATTTGTGATATGATGTTTCCACGTGTTGATGTTGATATATTTGTGGCTGACAATTTTGCAAACAGAATCCTAAGACTGGCGGACCATCTTAGCATGGAGGTTTTTGAAAAAACATGTATTACTTTCTGGGCAATATGGAATGATAGGAATAATTTCATTTTTCAACAGCCTCTTATGGAATTGTCTGCTCGGGTGTTTACAGATGCAGCTGTTCGGCAGTATAAAGTAGGTGTTGGGTATGGGATGGTCATTGTTAACGAGGACGATACCTTGCAGAGCGCCTTGCATATGTTTGAGAACAGGTCTTTGTCGCCATTGGCTGTAGAAGTGCAAGCCATTCTGCAAGCTGTAACGTTATTGATGCGCATGCATATTGCTGAGGTTGTGTTGCACTCAGATTCTTTAAGTGCCCTTAGGATGATTAATGGGGAGCAGGAGCCAAATTCAGAGGTCAGAAGTATTGTTTAA ATGATGGCCACGTTTTGGTGGGGTACCACAGATGCACGGAAGAAATTACACTGGAAGAAATGGGAGTTTATGTGTCTTCCGAAGGAGATGGGAGGTTTGAACTTTAGAGACTTGATCTCCTTTAATCGCTCATTATTGGCAAAACAGGTGGGACATGGAGAAGATCCGAAATGTGGTTACAGAAGAGATGCACCGGTGATCCAATCTATCCTGATAGGAGGGCCAAATGAGATGGATGCATGGATATGGCACTACTCACGGAATGGTGAGTATTCTACCAAGAGTGGATACAAGTTAGAGATGAATCGTAATGTGCATCAAGCCTCTACAAGTGTCAATGCTCATAATGTTTGGTGGAGGAAAGTGTGGAAAATGAAGATACCGTCAAAAATAAAATTATTTATATGGAAAGCCTATCATGGGTGCTTGCCAACGAATTATTGTCTCTGGAAGTGTGGTATGGATGTGTTAAGTCTCTACAGTGTTTGTGGGAGTGAGATGGAAAGTATAGATCATGCTCTTTGTGGTTGCAAGCGTGCTAAAGAAATTTGTGATATGATGTTTCCACGTGTTGATGTTGATATATTTGTGGCTGACAATTTTGCAAACAGAATCCTAAGACTGGCGGACCATCTTAGCATGGAGGTTTTTGAAAAAACATGTATTACTTTCTGGGCAATATGGAATGATAGGAATAATTTCATTTTTCAACAGCCTCTTATGGAATTGTCTGCTCGGGTGTTTACAGATGCAGCTGTTCGGCAGTATAAAGTAGGTGTTGGGTATGGGATGGTCATTGTTAACGAGGACGATACCTTGCAGAGCGCCTTGCATATGTTTGAGAACAGGTCTTTGTCGCCATTGGCTGTAGAAGTGCAAGCCATTCTGCAAGCTGTAACGTTATTGATGCGCATGCATATTGCTGAGGTTGTGTTGCACTCAGATTCTTTAAGTGCCCTTAGGATGATTAATGGGGAGCAGGAGCCAAATTCAGAGGTCAGAAGTATTGTTTAA MMATFWWGTTDARKKLHWKKWEFMCLPKEMGGLNFRDLISFNRSLLAKQVGHGEDPKCGYRRDAPVIQSILIGGPNEMDAWIWHYSRNGEYSTKSGYKLEMNRNVHQASTSVNAHNVWWRKVWKMKIPSKIKLFIWKAYHGCLPTNYCLWKCGMDVLSLYSVCGSEMESIDHALCGCKRAKEICDMMFPRVDVDIFVADNFANRILRLADHLSMEVFEKTCITFWAIWNDRNNFIFQQPLMELSARVFTDAAVRQYKVGVGYGMVIVNEDDTLQSALHMFENRSLSPLAVEVQAILQAVTLLMRMHIAEVVLHSDSLSALRMINGEQEPNSEVRSIV Homology
BLAST of Lcy08g009140 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.4e-06 Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of Lcy08g009140 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 4.5e-05 Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0
BLAST of Lcy08g009140 vs. ExPASy TrEMBL
Match: A0A803PYI0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 4.2e-38 Identity = 104/351 (29.63%), Postives = 175/351 (49.86%), Query Frame = 0
BLAST of Lcy08g009140 vs. ExPASy TrEMBL
Match: A0A803QHJ7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 7.9e-37 Identity = 106/344 (30.81%), Postives = 167/344 (48.55%), Query Frame = 0
BLAST of Lcy08g009140 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 5.1e-36 Identity = 122/460 (26.52%), Postives = 176/460 (38.26%), Query Frame = 0
BLAST of Lcy08g009140 vs. ExPASy TrEMBL
Match: A0A803Q185 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 1.9e-35 Identity = 127/473 (26.85%), Postives = 195/473 (41.23%), Query Frame = 0
BLAST of Lcy08g009140 vs. ExPASy TrEMBL
Match: A0A803NI87 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 3.3e-35 Identity = 107/428 (25.00%), Postives = 176/428 (41.12%), Query Frame = 0
BLAST of Lcy08g009140 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 161.8 bits (408), Expect = 1.1e-35 Identity = 122/460 (26.52%), Postives = 176/460 (38.26%), Query Frame = 0
BLAST of Lcy08g009140 vs. NCBI nr
Match: XP_030505962.1 (uncharacterized protein LOC115720894 [Cannabis sativa]) HSP 1 Score: 159.1 bits (401), Expect = 6.8e-35 Identity = 107/428 (25.00%), Postives = 176/428 (41.12%), Query Frame = 0
BLAST of Lcy08g009140 vs. NCBI nr
Match: XP_030509188.1 (uncharacterized protein LOC115723863 [Cannabis sativa]) HSP 1 Score: 157.1 bits (396), Expect = 2.6e-34 Identity = 89/291 (30.58%), Postives = 129/291 (44.33%), Query Frame = 0
BLAST of Lcy08g009140 vs. NCBI nr
Match: XP_030496655.1 (uncharacterized protein LOC115712508 [Cannabis sativa]) HSP 1 Score: 153.7 bits (387), Expect = 2.9e-33 Identity = 98/353 (27.76%), Postives = 159/353 (45.04%), Query Frame = 0
BLAST of Lcy08g009140 vs. NCBI nr
Match: XP_030479133.1 (uncharacterized protein LOC115696372 [Cannabis sativa]) HSP 1 Score: 147.1 bits (370), Expect = 2.7e-31 Identity = 92/336 (27.38%), Postives = 127/336 (37.80%), Query Frame = 0
BLAST of Lcy08g009140 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 55.5 bits (132), Expect = 9.9e-08 Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of Lcy08g009140 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 2.2e-07 Identity = 20/50 (40.00%), Postives = 31/50 (62.00%), Query Frame = 0
BLAST of Lcy08g009140 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 52.4 bits (124), Expect = 8.4e-07 Identity = 31/128 (24.22%), Postives = 55/128 (42.97%), Query Frame = 0
BLAST of Lcy08g009140 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 46.2 bits (108), Expect = 6.0e-05 Identity = 31/130 (23.85%), Postives = 50/130 (38.46%), Query Frame = 0
BLAST of Lcy08g009140 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 43.9 bits (102), Expect = 3.0e-04 Identity = 23/66 (34.85%), Postives = 32/66 (48.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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